ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart60d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY107283.1| Zea mays PCO076711 mRNA sequence 178 9e-42
2gb|AY106235.1| Zea mays PCO066039 mRNA sequence 125 1e-25
3ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
4dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
5dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
6dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
7dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
8gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
10dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
12dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
13gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence 60 6e-06
14gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein ... 52 0.001
15gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (T... 52 0.001
16gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (T... 52 0.001
17gb|BC074390.1| Xenopus laevis MGC84343 protein, mRNA (cDNA clone... 50 0.006
18gb|AF352797.1|AF352797 Nicotiana tabacum ankyrin-repeat protein ... 46 0.090
19emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-re... 46 0.090
20ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.36
21emb|AJ245966.1|DRE245966 Danio rerio mRNA for Pbx4/Lazarus homeo... 44 0.36
22gb|AC015798.7| Homo sapiens chromosome 15, clone RP11-341E5, com... 44 0.36
23gb|AC087844.6| Homo sapiens chromosome 15, clone CTD-2534H21, co... 44 0.36
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
25dbj|AK109606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
26dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
28emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 44 0.36
29emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260... 44 0.36
30ref|XM_527135.1| PREDICTED: Pan troglodytes LOC471757 (LOC471757... 42 1.4
31gb|BC000745.2| Homo sapiens MAX dimerization protein 3, mRNA (cD... 42 1.4
32gb|BC041690.1| Homo sapiens MAX dimerization protein 3, mRNA (cD... 42 1.4
33gb|BC032586.1| Homo sapiens MAX dimerization protein 3, mRNA (cD... 42 1.4
34gb|AC146507.2| Homo sapiens chromosome 5 clone CTD-2301A4, compl... 42 1.4
35ref|XM_860540.1| PREDICTED: Canis familiaris similar to MAX dime... 42 1.4
36ref|XM_546209.2| PREDICTED: Canis familiaris similar to MAX dime... 42 1.4
37ref|NM_031300.2| Homo sapiens MAX dimerization protein 3 (MXD3),... 42 1.4
38gb|AC108734.10| Homo sapiens 3 BAC RP11-259P15 (Roswell Park Can... 42 1.4
39emb|AL833959.1|HSM805173 Homo sapiens mRNA; cDNA DKFZp434F1815 (... 42 1.4
40emb|CR626344.1| full-length cDNA clone CS0DD009YK07 of Neuroblas... 42 1.4
41emb|CR613684.1| full-length cDNA clone CS0DD001YD18 of Neuroblas... 42 1.4
42dbj|AK092842.1| Homo sapiens cDNA FLJ35523 fis, clone SPLEN2001503 42 1.4
43dbj|AK057034.1| Homo sapiens cDNA FLJ32472 fis, clone SKNMC20003... 42 1.4
44emb|CR596072.1| full-length cDNA clone CS0DF021YP10 of Fetal bra... 42 1.4
45emb|CR595562.1| full-length cDNA clone CS0DB009YI06 of Neuroblas... 42 1.4
46gb|AC112170.2| Homo sapiens chromosome 5 clone CTD-2018G4, compl... 42 1.4
47gb|AC110005.2| Homo sapiens chromosome 5 clone RP11-265K23, comp... 42 1.4
48emb|BX649404.8| Zebrafish DNA sequence from clone CH211-285O15 i... 42 1.4
49gb|AY107770.1| Zea mays PCO087426 mRNA sequence 42 1.4
50dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.4
51ref|XM_482561.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
52ref|XM_468465.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
53ref|XM_507063.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
54ref|XM_519538.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 5.5
55gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
56gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
57gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
58emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.5
59ref|XM_387088.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 5.5
60ref|XM_801911.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.5
61ref|XM_811656.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.5
62gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08,... 40 5.5
63ref|XM_793038.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.5
64gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from... 40 5.5
65gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosom... 40 5.5
66gb|AY036888.1| Brassica napus MADS-box protein (FLC1) mRNA, comp... 40 5.5
67gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosom... 40 5.5
68dbj|AK043628.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 5.5
69dbj|AK043477.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 5.5
70dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
71dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
72dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
73dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
74dbj|AK222579.1| Homo sapiens mRNA for MAX dimerization protein 3... 40 5.5
75ref|XM_224620.3| PREDICTED: Rattus norvegicus similar to Ankyrin... 40 5.5
76gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 40 5.5
77gb|AY115678.1| Brassica rapa FLC1 (FLC1) gene, exons 2 through 7... 40 5.5
78gb|AY115674.1| Brassica oleracea FLC1 (FLC1) gene, exons 2 throu... 40 5.5
79emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 i... 40 5.5
80dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
81dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12,... 40 5.5
82dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
83dbj|AK099915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
84dbj|AK074002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
85dbj|AK070338.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
86dbj|AK069544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
87gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
88gb|AC149346.2| Phakopsora pachyrhizi clone JGIAFNA-33E14, comple... 40 5.5
89emb|AL162632.4|CNS01RHX Human chromosome 14 DNA sequence BAC R-4... 40 5.5

