ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60c09 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 167 bits (424), Expect = 4e-42 Identities = 86/108 (79%), Positives = 86/108 (79%) Frame = +2 Query: 47 MAPLPPWRGAGLLPLLSDVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDSGMY 226 MAPL R A LL LLS GGKTGQVTVFWGRNKAEGSLREACDSGMY Sbjct: 1 MAPLAARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMY 60 Query: 227 TMVTMSFLDVFGANGKYHLHLSGHDLSSVGADIKHCQFKGVPVSLSIG 370 TMVTMSFLDVFGANGKYHL LSGHDLSSVGADIKHCQ KGVPVSLSIG Sbjct: 61 TMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIG 108
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 107 bits (266), Expect = 9e-24 Identities = 54/101 (53%), Positives = 67/101 (66%) Frame = +2 Query: 68 RGAGLLPLLSDVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSF 247 R + L+PL + GKTGQ+TVFWGRNK EG+L+E CD+G+YT V +SF Sbjct: 6 RRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISF 65 Query: 248 LDVFGANGKYHLHLSGHDLSSVGADIKHCQFKGVPVSLSIG 370 VFG +G+Y LSGHDL +GADIKHCQ K + V LSIG Sbjct: 66 YSVFG-HGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIG 105
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 94.4 bits (233), Expect = 6e-20 Identities = 43/71 (60%), Positives = 57/71 (80%) Frame = +2 Query: 158 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGHDLSSVGADIKHCQ 337 + V+WGR+K EGSLREACD+G YT V ++F + FG +G+Y L +SGH L++VGADIKHCQ Sbjct: 32 LAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFG-HGRYSLDISGHPLAAVGADIKHCQ 90 Query: 338 FKGVPVSLSIG 370 +G+ V LSIG Sbjct: 91 SRGITVLLSIG 101
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 64.3 bits (155), Expect = 7e-11 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 6/81 (7%) Frame = +2 Query: 146 KTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGHDLSSVGA-- 319 K G + V+WG++ EG L + C+SG+Y +V ++FL FG L+L+GH S G Sbjct: 23 KAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQ 82 Query: 320 ----DIKHCQFKGVPVSLSIG 370 I+HCQ G+ + LSIG Sbjct: 83 QLTKSIRHCQSIGIKIMLSIG 103
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 64.3 bits (155), Expect = 7e-11 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 5/77 (6%) Frame = +2 Query: 155 QVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGH-----DLSSVGA 319 Q+ ++WG+N EGSL + C+SG Y V ++F+ FG L+L+GH + +S+ + Sbjct: 27 QIVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPATNCNSLSS 86 Query: 320 DIKHCQFKGVPVSLSIG 370 DIK CQ G+ V LSIG Sbjct: 87 DIKTCQQAGIKVLLSIG 103
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 63.2 bits (152), Expect = 2e-10 Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 6/79 (7%) Frame = +2 Query: 152 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGH------DLSSV 313 G + ++WG+N EG+L + C++G Y+ V ++FL+ FG ++L+GH +SV Sbjct: 26 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSV 85 Query: 314 GADIKHCQFKGVPVSLSIG 370 I++CQ +G+ V LSIG Sbjct: 86 STGIRNCQNRGIKVMLSIG 104
