ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60c05 |
|---|---|
| Clone Library Name | barley_pub |
>CHSS3_HUMAN (Q70JA7) Chondroitin sulfate synthase 3 (EC 2.4.1.175)| (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase II) (Chondroitin synthase 2) (N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase Length = 882 Score = 37.4 bits (85), Expect(2) = 2e-04 Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +2 Query: 158 PPLPPSATRVASL--SPFSTQPKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWEVRPGG 331 PPLP +A + S SP+ QP P R + R G GA AEGE E GG Sbjct: 86 PPLPEAAPGITSFRSSPWQ-QPPPLQQRR----RGREPEGATGLPGAPAAEGEPEEEDGG 140 Query: 332 MLVQRRDGEEG 364 QRRDG G Sbjct: 141 AAGQRRDGRPG 151 Score = 25.4 bits (54), Expect(2) = 2e-04 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPPLR 177 P + LP PR + SPPP R Sbjct: 55 PRAGAQQPLPQPQSRPRQEQSPPPAR 80
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 33.5 bits (75), Expect = 0.22 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +2 Query: 140 KPRATNPPLPPS-ATRVASLSPFSTQPKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWE 316 +P+A P P A RVA+ +PFS+ P+P A RP GGG RSG G Sbjct: 159 RPQAKPAPKPGGRAPRVAN-NPFSSGPRP----APRP-------GGGNRSGNAPRPGGGP 206 Query: 317 VRPGGMLVQRRDGEEGPTVR 376 RPGG Q G+ GP R Sbjct: 207 -RPGGNRPQ--GGQGGPAER 223
>HLY_HAL17 (P29143) Halolysin precursor (EC 3.4.21.-) (F-II)| Length = 530 Score = 32.3 bits (72), Expect = 0.49 Identities = 28/90 (31%), Positives = 39/90 (43%) Frame = -1 Query: 402 STGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQ 223 S+ PWD G S S + S P+ S A +L + +GLS+ Q Sbjct: 337 SSIPWDNYDTFSGTSMASPVVAGVAGFTLSAHPNLSNA-ELRSHLQNTAVDVGLSSEE-Q 394 Query: 222 GFGCVEKGESDATRVAEGGRGGLVARGFCG 133 G G V+ G++ T +GG GG G CG Sbjct: 395 GHGRVDAGQAVTTDPGDGGGGGDPGDGTCG 424
>CRCB1_STRCO (Q9FC39) Protein crcB homolog 1| Length = 154 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +2 Query: 215 PKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWEVRPGG 331 P G R + P+ A+GGGT + AR A W P G Sbjct: 17 PSRSGWRTQAPVVAVVALGGGTGAAARYAASLWWPTPAG 55
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 31.6 bits (70), Expect = 0.83 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Frame = +2 Query: 143 PRATNPPLPPSATRVASLSPFSTQP--------KPCGCRAERPIKRRTAMGGGTRSGARE 298 P T PP P+A + +P +P KP G R P + R GG R G + Sbjct: 142 PEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAPKPGGARPSGPGQDRGQQGGQGRPGG-Q 200 Query: 299 AEGEWEVRPGG 331 G RPGG Sbjct: 201 RPGAPAQRPGG 211
>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)| Length = 1096 Score = 31.6 bits (70), Expect = 0.83 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Frame = +2 Query: 143 PRATNPP-LPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAM-------GGGTRSGARE 298 P +T P P++T AS S S+Q G E P + ++ GT SG++ Sbjct: 979 PASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSSSLADHEYTAAGTFSGSQA 1038 Query: 299 AEGEWEVRPGGMLVQRRDGEEGP 367 + PG L QRR P Sbjct: 1039 GRASQPMAPGVFLTQRRPSASSP 1061
