ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart60d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483357.1| Oryza sativa (japonica cultivar-group), mRNA 113 5e-22
2dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
3dbj|AK101485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
5dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
7gb|AY105495.1| Zea mays PCO099382 mRNA sequence 56 1e-04
8gb|BC029285.1| Homo sapiens, clone IMAGE:5191918, mRNA 52 0.002
9gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, comple... 50 0.006
10dbj|AK109201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
11ref|XM_470282.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.096
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.096
13gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 46 0.096
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
15dbj|AK121575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.096
16ref|XM_754380.1| Ustilago maydis 521 hypothetical protein (UM033... 44 0.38
17gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 1.5
18ref|NM_001030953.1| Gallus gallus squalene epoxidase (SQLE), mRNA 42 1.5
19ref|XM_747223.1| Aspergillus fumigatus Af293 hypothetical protei... 42 1.5
20emb|AJ720030.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.5
21gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence 42 1.5
22gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.5
23dbj|AB056583.1| Streptomyces griseus epoA, ORF1, ORF2 genes for ... 42 1.5
24gb|AF257237.1|AF257237 Rattus norvegicus oxytocin receptor mRNA,... 42 1.5
25dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.5
26dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
27gb|AC127330.4| Mus musculus BAC clone RP23-126N22 from 6, comple... 42 1.5
28emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide... 42 1.5
29dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.5
30gb|BC052410.1| Mus musculus angiogenic factor with G patch and F... 40 5.9
31gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
32gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.9
33gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 40 5.9
34gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.9
35gb|AY500995.1| Mus musculus angiogenic factor VG5Q mRNA, complet... 40 5.9
36ref|XM_543305.2| PREDICTED: Canis familiaris similar to integrin... 40 5.9
37emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 40 5.9
38emb|BX571673.8| Human DNA sequence from clone RP11-323D18 on chr... 40 5.9
39gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 5.9
40gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.9
41emb|AL160058.8| Human DNA sequence from clone RP11-280O1 on chro... 40 5.9
42emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
43gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 40 5.9
44gb|AF126429.1| Streptomyces venezuelae JadJ (jadJ), jadomycin po... 40 5.9
45gb|BC020332.1| Mus musculus THO complex 5, mRNA (cDNA clone IMAG... 40 5.9
46gb|BC039758.1| Mus musculus THO complex 5, mRNA (cDNA clone MGC:... 40 5.9
47dbj|AB182258.1| Sus scrofa genes for transforming growth factor,... 40 5.9
48ref|NM_167565.1| Drosophila melanogaster Fimbrin CG8649-RD, tran... 40 5.9
49ref|NM_167564.1| Drosophila melanogaster Fimbrin CG8649-RC, tran... 40 5.9
50ref|NM_078661.3| Drosophila melanogaster Fimbrin CG8649-RA, tran... 40 5.9
51dbj|AK132575.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 5.9
52ref|NM_025630.2| Mus musculus angiogenic factor with G patch and... 40 5.9
53gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F... 40 5.9
54gb|AY069342.1| Drosophila melanogaster LD05347 full length cDNA 40 5.9
55ref|XM_939982.1| PREDICTED: Homo sapiens similar to Beclin-1 (Co... 40 5.9
56ref|XM_497740.2| PREDICTED: Homo sapiens similar to Beclin-1 (Co... 40 5.9
57gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.9
58gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.9
59dbj|AK008399.1| Mus musculus adult male small intestine cDNA, RI... 40 5.9
60dbj|AK008168.1| Mus musculus adult male small intestine cDNA, RI... 40 5.9
61dbj|AK017248.1| Mus musculus 6 days neonate head cDNA, RIKEN ful... 40 5.9
62gb|AC012096.8|AC012096 Drosophila melanogaster, chromosome X, re... 40 5.9
63dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
64dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
65emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
66dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.9
67gb|AE004656.1| Pseudomonas aeruginosa PAO1, section 217 of 529 o... 40 5.9
68ref|XM_573645.1| PREDICTED: Rattus norvegicus Fms interacting pr... 40 5.9
69gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.9
70emb|Z98199.1|BHVUS12 Bovine herpesvirus 1 genomic US region 40 5.9
71dbj|AK110149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
72dbj|AK108681.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
73gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 ... 40 5.9
74dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 40 5.9
75gb|BC079058.1| Rattus norvegicus Fms interacting protein, mRNA (... 40 5.9
76ref|NM_001012153.1| Rattus norvegicus Fms interacting protein (F... 40 5.9
77gb|AF053225.1|AF053225 Drosophila melanogaster fimbrin mRNA, com... 40 5.9
78gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, comple... 40 5.9 
>ref|XM_483357.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1922