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 61.6 bits (148), Expect = 4e-10 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 6/79 (7%) Frame = +2 Query: 152 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGHDLSSV------ 313 G ++V+WG+N EGSL +AC++G Y V ++FL FG L+L+GH S+ Sbjct: 30 GGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVF 89 Query: 314 GADIKHCQFKGVPVSLSIG 370 IK CQ K + V LS+G Sbjct: 90 SDQIKECQSKDIKVLLSLG 108
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 61.6 bits (148), Expect = 4e-10 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 6/81 (7%) Frame = +2 Query: 146 KTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGHDLSSVGA-- 319 + G + ++WG+N EGSL + C + Y +V ++FL VFG L+L+GH + GA Sbjct: 21 EAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACT 80 Query: 320 ----DIKHCQFKGVPVSLSIG 370 DI+ CQ +G+ V LS+G Sbjct: 81 GLSNDIRACQNQGIKVMLSLG 101
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 60.5 bits (145), Expect = 1e-09 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%) Frame = +2 Query: 158 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGH-DLSSVGA----- 319 + V+WG+N EGSL++AC++ Y V ++FL FG ++L+GH D S+ G Sbjct: 26 IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSP 85 Query: 320 DIKHCQFKGVPVSLSIG 370 +I+ CQ KG+ V LS+G Sbjct: 86 EIQACQAKGIKVLLSLG 102
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 58.5 bits (140), Expect = 4e-09 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%) Frame = +2 Query: 152 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGH------DLSSV 313 G + ++WG+N EG+L C +G Y V ++FL FG L+L+GH + Sbjct: 30 GGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHF 89 Query: 314 GADIKHCQFKGVPVSLSIG 370 G+ +K CQ +G+ V LS+G Sbjct: 90 GSQVKDCQSRGIKVMLSLG 108
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 6/79 (7%) Frame = +2 Query: 152 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGHDLSSVGA---- 319 G + ++WG+N EG+L + C + Y+ V ++FL+ FG ++L+GH + G Sbjct: 27 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 86 Query: 320 --DIKHCQFKGVPVSLSIG 370 I+ CQ +G+ V LS+G Sbjct: 87 SNGIRSCQIQGIKVMLSLG 105
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 55.1 bits (131), Expect = 4e-08 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 17/88 (19%) Frame = +2 Query: 158 VTVFWGRNKAEGSLREA-----CDSGMYTMVTMSFLDVFGANGKYHLHLSGH-------- 298 V +WG+N A GS +A C+SG V +SFL VF G ++LS Sbjct: 31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPN 90 Query: 299 ----DLSSVGADIKHCQFKGVPVSLSIG 370 +VGADIK CQ KGV V LS+G Sbjct: 91 TQLLSCPAVGADIKKCQDKGVKVILSLG 118
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 54.3 bits (129), Expect = 7e-08 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 17/88 (19%) Frame = +2 Query: 158 VTVFWGRNKAEGSLREA-----CDSGMYTMVTMSFLDVFGANGKYHLHLSGH-------- 298 V +WG+N A GS +A C+SG V +SFL VF G ++LS Sbjct: 31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPN 90 Query: 299 ----DLSSVGADIKHCQFKGVPVSLSIG 370 +VGADIK CQ KGV V LS+G Sbjct: 91 TQLLSCPAVGADIKKCQDKGVKVILSLG 118
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 52.0 bits (123), Expect = 4e-07 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Frame = +2 Query: 158 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGH------DLSSVGA 319 + ++WG+N EGSL C +G Y V ++FL FG+ L+L+GH + + Sbjct: 28 IAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSD 87 Query: 320 DIKHCQFKGVPVSLSIG 370 +I C+ + V V LSIG Sbjct: 88 EINSCKSQNVKVLLSIG 104
