ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60f01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transporter (stp2 gene) Length = 2516 Score = 234 bits (118), Expect = 2e-58 Identities = 154/162 (95%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 142 tcctccatcctcgccgcagacgggaggaacgccgcgctcgccaccctcggcaacctcgcc 201 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 161 tcctccatcctcgccgcagacgggaggaccgccgcgctcgccaccctcggcaacctcgcc 102 Query: 202 aggacctccaccctccccgccggatactcccactcccac-cacgccaaggacgcatcct- 259 |||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||| Sbjct: 101 aggacctccaccctccccgccgcatactcccactcccacacacgcgaaggccgcatcctc 42 Query: 260 cccacggctacgcatggatcgcagccatcccaaccgcagcct 301 ||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 41 cccacgg-tacgcatggatcgcagccatcccagccgcagcct 1 Score = 188 bits (95), Expect = 9e-45 Identities = 98/99 (98%) Strand = Plus / Minus Query: 15 gttggacgcaaggaagacgagtttcgccgccgccgccatgacgagctcctcctcctccaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 gttggacgcaaggaagacgagtttcgccgccgccgccatgacgagctcctcctcctccaa 230 Query: 75 gctcttccactccgcctgcaaggccgccaggtccttcct 113 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 229 gctcttccactccgcctgcaaggccgccaggtctttcct 191
>gb|AF191098.1|AF191098 Pisum sativum nucleoside diphosphate kinase (ndpk) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1044 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 295 gcagcctacatgctccagggtcaggacgtgcatgccgacgagatggagcgcaccttcatc 354 ||||| ||||||||||| | |||||| |||||||| | |||| |||||||||| ||||| Sbjct: 260 gcagcttacatgctccaagatcaggaggtgcatgctgccgagctggagcgcactttcatt 319 Query: 355 gccatcaagcc 365 ||||||||||| Sbjct: 320 gccatcaagcc 330
>ref|XM_476035.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 65.9 bits (33), Expect = 9e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 301 tacatgctccagggtcaggacgtgcatgccgacgagatggagcgcaccttcatcgccatc 360 |||||||| |||| |||||| | |||||| | ||||||||||||||||| ||||||||| Sbjct: 229 tacatgctacaggatcaggaggcgcatgctgcagagatggagcgcacctttatcgccatc 288 Query: 361 aagcc 365 ||||| Sbjct: 289 aagcc 293
>dbj|AK061858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G07, full insert sequence Length = 1080 Score = 65.9 bits (33), Expect = 9e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 301 tacatgctccagggtcaggacgtgcatgccgacgagatggagcgcaccttcatcgccatc 360 |||||||| |||| |||||| | |||||| | ||||||||||||||||| ||||||||| Sbjct: 309 tacatgctacaggatcaggaggcgcatgctgcagagatggagcgcacctttatcgccatc 368 Query: 361 aagcc 365 ||||| Sbjct: 369 aagcc 373
>dbj|AK066391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067E14, full insert sequence Length = 1213 Score = 65.9 bits (33), Expect = 9e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 301 tacatgctccagggtcaggacgtgcatgccgacgagatggagcgcaccttcatcgccatc 360 |||||||| |||| |||||| | |||||| | ||||||||||||||||| ||||||||| Sbjct: 446 tacatgctacaggatcaggaggcgcatgctgcagagatggagcgcacctttatcgccatc 505 Query: 361 aagcc 365 ||||| Sbjct: 506 aagcc 510
>gb|BT017115.1| Zea mays clone EL01N0363H10.c mRNA sequence Length = 822 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 301 tacatgctccagggtcaggacgtgcatgccgacgagatggagcgcaccttcatcgccatc 360 ||||||||||||| ||||| | ||||| | |||||||||||||| |||||||||||| Sbjct: 618 tacatgctccaggaccaggaggctcatgctgcagagatggagcgcactttcatcgccatc 559 Query: 361 aagcccga 368 |||||||| Sbjct: 558 aagcccga 551
>gb|DQ215035.1| Taeniopygia guttata clone 0058P0031C09 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 645 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 67 gagcgcaccttcatcgccatcaagcccga 95
>gb|DQ215034.1| Taeniopygia guttata clone 0058P0024B11 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 677 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 98 gagcgcaccttcatcgccatcaagcccga 126
>gb|DQ215039.1| Taeniopygia guttata clone 0058P0028E06 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 646 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 67 gagcgcaccttcatcgccatcaagcccga 95
