ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60c09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene) Length = 915 Score = 414 bits (209), Expect = e-113 Identities = 295/326 (90%) Strand = Plus / Plus Query: 47 atggcgccgctcccaccctggaggggagcgggcctcctacccctcctctccgacgtcgct 106 |||||||||||| || || ||||| ||| ||||||| |||||||||||| || ||| Sbjct: 1 atggcgccgctcgcagcccggaggccagcctgcctcctggccctcctctccgtcgccgcg 60 Query: 107 gccttattcctaaccccgccggccttggcggcnnnnnnnaagaccggccaggtgacggtg 166 ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 61 gccttattcctgaccccgacggccttggcggcggggggaaagaccggccaggtgacggtg 120 Query: 167 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 226 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 121 ttctggggacggaacaaggccgagggctccctgcgtgaggcctgcgactccggtatgtac 180 Query: 227 accatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctccac 286 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 181 accatggtcaccatgtccttgctcgacgtcttcggcgccaacggcaagtaccacctcgac 240 Query: 287 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 346 ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 241 ctctccggccatgacctctcctccgtcggcgccgacatcaagcactgccagtccaagggc 300 Query: 347 gtccccgtctccctctccatcggcgg 372 ||||| |||||||||||||||||||| Sbjct: 301 gtccctgtctccctctccatcggcgg 326
>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III, complete cds Length = 934 Score = 355 bits (179), Expect = 6e-95 Identities = 209/219 (95%) Strand = Plus / Plus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 114 aagaccggccaggtgacggtgttctggggccggaacaaggccgaggggtccctgcgcgag 173 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgcc 265 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 174 gcctgcgactccggcatgtacaccatggtcaccatgtctttcctcgacgtctttggcgcc 233 Query: 266 aacggcaagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatc 325 || || |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 234 aaaggaaagtaccacctcgacctctccggccacgacctctccgccgtcggcgccgacatc 293 Query: 326 aagcactgccagttcaagggcgtccccgtctccctctcc 364 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 294 aagcactgccagtccaagggcgtccccgtctccctctcc 332 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 38 aaaccaaaaatggcgccgctcccaccctggagg 70 ||||||| ||||||||||||| ||||| ||||| Sbjct: 6 aaaccaacaatggcgccgctcgcacccgggagg 38
>ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 133 bits (67), Expect = 4e-28 Identities = 183/221 (82%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 115 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 174 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 175 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 234 Query: 272 aagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||| ||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 235 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 294 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcgg 372 |||||| ||||||||||| |||||||||| |||||||||| Sbjct: 295 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg 335
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 133 bits (67), Expect = 4e-28 Identities = 183/221 (82%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 26161676 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 26161735 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 26161736 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 26161795 Query: 272 aagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||| ||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 26161796 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 26161855 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcgg 372 |||||| ||||||||||| |||||||||| |||||||||| Sbjct: 26161856 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg 26161896 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 454150 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 454091 Query: 369 gcgg 372 |||| Sbjct: 454090 gcgg 454087 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 ||||||||||||||||||||||| |||| Sbjct: 7138586 cgtcggcgccgacatcaagcactaccag 7138559 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 324 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcgg 372 ||||| |||||| || ||||||||||| |||| |||||| |||||||| Sbjct: 13416986 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcgg 13417034
>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full insert sequence Length = 1165 Score = 133 bits (67), Expect = 4e-28 Identities = 183/221 (82%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 163 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 222 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 223 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 282 Query: 272 aagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||| ||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 283 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 342 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcgg 372 |||||| ||||||||||| |||||||||| |||||||||| Sbjct: 343 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg 383
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 133 bits (67), Expect = 4e-28 Identities = 183/221 (82%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 53534 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 53593 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 53594 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 53653 Query: 272 aagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||| ||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 53654 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 53713 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcgg 372 |||||| ||||||||||| |||||||||| |||||||||| Sbjct: 53714 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg 53754
