ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475910.1| Oryza sativa (japonica cultivar-group), predic... 194 2e-46
2dbj|AK106699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
3gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 141 2e-30
4gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 141 2e-30
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
6gb|U43495.1|HVU43495 Hordeum vulgare jasmonate-induced mRNA, par... 137 3e-29
7ref|NM_192393.1| Oryza sativa (japonica cultivar-group), predic... 70 6e-09
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
9dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
10ref|NM_192374.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
11dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
12ref|XM_507516.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
13ref|XM_467098.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
14ref|XM_507515.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
15ref|XM_506889.2| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
17dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
18dbj|AK106154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
19dbj|AK104793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
20dbj|AK098925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
21dbj|AK064950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
22emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 52 0.002
23ref|XM_475909.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
24ref|NM_191700.1| Oryza sativa (japonica cultivar-group), predic... 44 0.37
25gb|BC058054.1| Danio rerio hypothetical protein LOC402860, mRNA ... 44 0.37
26gb|BC096809.1| Danio rerio im:7152114, mRNA (cDNA clone MGC:1104... 44 0.37
27ref|NM_001030074.1| Danio rerio im:7152114 (im:7152114), mRNA 44 0.37
28dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
29dbj|AK106129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
30dbj|AK104373.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
31dbj|AK098952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
32dbj|AK069577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
33emb|CR933839.10| Zebrafish DNA sequence from clone DKEY-244A7 in... 44 0.37
34ref|XM_824200.1| Trypanosoma brucei TREU927 protein kinase (Tb11... 42 1.5
35emb|AL022149.2|HS122K23 Human DNA sequence from clone RP1-122K23... 42 1.5
36ref|XM_233854.3| PREDICTED: Rattus norvegicus similar to glycera... 42 1.5
37gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.8
38ref|NM_197755.1| Oryza sativa (japonica cultivar-group) putative... 40 5.8
39gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.8
40ref|XM_598032.2| PREDICTED: Bos taurus hypothetical LOC519807 (L... 40 5.8
41ref|XM_545652.2| PREDICTED: Canis familiaris hypothetical LOC488... 40 5.8
42emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chr... 40 5.8
43emb|AL355816.14| Human DNA sequence from clone RP5-1180E21 on ch... 40 5.8
44gb|DQ397593.2| Cenarchaeum symbiosum clone C03B12, complete sequ... 40 5.8
45gb|DQ397567.1| Cenarchaeum symbiosum clone C07B06, complete sequ... 40 5.8
46gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 40 5.8
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
51emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 40 5.8
52emb|CT030186.13| Mouse DNA sequence from clone RP23-80I4 on chro... 40 5.8 
>ref|XM_475910.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score =  194 bits (98), Expect = 2e-46
 Identities = 263/318 (82%)
 Strand = Plus / Plus

                                                                       
Query: 89  gcgcgacatcgtcgtggcgtggcgcggcaccgtccagaacatggagtgggtcaacgacct 148
           |||||||||||||||||||||||||||||| ||  ||| | ||||||||||||||||| |
Sbjct: 411 gcgcgacatcgtcgtggcgtggcgcggcacggtggagagcctggagtgggtcaacgactt 470

                                                                       
Query: 149 cgacttcgttcccgtgcccgccgcgcccgtgctgggctccgcggccagccagaaccgcct 208
           |||||||   || |||||||||||||| ||||||||| |||| |||  |  |||||  | 
Sbjct: 471 cgacttcacgccggtgcccgccgcgccggtgctgggcgccgccgccgccgcgaacccgcg 530

                                                                       
Query: 209 cgccgtcgtgcaccatgggttcctctccatgtacacgtcaagcaacaagagctccgagtt 268
           |||| |||||||||  || ||||| ||| |||||||||| |||||||||  |||| ||| 
Sbjct: 531 cgccatcgtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagta 590

