Clone Name | bart60c07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2208 Score = 270 bits (136), Expect = 4e-69 Identities = 263/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 208 gcctgatgcgacggaagccggtcgactccgacagggcccgcgccg---aggggca---gc 261 |||||||||| ||||||| ||| ||||||||| ||| |||||||| ||||| | || Sbjct: 71 gcctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgagggggaagggc 130 Query: 262 agcagcagctcgccaaggagctcaacgtcctcgagctggtcgcgatcggggttggttcga 321 | | ||||||||||||||||| ||| ||| | ||||||||||||||| || ||||| | Sbjct: 131 aaccccagctcgccaaggagcttaacatcccggcgctggtcgcgatcggtgtcggttcaa 190 Query: 322 caattggagctggagtatatgttcttgtcggaacagttgccagggagcatgctggtccag 381 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 191 caattggagctggggtatatgttcttgtcggaacagttgctagggagcatgctggtccag 250 Query: 382 cattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattctgttatg 441 ||||| || |||| || |||||||||||||||||| | || || ||||| |||||||||| Sbjct: 251 cattgacaatttcatttctgatagctggaatagcttccgcgctctcagccttctgttatg 310 Query: 442 ccgagcttgctagccgttgcccctctgctggaagcgcctatcactattcatatatctgca 501 ||||||||||||| || ||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 311 ccgagcttgctagtcggtgcccatctgctggaagcgcctaccattattcatacatctgcg 370 Query: 502 ttgg 505 |||| Sbjct: 371 ttgg 374
>dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063A11, full insert sequence Length = 2455 Score = 270 bits (136), Expect = 4e-69 Identities = 263/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 208 gcctgatgcgacggaagccggtcgactccgacagggcccgcgccg---aggggca---gc 261 |||||||||| ||||||| ||| ||||||||| ||| |||||||| ||||| | || Sbjct: 335 gcctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgagggggaagggc 394 Query: 262 agcagcagctcgccaaggagctcaacgtcctcgagctggtcgcgatcggggttggttcga 321 | | ||||||||||||||||| ||| ||| | ||||||||||||||| || ||||| | Sbjct: 395 aaccccagctcgccaaggagcttaacatcccggcgctggtcgcgatcggtgtcggttcaa 454 Query: 322 caattggagctggagtatatgttcttgtcggaacagttgccagggagcatgctggtccag 381 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 455 caattggagctggggtatatgttcttgtcggaacagttgctagggagcatgctggtccag 514 Query: 382 cattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattctgttatg 441 ||||| || |||| || |||||||||||||||||| | || || ||||| |||||||||| Sbjct: 515 cattgacaatttcatttctgatagctggaatagcttccgcgctctcagccttctgttatg 574 Query: 442 ccgagcttgctagccgttgcccctctgctggaagcgcctatcactattcatatatctgca 501 ||||||||||||| || ||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 575 ccgagcttgctagtcggtgcccatctgctggaagcgcctaccattattcatacatctgcg 634 Query: 502 ttgg 505 |||| Sbjct: 635 ttgg 638
>dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A08, full insert sequence Length = 2110 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Plus Query: 267 cagctcgccaaggagctcaacgtcctcgagctggtcgcgatcggggttggttcgacaatt 326 ||||||||||||||||| ||| ||| | ||||||||||||||| || ||||| |||||| Sbjct: 45 cagctcgccaaggagcttaacatcccggcgctggtcgcgatcggtgtcggttcaacaatt 104 Query: 327 ggagctggagtatatgttcttgtcggaacagttgccagggagcatgctggtccagcattg 386 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 105 ggagctggggtatatgttcttgtcggaacagttgctagggagcatgctggtccagcattg 164 Query: 387 gcagtttcgttcctgatagctggaatagctgctgcactttcagcattctgttatgccgag 446 || |||| || |||||||||||||||||| | || || ||||| ||||||||||||||| Sbjct: 165 acaatttcatttctgatagctggaatagcttccgcgctctcagccttctgttatgccgag 224 Query: 447 cttgctagccgttgcccctctgctggaagcgcctatcactattcatatatctgcattgg 505 |||||||| || ||||| ||||||||||||||||| || |||||||| |||||| |||| Sbjct: 225 cttgctagtcggtgcccatctgctggaagcgcctaccattattcatacatctgcgttgg 283
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 228 bits (115), Expect = 1e-56 Identities = 172/191 (90%) Strand = Plus / Minus Query: 315 ggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcatgct 374 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 117983 ggttcaacaattggagctggggtatatgttcttgtcggaacagttgctagggagcatgct 117924 Query: 375 ggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattc 434 |||||||||||| || |||| || |||||||||||||||||| | || || ||||| ||| Sbjct: 117923 ggtccagcattgacaatttcatttctgatagctggaatagcttccgcgctctcagccttc 117864 Query: 435 tgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattcatat 494 |||||||||||||||||||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 117863 tgttatgccgagcttgctagtcggtgcccatctgctggaagcgcctaccattattcatac 117804 Query: 495 atctgcattgg 505 |||||| |||| Sbjct: 117803 atctgcgttgg 117793 Score = 50.1 bits (25), Expect = 0.007 Identities = 89/109 (81%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 208 gcctgatgcgacggaagccggtcgactccgacagggcccgcgccg---aggggca---gc 261 |||||||||| ||||||| ||| ||||||||| ||| |||||||| ||||| | || Sbjct: 119230 gcctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgagggggaagggc 119171 Query: 262 agcagcagctcgccaaggagctcaacgtcctcgagctggtcgcgatcgg 310 | | ||||||||||||||||| ||| ||| | ||||||||||||||| Sbjct: 119170 aaccccagctcgccaaggagcttaacatcccggcgctggtcgcgatcgg 119122