 Score =  113 bits (57), Expect = 5e-22
 Identities = 180/221 (81%)
 Strand = Plus / Plus

                                                                       
Query: 221 caaggaggccgccgaggcggccgcgctccgggcggagctggcgcagctcagggagaagat 280
           ||||||||  || |||||||  |||||| |||||||||||  |||||| ||||| |||||
Sbjct: 318 caaggaggaggcggaggcggtggcgctcagggcggagctgcagcagctgagggataagat 377

                                                                       
Query: 281 ctccgccttagagtcagacatcgcagacagatcccaggacctgaagagcaaggatgatgg 340
           ||||| | |||| ||||  ||| ||||  ||||| |||| ||||||   ||||||||| |
Sbjct: 378 ctccggcctagaatcaggaatctcagaacgatccaaggaactgaaggctaaggatgatag 437

                                                                       
Query: 341 catcgcgaagctggagaaggacattggggacaagtcacagaagattgctactctgcagag 400
           ||| || ||| ||||||||  ||| | ||| |||||||||||||||||| ||||||||||
Sbjct: 438 catagcaaagttggagaagctcatcgaggagaagtcacagaagattgcttctctgcagag 497

                                                    
Query: 401 cgagatcacatctctccagaaaacgggttctgtagctgctg 441
           |||||| || || ||||||  || ||| ||||| |||||||
Sbjct: 498 cgagattacttccctccaggcaaaggggtctgtggctgctg 538
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>dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N10, full
           insert sequence
          Length = 1922

 Score =  113 bits (57), Expect = 5e-22
 Identities = 180/221 (81%)
 Strand = Plus / Plus

                                                                       
Query: 221 caaggaggccgccgaggcggccgcgctccgggcggagctggcgcagctcagggagaagat 280
           ||||||||  || |||||||  |||||| |||||||||||  |||||| ||||| |||||
Sbjct: 317 caaggaggaggcggaggcggtggcgctcagggcggagctgcagcagctgagggataagat 376

                                                                       
Query: 281 ctccgccttagagtcagacatcgcagacagatcccaggacctgaagagcaaggatgatgg 340
           ||||| | |||| ||||  ||| ||||  ||||| |||| ||||||   ||||||||| |
Sbjct: 377 ctccggcctagaatcaggaatctcagaacgatccaaggaactgaaggctaaggatgatag 436

                                                                       
Query: 341 catcgcgaagctggagaaggacattggggacaagtcacagaagattgctactctgcagag 400
           ||| || ||| ||||||||  ||| | ||| |||||||||||||||||| ||||||||||
Sbjct: 437 catagcaaagttggagaagctcatcgaggagaagtcacagaagattgcttctctgcagag 496

                                                    
Query: 401 cgagatcacatctctccagaaaacgggttctgtagctgctg 441
           |||||| || || ||||||  || ||| ||||| |||||||
Sbjct: 497 cgagattacttccctccaggcaaaggggtctgtggctgctg 537
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>dbj|AK101485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K01, full
           insert sequence
          Length = 1859

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 143/174 (82%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 234 gaggcggccgcgctccgggcggagctggcgcagctcagggagaagatctccgccttagag 293
           |||| ||| ||||||  ||| |||||||  |||||||||| |||||||||||||||||||
Sbjct: 240 gaggaggcggcgctcgcggccgagctgggccagctcagggcgaagatctccgccttagag 299