                                                                       
Query: 269 caccaagaccagcgccagagatcaggtcgtcaaggaggtgaagaggctggtggagctgta 328
           || |||| ||||||||||||| |||||  |  |||| |||| ||||||| ||||| ||||
Sbjct: 591 caacaaggccagcgccagagaccaggttcttgaggaagtgaggaggctgatggagttgta 650

                                                                       
Query: 329 caaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcgcgtcgatcgccac 388
           ||||||||||| |   |||||||||||   ||| |||||||| ||||||||| | || ||
Sbjct: 651 caaggacgaggtgacgagcatcaccgtcgtcgggcacagcctgggcgcgtcgctggcgac 710

                             
Query: 389 cctgaacgccgttgacat 406
           |||||||||||| |||||
Sbjct: 711 cctgaacgccgtcgacat 728
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>dbj|AK106699.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E01, full
           insert sequence
          Length = 1526

 Score =  194 bits (98), Expect = 2e-46
 Identities = 263/318 (82%)
 Strand = Plus / Plus

                                                                       
Query: 89  gcgcgacatcgtcgtggcgtggcgcggcaccgtccagaacatggagtgggtcaacgacct 148
           |||||||||||||||||||||||||||||| ||  ||| | ||||||||||||||||| |
Sbjct: 495 gcgcgacatcgtcgtggcgtggcgcggcacggtggagagcctggagtgggtcaacgactt 554

                                                                       
Query: 149 cgacttcgttcccgtgcccgccgcgcccgtgctgggctccgcggccagccagaaccgcct 208
           |||||||   || |||||||||||||| ||||||||| |||| |||  |  |||||  | 
Sbjct: 555 cgacttcacgccggtgcccgccgcgccggtgctgggcgccgccgccgccgcgaacccgcg 614

                                                                       
Query: 209 cgccgtcgtgcaccatgggttcctctccatgtacacgtcaagcaacaagagctccgagtt 268
           |||| |||||||||  || ||||| ||| |||||||||| |||||||||  |||| ||| 
Sbjct: 615 cgccatcgtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagta 674

                                                                       
Query: 269 caccaagaccagcgccagagatcaggtcgtcaaggaggtgaagaggctggtggagctgta 328
           || |||| ||||||||||||| |||||  |  |||| |||| ||||||| ||||| ||||
Sbjct: 675 caacaaggccagcgccagagaccaggttcttgaggaagtgaggaggctgatggagttgta 734

                                                                       
Query: 329 caaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcgcgtcgatcgccac 388
           ||||||||||| |   |||||||||||   ||| |||||||| ||||||||| | || ||
Sbjct: 735 caaggacgaggtgtcgagcatcaccgtcgtcgggcacagcctgggcgcgtcgctggcgac 794

                             
Query: 389 cctgaacgccgttgacat 406
           |||||||||||| |||||
Sbjct: 795 cctgaacgccgtcgacat 812
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score =  141 bits (71), Expect = 2e-30
 Identities = 173/207 (83%)
 Strand = Plus / Minus

                                                                          
Query: 89     gcgcgacatcgtcgtggcgtggcgcggcaccgtccagaacatggagtgggtcaacgacct 148
              |||||||||||||||||||||||||||||| ||  ||| | ||||||||||||||||| |
Sbjct: 166688 gcgcgacatcgtcgtggcgtggcgcggcacggtggagagcctggagtgggtcaacgactt 166629

                                                                          
Query: 149    cgacttcgttcccgtgcccgccgcgcccgtgctgggctccgcggccagccagaaccgcct 208
              |||||||   || |||||||||||||| ||||||||| |||| |||  |  |||||  | 
Sbjct: 166628 cgacttcacgccggtgcccgccgcgccggtgctgggcgccgccgccgccgcgaacccgcg 166569

                                                                          
Query: 209    cgccgtcgtgcaccatgggttcctctccatgtacacgtcaagcaacaagagctccgagtt 268
              |||| |||||||||  || ||||| ||| |||||||||| |||||||||  |||| ||| 
Sbjct: 166568 cgccatcgtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagta 166509

