ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60b04 |
|---|---|
| Clone Library Name | barley_pub |
>GALM_PIG (Q9GKX6) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 98.6 bits (244), Expect = 7e-21 Identities = 45/97 (46%), Positives = 63/97 (64%) Frame = +3 Query: 180 YELKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQ 359 ++L+ V + +WG TI ++ V D +G +DVVLG L EY+ YFG + GRVA Sbjct: 22 FQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFAELKEYLQKHPYFGAVVGRVAN 81 Query: 360 RMARGRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 R+A+G F LDGK Y +N+G N++HGG RGF KV+W Sbjct: 82 RIAKGTFTLDGKEYKLAINNGPNSLHGGVRGFDKVLW 118
>GALM_BOVIN (Q5EA79) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 98.2 bits (243), Expect = 9e-21 Identities = 44/97 (45%), Positives = 63/97 (64%) Frame = +3 Query: 180 YELKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQ 359 ++L+ V + +WG TI ++ V D +G +DVVLG D L Y+ YFG + GRVA Sbjct: 22 FQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQKQPYFGAVVGRVAN 81 Query: 360 RMARGRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 R+A+G F LDGK Y +N+G N++HGG +GF KV+W Sbjct: 82 RIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLW 118
>GALM_RAT (Q66HG4) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 97.4 bits (241), Expect = 2e-20 Identities = 44/97 (45%), Positives = 63/97 (64%) Frame = +3 Query: 180 YELKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQ 359 ++L+ +V + +WG TI ++ V D +G +DVVLG L Y+ YFG + GRVA Sbjct: 22 FQLRSDQLNVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVGRVAN 81 Query: 360 RMARGRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 R+A+GRF +DGK YH +N N++HGG RGF KV+W Sbjct: 82 RIAKGRFTVDGKEYHLPINREPNSLHGGFRGFDKVLW 118
>GALM_MOUSE (Q8K157) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 93.6 bits (231), Expect = 2e-19 Identities = 43/97 (44%), Positives = 61/97 (62%) Frame = +3 Query: 180 YELKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQ 359 ++L+ SV + +WG TI ++ V D +G +DVVLG L Y+ YFG + GRVA Sbjct: 22 FQLRSDQLSVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVGRVAN 81 Query: 360 RMARGRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 R+A+GRF + GK YH +N N++HGG GF KV+W Sbjct: 82 RIAKGRFTIGGKEYHLPVNREPNSLHGGFTGFDKVLW 118
>GALM_HUMAN (Q96C23) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| (BLOCK25 protein) Length = 342 Score = 92.4 bits (228), Expect = 5e-19 Identities = 43/97 (44%), Positives = 61/97 (62%) Frame = +3 Query: 180 YELKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQ 359 ++L+ V + +WG TI ++ V D +G +DVVLG L Y+ YFG + GRVA Sbjct: 22 FQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVAN 81 Query: 360 RMARGRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 R+A+G F +DGK YH +N N++HGG RGF KV+W Sbjct: 82 RIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLW 118
>GALM_PONPY (Q5R8U1) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 92.0 bits (227), Expect = 7e-19 Identities = 43/97 (44%), Positives = 61/97 (62%) Frame = +3 Query: 180 YELKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQ 359 ++L+ V + +WG TI ++ V D +G +DVVLG L Y+ YFG + GRVA Sbjct: 22 FQLQSDLLRVDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQKQPYFGAVIGRVAN 81 Query: 360 RMARGRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 R+A+G F +DGK YH +N N++HGG RGF KV+W Sbjct: 82 RIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLW 118