                                                                       
Query: 294 tcagacatcgcaga-cagatcccaggacctgaagagcaaggatgatggcatcgcgaagct 352
           ||   |||  || | |||| |||||||  |||||||||||||||| ||||||  ||||||
Sbjct: 300 tcgagcataacaaaacaga-cccaggagttgaagagcaaggatgacggcatccagaagct 358

                                                                 
Query: 353 ggagaaggacattggggacaagtcacagaagattgctactctgcagagcgagat 406
           ||| |||   |||| ||| |||||| |||| |||||||| |||||||| |||||
Sbjct: 359 ggaaaagcttattgaggagaagtcaaagaaaattgctaccctgcagagtgagat 412
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                            
Query: 330      aaggatgatggcatcgcgaagctggagaaggacattggggacaagtcacagaagattgct 389
                ||||||||| |||| || ||| ||||||||  ||| | ||| ||||||||||||||||||
Sbjct: 25795495 aaggatgatagcatagcaaagttggagaagctcatcgaggagaagtcacagaagattgct 25795436

                                              
Query: 390      actctgcagagcgagatcacatctctccag 419
                 |||||||||||||||| || || ||||||
Sbjct: 25795435 tctctgcagagcgagattacttccctccag 25795406



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 221      caaggaggccgccgaggcggccgcgctccgggcggagctggcgcagctcagggagaagat 280
                ||||||||  || |||||||  |||||| |||||||||||  |||||| ||||| |||||
Sbjct: 25796486 caaggaggaggcggaggcggtggcgctcagggcggagctgcagcagctgagggataagat 25796427

                     
Query: 281      ctccg 285
                |||||
Sbjct: 25796426 ctccg 25796422
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>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689E12
          Length = 147516

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                         
Query: 330   aaggatgatggcatcgcgaagctggagaaggacattggggacaagtcacagaagattgct 389
             ||||||||| |||| || ||| ||||||||  ||| | ||| ||||||||||||||||||
Sbjct: 67706 aaggatgatagcatagcaaagttggagaagctcatcgaggagaagtcacagaagattgct 67647

                                           
Query: 390   actctgcagagcgagatcacatctctccag 419
              |||||||||||||||| || || ||||||
Sbjct: 67646 tctctgcagagcgagattacttccctccag 67617



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 221   caaggaggccgccgaggcggccgcgctccgggcggagctggcgcagctcagggagaagat 280
             ||||||||  || |||||||  |||||| |||||||||||  |||||| ||||| |||||
Sbjct: 68697 caaggaggaggcggaggcggtggcgctcagggcggagctgcagcagctgagggataagat 68638

                  
Query: 281   ctccg 285
             |||||
Sbjct: 68637 ctccg 68633
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                            
Query: 313      cccaggacctgaagagcaaggatgatggcatcgcgaagctggagaaggacattggggaca 372
                |||||||  |||||||||||||||| ||||||  ||||||||| |||   |||| ||| |
Sbjct: 18954693 cccaggagttgaagagcaaggatgacggcatccagaagctggaaaagcttattgaggaga 18954752

                                                  
Query: 373      agtcacagaagattgctactctgcagagcgagat 406
                ||||| |||| |||||||| |||||||| |||||
Sbjct: 18954753 agtcaaagaaaattgctaccctgcagagtgagat 18954786



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 234      gaggcggccgcgctccgggcggagctggcgcagctcagggagaagatctccgccttag 291
                |||| ||| ||||||  ||| |||||||  |||||||||| |||||||||||||||||
Sbjct: 18953875 gaggaggcggcgctcgcggccgagctgggccagctcagggcgaagatctccgccttag 18953932



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 324      aagagcaaggatgatggcat 343
                ||||||||||||||||||||
Sbjct: 21828418 aagagcaaggatgatggcat 21828437
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>gb|AY105495.1| Zea mays PCO099382 mRNA sequence
          Length = 1104