                                         
Query: 269    caccaagaccagcgccagagatcaggt 295
              || |||| ||||||||||||| |||||
Sbjct: 166508 caacaaggccagcgccagagaccaggt 166482



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                          
Query: 301    aggaggtgaagaggctggtggagctgtacaaggacgaggaggtcagcatcaccgtgtgcg 360
              |||| |||| ||||||| ||||| ||||||||||||||| |   |||||||||||   ||
Sbjct: 163668 aggaagtgaggaggctgatggagttgtacaaggacgaggtgacgagcatcaccgtcgtcg 163609

                                                            
Query: 361    gccacagcctcggcgcgtcgatcgccaccctgaacgccgttgacat 406
              | |||||||| ||||||||| | || |||||||||||||| |||||
Sbjct: 163608 ggcacagcctgggcgcgtcgctggcgaccctgaacgccgtcgacat 163563



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 90     cgcgacatcgtcgtggcgtggcgcggcac 118
              |||||||||||||| ||||||||||||||
Sbjct: 161900 cgcgacatcgtcgtcgcgtggcgcggcac 161928
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>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score =  141 bits (71), Expect = 2e-30
 Identities = 173/207 (83%)
 Strand = Plus / Minus

                                                                         
Query: 89    gcgcgacatcgtcgtggcgtggcgcggcaccgtccagaacatggagtgggtcaacgacct 148
             |||||||||||||||||||||||||||||| ||  ||| | ||||||||||||||||| |
Sbjct: 17370 gcgcgacatcgtcgtggcgtggcgcggcacggtggagagcctggagtgggtcaacgactt 17311

                                                                         
Query: 149   cgacttcgttcccgtgcccgccgcgcccgtgctgggctccgcggccagccagaaccgcct 208
             |||||||   || |||||||||||||| ||||||||| |||| |||  |  |||||  | 
Sbjct: 17310 cgacttcacgccggtgcccgccgcgccggtgctgggcgccgccgccgccgcgaacccgcg 17251

                                                                         
Query: 209   cgccgtcgtgcaccatgggttcctctccatgtacacgtcaagcaacaagagctccgagtt 268
             |||| |||||||||  || ||||| ||| |||||||||| |||||||||  |||| ||| 
Sbjct: 17250 cgccatcgtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagta 17191

                                        
Query: 269   caccaagaccagcgccagagatcaggt 295
             || |||| ||||||||||||| |||||
Sbjct: 17190 caacaaggccagcgccagagaccaggt 17164



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                         
Query: 301   aggaggtgaagaggctggtggagctgtacaaggacgaggaggtcagcatcaccgtgtgcg 360
             |||| |||| ||||||| ||||| ||||||||||||||| |   |||||||||||   ||
Sbjct: 14350 aggaagtgaggaggctgatggagttgtacaaggacgaggtgacgagcatcaccgtcgtcg 14291

                                                           
Query: 361   gccacagcctcggcgcgtcgatcgccaccctgaacgccgttgacat 406
             | |||||||| ||||||||| | || |||||||||||||| |||||
Sbjct: 14290 ggcacagcctgggcgcgtcgctggcgaccctgaacgccgtcgacat 14245



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 90    cgcgacatcgtcgtggcgtggcgcggcac 118
             |||||||||||||| ||||||||||||||
Sbjct: 12582 cgcgacatcgtcgtcgcgtggcgcggcac 12610
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  141 bits (71), Expect = 2e-30
 Identities = 173/207 (83%)
 Strand = Plus / Minus

                                                                            
Query: 89       gcgcgacatcgtcgtggcgtggcgcggcaccgtccagaacatggagtgggtcaacgacct 148
                |||||||||||||||||||||||||||||| ||  ||| | ||||||||||||||||| |
Sbjct: 28382446 gcgcgacatcgtcgtggcgtggcgcggcacggtggagagcctggagtgggtcaacgactt 28382387