>GATA4_RAT (P46152) Transcription factor GATA-4 (GATA-binding factor 4)| (DNA-binding protein GATA-GT2) Length = 440 Score = 31.6 bits (70), Expect = 0.83 Identities = 22/79 (27%), Positives = 28/79 (35%) Frame = -1 Query: 327 PGRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGFGCVEKGESDATRVAEGGRGGLVA 148 PG HS A+ +P VP P +GLS G G S + A G Sbjct: 23 PGAFMHSAGAASSPVYVPTPRVPSSVLGLSYLQGGGSGAASGATSGGSSGAGPSGAGPGT 82 Query: 147 RGFCGGWEAGLARGRGFLP 91 + GW A G + P Sbjct: 83 QQGSPGWSQAGAEGAAYTP 101
>TNFL6_FELCA (Q861W5) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily member 6, solub Length = 280 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 5/70 (7%) Frame = -1 Query: 408 SRSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSH-----SPSASLAPDLVPPPIAVLLFMG 244 SR++ PW GP L C S PGR P +L P PPP+ L Sbjct: 17 SRASSPW-------GPPGSVLPCPSSVPGRPGQRRPPPPPPPTLPPPPPPPPLPPLPLPP 69 Query: 243 LSARHPQGFG 214 L R G Sbjct: 70 LKTRRDHNTG 79
>PROQ_YERPE (Q8ZFJ9) ProP effector| Length = 237 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 91 GKEPATAGEAGLPPSAKAPRHQPSPPPLRHAR 186 GK+PA EAG P + PR P P +R R Sbjct: 141 GKKPAPRREAGAAPENRKPRQSPRPQQVRPPR 172
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 30.8 bits (68), Expect = 1.4 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Frame = +2 Query: 143 PRATNPP-LPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAM-------GGGTRSGARE 298 P +T P P++T AS S S+Q G E P + ++ GT +GA+ Sbjct: 983 PASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSSSLADHEYTAAGTFTGAQA 1042 Query: 299 AEGEWEVRPGGMLVQRRDGEEGP 367 + PG L QRR P Sbjct: 1043 GRTSQPMAPGVFLTQRRPSASSP 1065
>CSPB_BACGO (P41018) Cold shock protein cspB (Fragment)| Length = 57 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -1 Query: 255 LFMGLSARHPQGFGCVEKGESDATRVAEGGRG 160 +F+ SA +GF C+E+G++ + + EG RG Sbjct: 21 VFVHFSAIQGEGFKCLEEGQAVSFEIVEGNRG 52
>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor| Length = 307 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +2 Query: 140 KPRATNPPLP-PSATRVASLSPFSTQPKPCGCRAERP 247 KP T P P+ T+ + P T PKPCGC++ P Sbjct: 232 KPTTTKPTTTKPTTTKPTTTKP--TTPKPCGCKSCGP 266
>FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)| (p120/p130) (SLP-76-associated phosphoprotein) (SLAP-130) Length = 819 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/55 (27%), Positives = 23/55 (41%) Frame = -1 Query: 429 AXGGTKTSRSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPI 265 A ++S P+ T SL P + +P +H P SL P + PP+ Sbjct: 362 ADSANSATKSQTPYSTTSLPPPPPTHPASQPPLPASHPAHPPVPSLPPRNIKPPL 416
>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)| (Proline-rich synapse associated protein 2) (ProSAP2) (SPANK-2) Length = 1815 Score = 30.0 bits (66), Expect = 2.4 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 11/105 (10%) Frame = -1 Query: 369 VGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPP----------IAVLLFMGLSARHPQG 220 + PS P + PG S +P A PPP + F+ + A PQG Sbjct: 508 ISPSGPGGSGPAPGPGPASPAPPA-------PPPRGPKRKLYSAVPGRKFIAVKAHSPQG 560 Query: 219 FGCVEKGESDATRVAEGGRGGLVARGFCGGWEAGLARGR-GFLPS 88 G + +A +V G GG WE G +GR G+ P+ Sbjct: 561 EGEIPLHRGEAVKVLSIGEGGF--------WE-GTVKGRTGWFPA 596
