ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60a06 |
|---|---|
| Clone Library Name | barley_pub |
>LBD41_ARATH (Q9M886) LOB domain protein 41| Length = 263 Score = 174 bits (442), Expect(2) = 3e-44 Identities = 84/91 (92%), Positives = 87/91 (95%) Frame = +1 Query: 154 MRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDD 333 MR+SCNGCRVLRKGCSEDCSIRPCL WIKSPEAQANATVFLAKFYGRAGLMNLINAG + Sbjct: 1 MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAG-PN 59 Query: 334 SLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 LRPGIFRSLL+EACGRIVNPIYGSVGLLWS Sbjct: 60 HLRPGIFRSLLHEACGRIVNPIYGSVGLLWS 90 Score = 23.1 bits (48), Expect(2) = 3e-44 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +3 Query: 429 HWQMCQAAVEA 461 +WQ+CQ AVEA Sbjct: 92 NWQLCQDAVEA 102
>LBD40_ARATH (Q9ZW96) LOB domain protein 40| Length = 233 Score = 170 bits (430), Expect(2) = 5e-43 Identities = 81/91 (89%), Positives = 85/91 (93%) Frame = +1 Query: 154 MRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDD 333 MR+SCNGCRVLRKGCSE+CSIRPCLQWIKS E+QANATVFLAKFYGRAGLMNL+N G D Sbjct: 1 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTG-PD 59 Query: 334 SLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 LRP IFRSLLYEACGRIVNPIYGSVGLLWS Sbjct: 60 HLRPAIFRSLLYEACGRIVNPIYGSVGLLWS 90 Score = 23.5 bits (49), Expect(2) = 5e-43 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +3 Query: 429 HWQMCQAAVEA 461 +W +CQAAVEA Sbjct: 92 NWHLCQAAVEA 102
>LBD42_ARATH (Q9CA30) LOB domain protein 42| Length = 233 Score = 159 bits (403), Expect(2) = 3e-39 Identities = 75/97 (77%), Positives = 87/97 (89%), Gaps = 1/97 (1%) Frame = +1 Query: 154 MRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDD 333 MR+SCNGCRVLRKGC++DC+IRPCLQWIKS ++QANAT+FLAKFYGRAGL+NLI +G D Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESG-PD 59 Query: 334 SLRPGIFRSLLYEACGRIVNPIYGSVGLLWS-NTGRC 441 LRP IFRSLLYEACGRIVNP+ GSVGL+WS N +C Sbjct: 60 HLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQC 96 Score = 21.2 bits (43), Expect(2) = 3e-39 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +3 Query: 429 HWQMCQAAVEA 461 +W CQAAV+A Sbjct: 92 NWAQCQAAVDA 102
>LBD38_ARATH (Q9SN23) LOB domain protein 38| Length = 247 Score = 138 bits (347), Expect(2) = 6e-33 Identities = 62/89 (69%), Positives = 78/89 (87%) Frame = +1 Query: 160 LSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSL 339 +SCNGCRVLRKGCSE+C +RPC+QWI+SPEAQ +ATVF+AKF+GRAGLM+ I+A +S Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISA-VPESQ 59 Query: 340 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 P +F+SLLYEACGR VNP+ G+VGLLW+ Sbjct: 60 CPALFQSLLYEACGRTVNPVNGAVGLLWT 88 Score = 21.6 bits (44), Expect(2) = 6e-33 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +3 Query: 429 HWQMCQAAVE 458 +W +CQAAVE Sbjct: 90 NWNVCQAAVE 99
