ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart60f05 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 238 bits (607), Expect = 5e-63 Identities = 111/118 (94%), Positives = 115/118 (97%) Frame = +1 Query: 91 MAGTVTVPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIK 270 MAGTVTVPGSS PSTPLLKDELDIVIPTIRNLDFLEMWR FFQPYHLIIVQDGDP+K IK Sbjct: 1 MAGTVTVPGSSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIK 60 Query: 271 VPEGFDYDLYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKD 444 VPEGFDY+LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKD Sbjct: 61 VPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKD 118
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 221 bits (563), Expect = 6e-58 Identities = 103/110 (93%), Positives = 106/110 (96%) Frame = +1 Query: 115 GSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYD 294 GSSV TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK I VPEGFDY+ Sbjct: 3 GSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYE 62 Query: 295 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKD 444 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKD Sbjct: 63 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKD 112
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 217 bits (553), Expect = 9e-57 Identities = 100/105 (95%), Positives = 104/105 (99%) Frame = +1 Query: 130 STPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYDLYNRN 309 +TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK IKVPEGFDY+LYNRN Sbjct: 4 ATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRN 63 Query: 310 DINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKD 444 DINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKD Sbjct: 64 DINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKD 108
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 213 bits (543), Expect = 1e-55 Identities = 100/110 (90%), Positives = 106/110 (96%), Gaps = 1/110 (0%) Frame = +1 Query: 118 SSVPS-TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYD 294 +S+P TPLLKDELDIVIPTIRNLDFLEMWRPFF+ YHLIIVQDGDPSK IKVPEGFDY+ Sbjct: 2 ASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYE 61 Query: 295 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKD 444 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKD Sbjct: 62 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKD 111
>S23IP_HUMAN (Q9Y6Y8) SEC23-interacting protein (p125)| Length = 1000 Score = 32.7 bits (73), Expect = 0.41 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Frame = +1 Query: 67 IEIPGQEAMAGTVTVPGSSVPSTPLLKDELDIVIP---TIRNLDFLEMWRPF--FQPYHL 231 ++ P Q+ + P VPS LL+++ + V P + +++ ++W PF F +L Sbjct: 237 VQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNL 296 Query: 232 IIVQDG---DPSKAIKVPEGFDYDLY 300 + + DP + +G YD+Y Sbjct: 297 EEIYNSVQPDPESVVLGTDGGRYDVY 322
>YCBL_BACSU (P42244) Hypothetical sensory transduction protein ycbL| Length = 226 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 154 LDIVIPTIRNLDFLEMWRPFFQ-PYHLIIVQDGDPSKAIKVPEGFD 288 LDI++P + +DFL++ R P +I +DGD KA+ + G D Sbjct: 47 LDIMLPKLNGMDFLKIIREKSNIPVLMISAKDGDVDKALGLGFGAD 92
>NUSG_BUCAP (Q8KA65) Transcription antitermination protein nusG| Length = 181 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = +1 Query: 109 VPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFD 288 + G S +P+ E+DI+I +R + + F+P +I V DG + V E D Sbjct: 93 IGGKSDKPSPISDKEVDIIINRLRQIGDKPRPKTLFEPGEMIRVNDGPFADFNGVVEEVD 152 Query: 289 YD 294 Y+ Sbjct: 153 YE 154