>gb|DQ215038.1| Taeniopygia guttata clone 0058P0001H07 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 658 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 64 gagcgcaccttcatcgccatcaagcccga 92
>gb|DQ215037.1| Taeniopygia guttata clone 0065P0005G12 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 624 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 45 gagcgcaccttcatcgccatcaagcccga 73
>gb|DQ215036.1| Taeniopygia guttata clone 0061P0021A02 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 642 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 63 gagcgcaccttcatcgccatcaagcccga 91
>ref|XM_420097.1| PREDICTED: Gallus gallus similar to nucleoside diphosphate kinase (LOC422094), mRNA Length = 1871 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 250 gagcgcaccttcatcgccatcaagcccga 278
>ref|NM_205047.1| Gallus gallus non-metastatic cells 2, protein (NM23B) expressed in (NME2), mRNA Length = 638 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 67 gagcgcaccttcatcgccatcaagcccga 95
>gb|AY107877.1| Zea mays PCO069028 mRNA sequence Length = 1303 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 301 tacatgctccagggtcaggacgtgcatgccgacgagatggagcgcaccttcatcgccatc 360 ||||||||||||| ||||| | ||||| | |||||||||||||||||||| |||||| Sbjct: 450 tacatgctccaggaccaggaggctcatgctgcagagatggagcgcaccttcattgccatc 509 Query: 361 aagcc 365 ||||| Sbjct: 510 aagcc 514
>gb|AF043542.1|AF043542 Gallus gallus nucleoside diphosphate kinase (cNDPK) mRNA, complete cds Length = 638 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 ||||||||||||||||||||||||||||| Sbjct: 67 gagcgcaccttcatcgccatcaagcccga 95
>gb|BC107894.1| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in, mRNA (cDNA clone MGC:111212 IMAGE:6717551), complete cds Length = 1225 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 609 tggagcgcaccttcatcgccatcaagcc 636
>ref|NM_001018136.1| Homo sapiens NM23-LV (NME1-NME2), mRNA Length = 1107 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 464 tggagcgcaccttcatcgccatcaagcc 491
>gb|BC064988.1| Homo sapiens cDNA clone IMAGE:4859607, **** WARNING: chimeric clone **** Length = 3305 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 2697 tggagcgcaccttcatcgccatcaagcc 2724
>gb|BT007776.1| Synthetic construct Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in mRNA, partial cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|BT007045.1| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in mRNA, complete cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>emb|CR857184.1| Pongo pygmaeus mRNA; cDNA DKFZp468E0516 (from clone DKFZp468E0516) Length = 696 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 86 tggagcgcaccttcatcgccatcaagcc 113
>gb|DQ109675.1| Homo sapiens NM23-LV mRNA, complete cds Length = 1012 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 407 tggagcgcaccttcatcgccatcaagcc 434
>emb|CR620528.1| full-length cDNA clone CS0DJ015YC08 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 629 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 41 tggagcgcaccttcatcgccatcaagcc 68
>emb|CR620825.1| full-length cDNA clone CS0DF031YF21 of Fetal brain of Homo sapiens (human) Length = 892 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 304 tggagcgcaccttcatcgccatcaagcc 331
>emb|CR610816.1| full-length cDNA clone CS0DC004YF22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1021 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 433 tggagcgcaccttcatcgccatcaagcc 460
>emb|CR608209.1| full-length cDNA clone CS0DJ015YD20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 619 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 33 tggagcgcaccttcatcgccatcaagcc 60