>LBD37_ARATH (Q9FN11) LOB domain protein 37| Length = 250 Score = 136 bits (342), Expect(2) = 2e-32 Identities = 59/89 (66%), Positives = 78/89 (87%) Frame = +1 Query: 160 LSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSL 339 +SCNGCRVLRKGCSE+C +RPC+QWI++ +AQ +ATVF+AKF+GRAGLM+ I+A DS Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISA-VPDSQ 59 Query: 340 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 RP +F+SLLYEACGR VNP+ G++G+LW+ Sbjct: 60 RPALFQSLLYEACGRTVNPVNGAIGMLWT 88 Score = 21.6 bits (44), Expect(2) = 2e-32 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +3 Query: 429 HWQMCQAAVE 458 +W +CQAAVE Sbjct: 90 NWNICQAAVE 99
>LBD39_ARATH (Q9SZE8) LOB domain protein 39| Length = 240 Score = 131 bits (329), Expect(2) = 5e-31 Identities = 58/89 (65%), Positives = 76/89 (85%) Frame = +1 Query: 160 LSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSL 339 +SCNGCRVLRKGCSE C +RPCLQWI+S E+Q +ATVF+AKF+GRAGLM+ I++ + Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISS-VPELQ 59 Query: 340 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 RP +F+SLL+EACGR VNP+ G+VG+LW+ Sbjct: 60 RPALFQSLLFEACGRTVNPVNGAVGMLWT 88 Score = 21.9 bits (45), Expect(2) = 5e-31 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = +3 Query: 426 QHWQMCQAAVE 458 ++W +CQAAVE Sbjct: 89 RNWHVCQAAVE 99
>LBD10_ARATH (O64836) Putative LOB domain protein 10| Length = 311 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/85 (31%), Positives = 43/85 (50%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C++LR+ C+++C P P +F+ + +G + + ++N D R Sbjct: 6 CAACKLLRRKCTQECVFAPYF-----PPTNPQKFIFVHRVFGASNVTKILNDLPPDQ-RE 59 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL YEA RI +PIYG VGL+ Sbjct: 60 DTVNSLFYEAEARIRDPIYGCVGLI 84
>ASL2_ARATH (Q9FKZ3) Protein ASYMMETRIC LEAVES2 (LOB domain protein 36)| Length = 313 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/85 (31%), Positives = 42/85 (49%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C+++C P P Q F+ K +G + + L+N + R Sbjct: 8 CAACKFLRRKCTQECVFAPYF-----PPDQPQKFAFVHKVFGASNVAKLLNELASNQ-RE 61 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL YEA R+ +P+YG VGL+ Sbjct: 62 DAVNSLFYEAEARLRDPVYGCVGLI 86
>LBD11_ARATH (Q9SK08) LOB domain protein 11| Length = 229 Score = 45.1 bits (105), Expect = 9e-05 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = +1 Query: 136 QGPTPTMRLS-CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNL 312 Q P P + LS C C++LR+ C++ C + P P A T+ + +G + ++ Sbjct: 42 QPPQPPVVLSPCAACKILRRRCADKCVLAPYFP----PTDPAKFTI-AHRVFGASNIIKF 96 Query: 313 INAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLW 423 + +S R S++YEA R+ +P+YG G ++ Sbjct: 97 LQE-LPESQRTDAVNSMVYEAGARMRDPVYGCAGAIY 132
>LBD1_ARATH (Q9LQR0) LOB domain protein 1| Length = 190 Score = 43.9 bits (102), Expect = 2e-04 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Frame = +1 Query: 115 SSTYTLSQGPTPTMRLS-------CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVF 273 ++T +S +P LS C C++LR+ C+E C + P P A T+ Sbjct: 10 ATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFP----PTDPAKFTI- 64 Query: 274 LAKFYGRAGLMNLINAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLW 423 + +G + ++ + +S R S++YEA RI +P+YG G ++ Sbjct: 65 AHRVFGASNIIKFLQE-LPESQRTDAVNSMVYEAEARIRDPVYGCAGAIY 113