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 243 gcgctccgggcggagctggcgcagctcagggagaagatctccgccttagagtcagacatc 302
           |||||| |||| ||||||| ||| ||| ||| ||||||||| ||  ||||||||||||| 
Sbjct: 304 gcgctcagggccgagctggggcaactccgggcgaagatctcggcgctagagtcagacata 363

                                                                   
Query: 303 gcagacagatcccaggacctgaagagcaaggatgatggcatcgcgaagctggagaa 358
           | |||  |||| || || |||||||  |||||||||| ||||  ||| ||||||||
Sbjct: 364 gaagagcgatctcaagaactgaagaataaggatgatgccatcatgaacctggagaa 419
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>gb|BC029285.1| Homo sapiens, clone IMAGE:5191918, mRNA
          Length = 198

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 219 gtcaaggaggccgccgaggcggccgc 244
           ||||||||||||||||||||||||||
Sbjct: 173 gtcaaggaggccgccgaggcggccgc 198



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 39/45 (86%), Gaps = 4/45 (8%)
 Strand = Plus / Plus

                                                       
Query: 37 cggtcgcggtcgcgg----tcgatagaaacgaaggattttgggtt 77
          |||||||||||||||    ||||||||| ||||||||| ||||||
Sbjct: 1  cggtcgcggtcgcgggctttcgatagaaccgaaggattctgggtt 45
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>gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, complete sequence
          Length = 1735

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 290  agagtcagacatcgcagacagatcccaggacctgaagagcaaggatgatggcatcgcgaa 349
            |||||||||||| |||||  |||| ||||  |||||||  ||||| |||| |||||||||
Sbjct: 1579 agagtcagacatagcagagcgatctcaggtactgaagaataaggacgatgtcatcgcgaa 1520

                     
Query: 350  gctggagaa 358
             ||||||||
Sbjct: 1519 cctggagaa 1511
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>dbj|AK109201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C03, full
           insert sequence
          Length = 898

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 221 caaggaggccgccgaggcggccgcgctccgggcggagctggcgcagctcagggagaagat 280
           ||||||||  || |||||||  |||||| |||||||||||  |||||| ||||| |||||
Sbjct: 292 caaggaggaggcggaggcggtggcgctcagggcggagctgcagcagctgagggataagat 233

                
Query: 281 ctccg 285
           |||||
Sbjct: 232 ctccg 228
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>ref|XM_470282.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 221 caaggaggccgccgaggcggccg 243
           |||||||||||||||||||||||
Sbjct: 438 caaggaggccgccgaggcggccg 460
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 221     caaggaggccgccgaggcggccg 243
               |||||||||||||||||||||||
Sbjct: 3660981 caaggaggccgccgaggcggccg 3660959
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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
              sequence
          Length = 160738

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 221    caaggaggccgccgaggcggccg 243
              |||||||||||||||||||||||
Sbjct: 120396 caaggaggccgccgaggcggccg 120418
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 221     caaggaggccgccgaggcggccg 243
               |||||||||||||||||||||||
Sbjct: 3661092 caaggaggccgccgaggcggccg 3661070
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>dbj|AK121575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036H02, full
           insert sequence
          Length = 1540

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 221 caaggaggccgccgaggcggccg 243
           |||||||||||||||||||||||
Sbjct: 527 caaggaggccgccgaggcggccg 549
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>ref|XM_754380.1| Ustilago maydis 521 hypothetical protein (UM03326.1) partial mRNA
          Length = 3876

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 36   gcggtcgcggtcgcggtcgata 57
            ||||||||||||||||||||||
Sbjct: 3588 gcggtcgcggtcgcggtcgata 3567
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 234   gaggcggccgcgctccgggcg 254
             |||||||||||||||||||||
Sbjct: 98717 gaggcggccgcgctccgggcg 98697
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>ref|NM_001030953.1| Gallus gallus squalene epoxidase (SQLE), mRNA
          Length = 2659

