Clone Name | bart59h05 |
---|---|
Clone Library Name | barley_pub |
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 102 bits (254), Expect = 4e-22 Identities = 49/85 (57%), Positives = 62/85 (72%) Frame = +2 Query: 170 LFRDYXGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 349 LFR+Y GA +N V+F+DVPINP F FILAF IDYT+ + PTPTNG FN FW L+ Sbjct: 2 LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSS-PTPTNGNFNPFWDTNNLS 60 Query: 350 PAAIAEVKRRNPNVRVAVSLGGATV 424 P+ +A +KR NV+V+VSLGG +V Sbjct: 61 PSQVAAIKRTYNNVKVSVSLGGNSV 85
>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb| chitinase-1) (TBC-1) Length = 314 Score = 97.8 bits (242), Expect = 9e-21 Identities = 46/85 (54%), Positives = 62/85 (72%) Frame = +2 Query: 170 LFRDYXGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 349 +FR+Y G+ +N V+F+DVPINP F FILAF IDYT+ + PTPTNG F FW L+ Sbjct: 28 VFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSS-PTPTNGNFKPFWDTNNLS 86 Query: 350 PAAIAEVKRRNPNVRVAVSLGGATV 424 P+ +A VKR + NV+V++SLGG +V Sbjct: 87 PSQVAAVKRTHSNVKVSLSLGGDSV 111
>SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein Src (EC| 2.7.10.2) (p60-Src) (v-Src) (pp60v-src) Length = 586 Score = 31.6 bits (70), Expect = 0.81 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 236 RARFDFILAFVIDYTTATEPPTP 304 R F+++ AF+ DY T+TEPP P Sbjct: 505 RPTFEYLQAFLEDYFTSTEPPVP 527
>ADH1_DROMU (P07161) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 253 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 308 NGRFNVFWQDTVLTPAAIAEVKRRNPNVRV 397 +G N+ D + PAAIAE+K NPNV V Sbjct: 27 SGPKNLVILDRIENPAAIAELKALNPNVTV 56
>ADH1_DROMO (P09370) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 253 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +2 Query: 311 GRFNVFWQDTVLTPAAIAEVKRRNPNVRVAVSLGGATV 424 G N+ D + PAAIAE+K NP V V L TV Sbjct: 28 GPKNLVILDRIENPAAIAELKALNPKVTVTFYLYDVTV 65
>MRAZ_THICR (Q31I69) Protein mraZ| Length = 152 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 298 DPDQRPVQRLLAGHGAHPRRDRRGQAAEPERAR 396 DP R VQRLL GH + D +G+ P R Sbjct: 69 DPQARLVQRLLLGHASEMEMDGQGRVLLPSLLR 101
>Y43R_IRV6 (P18305) Hypothetical protein 443R| Length = 2432 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 272 DYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEV 370 DY T T+PPT G N + D +TP A V Sbjct: 355 DYITITDPPTVGTGAANKAYVDANITPNATPTV 387
>CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog| Length = 402 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%) Frame = -1 Query: 126 CRW--RASRAGRRVAATSFVEPIDSSF----CYSCFC 34 C W S+ G R T+ P+DSSF C SC C Sbjct: 237 CLWVPHCSQLGPRAGCTTHRHPLDSSFLCPPCLSCAC 273
>RUAP_SOYBN (P39657) RuBisCO-associated protein| Length = 283 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Frame = +2 Query: 245 FDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEVKRRNP----NVRVAVSLG 412 F L+ DY + TNG+F +W +TP I + K++ V+V VS+G Sbjct: 29 FQVTLSLARDY----DGNNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSIG 84
>ADH_SCAAL (P25988) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 254 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 308 NGRFNVFWQDTVLTPAAIAEVKRRNPNVRVA 400 +G N+ D + PAAIAE++ NPNV V+ Sbjct: 28 SGPKNLVILDRIENPAAIAELQAINPNVTVS 58
>CORA_WHV2 (P06433) Core antigen| Length = 187 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/45 (33%), Positives = 18/45 (40%) Frame = +1 Query: 292 APDPDQRPVQRLLAGHGAHPRRDRRGQAAEPERARGSQPRRRHGQ 426 AP P ++ GA R R + P R R PRRR Q Sbjct: 137 APILSTLPEHTVIRRGGARASRSPRRRTPSPRRRRSQSPRRRRSQ 181
>ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11) Length = 930 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +1 Query: 334 GHGAHPRRDRRGQAAEPERARGSQPRRRHGQ 426 G A P +D+ GQ P A +QPRRR G+ Sbjct: 21 GPAATPAQDKAGQP--PTAAAAAQPRRRQGE 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,721,620 Number of Sequences: 219361 Number of extensions: 792729 Number of successful extensions: 2739 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2736 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)