ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60c11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109368.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D03, full insert sequence Length = 1826 Score = 226 bits (114), Expect = 3e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 276 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 335 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 336 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 395 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 396 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 455 Query: 223 cccagccgcaggactactggcc 244 ||||| ||||||| ||||||| Sbjct: 456 cccagatgcaggacaactggcc 477
>dbj|AK073310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F01, full insert sequence Length = 2721 Score = 226 bits (114), Expect = 3e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 1171 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 1230 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 1231 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 1290 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 1291 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 1350 Query: 223 cccagccgcaggactactggcc 244 ||||| ||||||| ||||||| Sbjct: 1351 cccagatgcaggacaactggcc 1372
>dbj|AK069916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C16, full insert sequence Length = 2118 Score = 226 bits (114), Expect = 3e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 288 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 347 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 348 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 407 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 408 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 467 Query: 223 cccagccgcaggactactggcc 244 ||||| ||||||| ||||||| Sbjct: 468 cccagatgcaggacaactggcc 489
>dbj|AK064238.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A09, full insert sequence Length = 1443 Score = 226 bits (114), Expect = 3e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 180 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 239 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 240 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 299 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 300 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 359 Query: 223 cccagccgcaggactactggcc 244 ||||| ||||||| ||||||| Sbjct: 360 cccagatgcaggacaactggcc 381
>dbj|AK061376.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G07, full insert sequence Length = 1828 Score = 226 bits (114), Expect = 3e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 276 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 335 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 336 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 395 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 396 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 455 Query: 223 cccagccgcaggactactggcc 244 ||||| ||||||| ||||||| Sbjct: 456 cccagatgcaggacaactggcc 477
>dbj|AK061171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-B06, full insert sequence Length = 1551 Score = 226 bits (114), Expect = 3e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 257 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 316 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 317 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 376 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 377 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 436 Query: 223 cccagccgcaggactactggcc 244 ||||| ||||||| ||||||| Sbjct: 437 cccagatgcaggacaactggcc 458
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 216 bits (109), Expect = 3e-53 Identities = 166/185 (89%) Strand = Plus / Minus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 19225427 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 19225368 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 19225367 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 19225308 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 19225307 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 19225248 Query: 223 cccag 227 ||||| Sbjct: 19225247 cccag 19225243 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 19205337 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 19205278 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 19205277 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 19205238 Score = 46.1 bits (23), Expect = 0.063 Identities = 32/35 (91%) Strand = Plus / Minus Query: 93 ggacggctgccgcagcacacgtacctcgactactc 127 ||||||||||| |||||||| ||||| |||||||| Sbjct: 19246989 ggacggctgcctcagcacacatacctggactactc 19246955
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 216 bits (109), Expect = 3e-53 Identities = 166/185 (89%) Strand = Plus / Minus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 19151654 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 19151595 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 19151594 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 19151535 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 19151534 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 19151475 Query: 223 cccag 227 ||||| Sbjct: 19151474 cccag 19151470 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 19131564 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 19131505 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 19131504 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 19131465 Score = 46.1 bits (23), Expect = 0.063 Identities = 32/35 (91%) Strand = Plus / Minus Query: 93 ggacggctgccgcagcacacgtacctcgactactc 127 ||||||||||| |||||||| ||||| |||||||| Sbjct: 19173216 ggacggctgcctcagcacacatacctggactactc 19173182
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 216 bits (109), Expect = 3e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 518 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 577 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 578 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 637 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 638 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 697 Query: 223 cccag 227 ||||| Sbjct: 698 cccag 702 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 20644 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 20703 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 20704 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 20743
