Clone Name | bart60f03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YG54_YEAST (P53309) Hypothetical 64.3 kDa protein in PFK1-TDS4 i... | 30 | 1.4 | 2 | ANKR5_MOUSE (Q9D2J7) Ankyrin repeat domain-containing protein 5 | 28 | 4.1 | 3 | HN1L_MOUSE (Q6PGH2) Hematological and neurological expressed 1-l... | 27 | 9.1 |
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>YG54_YEAST (P53309) Hypothetical 64.3 kDa protein in PFK1-TDS4 intergenic| region Length = 568 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -2 Query: 378 RLGGRNPTELDLSGRDRRLEGFQNAPNP 295 + G NP L+ R+++ + FQN+PNP Sbjct: 448 KTGSNNPFSLENIAREQQQQNFQNSPNP 475
>ANKR5_MOUSE (Q9D2J7) Ankyrin repeat domain-containing protein 5| Length = 775 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = -1 Query: 364 KSNRIGSFGPRQTPRGIPKRPQ 299 KS +GSFGP++ RG+ K+P+ Sbjct: 404 KSYVLGSFGPKKKKRGLGKKPR 425
>HN1L_MOUSE (Q6PGH2) Hematological and neurological expressed 1-like protein| (HN1-like protein) Length = 190 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Frame = -1 Query: 364 KSNRIGS--FGPRQTPRGIPKRPQSKAG 287 K NR+ S FGP + P+ IPKR G Sbjct: 39 KPNRMASNIFGPTEEPKNIPKRTNPPGG 66 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,222,334 Number of Sequences: 219361 Number of extensions: 577750 Number of successful extensions: 1828 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1828 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)