>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding| protein MBD6) Length = 1003 Score = 30.0 bits (66), Expect = 2.4 Identities = 30/92 (32%), Positives = 39/92 (42%) Frame = -1 Query: 378 SLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGFGCVEKG 199 SL + P P C +PP SP+++L P+ PP++ L S P +G Sbjct: 800 SLQIPPEQPEAPC--LPP----ESPASALEPEPARPPLSALAPPHGSPDPPVPELLTGRG 853 Query: 198 ESDATRVAEGGRGGLVARGFCGGWEAGLARGR 103 G RGG RG G EA ARGR Sbjct: 854 SG-----KRGRRGGGGLRGING--EARPARGR 878
>HLF_RAT (Q64709) Hepatic leukemia factor| Length = 295 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +1 Query: 115 EAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWVP 234 E G+PPS H P PP L+ A A + +D + P Sbjct: 94 ENGIPPSPSQHDHSPHPPGLQPASSTAPSVMDLSSRATAP 133
>HLF_MOUSE (Q8BW74) Hepatic leukemia factor| Length = 295 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +1 Query: 115 EAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWVP 234 E G+PPS H P PP L+ A A + +D + P Sbjct: 94 ENGIPPSPSQHDHSPHPPGLQPASSTAPSVMDLSSRATAP 133
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 378 SLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPP 271 S +V P SPS+R PP S+SPS ++ P + PP Sbjct: 542 SPSVRPKSPSVRP---PPPDPSNSPSITVDPSVTPP 574
>UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion| degradation protein 2) (Homozygously deleted in neuroblastoma 1) Length = 1302 Score = 29.6 bits (65), Expect = 3.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 137 QKPRATNPPLPPSATRVASLSPFSTQPKP 223 Q+P +T PPLPP++ S P S + P Sbjct: 370 QRPSSTGPPLPPASPSATSRRPSSLRISP 398
>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1377 Score = 29.6 bits (65), Expect = 3.2 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +2 Query: 137 QKPRATNPPLPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWE 316 Q+P + PPL P+ + L+ Q +P G R+E P R + GG R + G Sbjct: 275 QEPGPSVPPLVPARSSSYHLALQPPQSRPSGARSESP--RLSRKGGHERPPSPGLRGLLT 332 Query: 317 VRPGG-MLVQRRDGEEGP 367 P +L + R E P Sbjct: 333 DSPAATVLAEARRATESP 350
>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2| Length = 945 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +1 Query: 97 EPATAGEAGLPPSAKAPRHQPSPPPLR 177 EPAT E+G P +AP PS PPLR Sbjct: 184 EPATV-ESGAPAKPEAPVRAPSRPPLR 209
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)| Length = 401 Score = 25.0 bits (53), Expect(2) = 3.4 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 23/92 (25%) Frame = +2 Query: 158 PPLPPSATRVASLSPFSTQPKPC-------------------GCRAERPIKR----RTAM 268 PP PP L+ + QP+P GC+ E+P+ + A Sbjct: 78 PPPPPPPPPPQHLAAPAHQPQPAAQLHRTTNFFIDNILRPDFGCKKEQPLPQLLVASAAA 137 Query: 269 GGGTRSGAREAEGEWEVRPGGMLVQRRDGEEG 364 GGG +G GG V+R G+ G Sbjct: 138 GGGAAAG------------GGSRVERDRGQTG 157 Score = 23.1 bits (48), Expect(2) = 3.4 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPP 171 P+ LPP A P P PPP Sbjct: 55 PSPPAAPCLPPLAHHPHLPPHPPP 78
>HLF_HUMAN (Q16534) Hepatic leukemia factor| Length = 295 Score = 29.3 bits (64), Expect = 4.1 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +1 Query: 115 EAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWVP 234 E G+PPS H P PP L+ A A + +D + P Sbjct: 94 ENGIPPSPSQHDHSPHPPGLQPASSAAPSVMDLSSRASAP 133
>MMP21_HUMAN (Q8N119) Matrix metalloproteinase-21 precursor (EC 3.4.24.-)| (MMP-21) Length = 569 Score = 29.3 bits (64), Expect = 4.1 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +1 Query: 127 PPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWVP 234 PP AP P PPP +RR A L + W P Sbjct: 124 PPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQP 159