>LBD6_ARATH (O04479) LOB domain protein 6 (ASYMMETRIC LEAVES2)| Length = 199 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/85 (30%), Positives = 39/85 (45%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C +C P P Q + K +G + + L+N S R Sbjct: 10 CAACKFLRRKCQPECVFAPYF-----PPDQPQKFANVHKVFGASNVTKLLNE-LHPSQRE 63 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL YEA R+ +P+YG VG++ Sbjct: 64 DAVNSLAYEADMRLRDPVYGCVGVI 88
>LBD14_ARATH (Q9SJW5) LOB domain protein 14| Length = 188 Score = 43.1 bits (100), Expect = 3e-04 Identities = 27/87 (31%), Positives = 42/87 (48%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C GC+ LR+ C E C P + E ++ + K +G + LI+ D R Sbjct: 8 CGGCKFLRRKCVEGCVFAPYFCY----EEGSSNFAAIHKVFGASNFSKLISHLPDHD-RC 62 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLLWS 426 R++ YEA R+ +PIYG V ++S Sbjct: 63 DAVRTISYEAHSRLHDPIYGCVSQIFS 89
>LBD21_ARATH (Q9SRL8) Putative LOB domain protein 21| Length = 165 Score = 42.4 bits (98), Expect = 6e-04 Identities = 27/97 (27%), Positives = 47/97 (48%) Frame = +1 Query: 136 QGPTPTMRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLI 315 +G P SC C++L++ C+ C P + +S + A V K +G + + L+ Sbjct: 2 RGHEPRSSSSCAACKLLKRRCTPTCIFAP---YFRSSDLITFAKVH--KVFGASNVSKLL 56 Query: 316 NAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 ++ R SL YEA R+ +P+YG +G + S Sbjct: 57 GEVPEEQ-RQETVNSLAYEAEVRLKDPVYGCIGAIAS 92
>LBD13_ARATH (Q9AT61) LOB domain protein 13| Length = 268 Score = 42.0 bits (97), Expect = 8e-04 Identities = 28/94 (29%), Positives = 45/94 (47%) Frame = +1 Query: 139 GPTPTMRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLIN 318 G T C C++LR+ C+E+C P + E A V K +G + + ++ Sbjct: 44 GTTLNTVTPCAACKLLRRRCAEECPFSP---YFSPHEPHKFAAVH--KVFGASNVSKML- 97 Query: 319 AGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 420 +S R SL+YEA R+ +PIYG +G + Sbjct: 98 LEVGESQRGDAANSLVYEANLRLRDPIYGCMGAI 131
>LBD15_ARATH (Q8L5T5) LOB domain protein 15| Length = 224 Score = 42.0 bits (97), Expect = 8e-04 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Frame = +1 Query: 139 GPTPTMRL--SCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNL 312 GP T+ C C++LR+ C+++C P + E A+V K +G + + + Sbjct: 35 GPPGTLNTITPCAACKLLRRRCAQECPFSP---YFSPHEPHKFASVH--KVFGASNVSKM 89 Query: 313 INAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 420 + +S R SL+YEA R+ +P+YG +G + Sbjct: 90 LME-VPESQRADAANSLVYEANVRLRDPVYGCMGAI 124
>LBD4_ARATH (Q9SHE9) LOB domain protein 4| Length = 172 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/87 (28%), Positives = 44/87 (50%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C++LR+ C++DC P + + E Q A V + +G + + ++ R Sbjct: 14 CAACKLLRRRCAQDCVFSP---YFPADEPQKFANVH--RVFGASNVNKMLQE-LPIHQRG 67 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLLWS 426 S++YEA R+ +P+YG VG + S Sbjct: 68 DAVSSMVYEANARVRDPVYGCVGAISS 94
>LBD24_ARATH (P59468) Putative LOB domain protein 24| Length = 121 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/85 (27%), Positives = 37/85 (43%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C +DC P P + + YG + ++ D R Sbjct: 6 CAACKYLRRRCPKDCVFSPYF-----PPNDPQKFACVHRIYGAGNVSKMLQQ-LPDQTRA 59 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL +EA R+ +P+YG VG++ Sbjct: 60 EAVESLCFEAKCRVDDPVYGCVGII 84