                                                                            
Query: 149      cgacttcgttcccgtgcccgccgcgcccgtgctgggctccgcggccagccagaaccgcct 208
                |||||||   || |||||||||||||| ||||||||| |||| |||  |  |||||  | 
Sbjct: 28382386 cgacttcacgccggtgcccgccgcgccggtgctgggcgccgccgccgccgcgaacccgcg 28382327

                                                                            
Query: 209      cgccgtcgtgcaccatgggttcctctccatgtacacgtcaagcaacaagagctccgagtt 268
                |||| |||||||||  || ||||| ||| |||||||||| |||||||||  |||| ||| 
Sbjct: 28382326 cgccatcgtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagta 28382267

                                           
Query: 269      caccaagaccagcgccagagatcaggt 295
                || |||| ||||||||||||| |||||
Sbjct: 28382266 caacaaggccagcgccagagaccaggt 28382240



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                            
Query: 301      aggaggtgaagaggctggtggagctgtacaaggacgaggaggtcagcatcaccgtgtgcg 360
                |||| |||| ||||||| ||||| ||||||||||||||| |   |||||||||||   ||
Sbjct: 28379426 aggaagtgaggaggctgatggagttgtacaaggacgaggtgacgagcatcaccgtcgtcg 28379367

                                                              
Query: 361      gccacagcctcggcgcgtcgatcgccaccctgaacgccgttgacat 406
                | |||||||| ||||||||| | || |||||||||||||| |||||
Sbjct: 28379366 ggcacagcctgggcgcgtcgctggcgaccctgaacgccgtcgacat 28379321



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 90       cgcgacatcgtcgtggcgtggcgcggcac 118
                |||||||||||||| ||||||||||||||
Sbjct: 28377658 cgcgacatcgtcgtcgcgtggcgcggcac 28377686
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>gb|U43495.1|HVU43495 Hordeum vulgare jasmonate-induced mRNA, partial 3' sequence
          Length = 779

 Score =  137 bits (69), Expect = 3e-29
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                       
Query: 361 gccacagcctcggcgcgtcgatcgccaccctgaacgccgttgacatggtgtctagcggca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  gccacagcctcggcgcgtcgatcgccaccctgaacgccgttgacatggtgtctagcggca 89

                    
Query: 421 tcaacaagc 429
           |||||||||
Sbjct: 90  tcaacaagc 98
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>ref|NM_192393.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1458

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 105 gcgtggcgcggcaccgtccagaacatggagtgggtcaacgacctcgacttc 155
           ||||||||||||||||||| |  |||||||||| |||||||||||||||||
Sbjct: 403 gcgtggcgcggcaccgtccggcccatggagtggctcaacgacctcgacttc 453



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 326 gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcgg 373
           ||||||||||||||||  ||||||||||||   |||||| ||||||||
Sbjct: 888 gtacaaggacgaggagaccagcatcaccgtcgtcggccatagcctcgg 935
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 105      gcgtggcgcggcaccgtccagaacatggagtgggtcaacgacctcgacttc 155
                ||||||||||||||||||| |  |||||||||| |||||||||||||||||
Sbjct: 26379766 gcgtggcgcggcaccgtccggcccatggagtggctcaacgacctcgacttc 26379716



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                            
Query: 327      tacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcgcgtcgatcgcc 386
                |||||||||||||||  ||||||||||||   |||||||||||| |||||  |  | |||
Sbjct: 26295576 tacaaggacgaggagaccagcatcaccgtcatcggccacagcctgggcgccaccctggcc 26295635

                             
Query: 387      accctgaacgccg 399
                |||||||||||||
Sbjct: 26295636 accctgaacgccg 26295648



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 89       gcgcgacatcgtcgtggcgtggcgcggcac 118
                |||||||||||| |||||||||||||||||
Sbjct: 26293826 gcgcgacatcgtggtggcgtggcgcggcac 26293855



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 326      gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcgg 373
                ||||||||||||||||  ||||||||||||   |||||| ||||||||
Sbjct: 26377581 gtacaaggacgaggagaccagcatcaccgtcgtcggccatagcctcgg 26377534