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPP 171 PATA + LPPS + H PSP P Sbjct: 1511 PATAPSSTLPPSQSSFAHVPSPAP 1534
>GATA4_HUMAN (P43694) Transcription factor GATA-4 (GATA-binding factor 4)| Length = 442 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/79 (25%), Positives = 27/79 (34%) Frame = -1 Query: 327 PGRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGFGCVEKGESDATRVAEGGRGGLVA 148 PG H A+ +P +P P +GLS G G G S + G Sbjct: 23 PGPFMHGAGAASSPVYLPTPRVPSSVLGLSYLQGGGAGSASGGPSGGSPGGAASGAGPGT 82 Query: 147 RGFCGGWEAGLARGRGFLP 91 + GW A G + P Sbjct: 83 QQGSPGWSQAGATGAAYTP 101
>TILS_NOCFA (Q5Z2W1) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 318 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +2 Query: 164 LPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAMGGGTRSGAREA 301 L P + VA + + Q + GCR+ R ++ R GG + AREA Sbjct: 54 LQPGSDAVAVAA--AAQARTLGCRSARVLRVRVGSDGGLEAAAREA 97
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = +1 Query: 91 GKEPATAGEAGLPPS-AKAPRHQPSPPPLRHARRVAF----AFLDATEA 222 G EP + G+ PPS A P PPPLR+ R + +FLD E+ Sbjct: 350 GSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFES 398
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = +1 Query: 91 GKEPATAGEAGLPPS-AKAPRHQPSPPPLRHARRVAF----AFLDATEA 222 G EP + G+ PPS A P PPPLR+ R + +FLD E+ Sbjct: 350 GSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFES 398
>TCF8_MOUSE (Q64318) Transcription factor 8 (Zinc finger homeobox protein 1a)| (MEB1) (Delta EF1) Length = 1117 Score = 28.9 bits (63), Expect = 5.4 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 4/84 (4%) Frame = -1 Query: 417 TKTSRSTGPWD----TLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIAVLLF 250 TKT P D T G S +R + + P ++ + S S P P+ + Sbjct: 634 TKTDEQPQPADGNEPQEDSTRGQSPVKIRSSPVLPVGSAMNGSRSCTSS--PSPLNLC-- 689 Query: 249 MGLSARHPQGFGCVEKGESDATRV 178 SAR+PQG+ CV +G + +V Sbjct: 690 ---SARNPQGYSCVAEGAQEEPQV 710
>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)| Length = 290 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +1 Query: 88 GGKEPATAGEAGLPPSAKAPRHQPSPPP 171 GG PA A +A PP P H P PPP Sbjct: 97 GGGSPAAAYQAAPPP----PPHPPPPPP 120
>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) (Protein 59) (Fragment) Length = 553 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = -1 Query: 390 WDTLSLTVGPSSPSLRCTSIP--PGRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGF 217 WD + P P R ++P PG T + S+S + P P+ L S HP G Sbjct: 322 WDLTEDVLYPHPPLARTRTLPGTPGTTPPAASSSRGGEPGPGPLPRSLSRSNSLPHPAGG 381 Query: 216 G 214 G Sbjct: 382 G 382
>MAGE1_MACFA (Q9BE18) Melanoma-associated antigen E1 (MAGE-E1 antigen)| Length = 957 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -1 Query: 423 GGTKTSRSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAP 286 GG TS P + LS +V P++ TS+PP PS S+ P Sbjct: 314 GGLSTSVPPTPGEGLSTSVPPTATEGLSTSVPP-TPGEGPSTSVLP 358