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 125 bits (63), Expect = 1e-25 Identities = 173/209 (82%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 60784 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 60843 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 60844 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 60900 Query: 284 cacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 ||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 60901 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 60960 Query: 344 ggcgtccccgtctccctctccatcggcgg 372 | ||||||| ||||||||||||||| Sbjct: 60961 tacatccccgtgctcctctccatcggcgg 60989 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 75794 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 75853 Query: 369 gcgg 372 |||| Sbjct: 75854 gcgg 75857 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 67353 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 67412 Query: 369 gcgg 372 |||| Sbjct: 67413 gcgg 67416 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 81641 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 81700 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 81701 acatcttcgtcttcctctccatcggcgg 81728 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 |||||||||||||||| | ||| |||||||||||| ||||||||||||||| |||| Sbjct: 87192 acctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaaga 87133 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | |||||||| ||||||| ||||||| Sbjct: 87132 acatccccgtcctcctctccgtcggcgg 87105 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| |||||| |||| Sbjct: 57891 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctcaatcg 57950 Query: 369 gcgg 372 |||| Sbjct: 57951 gcgg 57954 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 84428 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 84369 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 84368 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 84324 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| ||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 63722 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 63781 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 63782 caagggcatcgtcgtgctcctctccatcggcgg 63814 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 51249 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 51190 Query: 345 gcgtc 349 ||||| Sbjct: 51189 gcgtc 51185 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 84267 cgtcggcgccgacatcaagcactgccag 84240 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 55951 acctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagg 55892 Query: 345 gcgtc 349 ||||| Sbjct: 55891 gcgtc 55887 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 88736 cgtcggcgccgacgtcaagcactgcca 88710
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 125 bits (63), Expect = 1e-25 Identities = 173/209 (82%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28101517 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28101576 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 28101577 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 28101633 Query: 284 cacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 ||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 28101634 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 28101693 Query: 344 ggcgtccccgtctccctctccatcggcgg 372 | ||||||| ||||||||||||||| Sbjct: 28101694 tacatccccgtgctcctctccatcggcgg 28101722 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28117239 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28117298 Query: 369 gcgg 372 |||| Sbjct: 28117299 gcgg 28117302 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28108798 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28108857 Query: 369 gcgg 372 |||| Sbjct: 28108858 gcgg 28108861 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 28123086 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 28123145 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 28123146 acatcttcgtcttcctctccatcggcgg 28123173 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 |||||||||||||||| | ||| |||||||||||| ||||||||||||||| |||| Sbjct: 28128637 acctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaaga 28128578 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | |||||||| ||||||| ||||||| Sbjct: 28128577 acatccccgtcctcctctccgtcggcgg 28128550 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| |||||| |||| Sbjct: 28098624 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctcaatcg 28098683 Query: 369 gcgg 372 |||| Sbjct: 28098684 gcgg 28098687 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28125873 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28125814 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28125813 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28125769 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| ||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 28105167 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28105226 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 28105227 caagggcatcgtcgtgctcctctccatcggcgg 28105259 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 28091982 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 28091923 Query: 345 gcgtc 349 ||||| Sbjct: 28091922 gcgtc 28091918 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 28125712 cgtcggcgccgacatcaagcactgccag 28125685 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/93 (81%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| |||||||||| |||||||| | ||||||| ||||||||||||||||||| Sbjct: 28104455 cctcgacctctccggncacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28104514 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 28104515 caagggcatcgtcgtgctcctctccatcggcgg 28104547 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 28096684 acctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagg 28096625 Query: 345 gcgtc 349 ||||| Sbjct: 28096624 gcgtc 28096620 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 28130181 cgtcggcgccgacgtcaagcactgcca 28130155
>dbj|AK073800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D20, full insert sequence Length = 1106 Score = 125 bits (63), Expect = 1e-25 Identities = 173/209 (82%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 193 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 252 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 253 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 309 Query: 284 cacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 ||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 310 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 369 Query: 344 ggcgtccccgtctccctctccatcggcgg 372 | ||||||| ||||||||||||||| Sbjct: 370 tacatccccgtgctcctctccatcggcgg 398