>emb|CR541718.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0629D for gene NME2, non-metastatic cells 2, protein (NM23B) expressed in; complete cds, incl. stopcodon Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|AY335665.1| Synthetic construct Homo sapiens non-metastatic cells nucleoside-diphosphate kinase 2 (NME2) mRNA, partial cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|BC002476.2| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in, transcript variant 5, mRNA (cDNA clone MGC:2212 IMAGE:3349768), complete cds Length = 686 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 43 tggagcgcaccttcatcgccatcaagcc 70
>gb|BC095458.1| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in, mRNA (cDNA clone MGC:111348 IMAGE:30524221), complete cds Length = 689 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 52 tggagcgcaccttcatcgccatcaagcc 79
>gb|AY891893.1| Synthetic construct Homo sapiens clone FLH012421.01L non-metastatic cells 2 (NME2) mRNA, partial cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|AY891892.1| Synthetic construct Homo sapiens clone FLH012420.01L non-metastatic cells 2 (NME2) mRNA, partial cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|AY889404.1| Synthetic construct Homo sapiens clone FLH012424.01X non-metastatic cells 2 protein (NM23B) mRNA, complete cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|AY893558.1| Synthetic construct Homo sapiens clone FLH130974.01X non-metastatic cells 2 (NME2) mRNA, complete cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>gb|AY893557.1| Synthetic construct Homo sapiens clone FLH130973.01X non-metastatic cells 2 (NME2) mRNA, complete cds Length = 459 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 11 tggagcgcaccttcatcgccatcaagcc 38
>ref|NM_001018139.1| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), transcript variant 4, mRNA Length = 702 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 59 tggagcgcaccttcatcgccatcaagcc 86
>ref|NM_001018138.1| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), transcript variant 3, mRNA Length = 763 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 120 tggagcgcaccttcatcgccatcaagcc 147
>ref|NM_001018137.1| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), transcript variant 2, mRNA Length = 810 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 167 tggagcgcaccttcatcgccatcaagcc 194
>ref|NM_002512.2| Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), transcript variant 1, mRNA Length = 822 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 235 tggagcgcaccttcatcgccatcaagcc 262
>gb|AC005839.1|AC005839 Homo sapiens chromosome 17, clone hRPK.481_C_4, complete sequence Length = 128328 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 93324 tggagcgcaccttcatcgccatcaagcc 93351
>gb|U29200.1|HSU29200 Human nucleoside diphosphate kinase B (nm23-H2) gene, 5'-region and partial cds Length = 1509 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 1466 tggagcgcaccttcatcgccatcaagcc 1493
>gb|L16785.1|HUMPUF Homo sapiens c-myc transcription factor (puf) mRNA, complete cds Length = 647 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 60 tggagcgcaccttcatcgccatcaagcc 87
>emb|X58965.1|HSNM23H2G H.sapiens RNA for nm23-H2 gene Length = 670 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 83 tggagcgcaccttcatcgccatcaagcc 110
>gb|M36981.1|HUMNM23H2S Human putative NDP kinase (nm23-H2S) mRNA, complete cds Length = 670 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||||||||||||||| Sbjct: 83 tggagcgcaccttcatcgccatcaagcc 110
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 335 agatggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||| |||||||||||||| Sbjct: 90418 agatggagcgcacctttatcgccatcaagcc 90388 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 156 cgcagacgggaggaacgccgcgctcgccaccctc 189 |||||| ||||||||||| ||||| ||||||||| Sbjct: 90818 cgcagaggggaggaacgcggcgctggccaccctc 90785
