>YWFM_BACSU (P39649) Hypothetical transport protein ywfM|
          Length = 296

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 434 SVSFIASTAPWEEEEAGPRETYWLXXXXXXAGTWVGDSDVSFSLHVTVLG 285
           S   IA T  W   +  PR ++W+      AG W+  SD S ++ + V G
Sbjct: 101 SAPIIAGTLEWAVLKKRPRNSWWIATVLALAGCWLLFSD-SSNVRIDVAG 149

>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)|
          Length = 1285

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 328  PTHVPXXXXXXXSQYVSRGPASSSSQGAVEAMKDTLSRW 444
            P   P       S+++SRGPA  +++ A    K  LS+W
Sbjct: 1042 PKMTPEQMAKEMSEFLSRGPAVLATKAAAGTKKYDLSKW 1080

>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (hDomino)
            (CAG repeat protein 32) (Trinucleotide repeat-containing
            gene 12 protein)
          Length = 3160

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 82   QPAAAEMQPPVGSPTAAPQSEAQ 150
            QP AA  QPP G P   PQ + Q
Sbjct: 2563 QPQAAGSQPPAGPPAVQPQPQPQ 2585

>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250|
           kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin)
          Length = 1781

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 40  PFASEKKPERTLQMQPAAAEMQPPVGSPTAAPQSEAQ 150
           P  S +KPE TL+ + + AE+ PP  S  A  + + +
Sbjct: 231 PKQSTEKPEETLKREQSHAEISPPAESGQAVEECKEE 267

>AURB_CHLAU (P27197) Auracyanin B precursor (Ac-B) [Contains: Auracyanin B-1;|
           Auracyanin B-2]
          Length = 235

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 46  ASEKKPERTLQMQPAAAEMQPPVGSPTAAPQSEA 147
           A+  +P  T +   A A  QPP   PT AP ++A
Sbjct: 63  AATPRPTATPRPTAAPAPTQPPAAQPTTAPATQA 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.307    0.119    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,344,356
Number of Sequences: 219361
Number of extensions: 345431
Number of successful extensions: 1277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)