Clone Name | bart60d04 |
---|---|
Clone Library Name | barley_pub |
>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1| Length = 440 Score = 145 bits (366), Expect = 4e-35 Identities = 70/102 (68%), Positives = 81/102 (79%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDK 310 MDEEYDVIVLGTGL EC+LSGLLSVDG KVLH+DRNDYYG DS SLNL QL+ FR ++ Sbjct: 1 MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQ 60 Query: 311 PPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 P LG D+ VD+VPKF+MANG L LI+TDVT+Y+ FK Sbjct: 61 RPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFK 102
>GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 140 bits (352), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 140 bits (352), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 140 bits (352), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 140 bits (352), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 140 bits (352), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) (XAP-4) (Oligophrenin-2) Length = 447 Score = 140 bits (352), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 139 bits (351), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) (SMG p25A GDI) Length = 447 Score = 139 bits (351), Expect = 2e-33 Identities = 65/103 (63%), Positives = 86/103 (83%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+ L +L+K+F+ + Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 GPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 137 bits (346), Expect = 9e-33 Identities = 64/103 (62%), Positives = 83/103 (80%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+ L L+K+F+ Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 137 bits (345), Expect = 1e-32 Identities = 65/103 (63%), Positives = 82/103 (79%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+ L L+K+F Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PPA +G D+NVD++PKF+MANG LV+ L+ T+VT+YL FK Sbjct: 61 APPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFK 103
>GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 137 bits (344), Expect = 2e-32 Identities = 63/103 (61%), Positives = 84/103 (81%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLGTGL ECILSG+++V+G KVLHMDRN YYGG+S S+ L L+K+F+ Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PPA +G D+N+D++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 APPASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) (GDI-3) Length = 445 Score = 136 bits (343), Expect = 2e-32 Identities = 63/103 (61%), Positives = 84/103 (81%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGG+S S+ L L+K+F+ Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +PPA +G D+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK Sbjct: 61 QPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFK 103
>GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 136 bits (343), Expect = 2e-32 Identities = 63/103 (61%), Positives = 83/103 (80%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+ L L+K+++ Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRYKIPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PP +G D+NVD++PKF+MANG LV+ L++T+VT+YL FK Sbjct: 61 SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103
>GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) (GDI-3) Length = 445 Score = 136 bits (343), Expect = 2e-32 Identities = 63/103 (61%), Positives = 84/103 (81%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGG+S S+ L L+K+F+ Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +PPA +G D+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK Sbjct: 61 QPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFK 103
>GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Secretory| pathway GDP dissociation inhibitor) Length = 451 Score = 131 bits (329), Expect = 8e-31 Identities = 60/106 (56%), Positives = 83/106 (78%), Gaps = 4/106 (3%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFR---- 298 +D +YDVIVLGTG+ ECILSGLLSVDG KVLH+D+ D+YGG++ S+ L+QL++KF+ Sbjct: 6 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI 65 Query: 299 GEDKPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +++ + G D+NVD++PKF+MANG L LIHTDVT+Y+ FK Sbjct: 66 SKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFK 111
>GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 129 bits (324), Expect = 3e-30 Identities = 62/103 (60%), Positives = 80/103 (77%), Gaps = 1/103 (0%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 307 M+EEYDVIVLG ECILSG++SV+G KVLHMDRN YYGG+S S+ L L+K+F+ Sbjct: 1 MNEEYDVIVLGHTGTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60 Query: 308 KPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 PPA +G D+NVD++PKF+MANG LV+ L+ T+VT+YL FK Sbjct: 61 APPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFK 103
>RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase component A (Rab| escort protein) (REP) Length = 640 Score = 70.1 bits (170), Expect = 2e-12 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 17/115 (14%) Frame = +2 Query: 146 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGE------- 304 DV+++GTGL+E IL+ LS G +VLH+D N YYG ++L + QL KK+ G+ Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQL-KKWCGDVNSGKIH 63 Query: 305 ----------DKPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKA 439 ++ +S+DY +D+ PK M L+ LI + V +YL F++ Sbjct: 64 QFQDAQIYIPGGKQSNQYTSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQS 118
>RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase component A (Rab| escort protein) (REP) Length = 603 Score = 68.2 bits (165), Expect = 9e-12 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 16/121 (13%) Frame = +2 Query: 125 AAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKKFR 298 A ++ DV++ GTG+ E +L+ L+ G VLH+D+NDYYG S +L ++Q+ W Sbjct: 41 ATTPDKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWVNEV 100 Query: 299 GEDKPPAHLG--------------SSEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 E + SS D+ +D+ PK + A L+ LI + V +YL F+ Sbjct: 101 NEGSVSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQ 160 Query: 437 A 439 + Sbjct: 161 S 161
>RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase component A (Rab| escort protein homolog) (REP) Length = 511 Score = 59.7 bits (143), Expect = 3e-09 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 27/130 (20%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--------- 283 + E++D++V+GTG E ++ S G VLH+D N+YYG +S +++ L Sbjct: 5 LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64 Query: 284 -----------WKKFRGEDKPPAH-------LGSSEDYNVDMVPKFMMANGTLVRTLIHT 409 W E + A L S +++D+ P+ + A G LV+ LI + Sbjct: 65 PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124 Query: 410 DVTKYLSFKA 439 ++ +Y F+A Sbjct: 125 NICRYAEFRA 134
>RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase component A 1 (Rab| escort protein 1) (REP-1) (Choroideraemia protein) (TCD protein) Length = 653 Score = 51.6 bits (122), Expect = 9e-07 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%) Frame = +2 Query: 122 AAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 292 A + E+DVIV+GTGL E I++ S G +VLH+D YYGG+ S + + L W K Sbjct: 2 ADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLK 60 Score = 32.3 bits (72), Expect = 0.54 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +2 Query: 341 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +N+D+V K + + G L+ LI ++V++Y FK Sbjct: 227 FNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFK 258
>RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase component A 2 (Rab| escort protein 2) (REP-2) (Choroideraemia-like protein) Length = 621 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Frame = +2 Query: 122 AAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN--QLWKK 292 A + E+DV+++GTGL E IL+ S G +VLH+D YYGG+ S + Q W K Sbjct: 2 AEKLPTEFDVVIIGTGLPESILAAACSRSGQRVLHVDSRSYYGGNWASFSFTGLQSWLK 60 Score = 32.3 bits (72), Expect = 0.54 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +2 Query: 332 SEDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 S +N+D+V K + + G+L+ LI ++V++Y FK Sbjct: 225 SRRFNIDLVSKPLYSQGSLIDLLIKSNVSRYAEFK 259
>RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase component A 2 (Rab| escort protein 2) (REP-2) (Choroideraemia-like protein) Length = 656 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%) Frame = +2 Query: 140 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 292 E+DV+++GTGL E IL+ S G +VLH+D YYGG+ S + + L W K Sbjct: 8 EFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLK 60 Score = 35.0 bits (79), Expect = 0.083 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = +2 Query: 341 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +N+D+V K + + G L+ LI +DV++Y+ FK Sbjct: 229 FNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFK 260
>RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase component A 1 (Rab| escort protein 1) (REP-1) (Choroideraemia protein homolog) Length = 650 Score = 49.7 bits (117), Expect = 3e-06 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 292 + ++DVIV+GTGL E I++ S G +VLH+D YYGG+ S + + L W K Sbjct: 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK 60 Score = 30.8 bits (68), Expect = 1.6 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = +2 Query: 341 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +N+D+V + + + G L+ LI ++V++Y FK Sbjct: 224 FNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFK 255
>RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase component A 1 (Rab| escort protein 1) (REP-1) (Choroideraemia protein homolog) Length = 665 Score = 49.7 bits (117), Expect = 3e-06 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 292 + ++DVIV+GTGL E I++ S G +VLH+D YYGG+ S + + L W K Sbjct: 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK 60 Score = 32.3 bits (72), Expect = 0.54 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +2 Query: 341 YNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK 436 +N+D+V K + + G L+ LI ++V++Y FK Sbjct: 239 FNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFK 270
>FIXC_AZOCA (P26484) Protein fixC| Length = 435 Score = 35.4 bits (80), Expect = 0.063 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST------SLNLNQLWKK 292 +DE++D IV+G G+ + L+ GLKVL ++R +Y G + + L +L Sbjct: 2 IDEKFDAIVVGAGMAGNAATLTLARRGLKVLQLERGEYSGSKNVQGAILYADMLEKLVPD 61 Query: 293 FRGEDKPPAHLGSSEDYNVD 352 FR + AHL + +D Sbjct: 62 FRETRRWSAHLVEQRFWMLD 81
>3O1D_COMTE (Q06401) 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)| Length = 573 Score = 34.3 bits (77), Expect = 0.14 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = +2 Query: 134 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLW 286 ++EYD+IV+G+G C GLK L +++ + +GG S +L+ +W Sbjct: 3 EQEYDLIVVGSGAGACWAPIRAQEQGLKTLVVEKTELFGGTS-ALSGGGIW 52
>CRTS2_ONCHC (Q52QW2) Carotenoid isomerase 2, chloroplast precursor (EC 5.-.-.-)| (CrtISO2) (OcrtISO24) Length = 587 Score = 33.5 bits (75), Expect = 0.24 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +2 Query: 137 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 259 EEYD IV+G+G+ + + L+V G +VL +++ GG S Sbjct: 68 EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108
>CRTS1_ONCHC (Q52QW3) Carotenoid isomerase 1, chloroplast precursor (EC 5.-.-.-)| (CrtISO1) (OcrtISO22) Length = 587 Score = 33.5 bits (75), Expect = 0.24 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +2 Query: 137 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 259 EEYD IV+G+G+ + + L+V G +VL +++ GG S Sbjct: 68 EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108
>RETST_BRARE (Q5BLE8) Putative all-trans-retinol 13,14-reductase precursor (EC| 1.3.99.23) (All-trans-13,14-dihydroretinol saturase) (RetSat) Length = 607 Score = 33.1 bits (74), Expect = 0.31 Identities = 16/49 (32%), Positives = 31/49 (63%) Frame = +2 Query: 107 RQARCAAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 253 +Q A+ + E+ D +V+G+G+ ++ LL+ G KVL ++++D GG Sbjct: 51 KQGFLASRVPEDLDAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGG 99
>RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)| Length = 148 Score = 32.7 bits (73), Expect = 0.41 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 191 GLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPPAHLGSSEDYNVDMV 358 G + G++ H+ RN YY S+NL++LW E++ A S+ +D+V Sbjct: 51 GHIGKHGMRHFHLMRNQYY---CPSINLSKLWSLVTEEERQKAQTDKSKVILIDVV 103
>CRTSO_DAUCA (Q2VEX9) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)| (CrtISO) Length = 615 Score = 32.3 bits (72), Expect = 0.54 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = +2 Query: 140 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 259 EYD IV+G+G+ + + L+V G KVL +++ GG S Sbjct: 97 EYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYLIPGGSS 136
>FIXC_RHISN (Q53208) Protein fixC| Length = 435 Score = 32.3 bits (72), Expect = 0.54 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +2 Query: 134 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 250 +E +D IV+G G+ + ++ GLKVL ++R +Y G Sbjct: 3 EERFDAIVVGAGMSGNAAAYTMASRGLKVLQLERGEYPG 41
>ALOX_CANBO (Q00922) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methanol oxidase)| (MOX) Length = 663 Score = 32.3 bits (72), Expect = 0.54 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = +2 Query: 128 AMDEEYDVIVLGTGLKECILSG-LLSVD-GLKVLHMDRNDYYGGDSTSLNLNQLW 286 A+ EE+DVIV G G C+++G L +VD LKVL ++ + NLN W Sbjct: 2 AIPEEFDVIVCGGGSTGCVIAGRLANVDENLKVLLIENGEN--------NLNNPW 48