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 335 agatggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||| |||||||||||||| Sbjct: 29442393 agatggagcgcacctttatcgccatcaagcc 29442363 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 156 cgcagacgggaggaacgccgcgctcgccaccctc 189 |||||| ||||||||||| ||||| ||||||||| Sbjct: 29442793 cgcagaggggaggaacgcggcgctggccaccctc 29442760
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 335 agatggagcgcaccttcatcgccatcaagcc 365 |||||||||||||||| |||||||||||||| Sbjct: 26663 agatggagcgcacctttatcgccatcaagcc 26633 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 156 cgcagacgggaggaacgccgcgctcgccaccctc 189 |||||| ||||||||||| ||||| ||||||||| Sbjct: 27063 cgcagaggggaggaacgcggcgctggccaccctc 27030
>ref|NM_205777.1| Bos taurus nucleoside-diphosphate kinase NBR-B (NBR-B), mRNA Length = 865 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 |||||||||||||| |||||||||||||| Sbjct: 221 gagcgcaccttcattgccatcaagcccga 249
>gb|AY911378.1| Bos taurus clone IMAGE:7961517 NDP kinase NBR-A mRNA, complete cds Length = 684 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 |||||||||||||| |||||||||||||| Sbjct: 52 gagcgcaccttcattgccatcaagcccga 80
>ref|NM_205818.1| Bos taurus nucleoside-diphosphate kinase NBR-A (NBR-A), mRNA Length = 696 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 |||||||||||||| |||||||||||||| Sbjct: 67 gagcgcaccttcattgccatcaagcccga 95
>emb|X92957.1|BTNBRB B.taurus mRNA for nucleoside diphosphate kinase (NBR-B) Length = 865 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 |||||||||||||| |||||||||||||| Sbjct: 221 gagcgcaccttcattgccatcaagcccga 249
>emb|X92956.1|BTNBRA B.taurus mRNA for nucleoside diphosphate kinase (NBR-A) Length = 696 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcccga 368 |||||||||||||| |||||||||||||| Sbjct: 67 gagcgcaccttcattgccatcaagcccga 95
>ref|NM_001024638.1| Canis familiaris non-metastatic cells 2, protein (NM23B) expressed in (NME2), mRNA Length = 459 Score = 46.1 bits (23), Expect = 0.079 Identities = 26/27 (96%) Strand = Plus / Plus Query: 339 ggagcgcaccttcatcgccatcaagcc 365 ||||||||| ||||||||||||||||| Sbjct: 12 ggagcgcacgttcatcgccatcaagcc 38
>ref|XM_414714.1| PREDICTED: Gallus gallus similar to expressed in non-metastatic cells 3 (LOC416399), mRNA Length = 1260 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaa 362 ||||||||||||||||||||||| Sbjct: 106 gagcgcaccttcatcgccatcaa 128
>ref|XM_386148.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05972.1) partial mRNA Length = 717 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 accttcatcgccatcaagcccga 368 ||||||||||||||||||||||| Sbjct: 271 accttcatcgccatcaagcccga 293
>emb|CR685311.2|CNS0FRQJ Tetraodon nigroviridis full-length cDNA Length = 758 Score = 46.1 bits (23), Expect = 0.079 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 tggagcgcaccttcatcgccatcaagcccga 368 ||||||| |||||||| |||||||||||||| Sbjct: 79 tggagcgaaccttcattgccatcaagcccga 109
>dbj|AB108158.1| Phleum pratense DNA, SSR, microsatellite A07-G09 Length = 568 Score = 46.1 bits (23), Expect = 0.079 Identities = 29/31 (93%) Strand = Plus / Minus Query: 338 tggagcgcaccttcatcgccatcaagcccga 368 |||||| |||| ||||||||||||||||||| Sbjct: 567 tggagcacaccctcatcgccatcaagcccga 537
>dbj|AB207045.1| Canis familiaris nm23-C2 mRNA for NM23-C2, complete cds Length = 459 Score = 46.1 bits (23), Expect = 0.079 Identities = 26/27 (96%) Strand = Plus / Plus Query: 339 ggagcgcaccttcatcgccatcaagcc 365 ||||||||| ||||||||||||||||| Sbjct: 12 ggagcgcacgttcatcgccatcaagcc 38
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 343 cgcaccttcatcgccatcaagcccga 368 ||||| |||||||||||||||||||| Sbjct: 2318952 cgcacgttcatcgccatcaagcccga 2318927
>ref|NM_008704.2| Mus musculus expressed in non-metastatic cells 1, protein (Nme1), mRNA Length = 1235 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 318 gagcgcaccttcattgccatcaagcc 343
>ref|XR_003641.1| PREDICTED: Mus musculus similar to Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (nm23-M2) (P18) (LOC432482), mRNA Length = 623 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 72 gagcgcaccttcattgccatcaagcc 97