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 125 bits (63), Expect = 1e-25 Identities = 173/209 (82%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28086395 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28086454 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 28086455 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 28086511 Query: 284 cacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 ||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 28086512 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 28086571 Query: 344 ggcgtccccgtctccctctccatcggcgg 372 | ||||||| ||||||||||||||| Sbjct: 28086572 tacatccccgtgctcctctccatcggcgg 28086600 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28102117 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28102176 Query: 369 gcgg 372 |||| Sbjct: 28102177 gcgg 28102180 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28093676 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28093735 Query: 369 gcgg 372 |||| Sbjct: 28093736 gcgg 28093739 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 28107964 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 28108023 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 28108024 acatcttcgtcttcctctccatcggcgg 28108051 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 |||||||||||||||| | ||| |||||||||||| ||||||||||||||| |||| Sbjct: 28113515 acctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaaga 28113456 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | |||||||| ||||||| ||||||| Sbjct: 28113455 acatccccgtcctcctctccgtcggcgg 28113428 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| |||||| |||| Sbjct: 28083502 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctcaatcg 28083561 Query: 369 gcgg 372 |||| Sbjct: 28083562 gcgg 28083565 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28110751 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28110692 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28110691 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28110647 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| ||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 28090045 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28090104 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 28090105 caagggcatcgtcgtgctcctctccatcggcgg 28090137 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 28076860 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 28076801 Query: 345 gcgtc 349 ||||| Sbjct: 28076800 gcgtc 28076796 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 28110590 cgtcggcgccgacatcaagcactgccag 28110563 Score = 54.0 bits (27), Expect = 3e-04 Identities = 76/93 (81%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| |||||||||| |||||||| | ||||||| ||||||||||||||||||| Sbjct: 28089333 cctcgacctctccggscacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28089392 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 28089393 caagggcatcgtcgtgctcctctccatcggcgg 28089425 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 28081562 acctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagg 28081503 Query: 345 gcgtc 349 ||||| Sbjct: 28081502 gcgtc 28081498 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 28115059 cgtcggcgccgacgtcaagcactgcca 28115033
>dbj|D55708.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1049 Score = 125 bits (63), Expect = 1e-25 Identities = 173/209 (82%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 135 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 194 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 195 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 251 Query: 284 cacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 ||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 252 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 311 Query: 344 ggcgtccccgtctccctctccatcggcgg 372 | ||||||| ||||||||||||||| Sbjct: 312 tacatccccgtgctcctctccatcggcgg 340
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 14490753 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 14490694 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgt 255 |||||||||||||| | ||||||||||||| ||||||||||||| |||| Sbjct: 14490693 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgt 14490644 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 312 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggcg 371 |||||| ||||||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct: 14490590 tcggcgacgacatcaagcactgccagttcatcggcgtcccggtgtcgctctccatcggcg 14490531 Query: 372 g 372 | Sbjct: 14490530 g 14490530 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| ||| ||||||| Sbjct: 11388347 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctgtccatcg 11388406 Query: 369 gcgg 372 |||| Sbjct: 11388407 gcgg 11388410
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 83927 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 83868 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgt 255 |||||||||||||| | ||||||||||||| ||||||||||||| |||| Sbjct: 83867 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgt 83818 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 312 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggcg 371 |||||| ||||||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct: 83764 tcggcgacgacatcaagcactgccagttcatcggcgtcccggtgtcgctctccatcggcg 83705 Query: 372 g 372 | Sbjct: 83704 g 83704
>dbj|AK058882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B10, full insert sequence Length = 1019 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 290 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 349 Query: 369 gcgg 372 |||| Sbjct: 350 gcgg 353
>dbj|AB027426.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-g), partial cds, clone:C63579 Length = 383 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 245 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 304 Query: 369 gcgg 372 |||| Sbjct: 305 gcgg 308
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 163 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 222 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 59972 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 60031 Query: 223 gtacaccatggtcaccatgtccttcctc 250 |||| || |||| ||| ||||||||| Sbjct: 60032 ctacaacaccgtcatcatctccttcctc 60059 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 15063 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 15004 Query: 348 tccccgtctccctctccatcggcgg 372 ||| |||| |||| |||||||||| Sbjct: 15003 tcctcgtcctcctcgccatcggcgg 14979 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 15167 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 15108 Query: 247 cctc 250 |||| Sbjct: 15107 cctc 15104 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaaggg 345 ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 71257 tctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtccaaggg 71314 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 170 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 229 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 93520 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 93579 Query: 230 atggtcaccatgtccttcctc 250 | |||| ||| ||||||||| Sbjct: 93580 accgtcatcatttccttcctc 93600 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggc 346 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 93662 ccgtcggccccgacatcaagtactgccaatccaagggc 93699 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 220 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 71134 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 71186