>GLF_MYCPN (P75499) UDP-galactopyranose mutase (EC 5.4.99.9)| Length = 399 Score = 32.0 bits (71), Expect = 0.70 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +2 Query: 140 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGD 256 ++D IVLG G+ +LS +L+ G VL +++ + GG+ Sbjct: 14 KFDFIVLGAGISGIVLSHVLAQHGKSVLLLEKRNQLGGN 52
>FIXC_RHIME (P09820) Protein fixC| Length = 435 Score = 32.0 bits (71), Expect = 0.70 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = +2 Query: 137 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 250 E++D IV+G G+ + ++ GLKVL ++R +Y G Sbjct: 4 EKFDAIVVGAGMSGNAAAYAMASRGLKVLQLERGEYPG 41
>FIXC_BRAJA (P10331) Protein fixC| Length = 435 Score = 32.0 bits (71), Expect = 0.70 Identities = 13/40 (32%), Positives = 25/40 (62%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 250 ++E +D IV+G G+ + ++ G+KVL ++R +Y G Sbjct: 2 IEERFDAIVVGAGMAGNAAALTMAKQGMKVLQLERGEYPG 41
>RETST_MACFA (Q64FG0) All-trans-retinol 13,14-reductase precursor (EC 1.3.99.23)| (All-trans-13,14-dihydroretinol saturase) (RetSat) Length = 610 Score = 31.6 bits (70), Expect = 0.91 Identities = 17/59 (28%), Positives = 33/59 (55%) Frame = +2 Query: 107 RQARCAAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL 283 +QA A+ + E+ DV+V+G+G + +L+ G +VL ++++ GG + N L Sbjct: 56 KQAFSASRVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGACHTFGENGL 114
>GLF_MYCGE (Q49398) UDP-galactopyranose mutase (EC 5.4.99.9)| Length = 404 Score = 31.6 bits (70), Expect = 0.91 Identities = 10/38 (26%), Positives = 26/38 (68%) Frame = +2 Query: 143 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGD 256 +D++++G G+ +L+ +L+ +VL +++ D+ GG+ Sbjct: 21 FDILIVGAGISGIVLANILANHNKRVLIVEKRDHIGGN 58
>FIXC_AZOVI (P53572) Protein fixC| Length = 427 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = +2 Query: 131 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 250 M E +DVIV+G G+ + L+ GLKVL ++R + G Sbjct: 1 MAERFDVIVVGAGMAGNAAAYTLAKGGLKVLQIERGETPG 40
>AOFN_ASPNG (P46882) Monoamine oxidase N (EC 1.4.3.4) (MAO-N)| Length = 495 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = +2 Query: 134 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN 277 D +DVIV+G G + L+V G K L ++ D GG S S N++ Sbjct: 37 DGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID 84
>CRTSO_LYCES (Q8S4R4) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)| (CrtISO) (Protein tangerine) Length = 615 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +2 Query: 143 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 259 YD IV+G+G+ + + L+V G KVL +++ GG S Sbjct: 98 YDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSS 136
>RETST_HUMAN (Q6NUM9) All-trans-retinol 13,14-reductase precursor (EC 1.3.99.23)| (All-trans-13,14-dihydroretinol saturase) (RetSat) Length = 610 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/59 (28%), Positives = 32/59 (54%) Frame = +2 Query: 107 RQARCAAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL 283 +QA A + E+ DV+V+G+G + +L+ G +VL ++++ GG + N L Sbjct: 56 KQAFSANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGL 114
>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene| epoxidase) (SE) Length = 457 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +2 Query: 137 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 238 ++ D+I++G G+ C L L G KVL ++R+ Sbjct: 4 QDADIIIIGAGITGCALGAALGRQGRKVLVLERD 37
>ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C| Length = 423 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 173 KECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPPAH 322 K I +VDG + L M +Y +L ++ KK G+D+ P+H Sbjct: 265 KNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLSGKDRVPSH 314
>GPDM_RAT (P35571) Glycerol-3-phosphate dehydrogenase, mitochondrial| precursor (EC 1.1.99.5) (GPD-M) (GPDH-M) Length = 727 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 140 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST 262 E+D++V+G G C + GLK ++RND+ G S+ Sbjct: 69 EFDILVIGGGATGCGCALDAVTRGLKTALVERNDFASGTSS 109
>Y921_MYCBO (P64752) Hypothetical protein Mb0921c| Length = 535 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +2 Query: 134 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSL 268 D ++DV+V+G G + + L+ GL+V ++R GG + S+ Sbjct: 5 DRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSI 49