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 20831 gagcgcaccttcattgccatcaagcc 20856
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7 Length = 344615 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 343 cgcaccttcatcgccatcaagcccga 368 ||||| |||||||||||||||||||| Sbjct: 172975 cgcacgttcatcgccatcaagcccga 172950
>emb|AL662838.12| Mouse DNA sequence from clone RP23-378I13 on chromosome 11 Contains the 3' end of the Mbtd1 gene for mbt domain containing 1, the Nme2 gene for expressed in non-metastatic cells 2 protein, the Nme1 gene for expressed in non-metastatic cells 1 protein, the Spag9 gene for sperm associated antigen 9 and a ribosomal protein L27 (Rpl27) pseudogene, complete sequence Length = 215435 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 48676 gagcgcaccttcattgccatcaagcc 48651
>gb|BC005629.1| Mus musculus expressed in non-metastatic cells 1, protein, mRNA (cDNA clone MGC:11447 IMAGE:3964056), complete cds Length = 681 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 57 gagcgcaccttcattgccatcaagcc 82
>emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 in linkage group 20 Contains a novel gene simialr to human and mouse CASKIN2 (CASK interacting protein 2), a novel gene for a nucleoside-diphosphate kinase (wu:fk59e05) and a CpG island, complete sequence Length = 167376 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||| ||||||||||||||||| Sbjct: 89640 gagcgcactttcatcgccatcaagcc 89665
>dbj|AK136353.1| Mus musculus 15 days embryo embryonic body between diaphragm and neck cDNA, RIKEN full-length enriched library, clone:8130401N22 product:Nucleoside diphosphate kinase A (EC 2.7.4.6) (NDK A) (NDP kinase A) (Tumor metastatic process-associated protein) (Metastasis inhibition factor NM23) (NDPK-A) (nm23-M1), full insert sequence Length = 831 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 133 gagcgcaccttcattgccatcaagcc 158
>gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome 10, complete sequence Length = 256496 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 67400 gagcgcaccttcattgccatcaagcc 67375
>dbj|AK034899.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430059B17 product:expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase), full insert sequence Length = 2921 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 57 gagcgcaccttcattgccatcaagcc 82
>ref|NM_138548.1| Rattus norvegicus expressed in non-metastatic cells 1 (Nme1), mRNA Length = 737 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 ||||| |||||||||||||||||||| Sbjct: 124 gagcgtaccttcatcgccatcaagcc 149
>ref|NM_199970.1| Danio rerio non-metastatic cells 2-like, protein (NM23B) expressed in (nme2l), mRNA Length = 671 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||| ||||||||||||||||| Sbjct: 82 gagcgcactttcatcgccatcaagcc 107
>ref|XM_577323.1| PREDICTED: Rattus norvegicus similar to DNA segment, Chr 5, ERATO Doi 577, expressed (LOC501899), mRNA Length = 2988 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcctccaagctcttccactcc 87 |||||||||||||||||||||| Sbjct: 2608 ctcctccaagctcttccactcc 2587
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 cgccgccgccgccatgacgagc 60 |||||||||||||||||||||| Sbjct: 1061650 cgccgccgccgccatgacgagc 1061671
>dbj|D13374.1|RATNDPK Rattus norvegicus mRNA for nucleoside diphosphate kinase beta isoform, complete cds Length = 737 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 ||||| |||||||||||||||||||| Sbjct: 124 gagcgtaccttcatcgccatcaagcc 149
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 127303 gagcgcaccttcattgccatcaagcc 127278
>gb|U38795.1|RNNDPKB2 Rattus norvegicus NDP kinase beta gene 5' regulatory region and partial cds Length = 1035 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 ||||| |||||||||||||||||||| Sbjct: 922 gagcgtaccttcatcgccatcaagcc 947