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 163 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 222 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 8848047 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 8848106 Query: 223 gtacaccatggtcaccatgtccttcctc 250 |||| || |||| ||| ||||||||| Sbjct: 8848107 ctacaacaccgtcatcatctccttcctc 8848134 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 8803138 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 8803079 Query: 348 tccccgtctccctctccatcggcgg 372 ||| |||| |||| |||||||||| Sbjct: 8803078 tcctcgtcctcctcgccatcggcgg 8803054 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 8803242 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 8803183 Query: 247 cctc 250 |||| Sbjct: 8803182 cctc 8803179 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaaggg 345 ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 8859332 tctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtccaaggg 8859389 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 170 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 229 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 8881595 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 8881654 Query: 230 atggtcaccatgtccttcctc 250 | |||| ||| ||||||||| Sbjct: 8881655 accgtcatcatttccttcctc 8881675 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggc 346 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 8881737 ccgtcggccccgacatcaagtactgccaatccaagggc 8881774 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 220 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 8859209 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 8859261
>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full insert sequence Length = 1176 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 336 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 395 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 396 acatcttcgtcttcctctccatcggcgg 423
>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full insert sequence Length = 1234 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 337 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 396 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 397 acatcttcgtcttcctctccatcggcgg 424
>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1220 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 311 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 370 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 371 acatcttcgtcttcctctccatcggcgg 398
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C60571 Length = 1220 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 323 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 382 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 383 acatcttcgtcttcctctccatcggcgg 410
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C11701 Length = 1171 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 281 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 340 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 341 acatcttcgtcttcctctccatcggcgg 368
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C12269 Length = 1214 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 321 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 380 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 381 acatcttcgtcttcctctccatcggcgg 408
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C3540 Length = 1229 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 320 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 379 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 380 acatcttcgtcttcctctccatcggcgg 407
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds,clone:C10295 Length = 1199 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 302 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 361 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 362 acatcttcgtcttcctctccatcggcgg 389
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase homologue (OsChib3H-a)H-, complete cds, clone:C60129 Length = 1187 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 305 acctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaaga 364 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || ||||| ||||||||||||||| Sbjct: 365 acatcttcgtcttcctctccatcggcgg 392
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 135580 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 135521 Query: 348 tccccgtctccctctccatcggcgg 372 ||| |||| |||| |||||||||| Sbjct: 135520 tcctcgtcctcctcgccatcggcgg 135496 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 135684 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 135625 Query: 247 cctc 250 |||| Sbjct: 135624 cctc 135621
>dbj|AK065866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045O11, full insert sequence Length = 1198 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 288 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 347 Query: 348 tccccgtctccctctccatcggcgg 372 ||| |||| |||| |||||||||| Sbjct: 348 tcctcgtcctcctcgccatcggcgg 372 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 184 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 243 Query: 247 cctc 250 |||| Sbjct: 244 cctc 247
>dbj|AK062114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C02, full insert sequence Length = 1199 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 287 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 346 Query: 348 tccccgtctccctctccatcggcgg 372 ||| |||| |||| |||||||||| Sbjct: 347 tcctcgtcctcctcgccatcggcgg 371 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 183 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 242 Query: 247 cctc 250 |||| Sbjct: 243 cctc 246
>ref|XM_483351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 290 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 349 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 350 ccgtctacgtcctcctctccatcggcgg 377
>ref|XM_476387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 197 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 256 Query: 369 gcgg 372 |||| Sbjct: 257 gcgg 260
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 25755503 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 25755562 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 25755563 ccgtctacgtcctcctctccatcggcgg 25755590 Score = 56.0 bits (28), Expect = 8e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | |||||||||||| |||||||||||| | ||| Sbjct: 25771899 acctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaaac 25771840 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || |||||| ||||||||||||||| Sbjct: 25771839 acatctccgtcttcctctccatcggcgg 25771812 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 268 cggcaagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| ||||| || |||||||||| ||| | || |||||||||||||||||| Sbjct: 25752413 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 25752354 Query: 328 gcactgccag 337 ||||||||| Sbjct: 25752353 ccactgccag 25752344