>Y897_MYCTU (P64751) Hypothetical protein Rv0897c/MT0921| Length = 535 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +2 Query: 134 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSL 268 D ++DV+V+G G + + L+ GL+V ++R GG + S+ Sbjct: 5 DRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSI 49
>NUAM_ARATH (Q9FGI6) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) (75 kDa mitochondrial complex I subunit) Length = 748 Score = 29.3 bits (64), Expect = 4.5 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Frame = +2 Query: 107 RQARCAAAMDEEYDVIVLGTGL-----KECILSGLLSV-DGLKVLHMDRNDY-----YGG 253 R C A + + I++G GL K ILS + S+ V+ D N Y Sbjct: 499 RHPFCTALKNAKNPAIIVGAGLFNRTDKNAILSSVESIAQANNVVRPDWNGLNFLLQYAA 558 Query: 254 DSTSLNLNQLWKKFRG-EDKPPAHLGSSEDYNVDMVPK 364 + +L+L + + + E +L ++D NVD +PK Sbjct: 559 QAAALDLGLIQQSAKALESAKFVYLMGADDVNVDKIPK 596
>CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 583 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +2 Query: 149 VIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN 277 VI++G G + L+ +G+KV +++N++ GG + +N N Sbjct: 7 VIIIGAGAGGTATAARLAREGIKVTVVEKNNFGGGRCSLINHN 49
>GLPO_LACLA (Q9CG65) Alpha-glycerophosphate oxidase (EC 1.1.3.21)| (Glycerol-3-phosphate oxidase) Length = 609 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +2 Query: 107 RQARCAAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST 262 RQ +EE D++V+G G+ L+ + G+KV ++ D+ G S+ Sbjct: 8 RQEAITKIQNEEMDLLVIGGGITGAGLTLQAAAAGMKVAVLEMQDFSEGTSS 59
>DLDH_MOUSE (O08749) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) Length = 509 Score = 28.9 bits (63), Expect = 5.9 Identities = 22/93 (23%), Positives = 39/93 (41%) Frame = +2 Query: 65 HFSXXXXXXXXXXXRQARCAAAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 244 HF+ R A E DV V+G+G C+ + + G K + +++N+ Sbjct: 16 HFNRISHGLQGVSSVPLRTYADQPIEADVTVIGSGPGGCVAAIKSAQLGFKTVCIEKNET 75 Query: 245 YGGDSTSLNLNQLWKKFRGEDKPPAHLGSSEDY 343 GG T LN+ + K + H+ +D+ Sbjct: 76 LGG--TCLNVGCIPSKALLNNSHYYHMAHGKDF 106
>THIJ_ECOLI (Q46948) Protein thiJ| Length = 196 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +2 Query: 134 DEEYDVIVLGTGLK--ECILSGLLSVDGLKVLH 226 D EYDVIVL G+K EC L V+ +K H Sbjct: 64 DGEYDVIVLPGGIKGAECFRDSTLLVETVKQFH 96
>MDL1_PRUDU (O24243) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 559 Score = 28.5 bits (62), Expect = 7.7 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 7/100 (7%) Frame = +2 Query: 128 AMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-------DYYGGDSTSLNLNQLW 286 +++ YD IV+G G C L+ LS + KVL ++R + D + NL Q Sbjct: 49 SLEGSYDYIVIGGGTSGCPLAATLS-EKYKVLLLERGTIATEYPNTLTADGFAYNLQQ-- 105 Query: 287 KKFRGEDKPPAHLGSSEDYNVDMVPKFMMANGTLVRTLIH 406 + + K P SED +D V ++ T++ ++ Sbjct: 106 ---QDDGKTPVERFVSED-GIDNVRARILGGTTIINAGVY 141
>GLF8_KLEPN (Q48481) Probable UDP-galactopyranose mutase (EC 5.4.99.9)| Length = 384 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = +2 Query: 146 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 259 +++++G G +++ L+ G V +DR D+ GG+S Sbjct: 5 NIMIVGAGFSGVVIARQLAEQGYTVKIIDRRDHIGGNS 42
>VG65_ICHV1 (Q00106) Hypothetical gene 65 protein| Length = 1434 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 143 YDVIV--LGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTS 265 +D+++ LG GL +SGL G+ + +N Y+G DS S Sbjct: 261 HDIVIVGLGIGLPPRAVSGLEEKMGIDLFWKTQNSYHGRDSVS 303
>ASSY_STRAW (Q827Z1) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 404 Score = 28.5 bits (62), Expect = 7.7 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = +1 Query: 322 SRLKRRLQRRHGSKVYDGKW 381 +R KR++++R G VYDG+W Sbjct: 303 ARYKRQVEQRWGELVYDGQW 322
>OOXA1_RHIME (Q92XP4) Opine oxidase subunit A (EC 1.-.-.-) (Octopine oxidase| subunit A) Length = 458 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +2 Query: 143 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWK 289 +D IV+G G SGLL+ +G KVL +D GG Q+W+ Sbjct: 4 WDAIVIGAGPAGIGASGLLAENGAKVLVIDEAPGPGG--------QIWR 44
>CHIA_MOUSE (Q91XA9) Acidic mammalian chitinase precursor (EC 3.2.1.14)| (AMCase) (YNL) Length = 473 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 269 NLNQLWKKFRGEDKP----PAHLGSSEDYNVDMVPKFMMANGTLVRTLI 403 +L+ W+ + GE+ P P GS+ NVD V + NG LI Sbjct: 213 DLHGSWEGYTGENSPLYKYPTETGSNAYLNVDYVMNYWKNNGAPAEKLI 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,020,058 Number of Sequences: 219361 Number of extensions: 1006645 Number of successful extensions: 3203 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 3109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3183 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)