>gb|M65037.1|MUSNM23V Mouse metastasis-reducing protein (nm23) mRNA, complete cds Length = 462 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||||||||| ||||||||||| Sbjct: 13 gagcgcaccttcattgccatcaagcc 38
>gb|BC059486.1| Danio rerio non-metastatic cells 2-like, protein (NM23B) expressed in, mRNA (cDNA clone MGC:73122 IMAGE:4789024), complete cds Length = 671 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gagcgcaccttcatcgccatcaagcc 365 |||||||| ||||||||||||||||| Sbjct: 82 gagcgcactttcatcgccatcaagcc 107
>gb|AY596294.1| Haloarcula marismortui ATCC 43049 plasmid pNG500, complete sequence Length = 132678 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gcagccatcccaaccgcagcc 300 ||||||||||||||||||||| Sbjct: 61955 gcagccatcccaaccgcagcc 61975
>gb|AF154053.1| Lyciasalamandra atifi mitochondrion, complete genome Length = 16650 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ctcctcctccaagctcttcca 83 ||||||||||||||||||||| Sbjct: 15485 ctcctcctccaagctcttcca 15505
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gccgcgctcgccaccctcggc 192 ||||||||||||||||||||| Sbjct: 591625 gccgcgctcgccaccctcggc 591645
>gb|AY657586.1| Synthetic construct Peudomonas aeruginosa clone FLH040848.01F PA3214 gene, partial cds Length = 645 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gccgcgctcgccaccctcggc 192 ||||||||||||||||||||| Sbjct: 52 gccgcgctcgccaccctcggc 72
>emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chromosome 1 Contains the 3' end of the SMYD3 gene for SET and MYND domain containing 3 and a CpG island, complete sequence Length = 85198 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ctcctcctccaagctcttcca 83 ||||||||||||||||||||| Sbjct: 38901 ctcctcctccaagctcttcca 38921
>emb|AJ719428.1| Gallus gallus mRNA for hypothetical protein, clone 2d7 Length = 2878 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 cgccgccgccgccatgacgagctcc 63 |||||||||||||||| |||||||| Sbjct: 34 cgccgccgccgccatgccgagctcc 10
>ref|NM_001006175.1| Gallus gallus TNF receptor-associated protein 1 (TRAP1), mRNA Length = 2878 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 cgccgccgccgccatgacgagctcc 63 |||||||||||||||| |||||||| Sbjct: 34 cgccgccgccgccatgccgagctcc 10
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 337 atggagcgcaccttcatcgccatcaagcc 365 |||||||||||||| || ||||||||||| Sbjct: 286478 atggagcgcacctttattgccatcaagcc 286450
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 337 atggagcgcaccttcatcgccatcaagcc 365 |||||||||||||| |||||||| ||||| Sbjct: 1079109 atggagcgcacctttatcgccattaagcc 1079137
>gb|AC017109.5| Homo sapiens chromosome 4 clone RP11-568O24, complete sequence Length = 195169 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 cctcgccaggacctccaccct 215 ||||||||||||||||||||| Sbjct: 133523 cctcgccaggacctccaccct 133543
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 cgccgccgccatgacgagctcctcc 66 ||||||||||| ||||||||||||| Sbjct: 18863740 cgccgccgccaggacgagctcctcc 18863716 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 15585054 ctcctcctcctccaagctct 15585073
>gb|AE009701.1| Brucella melitensis 16M chromosome II, section 63 of 107 of the complete sequence Length = 11285 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gccgcgctcgccaccctcggc 192 ||||||||||||||||||||| Sbjct: 8675 gccgcgctcgccaccctcggc 8655
>gb|AE004744.1| Pseudomonas aeruginosa PAO1, section 305 of 529 of the complete genome Length = 14719 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gccgcgctcgccaccctcggc 192 ||||||||||||||||||||| Sbjct: 12989 gccgcgctcgccaccctcggc 13009
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1297_D02 Length = 104470 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 cgccgccgccatgacgagctcctcc 66 ||||||||||| ||||||||||||| Sbjct: 30493 cgccgccgccaggacgagctcctcc 30469
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gccgcgctcgccaccctcggc 192 ||||||||||||||||||||| Sbjct: 625451 gccgcgctcgccaccctcggc 625431
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gccgcgctcgccaccctcggc 192 ||||||||||||||||||||| Sbjct: 625439 gccgcgctcgccaccctcggc 625419
