ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59h09 |
|---|---|
| Clone Library Name | barley_pub |
>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC| 2.3.1.167) (DBAT) Length = 440 Score = 34.7 bits (78), Expect = 0.10 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = +2 Query: 215 FDTYISVIYAFHAPAPPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVE 394 F+T + + P V+ L + LV Y +AGRL +G + GA FVE Sbjct: 44 FNTLLVYNASDRVSVDPAKVIRQALSKVLVYYSPFAGRLRKKENGDLEVECTGEGALFVE 103 Query: 395 ATADVAL 415 A AD L Sbjct: 104 AMADTDL 110
>CD52_RAT (Q63064) CAMPATH-1 antigen precursor (Lymphocyte differentiation| antigen B7) (CD52 antigen) (CDw52) Length = 96 Score = 32.3 bits (72), Expect = 0.50 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = -3 Query: 306 STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVH--PGATPQAPYSGL 133 +++A+ +PA++ A A KA ++T + TT+AV PG P+A S + Sbjct: 26 NSTAVTTPANKAATTAAATTKA-----------AATTATKTTTAVRKTPGKPPKAGASSI 74 Query: 132 TALDECTVIFMS 97 T + CT +F + Sbjct: 75 TDVGACTFLFFA 86
>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC| 2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase) (DBBT) Length = 440 Score = 32.0 bits (71), Expect = 0.65 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +2 Query: 257 APPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATAD 406 A P + L + LV Y +AGRL +G + GA FVEA AD Sbjct: 54 ADPAKTIREALSKVLVYYPPFAGRLRNTENGDLEVECTGEGAVFVEAMAD 103
>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 32.0 bits (71), Expect = 0.65 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 257 APPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATAD 406 A P ++ L + LV Y +AGRL +G + GA F+EA AD Sbjct: 60 ADPAKLIREALAKILVYYPPFAGRLRETENGDLEVECTGEGAMFLEAMAD 109
>TID_DROME (Q27237) Protein tumorous imaginal discs, mitochondrial precursor| (Protein lethal(2)tumorous imaginal discs) (TID56) (TID50) Length = 520 Score = 31.6 bits (70), Expect = 0.85 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -2 Query: 430 RHDAVERHVGRRLHEPGAGVVEQDRAAAAGVDAEPPGP 317 R D ++ EPGAG + AAAAG A PGP Sbjct: 437 RKDGSKQATAGASEEPGAGAAAKASAAAAGSGASKPGP 474
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 31.2 bits (69), Expect = 1.1 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 8/93 (8%) Frame = -3 Query: 381 APASLSRIARPP--------LASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEM 226 APA + A PP LA P PA + A+P PA+ G AGA A Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA----- 314 Query: 225 YVSKLALSSTVSGTTSAVHPGATPQAPYSGLTA 127 + +G + PGA AP G+ A Sbjct: 315 ---PAPAAGGPAGVSGQPGPGAAAAAPAPGVKA 344
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +2 Query: 257 APPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATAD 406 A P + L + LV Y +AGRL +G + GA F+EA AD Sbjct: 60 ADPAKPIREALAKILVYYPPFAGRLRETENGDLEVECTGEGAMFLEAMAD 109
>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate| regulatory protein algR3) Length = 352 Score = 30.0 bits (66), Expect = 2.5 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = -3 Query: 378 PASLSRIARP---PLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLA 208 PA+ + A+P P A ++PA + SA PA++ A A A V+ Sbjct: 249 PAAKTAAAKPAAKPAAKPAAKPAAKPVAKSAAAKPAAKPAAKPAAKPAAKPAAKPVAAKP 308 Query: 207 LSSTVSGTTSAVHPGATPQAPYSGLTA 127 ++T T A P ATP AP + +A Sbjct: 309 -AATKPATAPAAKPAATPSAPAAASSA 334