>DPYL1_RAT (Q62950) Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin| response mediator protein 1) (CRMP-1) Length = 572 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWVPCREAHK 252 PAT A PSAK+ + PPP+R+ + F+ A P R H+ Sbjct: 507 PATPKHAAPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHR 557
>DPYL1_MOUSE (P97427) Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin| response mediator protein 1) (CRMP-1) (ULIP3 protein) Length = 572 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWVPCREAHK 252 PAT A PSAK+ + PPP+R+ + F+ A P R H+ Sbjct: 507 PATPKHAAPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHR 557
>CSP_PLAKU (P04922) Circumsporozoite protein precursor (CS)| Length = 351 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +1 Query: 88 GGKEPATAGEAGLPPSAKAPRHQPSPPPLR 177 GG++PA AG G P+A A QP+P P R Sbjct: 204 GGEQPA-AGARGEQPAAGAGGEQPAPAPRR 232
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 25.8 bits (55), Expect(2) = 5.4 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPP 171 PA A PP ++AP P PPP Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPP 326 Score = 21.6 bits (44), Expect(2) = 5.4 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +2 Query: 158 PPLPPSATRVASLSPFSTQPKP 223 PP PPS V ++P P P Sbjct: 359 PPPPPSVLGVGPVAPPPPPPPP 380
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 23.9 bits (50), Expect(2) = 5.9 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +2 Query: 158 PPLPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAMGGGTRS 286 PPLP S ++ AS P + P P P A G T+S Sbjct: 2595 PPLPQSTSKAASGPPPTLPPAP-----PLPQSTSKAASGATQS 2632 Score = 23.1 bits (48), Expect(2) = 5.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +1 Query: 115 EAGLPPSAKAPRHQPSPPPL 174 ++ +PPS AP P PPL Sbjct: 2536 KSAVPPSVPAPPTLPPAPPL 2555
>RHLB_VIBPA (Q87KH5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = +2 Query: 215 PKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWEVRP 325 P P RA R +RRT GG TRSG R+ +G +P Sbjct: 394 PAPIRMRAPRVQQRRTNTGG-TRSGNRKPQGRRPRQP 429
>GLMU_CORJK (Q4JU42) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 487 Score = 28.5 bits (62), Expect = 7.1 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Frame = -1 Query: 384 TLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIAVLL------FMGLSARHPQ 223 T+ V S S+ + G ++S + ++ + VPP V+ G A+ Sbjct: 398 TVGSHVRTGSDSMFIAPVVVGDGAYSGAGTVIKEDVPPGALVVSGGKQRNVEGWVAKKRP 457 Query: 222 GFGCVEKGESDATRVAEGG 166 G E GE+ A RVAEGG Sbjct: 458 GTPAAEAGEAAAKRVAEGG 476
>ZN683_HUMAN (Q8IZ20) Zinc finger protein 683| Length = 509 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 91 GKEPATAGEAGLPPSAKAPRHQPSPPPLRHAR 186 GK+P AGE G P A + + SPPPL++ + Sbjct: 120 GKQPERAGE-GAPCPAFSSHNSSSPPPLQNRK 150
>NUMB1_CAEEL (Q9XTY6) Numb-related protein 1 (Protein kinase C adapter 1) (CKA1)| Length = 593 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 100 PATAGEAGLPPSAKAPRHQPSPPPLRHA 183 P+T+ + LP S P H P P P+R A Sbjct: 505 PSTSSYSVLPKSGPPPAHAPPPLPVRQA 532
>ADM2_HUMAN (Q7Z4H4) ADM2 precursor (Intermedin) [Contains: Adrenomedullin-2| (Intermedin-long) (IMDL); Intermedin-short (IMDS)] Length = 148 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = +2 Query: 143 PRATNPPLPPSATRVASLSPFSTQPKPC------GCRAERPIKRRTAMGGGTRSGAREAE 304 PR P PP+ + +SL P P+P +A+R MG R G R+ Sbjct: 31 PRPVKPREPPARSPSSSLQPRHPAPRPVVWKLHRALQAQRGAGLAPVMGQPLRDGGRQHS 90 Query: 305 G 307 G Sbjct: 91 G 91