>gb|AY107283.1| Zea mays PCO076711 mRNA sequence
          Length = 1604

 Score =  178 bits (90), Expect = 9e-42
 Identities = 144/162 (88%)
 Strand = Plus / Plus

                                                                       
Query: 252 tcctttcgatttttcttctatgcaaagtttgctcaatgatccatctataaaggagatggc 311
           |||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 390 tccttttgattttggttctatgcaaagtttgctcaatgatccatctattaaggagatggc 449

                                                                       
Query: 312 agatcagattgcaagggaccctgcattcaatcagatggctgagcagctacagaaaggtgc 371
           |||||| ||||||||||| ||||||||||| | |||||||||||||||||||| | ||||
Sbjct: 450 agatcaaattgcaagggatcctgcattcaaccggatggctgagcagctacagagaagtgc 509

                                                     
Query: 372 tcagggtgcaggagaacagggcatgcctccattggatcctca 413
           |||  |  |||||||||||||||  ||||||||  |||||||
Sbjct: 510 tcaaagcacaggagaacagggcacacctccattaaatcctca 551



to top

>gb|AY106235.1| Zea mays PCO066039 mRNA sequence
          Length = 1360

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                       
Query: 259 gatttttcttctatgcaaagtttgctcaatgatccatctataaaggagatggcagatcag 318
           |||||||||||||||   |  ||||||||||| ||||| ||||  |||||||| || || 
Sbjct: 205 gatttttcttctatgagcaacttgctcaatgacccatcgataagagagatggctgagcaa 264

                                                                       
Query: 319 attgcaagggaccctgcattcaatcagatggctgagcagctacagaaaggtgctcagggt 378
           |||||||| |||||||  ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 265 attgcaagtgaccctgtgttcaaccagatggctgaacagcttcagaaaagtgctcagggt 324

                                              
Query: 379 gcaggagaacagggcatgcctccattggatcctca 413
           || ||||||||||| || ||| |||||||||||||
Sbjct: 325 gctggagaacagggtattcctgcattggatcctca 359



to top

>ref|XM_483562.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1306

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                       
Query: 254 ctttcgatttttcttctatgcaaagtttgctcaatgatccatctataaaggagatggcag 313
           |||| |||||| ||||| |||| || |||||||||||||||||| |||||||||| ||||
Sbjct: 175 cttttgattttgcttctttgcacagcttgctcaatgatccatctgtaaaggagatagcag 234

                                                       
Query: 314 atcagattgcaagggaccctgcattcaatcagatggctgagcag 357
           |||||||||||| ||||||||| ||||  |||||||| ||||||
Sbjct: 235 atcagattgcaaaggaccctgcgttcacccagatggcggagcag 278



to top

>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full
           insert sequence
          Length = 1292

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                       
Query: 254 ctttcgatttttcttctatgcaaagtttgctcaatgatccatctataaaggagatggcag 313
           |||| |||||| ||||| |||| || |||||||||||||||||| |||||||||| ||||
Sbjct: 175 cttttgattttgcttctttgcacagcttgctcaatgatccatctgtaaaggagatagcag 234

                                                       
Query: 314 atcagattgcaagggaccctgcattcaatcagatggctgagcag 357
           |||||||||||| ||||||||| ||||  |||||||| ||||||
Sbjct: 235 atcagattgcaaaggaccctgcgttcacccagatggcggagcag 278



to top

>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full
           insert sequence
          Length = 1529