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 228 bits (115), Expect = 1e-56 Identities = 172/191 (90%) Strand = Plus / Plus Query: 315 ggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcatgct 374 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 80764 ggttcaacaattggagctggggtatatgttcttgtcggaacagttgctagggagcatgct 80823 Query: 375 ggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattc 434 |||||||||||| || |||| || |||||||||||||||||| | || || ||||| ||| Sbjct: 80824 ggtccagcattgacaatttcatttctgatagctggaatagcttccgcgctctcagccttc 80883 Query: 435 tgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattcatat 494 |||||||||||||||||||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 80884 tgttatgccgagcttgctagtcggtgcccatctgctggaagcgcctaccattattcatac 80943 Query: 495 atctgcattgg 505 |||||| |||| Sbjct: 80944 atctgcgttgg 80954 Score = 50.1 bits (25), Expect = 0.007 Identities = 89/109 (81%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 208 gcctgatgcgacggaagccggtcgactccgacagggcccgcgccg---aggggca---gc 261 |||||||||| ||||||| ||| ||||||||| ||| |||||||| ||||| | || Sbjct: 79517 gcctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgagggggaagggc 79576 Query: 262 agcagcagctcgccaaggagctcaacgtcctcgagctggtcgcgatcgg 310 | | ||||||||||||||||| ||| ||| | ||||||||||||||| Sbjct: 79577 aaccccagctcgccaaggagcttaacatcccggcgctggtcgcgatcgg 79625
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 228 bits (115), Expect = 1e-56 Identities = 172/191 (90%) Strand = Plus / Minus Query: 315 ggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcatgct 374 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 25221944 ggttcaacaattggagctggggtatatgttcttgtcggaacagttgctagggagcatgct 25221885 Query: 375 ggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattc 434 |||||||||||| || |||| || |||||||||||||||||| | || || ||||| ||| Sbjct: 25221884 ggtccagcattgacaatttcatttctgatagctggaatagcttccgcgctctcagccttc 25221825 Query: 435 tgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattcatat 494 |||||||||||||||||||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 25221824 tgttatgccgagcttgctagtcggtgcccatctgctggaagcgcctaccattattcatac 25221765 Query: 495 atctgcattgg 505 |||||| |||| Sbjct: 25221764 atctgcgttgg 25221754 Score = 50.1 bits (25), Expect = 0.007 Identities = 89/109 (81%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 208 gcctgatgcgacggaagccggtcgactccgacagggcccgcgccg---aggggca---gc 261 |||||||||| ||||||| ||| ||||||||| ||| |||||||| ||||| | || Sbjct: 25223191 gcctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgagggggaagggc 25223132 Query: 262 agcagcagctcgccaaggagctcaacgtcctcgagctggtcgcgatcgg 310 | | ||||||||||||||||| ||| ||| | ||||||||||||||| Sbjct: 25223131 aaccccagctcgccaaggagcttaacatcccggcgctggtcgcgatcgg 25223083
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 228 bits (115), Expect = 1e-56 Identities = 172/191 (90%) Strand = Plus / Minus Query: 315 ggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcatgct 374 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 25313316 ggttcaacaattggagctggggtatatgttcttgtcggaacagttgctagggagcatgct 25313257 Query: 375 ggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattc 434 |||||||||||| || |||| || |||||||||||||||||| | || || ||||| ||| Sbjct: 25313256 ggtccagcattgacaatttcatttctgatagctggaatagcttccgcgctctcagccttc 25313197 Query: 435 tgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattcatat 494 |||||||||||||||||||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 25313196 tgttatgccgagcttgctagtcggtgcccatctgctggaagcgcctaccattattcatac 25313137 Query: 495 atctgcattgg 505 |||||| |||| Sbjct: 25313136 atctgcgttgg 25313126 Score = 50.1 bits (25), Expect = 0.007 Identities = 89/109 (81%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 208 gcctgatgcgacggaagccggtcgactccgacagggcccgcgccg---aggggca---gc 261 |||||||||| ||||||| ||| ||||||||| ||| |||||||| ||||| | || Sbjct: 25314563 gcctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgagggggaagggc 25314504 Query: 262 agcagcagctcgccaaggagctcaacgtcctcgagctggtcgcgatcgg 310 | | ||||||||||||||||| ||| ||| | ||||||||||||||| Sbjct: 25314503 aaccccagctcgccaaggagcttaacatcccggcgctggtcgcgatcgg 25314455
>dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F01, full insert sequence Length = 2516 Score = 200 bits (101), Expect = 3e-48 Identities = 252/300 (84%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 210 ctgatgcgacggaagccggtcgactccgacagggcccgcgccgaggggcagcagcagcag 269 |||||||| ||||||| ||| ||||||||| ||| |||||||| || | || || ||| Sbjct: 278 ctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgg-cggc--caccag 334 Query: 270 ctcgccaaggagctcaacgtcctcgagctggtcgcgatcggggttggttcgacaattgga 329 ||||||||||||||| ||| |||| |||||||| || |||||||| ||||||||| Sbjct: 335 ctcgccaaggagctctccgttacgcagctcgtcgcgattggtgttggttcaacaattgga 394 Query: 330 gctggagtatatgttcttgtcggaacagttgccagggagcatgctggtccagcattggca 389 |||||||||||||||||||| ||||||||||| ||||||||||||| || |||||| || Sbjct: 395 gctggagtatatgttcttgtgggaacagttgctcgggagcatgctgggccggcattgaca 454 Query: 390 gtttcgttcctgatagctggaatagctgctgcactttcagcattctgttatgccgagctt 449 |||| || |||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 455 ctttcatttctgatagctggagtggcagctgcactctcagctttctgttatgcagagctt 514 Query: 450 gctagccgttgcccctctgctggaagcgcctatcactattcatatatctgcattggcgaa 509 ||||| || ||||| ||||| ||||| ||||| || ||||| || |||||| |||||||| Sbjct: 515 gctagtcgctgcccttctgcaggaagtgcctaccattattcgtacatctgcgttggcgaa 574
>dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D03, full insert sequence Length = 2272 Score = 200 bits (101), Expect = 3e-48 Identities = 252/300 (84%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 210 ctgatgcgacggaagccggtcgactccgacagggcccgcgccgaggggcagcagcagcag 269 |||||||| ||||||| ||| ||||||||| ||| |||||||| || | || || ||| Sbjct: 34 ctgatgcggcggaagcaggtggactccgaccgggtccgcgccgccgg-cggc--caccag 90 Query: 270 ctcgccaaggagctcaacgtcctcgagctggtcgcgatcggggttggttcgacaattgga 329 ||||||||||||||| ||| |||| |||||||| || |||||||| ||||||||| Sbjct: 91 ctcgccaaggagctctccgttacgcagctcgtcgcgattggtgttggttcaacaattgga 150 Query: 330 gctggagtatatgttcttgtcggaacagttgccagggagcatgctggtccagcattggca 389 |||||||||||||||||||| ||||||||||| ||||||||||||| || |||||| || Sbjct: 151 gctggagtatatgttcttgtgggaacagttgctcgggagcatgctgggccggcattgaca 210 Query: 390 gtttcgttcctgatagctggaatagctgctgcactttcagcattctgttatgccgagctt 449 |||| || |||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 211 ctttcatttctgatagctggagtggcagctgcactctcagctttctgttatgcagagctt 270 Query: 450 gctagccgttgcccctctgctggaagcgcctatcactattcatatatctgcattggcgaa 509 ||||| || ||||| ||||| ||||| ||||| || ||||| || |||||| |||||||| Sbjct: 271 gctagtcgctgcccttctgcaggaagtgcctaccattattcgtacatctgcgttggcgaa 330
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 186 bits (94), Expect = 5e-44 Identities = 172/198 (86%) Strand = Plus / Minus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 26658486 gttggttcaacaattggagctggagtatatgttcttgtgggaacagttgctcgggagcat 26658427 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 ||||| || |||||| || |||| || |||||||||||| | || |||||||| ||||| Sbjct: 26658426 gctgggccggcattgacactttcatttctgatagctggagtggcagctgcactctcagct 26658367 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 ||||||||||| ||||||||||| || ||||| ||||| ||||| ||||| || ||||| Sbjct: 26658366 ttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattattcg 26658307 Query: 492 tatatctgcattggcgaa 509 || |||||| |||||||| Sbjct: 26658306 tacatctgcgttggcgaa 26658289
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 186 bits (94), Expect = 5e-44 Identities = 172/198 (86%) Strand = Plus / Minus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 26586655 gttggttcaacaattggagctggagtatatgttcttgtgggaacagttgctcgggagcat 26586596 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 ||||| || |||||| || |||| || |||||||||||| | || |||||||| ||||| Sbjct: 26586595 gctgggccggcattgacactttcatttctgatagctggagtggcagctgcactctcagct 26586536 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 ||||||||||| ||||||||||| || ||||| ||||| ||||| ||||| || ||||| Sbjct: 26586535 ttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattattcg 26586476 Query: 492 tatatctgcattggcgaa 509 || |||||| |||||||| Sbjct: 26586475 tacatctgcgttggcgaa 26586458
>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101173 Score = 186 bits (94), Expect = 5e-44 Identities = 172/198 (86%) Strand = Plus / Minus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 77356 gttggttcaacaattggagctggagtatatgttcttgtgggaacagttgctcgggagcat 77297 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 ||||| || |||||| || |||| || |||||||||||| | || |||||||| ||||| Sbjct: 77296 gctgggccggcattgacactttcatttctgatagctggagtggcagctgcactctcagct 77237 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 ||||||||||| ||||||||||| || ||||| ||||| ||||| ||||| || ||||| Sbjct: 77236 ttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattattcg 77177 Query: 492 tatatctgcattggcgaa 509 || |||||| |||||||| Sbjct: 77176 tacatctgcgttggcgaa 77159