>LBD23_ARATH (P59467) Putative LOB domain protein 23| Length = 121 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/85 (27%), Positives = 37/85 (43%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C +DC P P + + YG + ++ D R Sbjct: 6 CAACKYLRRRCPKDCVFSPYF-----PPNDPQKFACVHRIYGAGNVSKMLQQ-LPDQTRA 59 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL +EA R+ +P+YG VG++ Sbjct: 60 EAVESLCFEAKCRVDDPVYGCVGII 84
>LBD3_ARATH (Q9SA51) LOB domain protein 3| Length = 165 Score = 41.2 bits (95), Expect = 0.001 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +1 Query: 166 CNGCRVLRKGCSED-CSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLR 342 C GC++LR+ C +D C P P + + K +G + + ++ +++ R Sbjct: 15 CAGCKLLRRKCVKDSCVFAPYF-----PAKEPYKFAIVHKIFGASNVNKMLQELSENH-R 68 Query: 343 PGIFRSLLYEACGRIVNPIYGSVGLLWS 426 S++YEA RI +P+YG VG + S Sbjct: 69 SDAVDSMVYEANARIQDPVYGCVGTISS 96
>LBD25_ARATH (Q8L8Q3) LOB domain protein 25| Length = 159 Score = 40.8 bits (94), Expect = 0.002 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 12/119 (10%) Frame = +1 Query: 100 TKRYSSSTYTLSQGP-TPTMRLS-----------CNGCRVLRKGCSEDCSIRPCLQWIKS 243 TK+ S + +GP T+ L C C+ LR+ C+ DC P Sbjct: 6 TKKIKPSQEVIKEGPFLVTIHLKGIYMSNYTNSPCAACKFLRRKCTSDCVFAPYF----- 60 Query: 244 PEAQANATVFLAKFYGRAGLMNLINAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 420 P + + + +G + + +++ R SL YEA R+ +P+YG VG + Sbjct: 61 PPEEPTKFANVHRIFGASNVSKILHEVAPHQ-REDAVNSLAYEAEARLKDPVYGCVGAI 118
>LBD12_ARATH (Q8LBW3) LOB domain protein 12| Length = 193 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/85 (25%), Positives = 40/85 (47%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C++LR+ C++DC P P + + K +G + + ++ R Sbjct: 9 CASCKLLRRRCAKDCIFAPYF-----PPDDPHKFAIVHKVFGASNVSKMLQE-LPVHQRA 62 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL++EA R+ +P+YG VG + Sbjct: 63 DAVNSLVFEANARVRDPVYGCVGAI 87
>LOB_ARATH (Q9FML4) Protein LATERAL ORGAN BOUNDARIES| Length = 186 Score = 40.0 bits (92), Expect = 0.003 Identities = 24/85 (28%), Positives = 37/85 (43%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C C P P + + + K +G + + L+N R Sbjct: 12 CAACKFLRRKCMPGCIFAPYF-----PPEEPHKFANVHKIFGASNVTKLLNELLPHQ-RE 65 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLL 420 SL YEA R+ +P+YG VG + Sbjct: 66 DAVNSLAYEAEARVRDPVYGCVGAI 90
>LBD31_ARATH (O81322) LOB domain protein 31| Length = 215 Score = 39.7 bits (91), Expect = 0.004 Identities = 26/87 (29%), Positives = 42/87 (48%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C DC P + S E ++ T + K +G + L+ S R Sbjct: 12 CGACKFLRRKCVADCVFAP---YFDSVEGTSHFTA-VHKVFGASNASKLLMM-IPASRRL 66 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLLWS 426 +L YEA R+ +P+YG VG +++ Sbjct: 67 DAVVTLTYEALARLRDPVYGCVGHIFA 93
