ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59h04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H05, full insert sequence Length = 1754 Score = 343 bits (173), Expect = 3e-91 Identities = 248/273 (90%) Strand = Plus / Plus Query: 144 gacccgcgacctgcacctcctcagcttggccttcttcttcgtcttcctcgcctaccacgc 203 |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 182 gacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgc 241 Query: 204 cgcgcagaatctccagagcaccgtcgacacggacggcaatttggggtcaatatcgctggg 263 ||| ||||| || |||||||||||| ||||||||| || ||||||| | |||||||| Sbjct: 242 cgcccagaacctgcagagcaccgtcaacacggacgagaacctggggtcggtgtcgctggg 301 Query: 264 gttgctgtacacgtcgttcacggcgttctcggtcgtgggttcgccggtggtgcgggggat 323 | | ||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| Sbjct: 302 gctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtgcggcggat 361 Query: 324 ggggtccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaa 383 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaa 421 Query: 384 cctcgccccttcctggtatacaatggtaccagc 416 ||||| ||| |||||||| |||||||| ||||| Sbjct: 422 cctcgtcccctcctggtacacaatggtgccagc 454 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 46 gccggacccgagctcgcggcgtcccacgacgaggaggagg 85 |||||| |||||||||||| | ||| |||||||||||||| Sbjct: 75 gccggagccgagctcgcggtggccctcgacgaggaggagg 114
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 226 bits (114), Expect = 5e-56 Identities = 138/146 (94%) Strand = Plus / Minus Query: 256 tcgctggggttgctgtacacgtcgttcacggcgttctcggtcgtgggttcgccggtggtg 315 ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 23348697 tcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtg 23348638 Query: 316 cgggggatggggtccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatc 375 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 23348637 cggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatc 23348578 Query: 376 gccgccaacctcgccccttcctggta 401 ||||||||||||| ||| |||||||| Sbjct: 23348577 gccgccaacctcgtcccctcctggta 23348552 Score = 119 bits (60), Expect = 8e-24 Identities = 84/92 (91%) Strand = Plus / Minus Query: 144 gacccgcgacctgcacctcctcagcttggccttcttcttcgtcttcctcgcctaccacgc 203 |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 23348928 gacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgc 23348869 Query: 204 cgcgcagaatctccagagcaccgtcgacacgg 235 ||| ||||| || |||||||||||| |||||| Sbjct: 23348868 cgcccagaacctgcagagcaccgtcaacacgg 23348837 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 46 gccggacccgagctcgcggcgtcccacgacgaggaggagg 85 |||||| |||||||||||| | ||| |||||||||||||| Sbjct: 23349035 gccggagccgagctcgcggtggccctcgacgaggaggagg 23348996 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 328 tccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctc 387 |||| ||| |||||||| |||||||| ||||||| || |||||||| |||||||||| Sbjct: 23345390 tccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctcgccaacctc 23345331 Query: 388 g 388 | Sbjct: 23345330 g 23345330 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||||||||| ||||||| |||||||||||| ||| ||||| Sbjct: 23345653 tcttcgtcttctccgcctactgcgccgcgcagaacctcgagagc 23345610 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||| ||||| ||||||| |||||||||||| ||||||||| Sbjct: 23339700 tcttcatcttctccgcctactgcgccgcgcagaacctccagagc 23339657
>dbj|AK107030.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A11, full insert sequence Length = 805 Score = 226 bits (114), Expect = 5e-56 Identities = 138/146 (94%) Strand = Plus / Minus Query: 256 tcgctggggttgctgtacacgtcgttcacggcgttctcggtcgtgggttcgccggtggtg 315 ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 280 tcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtg 221 Query: 316 cgggggatggggtccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatc 375 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatc 161 Query: 376 gccgccaacctcgccccttcctggta 401 ||||||||||||| ||| |||||||| Sbjct: 160 gccgccaacctcgtcccctcctggta 135 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 144 gacccgcgacctgcacctcctcagcttggccttcttcttcgtcttcctcgcctaccacgc 203 |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 362 gacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgc 303 Query: 204 cgcgcagaa 212 ||| ||||| Sbjct: 302 cgcccagaa 294 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 46 gccggacccgagctcgcggcgtcccacgacgaggaggagg 85 |||||| |||||||||||| | ||| |||||||||||||| Sbjct: 469 gccggagccgagctcgcggtggccctcgacgaggaggagg 430