 Score =  109 bits (55), Expect = 7e-21
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                       
Query: 280 ttgctcaatgatccatctataaaggagatggcagatcagattgcaagggaccctgcattc 339
           ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||
Sbjct: 352 ttgctcaatgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttc 411

                                              
Query: 340 aatcagatggctgagcagctacagaaaggtgctca 374
           |  |||||||| |||||||| |||||  |||||||
Sbjct: 412 acccagatggcagagcagctgcagaagagtgctca 446



to top

>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full
           insert sequence
          Length = 1475

 Score =  109 bits (55), Expect = 7e-21
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                       
Query: 280 ttgctcaatgatccatctataaaggagatggcagatcagattgcaagggaccctgcattc 339
           ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||
Sbjct: 352 ttgctcaatgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttc 411

                                              
Query: 340 aatcagatggctgagcagctacagaaaggtgctca 374
           |  |||||||| |||||||| |||||  |||||||
Sbjct: 412 acccagatggcagagcagctgcagaagagtgctca 446



to top

>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full
           insert sequence
          Length = 1418

 Score =  109 bits (55), Expect = 7e-21
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                       
Query: 280 ttgctcaatgatccatctataaaggagatggcagatcagattgcaagggaccctgcattc 339
           ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||
Sbjct: 357 ttgctcaatgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttc 416

                                              
Query: 340 aatcagatggctgagcagctacagaaaggtgctca 374
           |  |||||||| |||||||| |||||  |||||||
Sbjct: 417 acccagatggcagagcagctgcagaagagtgctca 451



to top

>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                          
Query: 289    gatccatctataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatg 348
              |||||||||||||||||||||||||| ||||||||||| |||||||  ||||  ||||||
Sbjct: 150143 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 150202

                                        
Query: 349    gctgagcagctacagaaaggtgctca 374
              || |||||||| |||||  |||||||
Sbjct: 150203 gcagagcagctgcagaagagtgctca 150228



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                            
Query: 289      gatccatctataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatg 348
                |||||||||||||||||||||||||| ||||||||||| |||||||  ||||  ||||||
Sbjct: 19667068 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 19667127

                                          
Query: 349      gctgagcagctacagaaaggtgctca 374
                || |||||||| |||||  |||||||
Sbjct: 19667128 gcagagcagctgcagaagagtgctca 19667153



to top

>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450E05
          Length = 176553

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 289   gatccatctataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatg 348
             |||||||||||||||||||||||||| ||||||||||| |||||||  ||||  ||||||
Sbjct: 12754 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 12813

                                       
Query: 349   gctgagcagctacagaaaggtgctca 374
             || |||||||| |||||  |||||||
Sbjct: 12814 gcagagcagctgcagaagagtgctca 12839



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 289      gatccatctataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatg 348
                ||||||||| |||||||||| |||||||||||||||| ||||||||| ||||  ||||||
Sbjct: 26976607 gatccatctgtaaaggagatagcagatcagattgcaaaggaccctgcgttcacccagatg 26976666

                         
Query: 349      gctgagcag 357
                || ||||||
Sbjct: 26976667 gcggagcag 26976675



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 48       ccgcgccgccgagctccgcc 67
                ||||||||||||||||||||
Sbjct: 21084354 ccgcgccgccgagctccgcc 21084373



to top

>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 289   gatccatctataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatg 348
             ||||||||| |||||||||| |||||||||||||||| ||||||||| ||||  ||||||
Sbjct: 78007 gatccatctgtaaaggagatagcagatcagattgcaaaggaccctgcgttcacccagatg 78066

                      
Query: 349   gctgagcag 357
             || ||||||
Sbjct: 78067 gcggagcag 78075



to top

>gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence
          Length = 1379

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 316 cagattgcaagggaccctgcattcaatcagatggctgagcagctacagaa 365
           ||||||||||  ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 313 cagattgcaaaagaccctgcatttaatcagatggcagagcagcttcagaa 362



to top

>gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein mRNA, complete cds
          Length = 1065

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 310 gcagatcagattgcaagggaccctgcattcaatcagatggctgagcagct 359
           ||||| ||||||||||  || ||||||||||| |||||||| ||||||||
Sbjct: 199 gcagaacagattgcaaaagatcctgcattcaaccagatggcagagcagct 248



to top

>gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (TIP3) mRNA,
           complete cds
          Length = 1047