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 363      cacagcctcggcgcgtcgatcgccac 388
                |||||||||||||||||| |||||||
Sbjct: 29525221 cacagcctcggcgcgtcgctcgccac 29525196
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>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 105   gcgtggcgcggcaccgtccagaacatggagtgggtcaacgacctcgacttc 155
             ||||||||||||||||||| |  |||||||||| |||||||||||||||||
Sbjct: 53631 gcgtggcgcggcaccgtccggcccatggagtggctcaacgacctcgacttc 53581



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 326   gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcgg 373
             ||||||||||||||||  ||||||||||||   |||||| ||||||||
Sbjct: 51446 gtacaaggacgaggagaccagcatcaccgtcgtcggccatagcctcgg 51399
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>ref|NM_192374.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1212

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 327 tacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcgcgtcgatcgcc 386
           |||||||||||||||  ||||||||||||   |||||||||||| |||||  |  | |||
Sbjct: 613 tacaaggacgaggagaccagcatcaccgtcatcggccacagcctgggcgccaccctggcc 672

                        
Query: 387 accctgaacgccg 399
           |||||||||||||
Sbjct: 673 accctgaacgccg 685



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 89  gcgcgacatcgtcgtggcgtggcgcggcac 118
           |||||||||||| |||||||||||||||||
Sbjct: 375 gcgcgacatcgtggtggcgtggcgcggcac 404
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>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1159_D09
          Length = 147770

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                          
Query: 327    tacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcgcgtcgatcgcc 386
              |||||||||||||||  ||||||||||||   |||||||||||| |||||  |  | |||
Sbjct: 108257 tacaaggacgaggagaccagcatcaccgtcatcggccacagcctgggcgccaccctggcc 108316

                           
Query: 387    accctgaacgccg 399
              |||||||||||||
Sbjct: 108317 accctgaacgccg 108329



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 89     gcgcgacatcgtcgtggcgtggcgcggcac 118
              |||||||||||| |||||||||||||||||
Sbjct: 106507 gcgcgacatcgtggtggcgtggcgcggcac 106536
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>ref|XM_507516.1| PREDICTED Oryza sativa (japonica cultivar-group), P0491E01.40 mRNA
          Length = 1910

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1166 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
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>ref|XM_467098.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1910

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1166 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
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>ref|XM_507515.1| PREDICTED Oryza sativa (japonica cultivar-group), P0491E01.40 mRNA
          Length = 1933

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1167 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1216
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>ref|XM_506889.2| PREDICTED Oryza sativa (japonica cultivar-group), P0491E01.40 mRNA
          Length = 1964

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1167 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1216
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 326      gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
                |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 26399304 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 26399353
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:P0491E01
          Length = 136150

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 326    gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
              |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 131656 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 131705
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>dbj|AK106154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A03, full
            insert sequence
          Length = 1910

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1166 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
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>dbj|AK104793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F10, full
            insert sequence
          Length = 1910

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1166 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
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>dbj|AK098925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P22, full
            insert sequence
          Length = 1934

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1167 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1216
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>dbj|AK064950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P22, full
            insert sequence
          Length = 1964

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 326  gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
            |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 1166 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 326    gtacaaggacgaggaggtcagcatcaccgtgtgcggccacagcctcggcg 375
              |||||||| ||||||| |||||||||| ||   |||||||||||||||||
Sbjct: 121321 gtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 121370
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>ref|XM_475909.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1236

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 90  cgcgacatcgtcgtggcgtggcgcggcac 118
           |||||||||||||| ||||||||||||||
Sbjct: 409 cgcgacatcgtcgtcgcgtggcgcggcac 437
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>ref|NM_191700.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1371

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 363 cacagcctcggcgcgtcgatcgccac 388
           |||||||||||||||||| |||||||
Sbjct: 694 cacagcctcggcgcgtcgctcgccac 719
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>gb|BC058054.1| Danio rerio hypothetical protein LOC402860, mRNA (cDNA clone
           IMAGE:3815424), partial cds
          Length = 4004