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 235 aggcggccgcgctccgggcgg 255
           |||||||||||||||||||||
Sbjct: 137 aggcggccgcgctccgggcgg 117
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>ref|XM_747223.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g09490)
           partial mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 35  ggcggtcgcggtcgcggtcga 55
           |||||||||||||||||||||
Sbjct: 610 ggcggtcgcggtcgcggtcga 630
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>emb|AJ720030.1| Gallus gallus mRNA for hypothetical protein, clone 9l3
          Length = 2659

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 235 aggcggccgcgctccgggcgg 255
           |||||||||||||||||||||
Sbjct: 137 aggcggccgcgctccgggcgg 117
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>gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence
          Length = 180097

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 353   ggagaaggacattggggacaa 373
             |||||||||||||||||||||
Sbjct: 90449 ggagaaggacattggggacaa 90469
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 224     ggaggccgccgaggcggccgc 244
               |||||||||||||||||||||
Sbjct: 3432445 ggaggccgccgaggcggccgc 3432465
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>dbj|AB056583.1| Streptomyces griseus epoA, ORF1, ORF2 genes for EpoA, hypothetical
            protein, putative transcriptional regulator, complete and
            partial cds
          Length = 4573

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 245  gctccgggcggagctggcgca 265
            |||||||||||||||||||||
Sbjct: 2472 gctccgggcggagctggcgca 2492
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>gb|AF257237.1|AF257237 Rattus norvegicus oxytocin receptor mRNA, partial cds
          Length = 1139

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 30  tccctggcggtcgcggtcgcggtcg 54
           ||||||| |||||||||||||||||
Sbjct: 163 tccctggaggtcgcggtcgcggtcg 187
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 220     tcaaggaggccgccgaggcgg 240
               |||||||||||||||||||||
Sbjct: 2179552 tcaaggaggccgccgaggcgg 2179532
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 227     ggccgccgaggcggccgcgct 247
               |||||||||||||||||||||
Sbjct: 5381666 ggccgccgaggcggccgcgct 5381646
to top
>gb|AC127330.4| Mus musculus BAC clone RP23-126N22 from 6, complete sequence
          Length = 211663

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   gaagctggagaaggacattgg 367
             |||||||||||||||||||||
Sbjct: 83194 gaagctggagaaggacattgg 83174
to top
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin
          Length = 107379

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    tggcggtcgcggtcgcggtcg 54
             |||||||||||||||||||||
Sbjct: 89208 tggcggtcgcggtcgcggtcg 89188
to top
>dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320a,
             complete sequence
          Length = 76227

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    gcggtcgcggtcgcggtcgat 56
             |||||||||||||||||||||
Sbjct: 10969 gcggtcgcggtcgcggtcgat 10989
to top
>gb|BC052410.1| Mus musculus angiogenic factor with G patch and FHA domains 1, mRNA
           (cDNA clone MGC:63399 IMAGE:5716440), complete cds
          Length = 3213

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 338 cggagctggcgcagctcagg 357
to top
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0065C11, complete sequence
          Length = 141578

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   gcggcggcgctggtgttcgc 148
             ||||||||||||||||||||
Sbjct: 26449 gcggcggcgctggtgttcgc 26430
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      gcggtcgcggtcgcggtcga 55
               ||||||||||||||||||||
Sbjct: 1619369 gcggtcgcggtcgcggtcga 1619350
to top
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   aagagcaaggatgatggcat 343
             ||||||||||||||||||||
Sbjct: 33852 aagagcaaggatgatggcat 33871
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     cggccgcgctccgggcggag 257
               ||||||||||||||||||||
Sbjct: 2219737 cggccgcgctccgggcggag 2219718
to top
>gb|AY500995.1| Mus musculus angiogenic factor VG5Q mRNA, complete cds
          Length = 3191