>gb|AC123613.16| Mus musculus chromosome 1, clone RP23-434L2, complete sequence Length = 204785 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctcctccaagctcttccactcc 87 ||||||||||| |||||||||||| Sbjct: 19912 tcctcctccaatctcttccactcc 19935
>ref|XM_481795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1550 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 40 ctcctcctcctccaagctct 59
>ref|NM_196016.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0076H04.9), mRNA Length = 1137 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gcaccttcatcgccatcaag 363 |||||||||||||||||||| Sbjct: 872 gcaccttcatcgccatcaag 891
>ref|NM_184961.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ccatgacgagctcctcctcc 69 |||||||||||||||||||| Sbjct: 109 ccatgacgagctcctcctcc 128
>gb|BT017948.1| Zea mays clone EL01N0521H06.c mRNA sequence Length = 700 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gtttcgccgccgccgccatg 54 |||||||||||||||||||| Sbjct: 69 gtttcgccgccgccgccatg 88
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003G23, complete sequence Length = 135931 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ccatgacgagctcctcctcc 69 |||||||||||||||||||| Sbjct: 9207 ccatgacgagctcctcctcc 9226
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 31285 ctcctcctcctccaagctct 31266
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 64490 ctcctcctcctccaagctct 64509
>ref|XM_324001.1| Neurospora crassa OR74A hypothetical protein (NCU04646.1) partial mRNA Length = 1542 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 agctcctcctcctccaagctcttc 81 ||||||||||||||| |||||||| Sbjct: 295 agctcctcctcctcccagctcttc 318
>ref|XM_954096.1| Neurospora crassa OR74A hypothetical protein (NCU04646.1) partial mRNA Length = 1542 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 agctcctcctcctccaagctcttc 81 ||||||||||||||| |||||||| Sbjct: 295 agctcctcctcctcccagctcttc 318
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccatgacgagctcctcctcc 69 |||||||||||||||||||| Sbjct: 26825006 ccatgacgagctcctcctcc 26824987
>gb|AC118051.7| Mus musculus chromosome 1, clone RP24-430E15, complete sequence Length = 180197 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcctccaagctcttccactcc 87 ||||||||||| |||||||||||| Sbjct: 6246 tcctcctccaatctcttccactcc 6223
>emb|Z79754.1|CEF25H2 Caenorhabditis elegans Cosmid F25H2, complete sequence Length = 42366 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 accttcatcgccatcaagcc 365 |||||||||||||||||||| Sbjct: 19869 accttcatcgccatcaagcc 19850
>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232339 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ctcctcctccaagctcttcc 82 |||||||||||||||||||| Sbjct: 79994 ctcctcctccaagctcttcc 79975
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccatgacgagctcctcctcc 69 |||||||||||||||||||| Sbjct: 4006 ccatgacgagctcctcctcc 3987
>emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmid contig 5F3 Length = 83192 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 agctcctcctcctccaagctcttc 81 ||||||||||||||| |||||||| Sbjct: 49321 agctcctcctcctcccagctcttc 49344
>emb|AL645771.1|SCSCP2 Streptomyces coelicolor A3(2) plasmid SCP2 Length = 31317 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgccgcgctcgccaccctcg 190 |||||||||||||||||||| Sbjct: 24932 cgccgcgctcgccaccctcg 24913
>emb|AJ414671.1|SCO414671 Streptomyces coelicolor plasmid 2 (SCP2*) Length = 7686 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgccgcgctcgccaccctcg 190 |||||||||||||||||||| Sbjct: 5745 cgccgcgctcgccaccctcg 5764
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gcaccttcatcgccatcaag 363 |||||||||||||||||||| Sbjct: 46832 gcaccttcatcgccatcaag 46813
>emb|AL954375.6| Mouse DNA sequence from clone RP23-16F14 on chromosome 2, complete sequence Length = 172487 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gatactcccactcccaccac 243 |||||||||||||||||||| Sbjct: 16150 gatactcccactcccaccac 16169