>gb|AC148965.3| Medicago truncatula chromosome 7 BAC clone mth2-10f21, complete sequence Length = 97477 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 321 acaattggagctggagtatatgttcttgtcggaacagttgccagggagcatgctggtcca 380 ||||| ||||||||||||||| ||||| | ||||||||||| |||||||| || || ||| Sbjct: 80025 acaataggagctggagtatatattcttattggaacagttgctagggagcaggcaggacca 80084 Query: 381 gcattggcagtttcgttcctgatagctggaatagctgctgcactttcagcattctgttat 440 ||| | | | | || || | || |||||||||||||||||||||||||| || |||||| Sbjct: 80085 gcacttgtaatatcactctttattgctggaatagctgctgcactttcagcgttgtgttat 80144 Query: 441 gccgagcttgc 451 || || ||||| Sbjct: 80145 gcagaacttgc 80155
>gb|AC137986.27| Medicago truncatula clone mth2-7g6, complete sequence Length = 128361 Score = 75.8 bits (38), Expect = 1e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 |||||||| |||||||| |||||||| |||||| | || |||||||| || || |||||| Sbjct: 9753 gttggttcaacaattggtgctggagtctatgttttggttggaacagtagctagagagcat 9812 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 |||| || || ||||| |||| || ||||| ||||| |||| |||| |||||||| Sbjct: 9813 tctggaccggctttggctatttcttttctgattgctgggttagcagctggtctttcagcc 9872 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 || |||||||| ||| | ||| | | ||||| |||||||| || || |||||||||||| Sbjct: 9873 ttttgttatgcagagttagcttgtagatgcccttctgctgggagtgcatatcactattca 9932 Query: 492 ta 493 || Sbjct: 9933 ta 9934
>gb|BT013668.1| Lycopersicon esculentum clone 132487R, mRNA sequence Length = 2235 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 407 tggaatagctgctgcactttcagcattctgttatgccgagcttgctagccgttgcccctc 466 |||| |||| ||||| ||||| ||||| |||||||| |||||||| | || ||||| || Sbjct: 333 tggattagcggctgctctttctgcattttgttatgcagagcttgcgtgtcgctgcccatc 392 Query: 467 tgctggaagcgcctatcactattcatatatctgcattgg 505 ||||||||| || ||||| || |||||| |||||||||| Sbjct: 393 tgctggaagtgcatatcattactcatatgtctgcattgg 431 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 330 gctggagtatatgttcttgtcggaacagttgccagggagca 370 |||||||| ||| ||||||| |||||||||||||| ||||| Sbjct: 256 gctggagtctatattcttgttggaacagttgccagagagca 296
>ref|NM_196668.1| Oryza sativa (japonica cultivar-group) putative cationic amino acid transporter -like protein (OSJNBb0040I11.4), mRNA Length = 2022 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 366 gagcatgctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactt 425 |||||||| || ||||| ||| | |||| || ||||||||||| ||||| ||||| ||| Sbjct: 412 gagcatgcaggaccagccttgaccctttcctttctgatagctggcatagcagctgctctt 471 Query: 426 tcagcattctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcac 485 |||||||| || ||||| ||||| || |||||| || | || ||||| ||||||||| Sbjct: 472 tcagcattgtgctatgcagagctctcttgccgttttccattggcgggaagtgcctatcac 531 Query: 486 tattcatatatctgcattgg 505 || ||||| || |||||||| Sbjct: 532 tactcatacatttgcattgg 551
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 366 gagcatgctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactt 425 |||||||| || ||||| ||| | |||| || ||||||||||| ||||| ||||| ||| Sbjct: 15120556 gagcatgcaggaccagccttgaccctttcctttctgatagctggcatagcagctgctctt 15120497 Query: 426 tcagcattctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcac 485 |||||||| || ||||| ||||| || |||||| || | || ||||| ||||||||| Sbjct: 15120496 tcagcattgtgctatgcagagctctcttgccgttttccattggcgggaagtgcctatcac 15120437 Query: 486 tattcatatatctgcattgg 505 || ||||| || |||||||| Sbjct: 15120436 tactcatacatttgcattgg 15120417
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 366 gagcatgctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactt 425 |||||||| || ||||| ||| | |||| || ||||||||||| ||||| ||||| ||| Sbjct: 29169 gagcatgcaggaccagccttgaccctttcctttctgatagctggcatagcagctgctctt 29110 Query: 426 tcagcattctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcac 485 |||||||| || ||||| ||||| || |||||| || | || ||||| ||||||||| Sbjct: 29109 tcagcattgtgctatgcagagctctcttgccgttttccattggcgggaagtgcctatcac 29050 Query: 486 tattcatatatctgcattgg 505 || ||||| || |||||||| Sbjct: 29049 tactcatacatttgcattgg 29030
>dbj|AK100205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041E12, full insert sequence Length = 2216 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 366 gagcatgctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactt 425 |||||||| || ||||| ||| | |||| || ||||||||||| ||||| ||||| ||| Sbjct: 308 gagcatgcaggaccagccttgaccctttcctttctgatagctggcatagcagctgctctt 367 Query: 426 tcagcattctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcac 485 |||||||| || ||||| ||||| || |||||| || | || ||||| ||||||||| Sbjct: 368 tcagcattgtgctatgcagagctctcttgccgttttccattggcgggaagtgcctatcac 427 Query: 486 tattcatatatctgcattgg 505 || ||||| || |||||||| Sbjct: 428 tactcatacatttgcattgg 447
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 366 gagcatgctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactt 425 |||||||| || ||||| ||| | |||| || ||||||||||| ||||| ||||| ||| Sbjct: 15128797 gagcatgcaggaccagccttgaccctttcctttctgatagctggcatagcagctgctctt 15128738 Query: 426 tcagcattctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcac 485 |||||||| || ||||| ||||| || |||||| || | || ||||| ||||||||| Sbjct: 15128737 tcagcattgtgctatgcagagctctcttgccgttttccattggcgggaagtgcctatcac 15128678 Query: 486 tattcatatatctgcattgg 505 || ||||| || |||||||| Sbjct: 15128677 tactcatacatttgcattgg 15128658