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -1 Query: 384 TLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPP 268 T S T PS P+ T++PP TS + + P + PP Sbjct: 1730 TPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1768
>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E1) (Cellulase E1) (Endocellulase E1) Length = 562 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = -1 Query: 420 GTKTSRSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIA 262 G S S+ P ++S + PS PS T P + SP+ +L P P P A Sbjct: 400 GASASPSSQPSPSVSPSPSPS-PSASRTPTPTPTPTASPTPTLTPTATPTPTA 451
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = +2 Query: 152 TNPPLPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWEVR 322 ++ P P + +R ++P PKPC K G G+R E+EG+ V+ Sbjct: 166 SSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVK 222
>BRCA2_FELCA (Q864S8) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3372 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +2 Query: 158 PPLPPSATRVASLSPFSTQP-KPCGCRAERPIKRR 259 PP+ P T V+ + + QP + CG + E PIK+R Sbjct: 3226 PPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKR 3260
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 24.3 bits (51), Expect(2) = 9.0 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = +1 Query: 97 EPATAGEAGLPPSAKAPRHQPSPPP 171 +P+ ++ P P QPSPPP Sbjct: 157 KPSPPDQSAKQPPQPPPAKQPSPPP 181 Score = 22.3 bits (46), Expect(2) = 9.0 Identities = 9/23 (39%), Positives = 11/23 (47%) Frame = +2 Query: 155 NPPLPPSATRVASLSPFSTQPKP 223 +PP PP + S SP P P Sbjct: 178 SPPPPPPPVKAPSPSPAKQPPPP 200
>RHG04_HUMAN (P98171) Rho-GTPase-activating protein 4 (Rho-GAP hematopoietic| protein C1) (p115) Length = 946 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/74 (29%), Positives = 26/74 (35%) Frame = -1 Query: 423 GGTKTSRSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIAVLLFMG 244 G T + GP T S + GP SP + P R + S P P Sbjct: 884 GKTSVRQGLGPASTTSPSPGPRSPK----APPSSRLGRNKGFSRGPGAPASP-------- 931 Query: 243 LSARHPQGFGCVEK 202 SA HPQG K Sbjct: 932 -SASHPQGLDTTPK 944
>KBL_MOUSE (O88986) 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial| precursor (EC 2.3.1.29) (AKB ligase) (Glycine acetyltransferase) Length = 416 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/66 (33%), Positives = 28/66 (42%) Frame = -1 Query: 429 AXGGTKTSRSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPPIAVLLF 250 A GG +TGP +SL S P L S+PP AS A DL+ A++ Sbjct: 263 ALGGASGGYTTGPEPLVSLLRQRSRPYLFSNSLPPAVVG---CASKALDLLMESNAIIQS 319 Query: 249 MGLSAR 232 M R Sbjct: 320 MAAKTR 325
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 7/35 (20%) Frame = +1 Query: 88 GGKEPATAGEAGLP-------PSAKAPRHQPSPPP 171 GG P AG AG P P APR + +PPP Sbjct: 1082 GGAPPPGAGRAGPPGGRGMPAPGGAAPRGRGAPPP 1116
>MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1| Length = 1319 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/61 (32%), Positives = 25/61 (40%) Frame = +2 Query: 146 RATNPPLPPSATRVASLSPFSTQPKPCGCRAERPIKRRTAMGGGTRSGAREAEGEWEVRP 325 +A+ PP PP+ SLSP T G +P+ GGG R R V P Sbjct: 901 KASGPPNPPAQGDGTSLSPNYTLESTSG-NDGKPVS-----GGGGRGRGRRKRDSGHVSP 954 Query: 326 G 328 G Sbjct: 955 G 955
