ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart60e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
114KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 68 1e-11
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 64 1e-10
3PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 56 5e-08
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 47 2e-05
5XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... 28 8.9

>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 36/70 (51%), Positives = 44/70 (62%)
 Frame = +1

Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALQANVLGIVLN 432
           D LKLG CA+                   CCSLL GL +LEAAVCLCTA++AN+LG  LN
Sbjct: 57  DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCTAIKANILGKNLN 114

Query: 433 IPVKLSLLLN 462
           +P+ LSL+LN
Sbjct: 115 LPIALSLVLN 124



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +1

Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALQANVLGIVLN 432
           D LKL  CA                  ++CC LL GL DL+AA+CLCTA++ANVLGI LN
Sbjct: 51  DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIKANVLGIHLN 105

Query: 433 IPVKLSLLLN 462
           +P+ L+ +LN
Sbjct: 106 VPLSLNFILN 115



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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 27/70 (38%), Positives = 39/70 (55%)
 Frame = +1

Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALQANVLGIVLN 432
           D LKLGAC +                   CC LLGGL DL+AA+CLCT ++  +L I + 
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCTTIRLKLLNINII 321

Query: 433 IPVKLSLLLN 462
           +P+ L +L++
Sbjct: 322 LPIALQVLID 331



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +1

Query: 334 DKCCSLLGGLADLEAAVCLCTALQANVLGIVLNIPVKLSLLLN 462
           D CC+L+GGL D+EA VCLC  L+A  LGI LN+   L L+LN
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILN 65



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>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase|
           B) (1,4-beta-D-xylan xylanohydrolase B)
          Length = 592

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 28  TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 141
           T SAS  + PG    RT +  C+   L A  F A  AC
Sbjct: 2   TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,439,899
Number of Sequences: 219361
Number of extensions: 284712
Number of successful extensions: 1089
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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