>ref|NM_123052.3| Arabidopsis thaliana CAT3 (CATIONIC AMINO ACID TRANSPORTER 3); cationic amino acid transporter AT5G36940 (CAT3) mRNA, complete cds Length = 2213 Score = 60.0 bits (30), Expect = 7e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| || ||||||||||| || || ||| ||||||| |||||||| || || |||||| Sbjct: 263 gttggatcaacaattggagcaggggtttatattcttgtgggaacagtagctagagagcat 322 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 | || || || | || | || ||||| ||||||||||| ||||||| ||||| || Sbjct: 323 tcaggacctgctcttgctttatccttccttatagctggaatttctgctgccctttctgcg 382 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 || |||||||| || || |||| |||| ||||||||||| || |||||||| ||||| Sbjct: 383 ttttgttatgcggaactatctagtcgttttccctctgctgggagtgcctatcattattct 442 Query: 492 tatatctgcattgg 505 || || |||||||| Sbjct: 443 tacatttgcattgg 456
>emb|BX830631.1|CNS09YPZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2107 Score = 60.0 bits (30), Expect = 7e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| || ||||||||||| || || ||| ||||||| |||||||| || || |||||| Sbjct: 273 gttggatcaacaattggagcaggggtttatattcttgtgggaacagtagctagagagcat 332 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 | || || || | || | || ||||| ||||||||||| ||||||| ||||| || Sbjct: 333 tcaggacctgctcttgctttatccttccttatagctggaatttctgctgccctttctgcg 392 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 || |||||||| || || |||| |||| ||||||||||| || |||||||| ||||| Sbjct: 393 ttttgttatgcggaactatctagtcgttttccctctgctgggagtgcctatcattattct 452 Query: 492 tatatctgcattgg 505 || || |||||||| Sbjct: 453 tacatttgcattgg 466
>dbj|AB016877.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLF18 Length = 74842 Score = 60.0 bits (30), Expect = 7e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| || ||||||||||| || || ||| ||||||| |||||||| || || |||||| Sbjct: 50434 gttggatcaacaattggagcaggggtttatattcttgtgggaacagtagctagagagcat 50493 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 | || || || | || | || ||||| ||||||||||| ||||||| ||||| || Sbjct: 50494 tcaggacctgctcttgctttatccttccttatagctggaatttctgctgccctttctgcg 50553 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 || |||||||| || || |||| |||| ||||||||||| || |||||||| ||||| Sbjct: 50554 ttttgttatgcggaactatctagtcgttttccctctgctgggagtgcctatcattattct 50613 Query: 492 tatatctgcattgg 505 || || |||||||| Sbjct: 50614 tacatttgcattgg 50627
>dbj|AK117747.1| Arabidopsis thaliana At5g36940 mRNA for putative cationic amino acid transporter, complete cds, clone: RAFL17-43-G07 Length = 2097 Score = 60.0 bits (30), Expect = 7e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 312 gttggttcgacaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| || ||||||||||| || || ||| ||||||| |||||||| || || |||||| Sbjct: 147 gttggatcaacaattggagcaggggtttatattcttgtgggaacagtagctagagagcat 206 Query: 372 gctggtccagcattggcagtttcgttcctgatagctggaatagctgctgcactttcagca 431 | || || || | || | || ||||| ||||||||||| ||||||| ||||| || Sbjct: 207 tcaggacctgctcttgctttatccttccttatagctggaatttctgctgccctttctgcg 266 Query: 432 ttctgttatgccgagcttgctagccgttgcccctctgctggaagcgcctatcactattca 491 || |||||||| || || |||| |||| ||||||||||| || |||||||| ||||| Sbjct: 267 ttttgttatgcggaactatctagtcgttttccctctgctgggagtgcctatcattattct 326 Query: 492 tatatctgcattgg 505 || || |||||||| Sbjct: 327 tacatttgcattgg 340
>ref|NM_179491.1| Arabidopsis thaliana CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid-polyamine transporter AT1G58030 (CAT2) mRNA, complete cds Length = 2366 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 321 acaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| ||||||||||| ||| ||||||| ||||||||||| || |||||| Sbjct: 448 acaataggagctggagtttatattcttgtaggaacagttgcgagagagcat 498 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Plus Query: 405 gctggaatagctgctgcactttcagcattctgttatgccgagcttgctagccgttgcccc 464 |||||||| ||||||| ||||| || || |||||||| || || |||| |||||||| Sbjct: 532 gctggaattgctgctggtctttctgcgttttgttatgctgaactctctagtcgttgccct 591 Query: 465 tctgctggaagcgcctatcactattc 490 || ||||| || || ||||||||||| Sbjct: 592 tcagctgggagtgcgtatcactattc 617
>gb|BT000457.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 2349 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 321 acaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| ||||||||||| ||| ||||||| ||||||||||| || |||||| Sbjct: 446 acaataggagctggagtttatattcttgtaggaacagttgcgagagagcat 496 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Plus Query: 405 gctggaatagctgctgcactttcagcattctgttatgccgagcttgctagccgttgcccc 464 |||||||| ||||||| ||||| || || |||||||| || || |||| |||||||| Sbjct: 530 gctggaattgctgctggtctttctgcgttttgttatgctgaactctctagtcgttgccct 589 Query: 465 tctgctggaagcgcctatcactattc 490 || ||||| || || ||||||||||| Sbjct: 590 tcagctgggagtgcgtatcactattc 615