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 389 cctgaacgccgttgacatggtg 410
           ||||||||||||||||||||||
Sbjct: 44  cctgaacgccgttgacatggtg 23
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>gb|BC096809.1| Danio rerio im:7152114, mRNA (cDNA clone MGC:110418 IMAGE:7222736),
           complete cds
          Length = 1629

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 389 cctgaacgccgttgacatggtg 410
           ||||||||||||||||||||||
Sbjct: 39  cctgaacgccgttgacatggtg 18
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>ref|NM_001030074.1| Danio rerio im:7152114 (im:7152114), mRNA
          Length = 1629

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 389 cctgaacgccgttgacatggtg 410
           ||||||||||||||||||||||
Sbjct: 39  cctgaacgccgttgacatggtg 18
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>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456F08
          Length = 156850

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 363   cacagcctcggcgcgtcgatcgccac 388
             |||||||||||||||||| |||||||
Sbjct: 91495 cacagcctcggcgcgtcgctcgccac 91470
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>dbj|AK106129.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F09, full
           insert sequence
          Length = 1810

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 363 cacagcctcggcgcgtcgatcgccac 388
           |||||||||||||||||| |||||||
Sbjct: 802 cacagcctcggcgcgtcgctcgccac 827
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>dbj|AK104373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F02, full
           insert sequence
          Length = 1810

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 363 cacagcctcggcgcgtcgatcgccac 388
           |||||||||||||||||| |||||||
Sbjct: 802 cacagcctcggcgcgtcgctcgccac 827
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>dbj|AK098952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055J12, full
           insert sequence
          Length = 1805

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 363 cacagcctcggcgcgtcgatcgccac 388
           |||||||||||||||||| |||||||
Sbjct: 801 cacagcctcggcgcgtcgctcgccac 826
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>dbj|AK069577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022J10, full
           insert sequence
          Length = 1921

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 363 cacagcctcggcgcgtcgatcgccac 388
           |||||||||||||||||| |||||||
Sbjct: 802 cacagcctcggcgcgtcgctcgccac 827
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>emb|CR933839.10| Zebrafish DNA sequence from clone DKEY-244A7 in linkage group 18,
            complete sequence
          Length = 88900

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 389  cctgaacgccgttgacatggtg 410
            ||||||||||||||||||||||
Sbjct: 5789 cctgaacgccgttgacatggtg 5810
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>ref|XM_824200.1| Trypanosoma brucei TREU927 protein kinase (Tb11.01.4130) partial
           mRNA
          Length = 2310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 199 agaaccgcctcgccgtcgtgc 219
           |||||||||||||||||||||
Sbjct: 511 agaaccgcctcgccgtcgtgc 491
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>emb|AL022149.2|HS122K23 Human DNA sequence from clone RP1-122K23 on chromosome Xq21.21-22.1,
              complete sequence
          Length = 122777

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    gcaccatgggttcctctccat 238
              |||||||||||||||||||||
Sbjct: 115665 gcaccatgggttcctctccat 115645
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>ref|XM_233854.3| PREDICTED: Rattus norvegicus similar to glyceraldehyde-3-phosphate
           dehydrogenase, spermatogenic (LOC298793), mRNA
          Length = 2106

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 310 agaggctggtggagctgtacaagga 334
           ||||||||||||||||| |||||||
Sbjct: 599 agaggctggtggagctgaacaagga 623
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     ccgtgcccgccgcgcccgtg 179
               ||||||||||||||||||||
Sbjct: 1061515 ccgtgcccgccgcgcccgtg 1061496
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>ref|NM_197755.1| Oryza sativa (japonica cultivar-group) putative lipase
            (OSJNBb0089A17.13), mRNA
          Length = 1605