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 316 cagattgcaagggaccctgcattcaatcagatggctgagcagctacagaa 365
           ||||||||||  || ||| |||| |||||||||||||||||||| |||||
Sbjct: 214 cagattgcaaaagatccttcatttaatcagatggctgagcagcttcagaa 263



to top

>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA,
           complete cds
          Length = 1050

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 316 cagattgcaagggaccctgcattcaatcagatggctgagcagctacagaa 365
           ||||||||||  || ||| |||| |||||||||||||||||||| |||||
Sbjct: 217 cagattgcaaaagatccttcatttaatcagatggctgagcagcttcagaa 266



to top

>gb|BC074390.1| Xenopus laevis MGC84343 protein, mRNA (cDNA clone MGC:84343
            IMAGE:6958391), complete cds
          Length = 5118

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 305  agatggcagatcagattgcaaggga 329
            |||||||||||||||||||||||||
Sbjct: 1018 agatggcagatcagattgcaaggga 1042



to top

>gb|AF352797.1|AF352797 Nicotiana tabacum ankyrin-repeat protein HBP1 mRNA, complete cds
          Length = 1331

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 331 cctgcattcaatcagatggctgagcagctacagaa 365
           |||||||| ||||||||||| |||||||| |||||
Sbjct: 324 cctgcatttaatcagatggcggagcagcttcagaa 358



to top

>emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-repeat protein
          Length = 700

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 331 cctgcattcaatcagatggctgagcagctacagaa 365
           ||||||||||| |||||||| |||||||| |||||
Sbjct: 424 cctgcattcaaccagatggcagagcagctccagaa 458



to top

>ref|XM_470424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1369

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 280 ttgctcaatgatccatctataaaggagatggcagatcagattgcaagggaccctgcattc 339
           ||||||||||||||    |||||||||||||| || ||||| || | |||||| || |||
Sbjct: 145 ttgctcaatgatccgagcataaaggagatggcggagcagatcgccaaggacccggcgttc 204

                                     
Query: 340 aatcagatggctgagcagctacagaa 365
           |   ||||||| |||||||| |||||
Sbjct: 205 acggagatggcggagcagctgcagaa 230



to top

>emb|AJ245966.1|DRE245966 Danio rerio mRNA for Pbx4/Lazarus homeodomain protein (pbx4 gene,
           lzr gene)
          Length = 2438

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 216 aggtgttcctccagctgccgctgcag 241
           ||||| ||||||||||||||||||||
Sbjct: 962 aggtgatcctccagctgccgctgcag 937



to top

>gb|AC015798.7| Homo sapiens chromosome 15, clone RP11-341E5, complete sequence
          Length = 182107

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 350    ctgagcagctacagaaaggtgc 371
              ||||||||||||||||||||||
Sbjct: 124703 ctgagcagctacagaaaggtgc 124724



to top

>gb|AC087844.6| Homo sapiens chromosome 15, clone CTD-2534H21, complete sequence
          Length = 177730

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 350    ctgagcagctacagaaaggtgc 371
              ||||||||||||||||||||||
Sbjct: 148283 ctgagcagctacagaaaggtgc 148262



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 45       ccaccgcgccgccgagctccgc 66
                ||||||||||||||||||||||
Sbjct: 24237226 ccaccgcgccgccgagctccgc 24237205



to top

>dbj|AK109606.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F03, full
           insert sequence
          Length = 1427

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 45  ccaccgcgccgccgagctccgc 66
           ||||||||||||||||||||||
Sbjct: 839 ccaccgcgccgccgagctccgc 818



to top

>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full
           insert sequence
          Length = 1360

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 280 ttgctcaatgatccatctataaaggagatggcagatcagattgcaagggaccctgcattc 339
           ||||||||||||||    |||||||||||||| || ||||| || | |||||| || |||
Sbjct: 184 ttgctcaatgatccgagcataaaggagatggcggagcagatcgccaaggacccggcgttc 243

                                     
Query: 340 aatcagatggctgagcagctacagaa 365
           |   ||||||| |||||||| |||||
Sbjct: 244 acggagatggcggagcagctgcagaa 269