>gb|AF367304.1| Arabidopsis thaliana AT5g36940/MLF18_60 mRNA, complete cds Length = 2327 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 321 acaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| ||||||||||| ||| ||||||| ||||||||||| || |||||| Sbjct: 438 acaataggagctggagtttatattcttgtaggaacagttgcgagagagcat 488 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Plus Query: 405 gctggaatagctgctgcactttcagcattctgttatgccgagcttgctagccgttgcccc 464 |||||||| ||||||| ||||| || || |||||||| || || |||| |||||||| Sbjct: 522 gctggaattgctgctggtctttctgcgttttgttatgctgaactctctagtcgttgccct 581 Query: 465 tctgctggaagcgcctatcactattc 490 || ||||| || || ||||||||||| Sbjct: 582 tcagctgggagtgcgtatcactattc 607
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete sequence Length = 103637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 321 acaattggagctggagtatatgttcttgtcggaacagttgccagggagcat 371 ||||| ||||||||||| ||| ||||||| ||||||||||| || |||||| Sbjct: 29558 acaataggagctggagtttatattcttgtaggaacagttgcgagagagcat 29508 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Minus Query: 405 gctggaatagctgctgcactttcagcattctgttatgccgagcttgctagccgttgcccc 464 |||||||| ||||||| ||||| || || |||||||| || || |||| |||||||| Sbjct: 29474 gctggaattgctgctggtctttctgcgttttgttatgctgaactctctagtcgttgccct 29415 Query: 465 tctgctggaagcgcctatcactattc 490 || ||||| || || ||||||||||| Sbjct: 29414 tcagctgggagtgcgtatcactattc 29389
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 cgactccgacagggcccgcgc 250 ||||||||||||||||||||| Sbjct: 78198 cgactccgacagggcccgcgc 78178
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gctcgccaaggagctcaacgt 289 ||||||||||||||||||||| Sbjct: 4504747 gctcgccaaggagctcaacgt 4504727
>ref|NM_116307.3| Arabidopsis thaliana structural constituent of ribosome AT4G00810 transcript variant AT4G00810.1 mRNA, complete cds Length = 676 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 377 aggggcagcagcagcagctc 358
>ref|NM_178947.2| Arabidopsis thaliana structural constituent of ribosome AT4G00810 transcript variant AT4G00810.2 mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 299 aggggcagcagcagcagctc 280
>ref|XM_512454.1| PREDICTED: Pan troglodytes similar to Human homolog of Mus musculus wizL protein (LOC455796), mRNA Length = 5466 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 1679 aggggcagcagcagcagctc 1698
>ref|XM_518034.1| PREDICTED: Pan troglodytes platelet-derived growth factor receptor beta (LOC462188), mRNA Length = 5594 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 gaggggcagcagcagcagctcgcc 275 ||||||||||| |||||||||||| Sbjct: 963 gaggggcagcaacagcagctcgcc 940
>ref|NM_021267.2| Homo sapiens LAG1 longevity assurance homolog 1 (S. cerevisiae) (LASS1), transcript variant 1, mRNA Length = 2565 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 273 cgcgccgagcgccagcagcagcagctcg 246
>ref|NG_003110.1| Homo sapiens LAG1 longevity assurance homolog 1 (S. cerevisiae), growth differentiation factor 1 transcription unit (LASS1-GDF1) on chromosome 19 Length = 28600 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 773 cgcgccgagcgccagcagcagcagctcg 746
>ref|XM_879196.1| PREDICTED: Bos taurus similar to longevity assurance gene 1 isoform 1, transcript variant 2 (LOC615296), mRNA Length = 1568 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 |||||| |||| |||||||||||||||| Sbjct: 214 cgcgccaagggccagcagcagcagctcg 187
>ref|XM_866827.1| PREDICTED: Bos taurus similar to longevity assurance gene 1 isoform 1, transcript variant 1 (LOC615296), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 |||||| |||| |||||||||||||||| Sbjct: 214 cgcgccaagggccagcagcagcagctcg 187
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cgccgcccaatccccgcgtaaacc 94 |||||||||| ||||||||||||| Sbjct: 395089 cgccgcccaagccccgcgtaaacc 395112
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 243 gcccgcgccgaggggcagcagcagcagc 270 |||||||||||| ||||||| ||||||| Sbjct: 2352062 gcccgcgccgagcggcagcatcagcagc 2352089
>ref|NM_198207.1| Homo sapiens LAG1 longevity assurance homolog 1 (S. cerevisiae) (LASS1), transcript variant 2, mRNA Length = 2110 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 273 cgcgccgagcgccagcagcagcagctcg 246
>gb|BC063720.1| Xenopus laevis hypothetical protein LOC399077, mRNA (cDNA clone IMAGE:3396482), partial cds Length = 2059 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 ttggagctggagtatatgttcttg 348 ||||||||||||||||||| |||| Sbjct: 240 ttggagctggagtatatgtccttg 263