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| ||| ||||||| Sbjct: 76056 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctgtccatcg 76115 Query: 369 gcgg 372 |||| Sbjct: 76116 gcgg 76119
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 27714 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 27773 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 27774 ccgtctacgtcctcctctccatcggcgg 27801 Score = 56.0 bits (28), Expect = 8e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | |||||||||||| |||||||||||| | ||| Sbjct: 44110 acctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaaac 44051 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | || |||||| ||||||||||||||| Sbjct: 44050 acatctccgtcttcctctccatcggcgg 44023 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 268 cggcaagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| ||||| || |||||||||| ||| | || |||||||||||||||||| Sbjct: 24624 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 24565 Query: 328 gcactgccag 337 ||||||||| Sbjct: 24564 ccactgccag 24555
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 56314 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 56255 Query: 369 gcgg 372 |||| Sbjct: 56254 gcgg 56251
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 133251 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 133310 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 133311 ccgtctacgtcctcctctccatcggcgg 133338 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 268 cggcaagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| ||||| || |||||||||| ||| | || |||||||||||||||||| Sbjct: 130161 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 130102 Query: 328 gcactgccag 337 ||||||||| Sbjct: 130101 ccactgccag 130092
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full insert sequence Length = 1008 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| |||||| |||| Sbjct: 226 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctcaatcg 285 Query: 369 gcgg 372 |||| Sbjct: 286 gcgg 289
>dbj|AK102505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E15, full insert sequence Length = 1166 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 |||||||||||||||| | ||| |||||||||||| ||||||||||||||| |||| Sbjct: 261 acctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaaga 320 Query: 345 gcgtccccgtctccctctccatcggcgg 372 | |||||||| ||||||| ||||||| Sbjct: 321 acatccccgtcctcctctccgtcggcgg 348
>dbj|AK073267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L23, full insert sequence Length = 1368 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 290 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 349 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 350 ccgtctacgtcctcctctccatcggcgg 377
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full insert sequence Length = 1150 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| |||||| |||| Sbjct: 273 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctcaatcg 332 Query: 369 gcgg 372 |||| Sbjct: 333 gcgg 336
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 8062 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 8003 Query: 369 gcgg 372 |||| Sbjct: 8002 gcgg 7999
>dbj|D55709.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 269 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 328 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 329 ccgtctacgtcctcctctccatcggcgg 356
>dbj|AB027427.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-h), partial cds, clone:S2321 Length = 500 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| || |||| || |||| |||||| |||| Sbjct: 300 ccgtcggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctcaatcg 359 Query: 369 gcgg 372 |||| Sbjct: 360 gcgg 363
>dbj|AB027425.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-d), complete cds, clone:C12856 Length = 1284 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||| Sbjct: 290 acctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaagg 349 Query: 345 gcgtccccgtctccctctccatcggcgg 372 |||| |||| ||||||||||||||| Sbjct: 350 ccgtctacgtcctcctctccatcggcgg 377
>dbj|AK122053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G24, full insert sequence Length = 2161 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 1143 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 1202 Query: 345 gcgtc 349 ||||| Sbjct: 1203 gcgtc 1207
>dbj|AK106678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A12, full insert sequence Length = 938 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 762 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 703 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 702 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 658 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 601 cgtcggcgccgacatcaagcactgccag 574
>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full insert sequence Length = 1076 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| ||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 289 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 348 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 349 caagggcatcgtcgtgctcctctccatcggcgg 381
>dbj|AK073757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O15, full insert sequence Length = 1281 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 263 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 322 Query: 345 gcgtc 349 ||||| Sbjct: 323 gcgtc 327
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full insert sequence Length = 1161 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 175 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 234 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 235 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 279 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 336 cgtcggcgccgacatcaagcactgccag 363
>dbj|D55714.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1167 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 243 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 302 Query: 345 gcgtc 349 ||||| Sbjct: 303 gcgtc 307
>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1145 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 280 cctccacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||| ||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 267 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 326 Query: 340 caagggcgtccccgtctccctctccatcggcgg 372 ||||||| || ||| ||||||||||||||| Sbjct: 327 caagggcatcgtcgtgctcctctccatcggcgg 359
>dbj|AB027423.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), partial cds, clone:C62532 Length = 989 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 225 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 284 Query: 345 gcgtc 349 ||||| Sbjct: 285 gcgtc 289