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 8/80 (10%) Frame = +2 Query: 155 QVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAN-GKYHLHLSGHDLSSVG----- 316 ++ V+WG+ + +G LR+ C + Y +V +SFLD FG K L L G SVG Sbjct: 31 EIAVYWGQRE-DGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSF 89 Query: 317 --ADIKHCQFKGVPVSLSIG 370 + IK CQ GV V L++G Sbjct: 90 LESQIKECQRMGVKVFLALG 109
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 48.1 bits (113), Expect = 5e-06 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 17/88 (19%) Frame = +2 Query: 158 VTVFWGRNKA-----EGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGH-------- 298 V +WG+N A +GSL C SG ++ +SFL+ F G ++L+ Sbjct: 29 VMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFFPN 88 Query: 299 ----DLSSVGADIKHCQFKGVPVSLSIG 370 +VG+DIK CQ GV V LS+G Sbjct: 89 TNLLHCPTVGSDIKTCQSNGVKVLLSLG 116
>CHLY_PARTH (P23473) Bifunctional chitinase/lysozyme [Includes: Chitinase (EC| 3.2.1.14); Lysozyme (EC 3.2.1.17)] (Fragment) Length = 47 Score = 43.5 bits (101), Expect = 1e-04 Identities = 17/41 (41%), Positives = 30/41 (73%) Frame = +2 Query: 152 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGK 274 G + ++WG+N EG+L + C++G Y+ V ++FL+ FG NG+ Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFG-NGQ 40
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 41.6 bits (96), Expect = 5e-04 Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 10/84 (11%) Frame = +2 Query: 149 TGQVTVFWGRNKAEGSLREA--CDSGMYTMVTMSFLDVFG-------ANGKYHLHLSGH- 298 + QV ++WG+N A G R A C +V +SFL++F AN + SG Sbjct: 22 SNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLNVNFANQCGNTFESGLL 81 Query: 299 DLSSVGADIKHCQFKGVPVSLSIG 370 S +GADIK CQ G V LS+G Sbjct: 82 HCSQIGADIKTCQSLGKTVLLSLG 105
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 11/82 (13%) Frame = +2 Query: 158 VTVFWGRNKA--EGSLREACDSGMYTMVTMSFLDVFG---------ANGKYHLHLSGHDL 304 + +WG+N + +L + C S +++ +SFLD F +G + L+ Sbjct: 20 IAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPNLSLNFANQCSGTFSSGLA--HC 77 Query: 305 SSVGADIKHCQFKGVPVSLSIG 370 S +G+DIK CQ +G + LS+G Sbjct: 78 SQIGSDIKSCQQQGKTILLSLG 99
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 36.6 bits (83), Expect = 0.015 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 11/82 (13%) Frame = +2 Query: 158 VTVFWGRNKAEGSLREA--CDSGMYTMVTMSFLDVFG-------ANGKYHLHLSGHDLS- 307 V V+WG+N R + CDS +V +SF+ F AN + + L Sbjct: 25 VAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFMHQFPSPIQLNFANACEGTYTANGILQC 84 Query: 308 -SVGADIKHCQFKGVPVSLSIG 370 ++ DIK+CQ KG + LS+G Sbjct: 85 QTIAEDIKYCQNKGKTILLSLG 106
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 34.7 bits (78), Expect = 0.058 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 9/80 (11%) Frame = +2 Query: 158 VTVFWGRNKA--EGSLREACDSGMYTMVTMSFLDVFGANGKYHLHLSGHDLSS------- 310 + V+WG+N A + SL C+S + +SFL+ F G + S Sbjct: 29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFPTLGLNFANACSDTFSDGLLHCTQ 88 Query: 311 VGADIKHCQFKGVPVSLSIG 370 + DI+ CQ G V LS+G Sbjct: 89 IAEDIETCQSLGKKVLLSLG 108