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 216 bits (109), Expect = 3e-53 Identities = 166/185 (89%) Strand = Plus / Minus Query: 43 tggtgctcctcggcacctggccggtcgtcctcgccgtgctggagcgccggggacggctgc 102 |||||||||| ||||| |||||||| ||||||||||||||||||||||| || || || | Sbjct: 58757 tggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcc 58698 Query: 103 cgcagcacacgtacctcgactactccatcaccaacttcctggccgccgtgctgatcgccc 162 |||||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| Sbjct: 58697 cgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgcct 58638 Query: 163 tcacattcggccagatcggcggcgacacgccggagacgcccaatttcctcactcagctca 222 |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 58637 tcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctca 58578 Query: 223 cccag 227 ||||| Sbjct: 58577 cccag 58573 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 38667 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 38608 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 38607 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 38568 Score = 46.1 bits (23), Expect = 0.063 Identities = 32/35 (91%) Strand = Plus / Minus Query: 93 ggacggctgccgcagcacacgtacctcgactactc 127 ||||||||||| |||||||| ||||| |||||||| Sbjct: 80319 ggacggctgcctcagcacacatacctggactactc 80285
>dbj|AK106219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H06, full insert sequence Length = 1626 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 180 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 239 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 240 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 279
>dbj|AK073792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068M22, full insert sequence Length = 1745 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 181 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 240 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 241 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 280
>dbj|AK072750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134K21, full insert sequence Length = 2066 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 557 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 616 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 617 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 656
>dbj|AK058620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B07, full insert sequence Length = 1587 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 84 gagcgccggggacggctgccgcagcacacgtacctcgactactccatcaccaacttcctg 143 |||||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 139 gagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctc 198 Query: 144 gccgccgtgctgatcgccctcacattcggccagatcggcg 183 || || || || ||||| ||||| ||||| ||| |||||| Sbjct: 199 gctgcggtcctcatcgcgctcaccttcggtcagctcggcg 238
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 259 cgctggcgggcggcgtggtgatc 281 ||||||||||||||||||||||| Sbjct: 1695353 cgctggcgggcggcgtggtgatc 1695375
>gb|BT018631.1| Zea mays clone EL01N0503E08.d mRNA sequence Length = 2126 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tcgccgtgctggagcgccgggg 94 |||||||||||||||||||||| Sbjct: 276 tcgccgtgctggagcgccgggg 297
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cgccgtgctgatcgccctcac 166 ||||||||||||||||||||| Sbjct: 294480 cgccgtgctgatcgccctcac 294500
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 ggagccatcgggctgatggcggcg 38 ||||||||||| |||||||||||| Sbjct: 745995 ggagccatcggcctgatggcggcg 746018
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcgctggcgggcggcgtggt 277 |||||||||||||||||||| Sbjct: 609345 gcgctggcgggcggcgtggt 609326 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcgctggcgggcggcgtggt 277 |||||||||||||||||||| Sbjct: 401679 gcgctggcgggcggcgtggt 401660
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 tcctcgccgtgctggagcgccggg 93 ||||||||| |||||||||||||| Sbjct: 1679927 tcctcgccgagctggagcgccggg 1679950
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcgctggcgggcggcgtggt 277 |||||||||||||||||||| Sbjct: 266071 gcgctggcgggcggcgtggt 266052 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcgctggcgggcggcgtggt 277 |||||||||||||||||||| Sbjct: 59712 gcgctggcgggcggcgtggt 59693
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcgctggcgggcggcgtggt 277 |||||||||||||||||||| Sbjct: 266129 gcgctggcgggcggcgtggt 266110 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcgctggcgggcggcgtggt 277 |||||||||||||||||||| Sbjct: 59649 gcgctggcgggcggcgtggt 59630
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 gcgccggggacggctgccgcagca 109 |||||||||||||| ||||||||| Sbjct: 112803 gcgccggggacggcggccgcagca 112780
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cattcggccagatcggcggc 185 |||||||||||||||||||| Sbjct: 1871714 cattcggccagatcggcggc 1871733
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gggaggacatcggcggagcc 20 |||||||||||||||||||| Sbjct: 4641833 gggaggacatcggcggagcc 4641814
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atcggcggcgacacgccgga 196 |||||||||||||||||||| Sbjct: 1513899 atcggcggcgacacgccgga 1513880
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ccgccgtgctgatcgccctc 164 |||||||||||||||||||| Sbjct: 393311 ccgccgtgctgatcgccctc 393292
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgtcctcgccgtgctggagc 87 |||||||||||||||||||| Sbjct: 39973 cgtcctcgccgtgctggagc 39992 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,787,326 Number of Sequences: 3902068 Number of extensions: 1787326 Number of successful extensions: 42721 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41486 Number of HSP's gapped (non-prelim): 1235 length of query: 297 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 275 effective length of database: 17,147,199,772 effective search space: 4715479937300 effective search space used: 4715479937300 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