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 334 cggagctggcgcagctcagg 353
to top
>ref|XM_543305.2| PREDICTED: Canis familiaris similar to integrin-linked
          kinase-associated protein phosphatase 2C isoform 2,
          transcript variant 1 (LOC486179), mRNA
          Length = 1342

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 ggcggtcgcggtcgcggtcg 54
          ||||||||||||||||||||
Sbjct: 32 ggcggtcgcggtcgcggtcg 13
to top
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     ggcggtcgcggtcgcggtcg 54
              ||||||||||||||||||||
Sbjct: 114864 ggcggtcgcggtcgcggtcg 114883
to top
>emb|BX571673.8| Human DNA sequence from clone RP11-323D18 on chromosome 1 Contains a
             novel gene, a tubulin beta polypeptide 4 member Q
             (TUBB4Q) pseudogene, the 3' end of a  ribosomal protein
             L23a (RPL23A) pseudogene and a CpG island, complete
             sequence
          Length = 171915

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 233   cgaggcggccgcgctccgggcggagctg 260
             ||||||||| ||||| ||||||||||||
Sbjct: 60041 cgaggcggcggcgctgcgggcggagctg 60068
to top
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     tggcggtcgcggtcgcggtc 53
              ||||||||||||||||||||
Sbjct: 203797 tggcggtcgcggtcgcggtc 203778
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      gcggtcgcggtcgcggtcga 55
               ||||||||||||||||||||
Sbjct: 3229090 gcggtcgcggtcgcggtcga 3229071
to top
>emb|AL160058.8| Human DNA sequence from clone RP11-280O1 on chromosome 1 Contains the
             5' end of the LMX1A gene for alpha LIM homeobox
             transcription factor 1, the RXRG gene for gamma retinoid X
             receptor, the 3' end of a novel gene (FLJ35813) and two
             CpG islands, complete sequence
          Length = 155369

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   agattgctactctgcagagc 401
             ||||||||||||||||||||
Sbjct: 86798 agattgctactctgcagagc 86779
to top
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ggcggtcgcggtcgcggtcg 54
             ||||||||||||||||||||
Sbjct: 80561 ggcggtcgcggtcgcggtcg 80542
to top
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    gaggcggccgcgctccgggc 253
              ||||||||||||||||||||
Sbjct: 100329 gaggcggccgcgctccgggc 100310
to top
>gb|AF126429.1| Streptomyces venezuelae JadJ (jadJ), jadomycin polyketide synthase
            cyclase (jadI), jadomycin polyketide ketosynthase (jadA),
            chain length determinant, acyl carrier protein (acp),
            ketoreductase, and bifunctional cyclase/dehydrase genes,
            complete cds
          Length = 7064

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 219  gtcaaggaggccgccgaggcggcc 242
            |||| |||||||||||||||||||
Sbjct: 4319 gtcatggaggccgccgaggcggcc 4342
to top
>gb|BC020332.1| Mus musculus THO complex 5, mRNA (cDNA clone IMAGE:4021010)
          Length = 2218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ccaggacctgaagagcaagg 333
           ||||||||||||||||||||
Sbjct: 228 ccaggacctgaagagcaagg 247
to top
>gb|BC039758.1| Mus musculus THO complex 5, mRNA (cDNA clone MGC:49541
           IMAGE:3995737), complete cds
          Length = 2284

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ccaggacctgaagagcaagg 333
           ||||||||||||||||||||
Sbjct: 264 ccaggacctgaagagcaagg 283
to top
>dbj|AB182258.1| Sus scrofa genes for transforming growth factor, beta receptor 1,
           transforming growth factor, beta receptor 1(longer
           type), complete cds
          Length = 3939

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 gccgccgaggcggccgcgctccgg 251
           ||||||||||||||| ||||||||
Sbjct: 37  gccgccgaggcggcctcgctccgg 14
to top
>ref|NM_167565.1| Drosophila melanogaster Fimbrin CG8649-RD, transcript variant D
           (Fim), mRNA
          Length = 3236