>gb|AC106745.4| Homo sapiens chromosome 16 clone RP11-134D3, complete sequence Length = 164238 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gaggggcagcagcagcagct 271 |||||||||||||||||||| Sbjct: 30368 gaggggcagcagcagcagct 30387
>gb|BC032615.1| Homo sapiens growth differentiation factor 1, mRNA (cDNA clone IMAGE:5557395), containing frame-shift errors Length = 2065 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 199 cgcgccgagcgccagcagcagcagctcg 172
>gb|AC122842.3| Mus musculus BAC clone RP23-148K14 from 1, complete sequence Length = 209506 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ttggagctggagtatatgtt 344 |||||||||||||||||||| Sbjct: 208157 ttggagctggagtatatgtt 208176
>emb|CR703593.2|CNS0G5UD Tetraodon nigroviridis full-length cDNA Length = 1082 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gcgccgaggggcagcagcagcagc 270 |||||||| ||||||||||||||| Sbjct: 215 gcgccgagcggcagcagcagcagc 192
>gb|AC025047.17| Mus musculus chromosome 1, clone RP23-56I8, complete sequence Length = 220713 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ttggagctggagtatatgtt 344 |||||||||||||||||||| Sbjct: 82633 ttggagctggagtatatgtt 82614
>emb|BX058964.1|CNS09HNS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39CD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 921 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gcgccgaggggcagcagcagcagc 270 |||||||||| ||||||||||||| Sbjct: 869 gcgccgagggacagcagcagcagc 846
>emb|BX058963.1|CNS09HNR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC39CD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 959 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gcgccgaggggcagcagcagcagc 270 |||||||||| ||||||||||||| Sbjct: 398 gcgccgagggacagcagcagcagc 421
>emb|X90384.1|ATY19GENE A.thaliana DNA for Y19 gene Length = 2973 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 atcactattcatatatctgc 500 |||||||||||||||||||| Sbjct: 1730 atcactattcatatatctgc 1711
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 agctcgccaaggagctcaacgtcc 291 |||||||| ||||||||||||||| Sbjct: 2331442 agctcgcccaggagctcaacgtcc 2331419
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 243 gcccgcgccgaggggcagcagcagcagc 270 |||||||||||| ||||||| ||||||| Sbjct: 513474 gcccgcgccgagcggcagcatcagcagc 513501
>gb|BC022450.1| Homo sapiens growth differentiation factor 1, mRNA (cDNA clone MGC:25992 IMAGE:4797772), complete cds Length = 2101 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 264 cgcgccgagcgccagcagcagcagctcg 237
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gaggggcagcagcagcagct 271 |||||||||||||||||||| Sbjct: 131471 gaggggcagcagcagcagct 131452
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 153031 aggggcagcagcagcagctc 153050
>gb|AF448249.1| Streptococcus thermophilus strain MR-1C exopolysaccharide synthesis gene cluster, complete sequence; insertion sequences IS1193-1, IS1193-2, IS1193-3, IS1193-4, IS1194, IS981C1, IS981C2, IS981SB, ISS1SA, ISS1SB, ISS1SC, partial sequence; and adjacent rpi to orfhppm pseudogenes, partial sequence Length = 44380 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gcagtttcgttcctgatagc 406 |||||||||||||||||||| Sbjct: 37542 gcagtttcgttcctgatagc 37523
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170129 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgaggggcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 86805 cgaggggcagcagcagcagc 86786
>emb|CR623677.1| full-length cDNA clone CS0DN002YE17 of Adult brain of Homo sapiens (human) Length = 2006 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 216 cgcgccgagcgccagcagcagcagctcg 189
>gb|AC092500.2| Homo sapiens chromosome 3 clone RP11-111P21, complete sequence Length = 182569 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tggtccagcattggcagttt 393 |||||||||||||||||||| Sbjct: 43353 tggtccagcattggcagttt 43372
>emb|CR594445.1| full-length cDNA clone CS0DN005YG07 of Adult brain of Homo sapiens (human) Length = 1400 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 205 cgcgccgagcgccagcagcagcagctcg 178
>ref|NM_001492.3| Homo sapiens growth differentiation factor 1 (GDF1), mRNA Length = 2565 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 273 cgcgccgagcgccagcagcagcagctcg 246
>gb|AF361624.1| Arabidopsis thaliana AT4g00810/A_TM018A10_9 mRNA, complete cds Length = 578 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 299 aggggcagcagcagcagctc 280
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gaggggcagcagcagcagct 271 |||||||||||||||||||| Sbjct: 87731 gaggggcagcagcagcagct 87750
>gb|AC156542.9| Mus musculus chromosome 1, clone RP23-370J16, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 ttgctagccgttgcccctctgctg 471 ||||||||| |||||||||||||| Sbjct: 103230 ttgctagcccttgcccctctgctg 103207
>gb|AY055096.1| Arabidopsis thaliana AT4g00810/A_TM018A10_9 mRNA, complete cds Length = 342 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 270 aggggcagcagcagcagctc 251