>GALM_ACICA (P05149) Aldose 1-epimerase precursor (EC 5.1.3.3) (Mutarotase)| Length = 381 Score = 76.6 bits (187), Expect = 3e-14 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 4/93 (4%) Frame = +3 Query: 204 SVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEY-VNDTS---YFGPLNGRVAQRMAR 371 SV ++G I IL PD++G ++VLG D L Y V DT +FG L GR A R+ Sbjct: 49 SVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGYEVTDTKEGIHFGGLIGRYANRIGN 108 Query: 372 GRFVLDGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 +F LDGK Y+ N+G N++H G GF K +W Sbjct: 109 AKFSLDGKTYNLEKNNGPNSLHSGNPGFDKRVW 141
>GALM_SHIFL (P0A9C4) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 346 Score = 63.9 bits (154), Expect = 2e-10 Identities = 30/88 (34%), Positives = 48/88 (54%) Frame = +3 Query: 207 VKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQRMARGRFVL 386 V + +WGAT++S +P S G++ + +LG + Y + ++ G GR A R+A R+ Sbjct: 28 VTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTF 87 Query: 387 DGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 DG+ + G N +HGG GF K W Sbjct: 88 DGETVTLSPSQGVNQLHGGPEGFDKRRW 115
>GALM_ECOLI (P0A9C3) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 346 Score = 63.9 bits (154), Expect = 2e-10 Identities = 30/88 (34%), Positives = 48/88 (54%) Frame = +3 Query: 207 VKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQRMARGRFVL 386 V + +WGAT++S +P S G++ + +LG + Y + ++ G GR A R+A R+ Sbjct: 28 VTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTF 87 Query: 387 DGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 DG+ + G N +HGG GF K W Sbjct: 88 DGETVTLSPSQGVNQLHGGPEGFDKRRW 115
>GAL10_PACTA (P40801) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 689 Score = 55.1 bits (131), Expect = 9e-08 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Frame = +3 Query: 195 GDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVN-DTSYFGPLNGRVAQRMAR 371 G F V ++N GATI++ + K NL G D L Y+ D +FG GRVA R+++ Sbjct: 372 GKFEVSISNHGATIVAAKLNGIKLNL-----GFDNLKGYLREDNPFFGATIGRVANRISK 426 Query: 372 GRFVLDGKVYHTYLND-GKNAIHGGKRGFSK 461 G +++G Y LN+ + ++HGG G++K Sbjct: 427 GDLLINGTHYQVGLNELHRTSLHGGTYGYNK 457
>GALM_HAEIN (P31765) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 340 Score = 55.1 bits (131), Expect = 9e-08 Identities = 34/88 (38%), Positives = 49/88 (55%) Frame = +3 Query: 207 VKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQRMARGRFVL 386 V+ +WGAT +S VP + L +V+LG + Y SY G GR A R+A +F L Sbjct: 28 VQFMDWGATWLSCKVPVND-TLREVLLGCK-VDNYPTHQSYLGASVGRYANRIANAQFEL 85 Query: 387 DGKVYHTYLNDGKNAIHGGKRGFSKVIW 470 +G++ N GK+ +HGG+ GF K W Sbjct: 86 NGELIKLSSNQGKHQLHGGE-GFDKRRW 112
>GALM_LACHE (Q00053) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase) (Fragment)| Length = 129 Score = 53.1 bits (126), Expect = 3e-07 Identities = 26/79 (32%), Positives = 49/79 (62%) Frame = +3 Query: 207 VKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQRMARGRFVL 386 VK+ N+GAT+ +L+ D +++L +++ A+Y + +Y G GR+A R+ +G++ Sbjct: 29 VKVLNYGATLEKVLLNDE-----NMILSLNSPADYSQERNYLGGTVGRIAGRVRKGQWRH 83 Query: 387 DGKVYHTYLNDGKNAIHGG 443 + + +NDG+N IHGG Sbjct: 84 GLETHQLPINDGENHIHGG 102
>GAL10_SCHPO (Q9HDU3) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 713 Score = 51.2 bits (121), Expect = 1e-06 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%) Frame = +3 Query: 198 DFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEY-VNDTSYFGPLNGRVAQRMARG 374 D V + N+GA + ++ KG ++V G + + Y + + +FG GR A R+A G Sbjct: 377 DLEVSIANYGALVQAVRY---KGR--NLVNGFNDFSRYKLKENPFFGATIGRFANRIANG 431 Query: 375 RFVLDGKVYHTYLND-GKNAIHGGKRGFSK 461 +F +DG +Y N+ K +HGG GF K Sbjct: 432 QFEVDGHLYTLCKNENNKTTLHGGNNGFDK 461