>LBD16_ARATH (Q9SLB7) LOB domain protein 16| Length = 245 Score = 38.9 bits (89), Expect = 0.006 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Frame = +1 Query: 139 GPTPTMRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLI- 315 G T C C+ LR+ C+ DC P S E A + K +G + + L+ Sbjct: 7 GTTAGTGSPCGACKFLRRKCASDCIFAPYF----SSEQGAARFAAIHKVFGASNVSKLLL 62 Query: 316 NAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 N D + ++ YEA R+ +P+YG V +++ Sbjct: 63 NVPIHDRCEAVV--TIAYEAQARLHDPVYGCVSHIFA 97
>LBD19_ARATH (O22132) LOB domain protein 19| Length = 191 Score = 37.4 bits (85), Expect = 0.019 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLA--KFYGRAGLMNLINAGTDDSL 339 C C+ LR+ C + C P +A+ F A K +G + ++ L Sbjct: 17 CGACKFLRRKCVKGCVFAPYF------DAEQGTARFAAVHKVFGASNASKML-------L 63 Query: 340 RPGIFR------SLLYEACGRIVNPIYGSVGLLWS 426 R + + +L YEA RI +P+YGSVG L+S Sbjct: 64 RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFS 98
>LBD30_ARATH (O81323) LOB domain protein 30| Length = 228 Score = 37.0 bits (84), Expect = 0.025 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLA--KFYGRAGLMNLINAGTDDSL 339 C C+ LR+ C C P +++ A F A K +G + + L++ + Sbjct: 18 CGACKFLRRKCVAGCIFAPYF------DSEQGAAHFAAVHKVFGASNVSKLLHH-VPEHK 70 Query: 340 RPGIFRSLLYEACGRIVNPIYGSV 411 RP S+ +EA R+ +PIYG V Sbjct: 71 RPDAVVSICFEAQARLRDPIYGCV 94
>LBD28_ARATH (Q9SCS4) Putative LOB domain protein 28| Length = 198 Score = 35.4 bits (80), Expect = 0.072 Identities = 23/87 (26%), Positives = 42/87 (48%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C+EDC P K +A + K +G + + LIN+ R Sbjct: 13 CAACKHLRRKCTEDCVFAPYFPSTKLDNYEA-----VHKVFGASHVATLINS-LHPCQRE 66 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLLWS 426 +L +EA + +P+ G +G++++ Sbjct: 67 FAMDTLAWEAQVQANDPVNGCLGIIYN 93
>LBD33_ARATH (Q9LHS8) LOB domain protein 33| Length = 177 Score = 34.7 bits (78), Expect = 0.12 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Frame = +1 Query: 163 SCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGL-MNLINAGTDDSL 339 SC C+ LR+ C+ DC P + E ++ + K +G + + +L++ Sbjct: 7 SCGACKFLRRKCNRDCVFSPYFSY----EQASSHFAAVHKVFGASNVSKHLLHLPQHQRN 62 Query: 340 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 I ++ YEA R+ +P+YG V +++ Sbjct: 63 IAAI--TISYEALSRMRDPVYGCVAHIFA 89
>LBD29_ARATH (Q9M2J7) LOB domain protein 29| Length = 218 Score = 33.9 bits (76), Expect = 0.21 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLIN-AGTDDSLR 342 C C+ LR+ C++ C P E A+ + K +G + L++ D Sbjct: 12 CGACKFLRRKCAKGCVFAPYF----CHEQGASHFAAIHKVFGASNASKLLSHLPISDRCE 67 Query: 343 PGIFRSLLYEACGRIVNPIYGSVGLLWS 426 I ++ YEA R+ +PIYG V +++ Sbjct: 68 AAI--TISYEAQARLQDPIYGCVSHIFA 93
>LBD35_ARATH (Q9FFL3) Putative LOB domain protein 35| Length = 206 Score = 33.1 bits (74), Expect = 0.36 Identities = 21/84 (25%), Positives = 36/84 (42%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C+ C+V++ C+ +C P P L + +G + ++ A D R Sbjct: 6 CSACKVMKCDCAPNCIFAPHF-----PLTNLETFERLHRIFGAGNVFKIL-ANLDPIQRE 59 Query: 346 GIFRSLLYEACGRIVNPIYGSVGL 417 +L YEA +PI+G VG+ Sbjct: 60 TAVNALCYEAEALERDPIFGCVGI 83