>ZIC3_HUMAN (O60481) Zinc finger protein ZIC 3 (Zinc finger protein of the| cerebellum 3) Length = 467 Score = 28.1 bits (61), Expect = 9.2 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -1 Query: 324 GRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGFGCVE-KGESDATRVAEGGRGGLVA 148 G + S S+ AP +P P + LLF GL H QG G G D +V G RG L Sbjct: 138 GLFAGSASSLHAPAGIPEPPSYLLFPGL---HEQGAGHPSPTGHVDNNQVHLGLRGELFG 194 Query: 147 R 145 R Sbjct: 195 R 195
>ZIC3_MOUSE (Q62521) Zinc finger protein ZIC 3 (Zinc finger protein of the| cerebellum 3) Length = 466 Score = 28.1 bits (61), Expect = 9.2 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -1 Query: 324 GRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGFGCVE-KGESDATRVAEGGRGGLVA 148 G + S S+ AP +P P + LLF GL H QG G G D +V G RG L Sbjct: 137 GLFAGSASSLHAPAGIPEPPSYLLFPGL---HEQGAGHPSPTGHVDNNQVHLGLRGELFG 193 Query: 147 R 145 R Sbjct: 194 R 194
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = -1 Query: 423 GGTKTS---RSTGPWDTLSLTVGPSSPSLRCTSIPPGRTSHSPSASLAPDLVPPP 268 GGT++S S+GPW SL+ SSPS TS PGR++ + PPP Sbjct: 24 GGTESSPGWGSSGPW---SLSPSDSSPS-GVTSRLPGRSTSLVEGRSCGWVPPPP 74
>JPH3_HUMAN (Q8WXH2) Junctophilin-3 (Junctophilin type 3) (JP-3)| Length = 748 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -1 Query: 180 VAEGGRGGLVARG-FCGGWEAGLARGRG 100 ++ GGR G +CGGWE G A G G Sbjct: 1 MSSGGRFNFDDGGSYCGGWEDGKAHGHG 28
>IDLC_RAT (Q4FZV3) Axonemal dynein light intermediate polypeptide 1 (Inner| dynein arm light chain, axonemal) Length = 258 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +1 Query: 94 KEPATAGEAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWV 231 ++P +G PP AK P P P + A + A L E WV Sbjct: 36 QQPGPSGAGPQPPKAKLPSTSCVPDPTKQAEEILNAILPPRE--WV 79
>IDLC_HUMAN (O14645) Axonemal dynein light intermediate polypeptide 1 (Inner| dynein arm light chain, axonemal) (hp28) Length = 258 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +1 Query: 94 KEPATAGEAGLPPSAKAPRHQPSPPPLRHARRVAFAFLDATEALWV 231 ++P +G A PP K P P P + A + A L E WV Sbjct: 36 QQPGPSGSAPQPPKTKLPSTPCVPDPTKQAEEILNAILPPRE--WV 79
>GATA4_MOUSE (Q08369) Transcription factor GATA-4 (GATA-binding factor 4)| Length = 440 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/79 (26%), Positives = 27/79 (34%) Frame = -1 Query: 327 PGRTSHSPSASLAPDLVPPPIAVLLFMGLSARHPQGFGCVEKGESDATRVAEGGRGGLVA 148 PG HS A+ +P VP P +GLS G S + A G Sbjct: 23 PGAFMHSAGAASSPVYVPTPRVPSSVLGLSYLQGGGSAAAAGTTSGGSSGAGPSGAGPGT 82 Query: 147 RGFCGGWEAGLARGRGFLP 91 + GW A G + P Sbjct: 83 QQGSPGWSQAGAEGAAYTP 101
>JPH3_MOUSE (Q9ET77) Junctophilin-3 (Junctophilin type 3) (JP-3)| Length = 744 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -1 Query: 180 VAEGGRGGLVARG-FCGGWEAGLARGRG 100 ++ GGR G +CGGWE G A G G Sbjct: 1 MSSGGRFNFDDGGSYCGGWEDGKAHGHG 28 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.132 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,322,453 Number of Sequences: 219361 Number of extensions: 870376 Number of successful extensions: 5283 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 4245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5248 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