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 363  cacagcctcggcgcgtcgatcgcc 386
            |||||||||||||||||| |||||
Sbjct: 1030 cacagcctcggcgcgtcgctcgcc 1053
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     ggtcaacgacctcgacttcg 156
               ||||||||||||||||||||
Sbjct: 2446479 ggtcaacgacctcgacttcg 2446498
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>ref|XM_598032.2| PREDICTED: Bos taurus hypothetical LOC519807 (LOC519807), mRNA
          Length = 5871

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  aggtgaagaggctggtggag 323
            ||||||||||||||||||||
Sbjct: 2761 aggtgaagaggctggtggag 2742
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>ref|XM_545652.2| PREDICTED: Canis familiaris hypothetical LOC488532 (LOC488532), mRNA
          Length = 5694

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  aggtgaagaggctggtggag 323
            ||||||||||||||||||||
Sbjct: 2452 aggtgaagaggctggtggag 2433
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>emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chromosome 1 Contains the
             5' end of the gene for nucleolar GTPase (HUMAUANTIG), the
             gene for a novel protein (FLJ40906) and a CpG island,
             complete sequence
          Length = 94638

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   gtgctgggctccgcggccagccag 200
             |||||||||||| |||||||||||
Sbjct: 73982 gtgctgggctccacggccagccag 74005
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>emb|AL355816.14| Human DNA sequence from clone RP5-1180E21 on chromosome 1 Contains a
             gene for a novel protein (DKFZp313E1815), a gene for
             choline/ethanolaminephosphotransferase (CEPT1), a gene
             (FLJ22457) for a novel protein, the 5' end of a novel
             transcript (DKFZp313J1722) and a CpG island, complete
             sequence
          Length = 141686

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   caccatgggttcctctccat 238
             ||||||||||||||||||||
Sbjct: 21994 caccatgggttcctctccat 21975
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>gb|DQ397593.2| Cenarchaeum symbiosum clone C03B12, complete sequence
          Length = 38618

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ggagctgtacaaggacgagg 339
             ||||||||||||||||||||
Sbjct: 20402 ggagctgtacaaggacgagg 20421
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>gb|DQ397567.1| Cenarchaeum symbiosum clone C07B06, complete sequence
          Length = 41363

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   ggagctgtacaaggacgagg 339
             ||||||||||||||||||||
Sbjct: 39406 ggagctgtacaaggacgagg 39387
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>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
             sequence
          Length = 132927

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 363   cacagcctcggcgcgtcgatcgcc 386
             |||||||||||||||||| |||||
Sbjct: 94142 cacagcctcggcgcgtcgctcgcc 94165
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 291      caggtcgtcaaggaggtgaagaggctgg 318
                ||||||||| ||||||||||| ||||||
Sbjct: 26068211 caggtcgtcgaggaggtgaagcggctgg 26068184
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 363      cacagcctcggcgcgtcgatcgcc 386
                |||||||||||||||||| |||||
Sbjct: 21662238 cacagcctcggcgcgtcgctcgcc 21662261
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 363      cacagcctcggcgcgtcgatcgcc 386
                |||||||||||||||||| |||||
Sbjct: 21673901 cacagcctcggcgcgtcgctcgcc 21673924
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 291      caggtcgtcaaggaggtgaagaggctgg 318
                ||||||||| ||||||||||| ||||||
Sbjct: 25996387 caggtcgtcgaggaggtgaagcggctgg 25996360
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>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161806

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 291   caggtcgtcaaggaggtgaagaggctgg 318
             ||||||||| ||||||||||| ||||||
Sbjct: 43460 caggtcgtcgaggaggtgaagcggctgg 43487
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>emb|CT030186.13| Mouse DNA sequence from clone RP23-80I4 on chromosome 12, complete
              sequence
          Length = 228891

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 330    aaggacgaggaggtcagcatcacc 353
              ||||| ||||||||||||||||||
Sbjct: 193551 aaggaagaggaggtcagcatcacc 193574


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,696,312
Number of Sequences: 3902068
Number of extensions: 2696312
Number of successful extensions: 52252
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 51842
Number of HSP's gapped (non-prelim): 410
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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