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 gcccgcgccgaggggcagcagcagcagc 270 |||||||||||| ||||||| ||||||| Sbjct: 1964818 gcccgcgccgagcggcagcatcagcagc 1964791
>gb|AC112679.15| Mus musculus chromosome 1, clone RP23-199H14, complete sequence Length = 185805 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 ttgctagccgttgcccctctgctg 471 ||||||||| |||||||||||||| Sbjct: 48893 ttgctagcccttgcccctctgctg 48870
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gaggggcagcagcagcagct 271 |||||||||||||||||||| Sbjct: 31553788 gaggggcagcagcagcagct 31553769
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ggcagcagcagcagctcgcc 275 |||||||||||||||||||| Sbjct: 23480435 ggcagcagcagcagctcgcc 23480416
>emb|BX826895.1|CNS0A430 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 577 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 278 aggggcagcagcagcagctc 259
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gaggggcagcagcagcagct 271 |||||||||||||||||||| Sbjct: 184806 gaggggcagcagcagcagct 184825
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence Length = 129402 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cgccgcccaatccccgcgtaaacc 94 |||||||||| ||||||||||||| Sbjct: 21561 cgccgcccaagccccgcgtaaacc 21584
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 239 cagggcccgcgccgaggggcagcagcag 266 |||||||||||| ||||||||||||||| Sbjct: 7828703 cagggcccgcgc-gaggggcagcagcag 7828729 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cgtcctcgagctggtcgcga 306 |||||||||||||||||||| Sbjct: 638440 cgtcctcgagctggtcgcga 638421
>gb|AY086636.1| Arabidopsis thaliana clone 26442 mRNA, complete sequence Length = 646 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 377 aggggcagcagcagcagctc 358
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cccgcgccgaggggcagcag 263 |||||||||||||||||||| Sbjct: 2660563 cccgcgccgaggggcagcag 2660544
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ggcagcagcagcagctcgcc 275 |||||||||||||||||||| Sbjct: 139990 ggcagcagcagcagctcgcc 139971
>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15 Length = 83689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 atcactattcatatatctgc 500 |||||||||||||||||||| Sbjct: 67683 atcactattcatatatctgc 67664
>emb|Z98171.1|STVLEXI Streptococcus thermophilus variable locus including exopolysaccharide synthesis genes and insertion sequences Length = 32479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 gcagtttcgttcctgatagc 406 |||||||||||||||||||| Sbjct: 1040 gcagtttcgttcctgatagc 1059
>gb|AF105005.1|HS1LAG1 Homo sapiens LAG1 protein (LAG1) gene, exon 1 Length = 2499 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 1719 cgcgccgagcgccagcagcagcagctcg 1692
>gb|AF124597.1|AF124597 Penaeus vannamei 18S ribosomal RNA, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, and 28S ribosomal RNA, complete sequence; intergenic spacer region, partial sequence Length = 8119 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgaggggcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 1401 cgaggggcagcagcagcagc 1382
>gb|AC007059.1|AC007059 Homo sapiens chromosome 19, cosmid R26549, complete sequence Length = 32303 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 26200 aggggcagcagcagcagctc 26181
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgaggggcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 247506 cgaggggcagcagcagcagc 247487
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 gcccgcgccgaggggcagcagcagcagc 270 |||||||||||| ||||||| ||||||| Sbjct: 2467516 gcccgcgccgagcggcagcatcagcagc 2467489
>gb|AC005197.1|AC005197 Homo sapiens chromosome 19, cosmid R32469, complete sequence Length = 39978 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 24057 cgcgccgagcgccagcagcagcagctcg 24084
>gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10 Length = 106184 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aggggcagcagcagcagctc 272 |||||||||||||||||||| Sbjct: 81534 aggggcagcagcagcagctc 81515
>gb|M62302.1|HUMGDF1 Human growth/differentiation factor 1 (GDF-1) mRNA, complete cds Length = 2510 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 cgcgccgaggggcagcagcagcagctcg 273 ||||||||| | |||||||||||||||| Sbjct: 225 cgcgccgagcgccagcagcagcagctcg 198 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,478,857 Number of Sequences: 3902068 Number of extensions: 3478857 Number of successful extensions: 219435 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 217975 Number of HSP's gapped (non-prelim): 1463 length of query: 509 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 487 effective length of database: 17,147,199,772 effective search space: 8350686288964 effective search space used: 8350686288964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)