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 45       ccaccgcgccgccgagctccgc 66
                ||||||||||||||||||||||
Sbjct: 24165432 ccaccgcgccgccgagctccgc 24165411



to top

>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 45     ccaccgcgccgccgagctccgc 66
              ||||||||||||||||||||||
Sbjct: 121917 ccaccgcgccgccgagctccgc 121896



to top

>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 45    ccaccgcgccgccgagctccgc 66
             ||||||||||||||||||||||
Sbjct: 14000 ccaccgcgccgccgagctccgc 13979



to top

>ref|XM_527135.1| PREDICTED: Pan troglodytes LOC471757 (LOC471757), mRNA
          Length = 972

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 756 ctccagctgccgctgcaggct 736



to top

>gb|BC000745.2| Homo sapiens MAX dimerization protein 3, mRNA (cDNA clone MGC:2383
           IMAGE:2821596), complete cds
          Length = 1082

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 455 ctccagctgccgctgcaggct 435



to top

>gb|BC041690.1| Homo sapiens MAX dimerization protein 3, mRNA (cDNA clone
            IMAGE:5240341), containing frame-shift errors
          Length = 1926

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  ctccagctgccgctgcaggct 244
            |||||||||||||||||||||
Sbjct: 1258 ctccagctgccgctgcaggct 1238



to top

>gb|BC032586.1| Homo sapiens MAX dimerization protein 3, mRNA (cDNA clone
           IMAGE:5500679), containing frame-shift errors
          Length = 1154

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 470 ctccagctgccgctgcaggct 450



to top

>gb|AC146507.2| Homo sapiens chromosome 5 clone CTD-2301A4, complete sequence
          Length = 144503

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   ctccagctgccgctgcaggct 244
             |||||||||||||||||||||
Sbjct: 73678 ctccagctgccgctgcaggct 73698



to top

>ref|XM_860540.1| PREDICTED: Canis familiaris similar to MAX dimerization protein 3,
           transcript variant 2 (LOC489093), mRNA
          Length = 979

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 375 ctccagctgccgctgcaggct 355



to top

>ref|XM_546209.2| PREDICTED: Canis familiaris similar to MAX dimerization protein 3,
           transcript variant 1 (LOC489093), mRNA
          Length = 1009

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 405 ctccagctgccgctgcaggct 385



to top

>ref|NM_031300.2| Homo sapiens MAX dimerization protein 3 (MXD3), mRNA
          Length = 1082

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 455 ctccagctgccgctgcaggct 435



to top

>gb|AC108734.10| Homo sapiens 3 BAC RP11-259P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125990

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 349   gctgagcagctacagaaaggt 369
             |||||||||||||||||||||
Sbjct: 83386 gctgagcagctacagaaaggt 83366



to top

>emb|AL833959.1|HSM805173 Homo sapiens mRNA; cDNA DKFZp434F1815 (from clone DKFZp434F1815)
          Length = 2139

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  ctccagctgccgctgcaggct 244
            |||||||||||||||||||||
Sbjct: 1512 ctccagctgccgctgcaggct 1492



to top

>emb|CR626344.1| full-length cDNA clone CS0DD009YK07 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 465 ctccagctgccgctgcaggct 445



to top

>emb|CR613684.1| full-length cDNA clone CS0DD001YD18 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 420 ctccagctgccgctgcaggct 400



to top

>dbj|AK092842.1| Homo sapiens cDNA FLJ35523 fis, clone SPLEN2001503
          Length = 2560

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 183 ctccagctgccgctgcaggct 163



to top

>dbj|AK057034.1| Homo sapiens cDNA FLJ32472 fis, clone SKNMC2000356, highly similar
           to Mus musculus Max-interacting transcriptional
           repressor (Mad3) mRNA
          Length = 2269

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 473 ctccagctgccgctgcaggct 453



to top

>emb|CR596072.1| full-length cDNA clone CS0DF021YP10 of Fetal brain of Homo sapiens
            (human)
          Length = 2279

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  ctccagctgccgctgcaggct 244
            |||||||||||||||||||||
Sbjct: 1253 ctccagctgccgctgcaggct 1233



to top

>emb|CR595562.1| full-length cDNA clone CS0DB009YI06 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1465

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 ctccagctgccgctgcaggct 244
           |||||||||||||||||||||
Sbjct: 884 ctccagctgccgctgcaggct 864



to top

>gb|AC112170.2| Homo sapiens chromosome 5 clone CTD-2018G4, complete sequence
          Length = 76631