>GAL10_YEAST (P04397) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 699 Score = 50.1 bits (118), Expect = 3e-06 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Frame = +3 Query: 201 FSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVN-DTSYFGPLNGRVAQRMARGR 377 F N GA+I+ D K N VVLG + Y+N D++Y G GR A R+++G+ Sbjct: 384 FQATFANLGASIV-----DLKVNGQSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGK 438 Query: 378 FVLDGKVYHTYLNDGKNAIHGGKRGFSK 461 F L K Y +N+G NA H F + Sbjct: 439 FSLCNKDYQLTVNNGVNANHSSIGSFHR 466
>GALM_STRTR (P21955) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 348 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/82 (31%), Positives = 39/82 (47%) Frame = +3 Query: 225 GATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYFGPLNGRVAQRMARGRFVLDGKVYH 404 GAT+ LVP G L ++VLG +Y + GRVA R+ + + + +Y Sbjct: 35 GATLQEFLVPMETGALKNIVLGFSDFEDYYKNNLCACQSIGRVAGRIGKASYTHNMVLYS 94 Query: 405 TYLNDGKNAIHGGKRGFSKVIW 470 N+G N +HGG +G W Sbjct: 95 LPKNEGDNCLHGGPKGMQVQNW 116
>GAL10_KLULA (P09609) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 688 Score = 47.4 bits (111), Expect = 2e-05 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Frame = +3 Query: 189 KRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTS-YFGPLNGRVAQRM 365 K F VK+ N GATI+ I+V N VV +D EY + ++ +FG G A R+ Sbjct: 369 KGTSFEVKLANLGATIVDIVV-----NGCSVVASLDNETEYKDQSNPFFGATVGPYANRI 423 Query: 366 ARGRFVLDGK-VYHTYLNDGKNAIHGG 443 A G F ++GK + T + N +H G Sbjct: 424 ANGTFEINGKRIQLTVSKEDGNVVHSG 450
>Y4160_CLOAB (P33747) Hypothetical protein CAP0160 precursor| Length = 967 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +3 Query: 198 DFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVND 320 D +VK W + S++ D KGN+ + LGM + VND Sbjct: 149 DSAVKDVTWTTSDPSVVSVDDKGNIKALKLGMAVVTAAVND 189
>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2207 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +1 Query: 295 TPSLNMLMTPLTLXXXXXXXXXXXXXAASSSTAKYTIPTSTTARTQFMVAKGGSA 459 TP +N TP+TL S +T ++++PT T RT GG+A Sbjct: 1010 TPQMN---TPVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTA 1061
>T240L_HUMAN (Q71F56) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2210 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +1 Query: 295 TPSLNMLMTPLTLXXXXXXXXXXXXXAASSSTAKYTIPTSTTARTQFMVAKGGSA 459 TP +N TP+TL S +T ++++PT T RT GG+A Sbjct: 1015 TPQMN---TPVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTA 1066
>DGTL1_RHIME (Q92Q32) Deoxyguanosinetriphosphate triphosphohydrolase-like| protein Length = 405 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 305 SEGVHAQHNIGQIPFGIRDEDG-HDGGAPVGHLDGEIASLELV 180 +EGV H+ G PFG ED H+ P G D SL +V Sbjct: 100 AEGVALVHDFGHTPFGHTGEDALHEVLEPYGGFDHNAQSLRIV 142
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 8/75 (10%) Frame = +1 Query: 124 ASRPLRWPAAPTRGRWSACTSSREAISPSR*PTGAPPSCP--------SSSLIPKGIWPM 279 ++ P P APT TS +SP T +PP P SS+ P + Sbjct: 4249 STAPPSTPTAPTT------TSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTT 4302 Query: 280 LCWAWTPSLNMLMTP 324 AWTP+ L TP Sbjct: 4303 TTSAWTPTPTPLSTP 4317
>MDM10_YEAST (P18409) Mitochondrial inheritance component MDM10| Length = 493 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -1 Query: 403 WYTLPSRTKRPLAILCATLPFSGPK*EVSLTYSARVSMPSTTSAKF 266 +YT + T RPL + + P G +S TYSA+ ST AK+ Sbjct: 254 YYTHSTNTGRPLTLTLSWNPLFG---HISSTYSAKTGTNSTFCAKY 296