>PLSX_SALTY (P0A259) Fatty acid/phospholipid synthesis protein plsX| Length = 359 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = +1 Query: 100 TVTVPGS------SVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK 261 +VTVP + + T LL DI+ P + DF + R P +I D PS+ Sbjct: 18 SVTVPAALQALNANSQLTLLLVGNPDIITPLLAKADFEQRSRLQIIPAQSVIASDARPSQ 77 Query: 262 AIKVPEG 282 AI+ G Sbjct: 78 AIRASRG 84
>PLSX_SALTI (P0A260) Fatty acid/phospholipid synthesis protein plsX| Length = 359 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = +1 Query: 100 TVTVPGS------SVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK 261 +VTVP + + T LL DI+ P + DF + R P +I D PS+ Sbjct: 18 SVTVPAALQALNANSQLTLLLVGNPDIITPLLAKADFEQRSRLQIIPAQSVIASDARPSQ 77 Query: 262 AIKVPEG 282 AI+ G Sbjct: 78 AIRASRG 84
>MUT7_CAEEL (P34607) Probable exonuclease mut-7 (EC 3.1.-.-)| Length = 910 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +1 Query: 64 EIEIPGQEAMAGTVTVPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLII 237 EIE G E + +TVP S + + D I IP + N+ ++ FF +++ I Sbjct: 702 EIERVGGEHLRHIITVPSKSYEALKMDYDNYTIAIPELNNMSPVDQLIEFFDLFNVDI 759
>SLO_DROME (Q03720) Calcium-activated potassium channel slowpoke (Maxi K| channel) (MaxiK) (BK channel) (dSlo) Length = 1200 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = +1 Query: 4 DLSLLPHPYHRLLEQLDPGLEIEIPGQEAMAG 99 D SLLP +L Q DPGLE + P A AG Sbjct: 1147 DFSLLPTDQVFVLMQFDPGLEYKPPAVRAPAG 1178
>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I| Length = 638 Score = 29.6 bits (65), Expect = 3.5 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Frame = +1 Query: 25 PYHRLLEQLDPGLEIEIPGQEAMAGTVT----VPG--SSVPSTPLLKDELDIVIPTIRNL 186 PY +LL + ++E P + + T VP SS+ STP +K + IPTI + Sbjct: 251 PYDQLLAIKNQLAQLEKPASPSTSSVATSAPSVPSALSSISSTPFMKPSIPSTIPTIPSA 310 Query: 187 --DFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYDLYNRN 309 + P Y V G S + G LYN N Sbjct: 311 YSASVSSQPPLTHSY----VHPGPQSHKYSLSSGPPASLYNAN 349
>G6PI_BURS3 (Q39FF4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 540 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +1 Query: 49 LDPGLEIEIPGQEAMAGTVTVPGSSVPSTPLLKDEL 156 LD ++ PG+EA+A +T PG+ P+T LL D L Sbjct: 432 LDEARKVAGPGKEALAPHLTFPGNR-PTTTLLVDAL 466
>NUSG_BUCAI (P57151) Transcription antitermination protein nusG| Length = 181 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +1 Query: 109 VPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFD 288 + G S +P+ E++I+I +R + + F+P +I V DG + V E D Sbjct: 93 IGGKSDKPSPISDKEVEIIINRLRKIGNKPRPKTLFEPGEMIRVNDGPFADFNGVVEEVD 152 Query: 289 YD 294 Y+ Sbjct: 153 YE 154
>PLSX_PHOLL (Q7N383) Fatty acid/phospholipid synthesis protein plsX| Length = 345 Score = 28.9 bits (63), Expect = 5.9 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 10/76 (13%) Frame = +1 Query: 85 EAMAGT----VTVPGS--SVPSTPLLKDEL----DIVIPTIRNLDFLEMWRPFFQPYHLI 234 +AM+G VTVP + ++ S P LK L DI+ P + N D + R P + Sbjct: 9 DAMSGDFGPRVTVPAALQALASNPRLKLLLVGIPDIISPMLVNSDTELLSRLQLVPAERV 68 Query: 235 IVQDGDPSKAIKVPEG 282 + D PS+AI+ G Sbjct: 69 VANDAKPSQAIRNSRG 84
>KCC4_YEAST (P25389) Probable serine/threonine-protein kinase KCC4 (EC| 2.7.11.1) Length = 1037 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +1 Query: 28 YHRLLEQLDPGLEIEIPGQEAMAGTVTVPGSSVPSTPLLKDELDIVIPTIRNLDFL 195 Y R + +LDPGL T T+P + T LL+D +I TIR FL Sbjct: 618 YTRPISRLDPGLT---------PVTETLPNNLKEKTALLQDTEKKIIETIRRSKFL 664 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,873,171 Number of Sequences: 219361 Number of extensions: 808840 Number of successful extensions: 3024 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2968 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3022 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