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 224   ctccagctgccgctgcaggct 244
             |||||||||||||||||||||
Sbjct: 73338 ctccagctgccgctgcaggct 73318



to top

>gb|AC110005.2| Homo sapiens chromosome 5 clone RP11-265K23, complete sequence
          Length = 184157

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 224   ctccagctgccgctgcaggct 244
             |||||||||||||||||||||
Sbjct: 67577 ctccagctgccgctgcaggct 67557



to top

>emb|BX649404.8| Zebrafish DNA sequence from clone CH211-285O15 in linkage group 22,
             complete sequence
          Length = 154434

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 266   cttctatgcaaagtttgctcaatga 290
             |||||||||||||||| ||||||||
Sbjct: 96890 cttctatgcaaagttttctcaatga 96914



to top

>gb|AY107770.1| Zea mays PCO087426 mRNA sequence
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 aaggagatggcagatcagattgcaagggaccctgcattcaatcagatggctgagcagcta 360
           |||||||||||||| ||||| || | |||||| || ||||   ||||||| |||||||| 
Sbjct: 276 aaggagatggcagagcagatcgccaaggacccggcgttcacggagatggcggagcagctg 335

                
Query: 361 cagaa 365
           |||||
Sbjct: 336 cagaa 340



to top

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 53     ccgccgagctccgcctccgggcgac 77
              |||||||||||||||| ||||||||
Sbjct: 578911 ccgccgagctccgcctgcgggcgac 578887



to top

>ref|XM_482561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1675

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 48  ccgcgccgccgagctccgcc 67
           ||||||||||||||||||||
Sbjct: 452 ccgcgccgccgagctccgcc 433



to top

>ref|XM_468465.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2914

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 35  ctctcctcccccaccgcgccgccg 58
           |||||||| |||||||||||||||
Sbjct: 612 ctctcctcgcccaccgcgccgccg 635



to top

>ref|XM_507063.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C04.8 mRNA
          Length = 2935

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 35  ctctcctcccccaccgcgccgccg 58
           |||||||| |||||||||||||||
Sbjct: 613 ctctcctcgcccaccgcgccgccg 636



to top

>ref|XM_519538.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC20460
            (LOC463908), mRNA
          Length = 1421

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   gccagcgctctctcctcccccacc 49
            |||| |||||||||||||||||||
Sbjct: 1043 gccatcgctctctcctcccccacc 1020



to top

>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   cctccagctgccgctgcagg 242
             ||||||||||||||||||||
Sbjct: 26541 cctccagctgccgctgcagg 26522



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 298      ataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatggctgagcag 357
                |||||||||||||| || ||||| || | |||||| || ||||   ||||||| ||||||
Sbjct: 35558376 ataaaggagatggcggagcagatcgccaaggacccggcgttcacggagatggcggagcag 35558435

                        
Query: 358      ctacagaa 365
                || |||||
Sbjct: 35558436 ctgcagaa 35558443



to top

>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0029P13, complete sequence
          Length = 158506

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   aaggagatggcagatcagat 320
             ||||||||||||||||||||
Sbjct: 77241 aaggagatggcagatcagat 77260



to top

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 44      cccaccgcgccgccgagctccgcc 67
               |||||||||||||||| |||||||
Sbjct: 5108782 cccaccgcgccgccgatctccgcc 5108759



to top

>ref|XM_387088.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06912.1)
            partial mRNA
          Length = 4857

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  ctataaaggagatggcagat 315
            ||||||||||||||||||||
Sbjct: 2174 ctataaaggagatggcagat 2193



to top

>ref|XM_801911.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511823.14) partial mRNA
          Length = 3388

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 3320 tcctccagctgccgctgcag 3301



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 3215 tcctccagctgccgctgcag 3196



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 3110 tcctccagctgccgctgcag 3091



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 3005 tcctccagctgccgctgcag 2986



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2900 tcctccagctgccgctgcag 2881



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2795 tcctccagctgccgctgcag 2776



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2690 tcctccagctgccgctgcag 2671



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2585 tcctccagctgccgctgcag 2566



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2480 tcctccagctgccgctgcag 2461



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2375 tcctccagctgccgctgcag 2356



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2270 tcctccagctgccgctgcag 2251



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2165 tcctccagctgccgctgcag 2146