>dbj|AK144767.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730031F23 product:unclassifiable, full insert sequence Length = 1749 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gatactcccactcccaccac 243 |||||||||||||||||||| Sbjct: 1045 gatactcccactcccaccac 1064
>ref|NM_060360.3| Caenorhabditis elegans F25H2.5 (F25H2.5) mRNA, complete cds Length = 606 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 accttcatcgccatcaagcc 365 |||||||||||||||||||| Sbjct: 85 accttcatcgccatcaagcc 104
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 7151270 ctcctcctcctccaagctct 7151289
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gcaccttcatcgccatcaag 363 |||||||||||||||||||| Sbjct: 10512129 gcaccttcatcgccatcaag 10512148
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgccgcgctcgccaccctcg 190 |||||||||||||||||||| Sbjct: 21477444 cgccgcgctcgccaccctcg 21477463
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccatgacgagctcctcctcc 69 |||||||||||||||||||| Sbjct: 26916329 ccatgacgagctcctcctcc 26916310
>gb|AF283993.1|AF283993 Ictalurus punctatus putative oncoprotein nm23 (nm23) mRNA, complete cds Length = 635 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcaccttcatcgccatcaa 362 |||||||||||||||||||| Sbjct: 59 cgcaccttcatcgccatcaa 78
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 gcctacatgctccagggtcaggac 321 |||||| ||||||||||||||||| Sbjct: 3495733 gcctacctgctccagggtcaggac 3495710
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tccagggtcaggacgtgcat 327 |||||||||||||||||||| Sbjct: 169388 tccagggtcaggacgtgcat 169369
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgccgcgctcgccaccctcg 190 |||||||||||||||||||| Sbjct: 34628 cgccgcgctcgccaccctcg 34647
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgccgcgctcgccaccctcg 190 |||||||||||||||||||| Sbjct: 111944 cgccgcgctcgccaccctcg 111963
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 132812 ctcctcctcctccaagctct 132831
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E11 Length = 150200 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 19209 ctcctcctcctccaagctct 19228
>dbj|AK103809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A12, full insert sequence Length = 796 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ccatgacgagctcctcctcc 69 |||||||||||||||||||| Sbjct: 73 ccatgacgagctcctcctcc 92
>dbj|AK066618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073L11, full insert sequence Length = 1551 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 40 ctcctcctcctccaagctct 59
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gcaccttcatcgccatcaag 363 |||||||||||||||||||| Sbjct: 10518168 gcaccttcatcgccatcaag 10518187
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcctcctcctccaagctct 79 |||||||||||||||||||| Sbjct: 7217241 ctcctcctcctccaagctct 7217260
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tccagggtcaggacgtgcat 327 |||||||||||||||||||| Sbjct: 1720412 tccagggtcaggacgtgcat 1720431
>dbj|AB073371.1| Cavia porcellus mRNA for ferritin heavy chain, complete cds Length = 1053 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgccgccgccgccatgacga 58 |||||||||||||||||||| Sbjct: 114 cgccgccgccgccatgacga 133
>dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, complete cds Length = 1225 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgccgccgccgccatgacga 58 |||||||||||||||||||| Sbjct: 108 cgccgccgccgccatgacga 89 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,583,430 Number of Sequences: 3902068 Number of extensions: 3583430 Number of successful extensions: 119420 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117263 Number of HSP's gapped (non-prelim): 2156 length of query: 368 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 346 effective length of database: 17,147,199,772 effective search space: 5932931121112 effective search space used: 5932931121112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