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 ggacctgaagagcaaggatg 336
           ||||||||||||||||||||
Sbjct: 595 ggacctgaagagcaaggatg 614
to top
>ref|NM_167564.1| Drosophila melanogaster Fimbrin CG8649-RC, transcript variant C
           (Fim), mRNA
          Length = 3270

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 ggacctgaagagcaaggatg 336
           ||||||||||||||||||||
Sbjct: 629 ggacctgaagagcaaggatg 648
to top
>ref|NM_078661.3| Drosophila melanogaster Fimbrin CG8649-RA, transcript variant A
           (Fim), mRNA
          Length = 3437

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 ggacctgaagagcaaggatg 336
           ||||||||||||||||||||
Sbjct: 796 ggacctgaagagcaaggatg 815
to top
>dbj|AK132575.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4832423J12 product:Hypothetical
           D111/G-patch domain/forkhead-associated (FHA) domain
           containing protein (Adult male small intestine cDNA,
           RIKEN full-length enriched library, clone:2010111M23
           product:hypothetical D111/G-patch
           domain/forkhead-associated (FHA) domain containing
           protein, full insert sequence) (Fragment), full insert
           sequence
          Length = 2583

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 362 cggagctggcgcagctcagg 381
to top
>ref|NM_025630.2| Mus musculus angiogenic factor with G patch and FHA domains 1
           (Aggf1), mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 338 cggagctggcgcagctcagg 357
to top
>gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone
              BACR01K05, complete sequence
          Length = 162761

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ggacctgaagagcaaggatg 336
              ||||||||||||||||||||
Sbjct: 114027 ggacctgaagagcaaggatg 114046
to top
>gb|AY069342.1| Drosophila melanogaster LD05347 full length cDNA
          Length = 2826

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 ggacctgaagagcaaggatg 336
           ||||||||||||||||||||
Sbjct: 758 ggacctgaagagcaaggatg 777
to top
>ref|XM_939982.1| PREDICTED: Homo sapiens similar to Beclin-1 (Coiled-coil
           myosin-like BCL2-interacting protein) (LOC441925), mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 233 cgaggcggccgcgctccgggcggagctg 260
           ||||||||| ||||| ||||||||||||
Sbjct: 471 cgaggcggcggcgctgcgggcggagctg 498
to top
>ref|XM_497740.2| PREDICTED: Homo sapiens similar to Beclin-1 (Coiled-coil
           myosin-like BCL2-interacting protein) (LOC441925), mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 233 cgaggcggccgcgctccgggcggagctg 260
           ||||||||| ||||| ||||||||||||
Sbjct: 471 cgaggcggcggcgctgcgggcggagctg 498
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      ggcggtcgcggtcgcggtcg 54
               ||||||||||||||||||||
Sbjct: 3674136 ggcggtcgcggtcgcggtcg 3674117
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 225     gaggccgccgaggcggccgcgctc 248
               ||||||||||||||||||| ||||
Sbjct: 4194644 gaggccgccgaggcggccgggctc 4194621
to top
>dbj|AK008399.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010111M23 product:SIMILAR TO
           FETAL HYPOTHETICAL PROTEIN homolog [Homo sapiens], full
           insert sequence
          Length = 1093

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 334 cggagctggcgcagctcagg 353
to top
>dbj|AK008168.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010009L17 product:RIKEN cDNA
           2010009L17 gene, full insert sequence
          Length = 1093

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 334 cggagctggcgcagctcagg 353
to top
>dbj|AK017248.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched
           library, clone:5430400N13 product:hypothetical
           Arginine-rich region profile containing protein, full
           insert sequence
          Length = 1076

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cggagctggcgcagctcagg 272
           ||||||||||||||||||||
Sbjct: 319 cggagctggcgcagctcagg 338
to top
>gb|AC012096.8|AC012096 Drosophila melanogaster, chromosome X, region 15E-15F, BAC clone
              BACR18O02, complete sequence
          Length = 177793