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2060 tcctccagctgccgctgcag 2041



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1955 tcctccagctgccgctgcag 1936



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1850 tcctccagctgccgctgcag 1831



to top

>ref|XM_811656.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511821.179) partial mRNA
          Length = 3718

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 2196 tcctccagctgccgctgcag 2177



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1986 tcctccagctgccgctgcag 1967



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1881 tcctccagctgccgctgcag 1862



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1776 tcctccagctgccgctgcag 1757



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1566 tcctccagctgccgctgcag 1547



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1356 tcctccagctgccgctgcag 1337



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1146 tcctccagctgccgctgcag 1127



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tcctccagctgccgctgcag 241
            ||||||||||||||||||||
Sbjct: 1041 tcctccagctgccgctgcag 1022



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 936 tcctccagctgccgctgcag 917



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 831 tcctccagctgccgctgcag 812



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 726 tcctccagctgccgctgcag 707



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 621 tcctccagctgccgctgcag 602



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 516 tcctccagctgccgctgcag 497



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 411 tcctccagctgccgctgcag 392



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 306 tcctccagctgccgctgcag 287



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 201 tcctccagctgccgctgcag 182



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tcctccagctgccgctgcag 241
           ||||||||||||||||||||
Sbjct: 96  tcctccagctgccgctgcag 77



to top

>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence
          Length = 110038

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   tcaaggtgttcctccagctg 232
             ||||||||||||||||||||
Sbjct: 45119 tcaaggtgttcctccagctg 45138



to top

>ref|XM_793038.1| PREDICTED: Strongylocentrotus purpuratus similar to RAN binding
            protein 2 (LOC593568), mRNA
          Length = 2994

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 217  ggtgttcctccagctgccgctgcaggct 244
            |||| |||||||||||| ||||||||||
Sbjct: 1583 ggtgatcctccagctgctgctgcaggct 1556



to top

>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown,
              complete sequence
          Length = 188107

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    cctccagctgccgctgcagg 242
              ||||||||||||||||||||
Sbjct: 138477 cctccagctgccgctgcagg 138496



to top

>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    agatggctgagcagctacag 363
              ||||||||||||||||||||
Sbjct: 141727 agatggctgagcagctacag 141708



to top

>gb|AY036888.1| Brassica napus MADS-box protein (FLC1) mRNA, complete cds
          Length = 845

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 tcaaggtgttcctccagctg 232
           ||||||||||||||||||||
Sbjct: 441 tcaaggtgttcctccagctg 422



to top

>gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosome 16, complete sequence
          Length = 224155

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tttcttctatgcaaagtttg 282
              ||||||||||||||||||||
Sbjct: 212480 tttcttctatgcaaagtttg 212461



to top

>dbj|AK043628.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830013O05 product:Hypothetical tyrosine
            protein kinase/serine/threonine protein kinase/eukaryotic
            protein kinase containing protein, full insert sequence
          Length = 4630

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  agatggctgagcagctacag 363
            ||||||||||||||||||||
Sbjct: 3380 agatggctgagcagctacag 3399



to top

>dbj|AK043477.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730098P15 product:hypothetical
           protein, full insert sequence
          Length = 2639

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 agatggctgagcagctacag 363
           ||||||||||||||||||||
Sbjct: 95  agatggctgagcagctacag 114



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 301      aaggagatggcagatcagat 320
                ||||||||||||||||||||
Sbjct: 25350228 aaggagatggcagatcagat 25350247



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 223      cctccagctgccgctgcagg 242
                ||||||||||||||||||||
Sbjct: 16527802 cctccagctgccgctgcagg 16527783



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 298      ataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatggctgagcag 357
                |||||||||||||| || ||||| || | |||||| || ||||   ||||||| ||||||
Sbjct: 35648448 ataaaggagatggcggagcagatcgccaaggacccggcgttcacggagatggcggagcag 35648507

                        
Query: 358      ctacagaa 365
                || |||||
Sbjct: 35648508 ctgcagaa 35648515



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 35       ctctcctcccccaccgcgccgccg 58
                |||||||| |||||||||||||||
Sbjct: 35381977 ctctcctcgcccaccgcgccgccg 35382000



to top

>dbj|AK222579.1| Homo sapiens mRNA for MAX dimerization protein 3 variant, clone:
           CAS03507
          Length = 1079