>dbj|AB027422.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C62515 Length = 996 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 229 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 288 Query: 345 gcgtc 349 ||||| Sbjct: 289 gcgtc 293
>dbj|AB027421.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C60416 Length = 1416 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| Sbjct: 239 acctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagg 298 Query: 345 gcgtc 349 ||||| Sbjct: 299 gcgtc 303
>ref|XM_483350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 894 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Plus Query: 268 cggcaagtaccacctccacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| ||||| || |||||||||| ||| | || |||||||||||||||||| Sbjct: 225 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 284 Query: 328 gcactgccag 337 ||||||||| Sbjct: 285 ccactgccag 294
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840850 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840791 Query: 369 gc 370 || Sbjct: 10840790 gc 10840789
>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full insert sequence Length = 1152 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaaggg 345 ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 283 tctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtccaaggg 340 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 220 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 160 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 212
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840549 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840490 Query: 369 gc 370 || Sbjct: 10840489 gc 10840488
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 107199 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 107140 Query: 369 gc 370 || Sbjct: 107139 gc 107138
>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase inhibitor protein Length = 2143 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgccagt 338 |||||| |||||||||||||||||||||| Sbjct: 1266 cgtcggtgccgacatcaagcactgccagt 1294
>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full insert sequence Length = 1317 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 322 acctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagg 381 Query: 345 gcgtc 349 ||||| Sbjct: 382 gcgtc 386
>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c), complete cds, clone:C12024 Length = 1148 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 285 acctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagg 344 ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 274 acctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagg 333 Query: 345 gcgtc 349 ||||| Sbjct: 334 gcgtc 338
>ref|NM_186678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 897 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 ||||||||||||||||||||||| |||| Sbjct: 778 cgtcggcgccgacatcaagcactaccag 751
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 ||||||||||||||||||||||| |||| Sbjct: 165275 cgtcggcgccgacatcaagcactaccag 165248
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full insert sequence Length = 1162 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 312 cgtcggcgccgacgtcaagcactgcca 338
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full insert sequence Length = 1193 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 316 cgtcggcgccgacgtcaagcactgcca 342
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full insert sequence Length = 1153 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 303 cgtcggcgccgacgtcaagcactgcca 329
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 323 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggcgg 372 |||||||||||||||| || |||| || |||| ||||||||||||||| Sbjct: 7513706 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcgg 7513755
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 323 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggcgg 372 |||||||||||||||| || |||| || |||| ||||||||||||||| Sbjct: 107412 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcgg 107461
>ref|XM_477712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 324 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcgg 372 ||||| |||||| || ||||||||||| |||| |||||| |||||||| Sbjct: 167 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcgg 215
>gb|AC139154.3| Mus musculus chromosome 7 clone RP24-356B8, complete sequence Length = 164774 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 atcaagcactgccagttcaag 343 ||||||||||||||||||||| Sbjct: 129440 atcaagcactgccagttcaag 129420
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagc 329 ||||||||||||||||||||| Sbjct: 2649855 ccgtcggcgccgacatcaagc 2649875
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0684A03 Length = 64705 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 324 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcgg 372 ||||| |||||| || ||||||||||| |||| |||||| |||||||| Sbjct: 42745 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcgg 42793
>dbj|AP002796.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-742N3, complete sequences Length = 93845 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cctggaggggagcgggcctcc 83 ||||||||||||||||||||| Sbjct: 37935 cctggaggggagcgggcctcc 37915
>gb|AC149062.3| Mus musculus BAC clone RP23-183E20 from 7, complete sequence Length = 229956 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcaagcactgccagttcaag 343 ||||||||||||||||||||| Sbjct: 134029 atcaagcactgccagttcaag 134049
>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence Length = 203937 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aacaagagaccaaagctact 25 |||||||||||||||||||| Sbjct: 73383 aacaagagaccaaagctact 73402
>emb|CR524174.1| Gallus gallus finished cDNA, clone ChEST765l1 Length = 1525 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ctcccaccctggaggggagc 75 |||||||||||||||||||| Sbjct: 382 ctcccaccctggaggggagc 363
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtggacaaaccaaaaatggc 51 |||||||||||||||||||| Sbjct: 2666244 gtggacaaaccaaaaatggc 2666225
>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 139597 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acaaaccaaaaatggcgccg 55 |||||||||||||||||||| Sbjct: 53416 acaaaccaaaaatggcgccg 53397 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,616,691 Number of Sequences: 3902068 Number of extensions: 2616691 Number of successful extensions: 50552 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49995 Number of HSP's gapped (non-prelim): 516 length of query: 372 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 350 effective length of database: 17,147,199,772 effective search space: 6001519920200 effective search space used: 6001519920200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