>RL4_CHLTR (O84532) 50S ribosomal protein L4| Length = 222 Score = 32.3 bits (72), Expect = 0.29 Identities = 27/89 (30%), Positives = 39/89 (43%) Frame = -1 Query: 306 DRSWPERWRWYLPLAPKTSRKDMVTMVYMPESQASRRDPSALFRPQNTVTWPVFPPAAKA 127 D S E ++ LP A T K+ Y+ QA++R SA R ++ V+ P Sbjct: 8 DFSGKESGKFELPDAFFTEGKEQSVKDYLVAIQANKRQWSACTRGRSEVSHSTKKP---- 63 Query: 126 GGVRNKAATSERRGRRPAPLQGGSGAIFG 40 R K + R+G AP G G +FG Sbjct: 64 --FRQKGTGNARQGCLAAPQFRGGGIVFG 90
>RCEL_CHRVI (P51762) Reaction center protein L chain (Photosynthetic reaction| center L subunit) Length = 278 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 327 LMSAPTEDRSWPERWRWYLPL 265 ++S P R WPE W W+L L Sbjct: 255 VISGPFWTRGWPEWWNWWLEL 275
>VID21_CRYNE (Q5KL22) Chromatin modification-related protein VID21| Length = 985 Score = 28.9 bits (63), Expect = 3.2 Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 13/118 (11%) Frame = -1 Query: 345 PLNWQCLMSA--------PTEDRSWPERW-RWYLPLAP-KTSRKDMVTMVYMPESQASRR 196 P NW + + P E R+ E W RWY K + P + AS Sbjct: 436 PFNWDLIADSFNTEMILIPVEKRNPYECWERWYYTFGEGKNKPRQDAPPSAPPPAPASAT 495 Query: 195 DP---SALFRPQNTVTWPVFPPAAKAGGVRNKAATSERRGRRPAPLQGGSGAIFGLST 31 P +A PQ+ VT P PP+A N + S R P Q G ++ L T Sbjct: 496 QPGTATATPVPQSAVTTPGVPPSA------NLPSASGR------PQQTGGNSVSSLPT 541
>RL4_CHLMU (Q9PJL5) 50S ribosomal protein L4| Length = 222 Score = 28.9 bits (63), Expect = 3.2 Identities = 26/89 (29%), Positives = 37/89 (41%) Frame = -1 Query: 306 DRSWPERWRWYLPLAPKTSRKDMVTMVYMPESQASRRDPSALFRPQNTVTWPVFPPAAKA 127 D S E + LP A K+ Y+ QA++R SA R ++ V+ P Sbjct: 8 DFSGKESGKVELPDAFFAEGKEQSVKDYLVAIQANKRQWSACTRGRSEVSHSTRKP---- 63 Query: 126 GGVRNKAATSERRGRRPAPLQGGSGAIFG 40 R K + R+G AP G G +FG Sbjct: 64 --FRQKGTGNARQGCLAAPQFRGGGIVFG 90
>KCTD2_MOUSE (Q8CEZ0) Potassium channel tetramerisation domain-containing| protein 2 Length = 266 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 4/84 (4%) Frame = -1 Query: 297 WPERWRWYLPLAPKTSRKDMVTMVYMPESQASRRDPSALF----RPQNTVTWPVFPPAAK 130 W +WR + + V V + A DP AL P +T P PP Sbjct: 6 WTRQWRGW----------EGVAAVRWATAAARAADPPALALRGRHPADTAASPP-PPRTA 54 Query: 129 AGGVRNKAATSERRGRRPAPLQGG 58 R A RRGR P Q G Sbjct: 55 GARARTSGADGRRRGRPLGPAQRG 78
>TGT_THET8 (Q5SLI7) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 385 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 225 YMPESQASRRDPSALFRPQNTVTWPVFPPAAKAGGVR 115 + E++A R LF P V P+F P AG V+ Sbjct: 6 FQVEARAGRARVGRLFTPHGAVETPLFMPVGTAGSVK 42
>TGT_THET2 (Q72H19) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 385 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 225 YMPESQASRRDPSALFRPQNTVTWPVFPPAAKAGGVR 115 + E++A R LF P V P+F P AG V+ Sbjct: 6 FQVEARAGRARVGRLFTPHGAVETPLFMPVGTAGSVK 42
>RCEL_RHOPH (P51750) Reaction center protein L chain (Photosynthetic reaction| center L subunit) (Fragment) Length = 255 Score = 28.5 bits (62), Expect = 4.2 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -1 Query: 327 LMSAPTEDRSWPERWRWYL 271 ++S P R WPE W W+L Sbjct: 229 ILSGPFWTRGWPEWWNWWL 247
>RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 981 Score = 28.5 bits (62), Expect = 4.2 Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Frame = -1 Query: 315 PTEDRSWPERWRWYLPLAPKTSRKDMVTMVYMPESQASRRD--PSALFRPQNTVTWPVFP 142 PT DRS P R R LP +R + E A+ RD P P +V+ V P Sbjct: 896 PTGDRSAPRRARTALPGVDGHTRCTRRSDRGPGERDANVRDKRPRRSMPPSRSVS-SVPP 954 Query: 141 PAAKAGGV---RNKAATSERRGRR 79 P++ GG R + A RR RR Sbjct: 955 PSSSGGGADGDRVEGAARPRRQRR 978
>CRYD_RHOBA (Q7UJB1) Cryptochrome DASH| Length = 488 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/21 (61%), Positives = 13/21 (61%) Frame = +1 Query: 49 GAAPTLEGSGPPTPPLRRRCL 111 G PTLE G TPPL RCL Sbjct: 186 GDIPTLESLGLSTPPLDDRCL 206
>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) Length = 524 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -1 Query: 270 PLAPKTSRKDMVTMVYMPESQASRRDP-----SALFRPQNTVTWPVFPPAAKAGGVRNKA 106 P+ PKTS T+ ++ R P S +FR + + P PA GG+R + Sbjct: 48 PVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFS 107 Query: 105 ATSERRGRRPAP 70 + + G +P Sbjct: 108 RSRKTSGLSSSP 119
>GLI1_XENLA (Q91690) Zinc finger protein GLI1 (GLI-1) (Fragment)| Length = 1360 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = +2 Query: 278 HLHLSGHDLSSVG--ADIKHCQFKGVPVSLS 364 H HLS +S + + +KHCQ K P+S++ Sbjct: 165 HEHLSSRGMSMLQPRSSVKHCQLKSEPLSIT 195
>RCEL_RHOGE (P51760) Reaction center protein L chain (Photosynthetic reaction| center L subunit) Length = 278 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 327 LMSAPTEDRSWPERWRWYLPL 265 ++S P R WPE W W+L L Sbjct: 249 VISGPFWTRGWPEWWGWWLNL 269
>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) (H91620p) Length = 569 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -1 Query: 270 PLAPKTSRKDMVTMVYMPESQASRRDP-----SALFRPQNTVTWPVFPPAAKAGGVRNKA 106 P+ PKTS T+ ++ R P S +FR + + P PA GG+R + Sbjct: 92 PVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFS 151 Query: 105 ATSERRGRRPAP 70 + + G +P Sbjct: 152 RSRKTSGLSSSP 163
>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -1 Query: 141 PAAKAGGVRNKAATSERRGRRPAPLQGGSGAIFGLS 34 PAA+ R++AA + R PAP G S +FG+S Sbjct: 92 PAARRAAARSRAAAAGGMRRDPAP--GSSMLLFGVS 125
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Frame = -1 Query: 210 QASRRDPSALFRPQNTVTWPVFPPAAKAGGVRNKAATSERRGRRPA-------PLQGGSG 52 Q+S +D SA P + +PV P A + A G +PA P GSG Sbjct: 2193 QSSSKDRSAASTPSKALKFPVHPRKAVGSLAPGELARGTENGMKPATPKAKPGPSSQGSG 2252 Query: 51 A 49 + Sbjct: 2253 S 2253
>ATPO_ARATH (Q96251) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 238 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 194 SLREACDSGMYTMVTMSFLDVFGANGK 274 ++R+ACD + T +FL + NGK Sbjct: 111 AIRDACDQAKFAEPTKNFLSLLAENGK 137
>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 766 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Frame = +3 Query: 12 RPKLLATWTNQKWRRSH-PGGERA 80 RP L TW N +W+ + PG E A Sbjct: 577 RPSPLPTWANHRWQHAQVPGSEHA 600 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,193,100 Number of Sequences: 219361 Number of extensions: 747955 Number of successful extensions: 3214 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3193 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