>SSPO_BOVIN (P98167) SCO-spondin (Fragment)| Length = 867 Score = 29.6 bits (65), Expect = 4.1 Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 14/96 (14%) Frame = +1 Query: 82 GLQWRGLRRFPRSCASRPL--------------RWPAAPTRGRWSACTSSREAISPSR*P 219 G Q RGL R R C + P RW A P R C A P Sbjct: 225 GHQCRGLHRKARRCQTEPCEGCEQDGRVHRVGERWRAGPC--RVCQCLHDGSARCSPYCP 282 Query: 220 TGAPPSCPSSSLIPKGIWPMLCWAWTPSLNMLMTPL 327 G SCP ++ +G+ C P N + P+ Sbjct: 283 LG---SCPQDWVLVEGVGESCCHCVPPGENQTVHPM 315
>PTV3B_BACHD (Q9KF90) PTS system beta-glucoside-specific EIIBCA component| (EIIBCA-Bgl) (EII-Bgl) [Includes: Beta-glucoside-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system beta-glucoside-specific EIIB component); Beta-glucoside p Length = 636 Score = 29.3 bits (64), Expect = 5.3 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = -1 Query: 319 SLTYSARVSMPSTTSAKFPLESGTRMDM---MVAPQLVILTEKSPLLSSYTPTIF 164 SL Y + + T + KF M + +V P LV+LTE PL + +T TIF Sbjct: 153 SLFYFFPIFLGYTAAKKFGATPFIGMAIGASLVYPTLVVLTEGEPLYTLFTGTIF 207
>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)| Length = 1096 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Frame = -1 Query: 400 YTLPSRTKRPLAILCATLPFSGPK*EVSLTYSARVSMPSTTSAKFPLESGTRMDMMVAPQ 221 Y P R A+ AT + P+ S T +AR MP TS+ + + T M +PQ Sbjct: 638 YGAPQRQPSAEAVSAATNSYMPPQ---SPTAAARQQMPPRTSSSAAVAAATVATGMPSPQ 694 Query: 220 LVILTEKSPL---LSSYTPTIF 164 + + P+ L +Y P + Sbjct: 695 QMPAEQNRPMQPQLPTYDPKAY 716
>Y1022_METTH (O27101) Putative biopolymer transport protein exbB homolog| Length = 279 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +3 Query: 183 ELKRGDFSVKMTNWGATIMSILVPDSKGNLADVV 284 E+ + + KMTNWG +M I V +GN+ DVV Sbjct: 193 EIDKIELIKKMTNWGYAVMRISV---EGNVDDVV 223
>DGTL1_AGRT5 (Q8UEP3) Deoxyguanosinetriphosphate triphosphohydrolase-like| protein Length = 405 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Frame = -3 Query: 305 SEGVHAQHNIGQIPFGIRDEDGHDGG-APVGHLDGEIASLELV 180 +EGV H+ G PFG ED D P G D SL +V Sbjct: 100 AEGVALVHDFGHTPFGHTGEDALDAVLLPYGGFDHNAQSLRIV 142
>DS_DROME (Q24292) Protein dachsous precursor (Adherin)| Length = 3503 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +1 Query: 106 RFPRSCASRPLRWPAAPTRGRWSACTSSREAISPSR*PTGAPPSCPSSSLIPKGIWP 276 R P + P P +P S S+ A+SPS P+ +P + S S+ P G P Sbjct: 3419 RLPPHLSLAPAHLPRSPIGHEASGSFSTSSAMSPSFSPSLSPLATRSPSISPLGAGP 3475
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 3/74 (4%) Frame = +1 Query: 217 PTGAPPSCPSSSLIPKGIWPMLC---WAWTPSLNMLMTPLTLXXXXXXXXXXXXXAASSS 387 P PPS +S+ IWP P+ L +L + +SS Sbjct: 353 PPSVPPSTSTSTTSTSLIWPAQTHPPQPHRPTRPQLSPGTSLAASSSSHWPSSTTSTTSS 412 Query: 388 TAKYTIPTSTTART 429 T T T+TT RT Sbjct: 413 TTSTTTTTTTTRRT 426
>YGL7_YEAST (P53133) Hypothetical 30.8 kDa protein in ABC1-CDC20 intergenic| region Length = 265 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 186 LKRGDFSVKMTNWGATIMSILVPDSKGNLADVVLGMDTLAEYVNDTSYF 332 + RG+F + + + TI S +V DSK D + +DT+ +++DT F Sbjct: 153 VSRGNFMLDILHGYVTIASTIVRDSK----DANILIDTVNRFIHDTILF 197
>SYH_BIFLO (Q8G864) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 466 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +3 Query: 288 GMDTLAEYVNDTSYFGPLNGRVAQRMARGRFVLDGKVYHTYLN 416 G+DTLA V++ + P + ++ARG G VY T+L+ Sbjct: 267 GLDTLAMIVDEAAAIRPGSVIADLKIARGLDYYTGSVYETFLD 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,402,865 Number of Sequences: 219361 Number of extensions: 1333400 Number of successful extensions: 4725 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4442 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4719 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
