ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chiti... 102 4e-22
2CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip ... 98 9e-21
3SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein ... 32 0.81
4ADH1_DROMU (P07161) Alcohol dehydrogenase 1 (EC 1.1.1.1) 30 3.1
5ADH1_DROMO (P09370) Alcohol dehydrogenase 1 (EC 1.1.1.1) 29 4.0
6MRAZ_THICR (Q31I69) Protein mraZ 29 4.0
7Y43R_IRV6 (P18305) Hypothetical protein 443R 29 5.3
8CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog 28 6.9
9RUAP_SOYBN (P39657) RuBisCO-associated protein 28 6.9
10ADH_SCAAL (P25988) Alcohol dehydrogenase (EC 1.1.1.1) 28 9.0
11CORA_WHV2 (P06433) Core antigen 28 9.0
12ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disinteg... 28 9.0

>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  102 bits (254), Expect = 4e-22
 Identities = 49/85 (57%), Positives = 62/85 (72%)
 Frame = +2

Query: 170 LFRDYXGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 349
           LFR+Y GA +N V+F+DVPINP   F FILAF IDYT+ +  PTPTNG FN FW    L+
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSS-PTPTNGNFNPFWDTNNLS 60

Query: 350 PAAIAEVKRRNPNVRVAVSLGGATV 424
           P+ +A +KR   NV+V+VSLGG +V
Sbjct: 61  PSQVAAIKRTYNNVKVSVSLGGNSV 85



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>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 46/85 (54%), Positives = 62/85 (72%)
 Frame = +2

Query: 170 LFRDYXGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 349
           +FR+Y G+ +N V+F+DVPINP   F FILAF IDYT+ +  PTPTNG F  FW    L+
Sbjct: 28  VFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSS-PTPTNGNFKPFWDTNNLS 86

Query: 350 PAAIAEVKRRNPNVRVAVSLGGATV 424
           P+ +A VKR + NV+V++SLGG +V
Sbjct: 87  PSQVAAVKRTHSNVKVSLSLGGDSV 111



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>SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein Src (EC|
           2.7.10.2) (p60-Src) (v-Src) (pp60v-src)
          Length = 586

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 236 RARFDFILAFVIDYTTATEPPTP 304
           R  F+++ AF+ DY T+TEPP P
Sbjct: 505 RPTFEYLQAFLEDYFTSTEPPVP 527



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>ADH1_DROMU (P07161) Alcohol dehydrogenase 1 (EC 1.1.1.1)|
          Length = 253

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 308 NGRFNVFWQDTVLTPAAIAEVKRRNPNVRV 397
           +G  N+   D +  PAAIAE+K  NPNV V
Sbjct: 27  SGPKNLVILDRIENPAAIAELKALNPNVTV 56



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>ADH1_DROMO (P09370) Alcohol dehydrogenase 1 (EC 1.1.1.1)|
          Length = 253

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +2

Query: 311 GRFNVFWQDTVLTPAAIAEVKRRNPNVRVAVSLGGATV 424
           G  N+   D +  PAAIAE+K  NP V V   L   TV
Sbjct: 28  GPKNLVILDRIENPAAIAELKALNPKVTVTFYLYDVTV 65



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>MRAZ_THICR (Q31I69) Protein mraZ|
          Length = 152

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 298 DPDQRPVQRLLAGHGAHPRRDRRGQAAEPERAR 396
           DP  R VQRLL GH +    D +G+   P   R
Sbjct: 69  DPQARLVQRLLLGHASEMEMDGQGRVLLPSLLR 101



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>Y43R_IRV6 (P18305) Hypothetical protein 443R|
          Length = 2432

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 272 DYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEV 370
           DY T T+PPT   G  N  + D  +TP A   V
Sbjct: 355 DYITITDPPTVGTGAANKAYVDANITPNATPTV 387



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>CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog|
          Length = 402

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
 Frame = -1

Query: 126 CRW--RASRAGRRVAATSFVEPIDSSF----CYSCFC 34
           C W    S+ G R   T+   P+DSSF    C SC C
Sbjct: 237 CLWVPHCSQLGPRAGCTTHRHPLDSSFLCPPCLSCAC 273



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>RUAP_SOYBN (P39657) RuBisCO-associated protein|
          Length = 283

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 245 FDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEVKRRNP----NVRVAVSLG 412
           F   L+   DY    +    TNG+F  +W    +TP  I + K++       V+V VS+G
Sbjct: 29  FQVTLSLARDY----DGNNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSIG 84



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>ADH_SCAAL (P25988) Alcohol dehydrogenase (EC 1.1.1.1)|
          Length = 254

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 308 NGRFNVFWQDTVLTPAAIAEVKRRNPNVRVA 400
           +G  N+   D +  PAAIAE++  NPNV V+
Sbjct: 28  SGPKNLVILDRIENPAAIAELQAINPNVTVS 58



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>CORA_WHV2 (P06433) Core antigen|
          Length = 187

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 292 APDPDQRPVQRLLAGHGAHPRRDRRGQAAEPERARGSQPRRRHGQ 426
           AP     P   ++   GA   R  R +   P R R   PRRR  Q
Sbjct: 137 APILSTLPEHTVIRRGGARASRSPRRRTPSPRRRRSQSPRRRRSQ 181



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>ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 5) (ADAM-TS
           5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11)
          Length = 930

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 334 GHGAHPRRDRRGQAAEPERARGSQPRRRHGQ 426
           G  A P +D+ GQ   P  A  +QPRRR G+
Sbjct: 21  GPAATPAQDKAGQP--PTAAAAAQPRRRQGE 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,721,620
Number of Sequences: 219361
Number of extensions: 792729
Number of successful extensions: 2739
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2736
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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