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 30.0 bits (66), Expect = 2.5 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +2 Query: 185 VPLTVLDKANFDTYI-SVIYAFHAP----APPNAVLEAGLGRALVDYREWAGRLGVDASG 349 V L+V+D I + + F+AP A P ++ L + LV Y AGRL G Sbjct: 30 VQLSVVDSLTICRGIFNTLLVFNAPDNISADPVKIIREALSKVLVYYFPLAGRLRSKEIG 89 Query: 350 GRAILLNDAGARFVEATAD 406 + GA FVEA + Sbjct: 90 ELEVECTGDGALFVEAMVE 108
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -3 Query: 378 PASLSRIARPPLASTPSRPAHSR*STSALPSPAS 277 P L A PP A P+ PA R S + LP+PA+ Sbjct: 32 PPHLRNRAAPPAAVPPAAPAAYRPSPTGLPTPAT 65
>MOXJ_METEX (P16028) Protein moxJ precursor| Length = 300 Score = 29.3 bits (64), Expect = 4.2 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = +2 Query: 56 ARCGPASFLRTFAIDMKITVHSSKAVKPEYGACGVAPGCTADVVPLTVLDKANFDTYISV 235 A C PA A D K T +++A KP+ G V C A+ PL++ D + + I+ Sbjct: 26 ALCAPAQ-----AQDTKATSKAAEAAKPDAGTLRV---CAAEQPPLSMKDGSGLENRIAT 77 Query: 236 IYA 244 A Sbjct: 78 TVA 80
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 29.3 bits (64), Expect = 4.2 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = -3 Query: 306 STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVHPGATPQAPYSGLTA 127 + +A P A+ TA A A Y+S AL+S T +A HPG PQ + A Sbjct: 650 TAAAAPQSAAATAAAAAAASH----HHYLSSPALASPAGSTNNASHPG-NPQ-----IAA 699 Query: 126 LDECTVIFMS 97 C+ +F++ Sbjct: 700 NAPCSTLFVA 709
>COAT_CNV (P15183) Coat protein| Length = 380 Score = 29.3 bits (64), Expect = 4.2 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -3 Query: 351 PPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAV 172 P L S A S + LP + A W+A + YV + +STV G T ++ Sbjct: 262 PLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSI 321 Query: 171 HPGATPQAPYSGLTA 127 G T + +S TA Sbjct: 322 SGGGTINSSFSVSTA 336
>ANK1_HUMAN (P16157) Ankyrin-1 (Erythrocyte ankyrin) (Ankyrin-R)| Length = 1880 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -2 Query: 424 DAVERHVGRRLHEPGAGVVEQDRAAAAGVDAEPPGPLAVVHQR 296 D +E+ G+R E G QD A AG D+E L HQR Sbjct: 1635 DLLEQEEGQRSEEKLPGSKRQDDATGAGQDSENEVSLVSGHQR 1677
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 11/47 (23%) Frame = +2 Query: 254 PAPPNAVLEAGLGRAL-----------VDYREWAGRLGVDASGGRAI 361 PAP A +EAG A VD+ ++AG + VDA+ GRA+ Sbjct: 69 PAPVAAAVEAGRKEADRVEALPGHPRGVDFAQYAGYVTVDAAAGRAL 115
>ATS12_HUMAN (P58397) ADAMTS-12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 12) (ADAM-TS 12) (ADAM-TS12) Length = 1593 Score = 28.9 bits (63), Expect = 5.5 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = -3 Query: 357 ARPPLASTPSRPAHSR*STSALPSPASRTA-----LGGAGAWKA*ITEMYVSKLALSSTV 193 +RP + +TP+ P ST A+ SP+ TA LGG W+ T+ +S L ST Sbjct: 1026 SRPRMLTTPTGPESMSTSTPAISSPSPTTASKEGDLGGK-QWQDSSTQPELSSRYLIST- 1083 Query: 192 SGTTS 178 G+TS Sbjct: 1084 -GSTS 1087