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ctccagctgccgctgcaggc 243
           ||||||||||||||||||||
Sbjct: 471 ctccagctgccgctgcaggc 452



to top

>ref|XM_224620.3| PREDICTED: Rattus norvegicus similar to Ankyrin repeat domain protein
            28 (LOC306264), mRNA
          Length = 5203

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  ttcctccagctgccgctgca 240
            ||||||||||||||||||||
Sbjct: 1305 ttcctccagctgccgctgca 1286



to top

>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 298   ataaaggagatggcagatcagattgcaagggaccctgcattcaatcagatggctgagcag 357
             |||||||||||||| || ||||| || | |||||| || ||||   ||||||| ||||||
Sbjct: 91339 ataaaggagatggcggagcagatcgccaaggacccggcgttcacggagatggcggagcag 91398

                     
Query: 358   ctacagaa 365
             || |||||
Sbjct: 91399 ctgcagaa 91406



to top

>gb|AY115678.1| Brassica rapa FLC1 (FLC1) gene, exons 2 through 7 and partial cds
          Length = 1651

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 tcaaggtgttcctccagctg 232
           ||||||||||||||||||||
Sbjct: 675 tcaaggtgttcctccagctg 656



to top

>gb|AY115674.1| Brassica oleracea FLC1 (FLC1) gene, exons 2 through 7 and partial
           cds
          Length = 1395

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 tcaaggtgttcctccagctg 232
           ||||||||||||||||||||
Sbjct: 690 tcaaggtgttcctccagctg 671



to top

>emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 in linkage group 7,
             complete sequence
          Length = 102546

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   cagggtgcaggagaacaggg 392
             ||||||||||||||||||||
Sbjct: 73726 cagggtgcaggagaacaggg 73707



to top

>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C04
          Length = 103194

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    ctctcctcccccaccgcgccgccg 58
             |||||||| |||||||||||||||
Sbjct: 42525 ctctcctcgcccaccgcgccgccg 42548



to top

>dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12, map 22, complete
              sequences
          Length = 189474

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gctctctcctcccccaccgc 51
              ||||||||||||||||||||
Sbjct: 153031 gctctctcctcccccaccgc 153050



to top

>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0413H11
          Length = 147655

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ccgcgccgccgagctccgcc 67
             ||||||||||||||||||||
Sbjct: 55564 ccgcgccgccgagctccgcc 55583



to top

>dbj|AK099915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F10, full
           insert sequence
          Length = 2913

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 35  ctctcctcccccaccgcgccgccg 58
           |||||||| |||||||||||||||
Sbjct: 613 ctctcctcgcccaccgcgccgccg 636



to top

>dbj|AK074002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076B20, full
           insert sequence
          Length = 3255

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 aaggagatggcagatcagat 320
           ||||||||||||||||||||
Sbjct: 758 aaggagatggcagatcagat 777



to top

>dbj|AK070338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049D17, full
           insert sequence
          Length = 1763

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 48  ccgcgccgccgagctccgcc 67
           ||||||||||||||||||||
Sbjct: 451 ccgcgccgccgagctccgcc 432



to top

>dbj|AK069544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A15, full
           insert sequence
          Length = 2935

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 35  ctctcctcccccaccgcgccgccg 58
           |||||||| |||||||||||||||
Sbjct: 613 ctctcctcgcccaccgcgccgccg 636



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 301      aaggagatggcagatcagat 320
                ||||||||||||||||||||
Sbjct: 25668898 aaggagatggcagatcagat 25668917



to top

>gb|AC149346.2| Phakopsora pachyrhizi clone JGIAFNA-33E14, complete sequence
          Length = 38941

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 218  gtgttcctccagctgccgct 237
            ||||||||||||||||||||
Sbjct: 7434 gtgttcctccagctgccgct 7453



to top

>emb|AL162632.4|CNS01RHX Human chromosome 14 DNA sequence BAC R-454K7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161417

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   agcagctacagaaaggtgct 372
             ||||||||||||||||||||
Sbjct: 59941 agcagctacagaaaggtgct 59960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,683,867
Number of Sequences: 3902068
Number of extensions: 3683867
Number of successful extensions: 76680
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76111
Number of HSP's gapped (non-prelim): 566
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top