>LBD20_ARATH (Q9SRV3) LOB domain protein 20| Length = 273 Score = 32.3 bits (72), Expect = 0.61 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Frame = +1 Query: 100 TKRYSSSTYTLSQGPTPTMRLS-CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFL 276 T SS +++ T T S C C+ LR+ C C P + A + Sbjct: 29 TSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHF----GSDQGAARFAAV 84 Query: 277 AKFYGRAGLMNLINAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 420 K +G + + L++ + + ++ YEA R+ +P+YG V + Sbjct: 85 HKVFGASNVSKLLHHIPVNRRHDAVV-TISYEAQARLSDPVYGCVSTI 131
>LBD18_ARATH (O22131) LOB domain protein 18| Length = 262 Score = 32.0 bits (71), Expect = 0.79 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLA--KFYGRAGLMNLINAGTDDSL 339 C C+ LR+ C C P +++ + F A K +G + + L+ Sbjct: 38 CGACKFLRRKCVPGCIFAPYF------DSEQGSAYFAAVHKVFGASNVSKLL-LHIPVHR 90 Query: 340 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 426 R ++ YEA RI +PIYG V +++ Sbjct: 91 RSDAVVTICYEAQARIRDPIYGCVAHIFA 119
>LBD17_ARATH (Q9SLB6) LOB domain protein 17| Length = 244 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/87 (25%), Positives = 38/87 (43%) Frame = +1 Query: 166 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 345 C C+ LR+ C + C P E A+ + + +G + L++ + R Sbjct: 8 CGACKFLRRRCVKGCVFAPYF----CHEQGASHFAAIHQVFGASNASKLLSHLPMEDRRE 63 Query: 346 GIFRSLLYEACGRIVNPIYGSVGLLWS 426 ++ YEA R +PIYG V ++S Sbjct: 64 AA-TTIYYEAQARRQDPIYGCVSHIFS 89
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 29.6 bits (65), Expect = 3.9 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 213 HPPLPAVDQEPRGAGQRHRLP 275 H P P +DQEP G RHR P Sbjct: 416 HLPAPRLDQEPPERGPRHRAP 436
>CO9_ONCMY (P06682) Complement component C9 (Fragment)| Length = 574 Score = 29.6 bits (65), Expect = 3.9 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Frame = +1 Query: 112 SSSTYTLSQGPTPTMRLSCNGCRVLRKGCSEDCS--IRPC 225 SS +T G +RLSCNG G EDC +PC Sbjct: 80 SSIEFTCESGACIKLRLSCNGDYDCEDGSDEDCEPVRKPC 119
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 29.3 bits (64), Expect = 5.1 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 213 HPPLPAVDQEPRGAGQRHR 269 H P+P D+EP G G RHR Sbjct: 413 HLPVPQPDREPAGRGSRHR 431
>FBIC_STRCO (Q9KZZ7) FO synthase (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) Length = 867 Score = 24.3 bits (51), Expect(2) = 6.3 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 308 FMSPARP*NLARKTVALACASGLL 237 FMSP ++ARK AL C L+ Sbjct: 113 FMSPDEVLDIARKGAALGCKEALI 136 Score = 23.1 bits (48), Expect(2) = 6.3 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -2 Query: 360 RAEDAGAEAVVRPGV 316 R DAG EA RPGV Sbjct: 60 RVRDAGLEAAGRPGV 74
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = +3 Query: 213 HPPLPAVDQEPRGAGQRHRLPRQVLRPRGAHEPHQRR 323 HPP P D + HR PR L P HQ R Sbjct: 72 HPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDHQHR 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,149,621 Number of Sequences: 219361 Number of extensions: 890684 Number of successful extensions: 3000 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2983 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