>PPCK_HAECO (P29190) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)| (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 619 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 128 AVKPEYGACGVAPGCTADVVPLTV 199 A+ PEYG GVAPG + P+ V Sbjct: 320 AINPEYGFFGVAPGTSKKTNPMAV 343
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 28.9 bits (63), Expect = 5.5 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = +2 Query: 266 NAVLEAGLGRALVDYREWAGRLGVDASGGR-AILLNDAGARFVEATADVALD 418 N ++EA L +ALV Y AGRL + +G R I N GA FVEA + L+ Sbjct: 65 NILIEA-LSKALVPYYPMAGRLKI--NGDRYEIDCNGEGALFVEAESSHVLE 113
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 28.5 bits (62), Expect = 7.2 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = +2 Query: 266 NAVLEAGLGRALVDYREWAGRLGVDASGGR-AILLNDAGARFVEATADVALD 418 N ++EA L +ALV Y AGRL + +G R I N GA FVEA + L+ Sbjct: 65 NILIEA-LSKALVPYYPMAGRLKI--NGDRYEIDCNAEGALFVEAESSHVLE 113
>TCOF_MOUSE (O08784) Treacle protein (Treacher Collins syndrome protein| homolog) Length = 1320 Score = 28.5 bits (62), Expect = 7.2 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 7/128 (5%) Frame = -3 Query: 381 APASLSRIARPPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLALS 202 APA+ + A+P L + SA + S GA A ++ ++K Sbjct: 543 APAASAAQAKPALEKQMKASSRKGTPASATGASTSSHCKAGAVTSSASLSSPALAKGTQR 602 Query: 201 STVSGTTSAVHPGATPQAP----YSGLTALDECTVIFMSMANVRKNEAGPQ---RARQLS 43 S V ++ + GA P P SG L + +A V + GP A++ S Sbjct: 603 SDVDSSSESESEGAAPSTPRVQGKSGGKGLQGKAALGQGVAPVHTQKTGPSVKAMAQEDS 662 Query: 42 WCYKQDSS 19 ++DSS Sbjct: 663 ESLEEDSS 670
>ILVD_GLUOX (Q5FN26) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 618 Score = 28.5 bits (62), Expect = 7.2 Identities = 22/55 (40%), Positives = 26/55 (47%) Frame = -3 Query: 333 PSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVH 169 P+R H S S + R GA AWK E VSK AL + + TTSA H Sbjct: 551 PNRTLHLAVSDSDIADRRERMNARGASAWKP-NRERVVSK-ALQAYAAMTTSAAH 603
>BRO1_DEBHA (Q6BRL3) Vacuolar protein-sorting protein BRO1 (BRO domain-containing| protein 1) Length = 970 Score = 28.5 bits (62), Expect = 7.2 Identities = 25/88 (28%), Positives = 34/88 (38%) Frame = -3 Query: 387 NRAPASLSRIARPPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLA 208 N +P S SR PP A P RP++S T P A T + Sbjct: 883 NESPGSYSR---PPPALPPKRPSYSAQPTPHAPPQAPYTQF----------------QPQ 923 Query: 207 LSSTVSGTTSAVHPGATPQAPYSGLTAL 124 S+ ++S+ +P PQ P SG L Sbjct: 924 ASNYTDNSSSSANPTNLPQHPDSGTNDL 951
>DMI1_MEDTR (Q6RHR6) Putative ion channel DMI-1 (Does not make infections| protein 1) Length = 882 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -3 Query: 387 NRAPASLSRIARPPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEM---YVS 217 N ++L+ + +PPL T + P+ + + P+P +GG K +E Y S Sbjct: 5 NEESSNLNVMNKPPLKKTKTLPSLNLRVSVTPPNPNDNNGIGGTSTTKTDFSEQQWNYPS 64 Query: 216 KLALSST 196 L + ST Sbjct: 65 FLGIGST 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,525,915 Number of Sequences: 219361 Number of extensions: 755131 Number of successful extensions: 2984 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2894 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2983 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
