Clone Name | bart60e07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | 14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor | 68 | 1e-11 | 2 | CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... | 64 | 1e-10 | 3 | PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein | 56 | 5e-08 | 4 | HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... | 47 | 2e-05 | 5 | XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... | 28 | 8.9 |
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>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 67.8 bits (164), Expect = 1e-11 Identities = 36/70 (51%), Positives = 44/70 (62%) Frame = +1 Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALQANVLGIVLN 432 D LKLG CA+ CCSLL GL +LEAAVCLCTA++AN+LG LN Sbjct: 57 DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCTAIKANILGKNLN 114 Query: 433 IPVKLSLLLN 462 +P+ LSL+LN Sbjct: 115 LPIALSLVLN 124
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 64.3 bits (155), Expect = 1e-10 Identities = 33/70 (47%), Positives = 43/70 (61%) Frame = +1 Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALQANVLGIVLN 432 D LKL CA ++CC LL GL DL+AA+CLCTA++ANVLGI LN Sbjct: 51 DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIKANVLGIHLN 105 Query: 433 IPVKLSLLLN 462 +P+ L+ +LN Sbjct: 106 VPLSLNFILN 115
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +1 Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALQANVLGIVLN 432 D LKLGAC + CC LLGGL DL+AA+CLCT ++ +L I + Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCTTIRLKLLNINII 321 Query: 433 IPVKLSLLLN 462 +P+ L +L++ Sbjct: 322 LPIALQVLID 331
>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)| Length = 80 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/43 (58%), Positives = 31/43 (72%) Frame = +1 Query: 334 DKCCSLLGGLADLEAAVCLCTALQANVLGIVLNIPVKLSLLLN 462 D CC+L+GGL D+EA VCLC L+A LGI LN+ L L+LN Sbjct: 26 DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILN 65
>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase| B) (1,4-beta-D-xylan xylanohydrolase B) Length = 592 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 28 TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 141 T SAS + PG RT + C+ L A F A AC Sbjct: 2 TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,439,899 Number of Sequences: 219361 Number of extensions: 284712 Number of successful extensions: 1089 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1079 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1089 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)