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    ggacctgaagagcaaggatg 336
              ||||||||||||||||||||
Sbjct: 137187 ggacctgaagagcaaggatg 137168
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 35       ggcggtcgcggtcgcggtcg 54
                ||||||||||||||||||||
Sbjct: 22014639 ggcggtcgcggtcgcggtcg 22014620
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 129      gcggcggcgctggtgttcgc 148
                ||||||||||||||||||||
Sbjct: 14488444 gcggcggcgctggtgttcgc 14488425
to top
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20,
             complete sequence
          Length = 99855

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ggcggtcgcggtcgcggtcg 54
             ||||||||||||||||||||
Sbjct: 87210 ggcggtcgcggtcgcggtcg 87191
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     catcgcgaagctggagaagg 360
               ||||||||||||||||||||
Sbjct: 6364249 catcgcgaagctggagaagg 6364268
to top
>gb|AE004656.1| Pseudomonas aeruginosa PAO1, section 217 of 529 of the complete
            genome
          Length = 13104

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  ggccgccgaggcggccgcgc 246
            ||||||||||||||||||||
Sbjct: 3405 ggccgccgaggcggccgcgc 3386
to top
>ref|XM_573645.1| PREDICTED: Rattus norvegicus Fms interacting protein (predicted)
           (Fmip_predicted), mRNA
          Length = 2045

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ccaggacctgaagagcaagg 333
           ||||||||||||||||||||
Sbjct: 260 ccaggacctgaagagcaagg 279
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     ccgccgaggcggccgcgctc 248
               ||||||||||||||||||||
Sbjct: 4415094 ccgccgaggcggccgcgctc 4415075
to top
>emb|Z98199.1|BHVUS12 Bovine herpesvirus 1 genomic US region
          Length = 8599

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ggcggtcgcggtcgcggtcg 54
           ||||||||||||||||||||
Sbjct: 630 ggcggtcgcggtcgcggtcg 649
to top
>dbj|AK110149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-E03, full
            insert sequence
          Length = 3287

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ggcggtcgcggtcgcggtcg 54
            ||||||||||||||||||||
Sbjct: 2065 ggcggtcgcggtcgcggtcg 2046
to top
>dbj|AK108681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B06, full
           insert sequence
          Length = 1465

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 gcggcggcgctggtgttcgc 148
           ||||||||||||||||||||
Sbjct: 362 gcggcggcgctggtgttcgc 381
to top
>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete
             sequence
          Length = 314205

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ggacctgaagagcaaggatg 336
             ||||||||||||||||||||
Sbjct: 52372 ggacctgaagagcaaggatg 52353
to top
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   gaggcggccgcgctccgggc 253
             ||||||||||||||||||||
Sbjct: 91214 gaggcggccgcgctccgggc 91195
to top
>gb|BC079058.1| Rattus norvegicus Fms interacting protein, mRNA (cDNA clone
           MGC:94002 IMAGE:7115655), complete cds
          Length = 2227

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ccaggacctgaagagcaagg 333
           ||||||||||||||||||||
Sbjct: 227 ccaggacctgaagagcaagg 246
to top
>ref|NM_001012153.1| Rattus norvegicus Fms interacting protein (Fmip), mRNA
          Length = 2227

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ccaggacctgaagagcaagg 333
           ||||||||||||||||||||
Sbjct: 227 ccaggacctgaagagcaagg 246
to top
>gb|AF053225.1|AF053225 Drosophila melanogaster fimbrin mRNA, complete cds
          Length = 2765

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 317 ggacctgaagagcaaggatg 336
           ||||||||||||||||||||
Sbjct: 714 ggacctgaagagcaaggatg 733
to top
>gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, complete sequence
          Length = 201730

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    cggagctggcgcagctcagg 272
              ||||||||||||||||||||
Sbjct: 160439 cggagctggcgcagctcagg 160420


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,550,073
Number of Sequences: 3902068
Number of extensions: 2550073
Number of successful extensions: 54139
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52529
Number of HSP's gapped (non-prelim): 1610
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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