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 226 bits (114), Expect = 5e-56 Identities = 138/146 (94%) Strand = Plus / Minus Query: 256 tcgctggggttgctgtacacgtcgttcacggcgttctcggtcgtgggttcgccggtggtg 315 ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 23276888 tcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtg 23276829 Query: 316 cgggggatggggtccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatc 375 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 23276828 cggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatc 23276769 Query: 376 gccgccaacctcgccccttcctggta 401 ||||||||||||| ||| |||||||| Sbjct: 23276768 gccgccaacctcgtcccctcctggta 23276743 Score = 119 bits (60), Expect = 8e-24 Identities = 84/92 (91%) Strand = Plus / Minus Query: 144 gacccgcgacctgcacctcctcagcttggccttcttcttcgtcttcctcgcctaccacgc 203 |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 23277119 gacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgc 23277060 Query: 204 cgcgcagaatctccagagcaccgtcgacacgg 235 ||| ||||| || |||||||||||| |||||| Sbjct: 23277059 cgcccagaacctgcagagcaccgtcaacacgg 23277028 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 46 gccggacccgagctcgcggcgtcccacgacgaggaggagg 85 |||||| |||||||||||| | ||| |||||||||||||| Sbjct: 23277226 gccggagccgagctcgcggtggccctcgacgaggaggagg 23277187 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 328 tccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctc 387 |||| ||| |||||||| |||||||| ||||||| || |||||||| |||||||||| Sbjct: 23273581 tccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctcgccaacctc 23273522 Query: 388 g 388 | Sbjct: 23273521 g 23273521 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||||||||| ||||||| |||||||||||| ||| ||||| Sbjct: 23273844 tcttcgtcttctccgcctactgcgccgcgcagaacctcgagagc 23273801 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||| ||||| ||||||| |||||||||||| ||||||||| Sbjct: 23267891 tcttcatcttctccgcctactgcgccgcgcagaacctccagagc 23267848
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 226 bits (114), Expect = 5e-56 Identities = 138/146 (94%) Strand = Plus / Minus Query: 256 tcgctggggttgctgtacacgtcgttcacggcgttctcggtcgtgggttcgccggtggtg 315 ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 161815 tcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtg 161756 Query: 316 cgggggatggggtccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatc 375 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 161755 cggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatc 161696 Query: 376 gccgccaacctcgccccttcctggta 401 ||||||||||||| ||| |||||||| Sbjct: 161695 gccgccaacctcgtcccctcctggta 161670 Score = 119 bits (60), Expect = 8e-24 Identities = 84/92 (91%) Strand = Plus / Minus Query: 144 gacccgcgacctgcacctcctcagcttggccttcttcttcgtcttcctcgcctaccacgc 203 |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 162046 gacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgc 161987 Query: 204 cgcgcagaatctccagagcaccgtcgacacgg 235 ||| ||||| || |||||||||||| |||||| Sbjct: 161986 cgcccagaacctgcagagcaccgtcaacacgg 161955 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 46 gccggacccgagctcgcggcgtcccacgacgaggaggagg 85 |||||| |||||||||||| | ||| |||||||||||||| Sbjct: 162153 gccggagccgagctcgcggtggccctcgacgaggaggagg 162114 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 328 tccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctc 387 |||| ||| |||||||| |||||||| ||||||| || |||||||| |||||||||| Sbjct: 158508 tccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctcgccaacctc 158449 Query: 388 g 388 | Sbjct: 158448 g 158448 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||||||||| ||||||| |||||||||||| ||| ||||| Sbjct: 158771 tcttcgtcttctccgcctactgcgccgcgcagaacctcgagagc 158728 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||| ||||| ||||||| |||||||||||| ||||||||| Sbjct: 152818 tcttcatcttctccgcctactgcgccgcgcagaacctccagagc 152775
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 226 bits (114), Expect = 5e-56 Identities = 138/146 (94%) Strand = Plus / Plus Query: 256 tcgctggggttgctgtacacgtcgttcacggcgttctcggtcgtgggttcgccggtggtg 315 ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 153462 tcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtg 153521 Query: 316 cgggggatggggtccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatc 375 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 153522 cggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatc 153581 Query: 376 gccgccaacctcgccccttcctggta 401 ||||||||||||| ||| |||||||| Sbjct: 153582 gccgccaacctcgtcccctcctggta 153607 Score = 119 bits (60), Expect = 8e-24 Identities = 84/92 (91%) Strand = Plus / Plus Query: 144 gacccgcgacctgcacctcctcagcttggccttcttcttcgtcttcctcgcctaccacgc 203 |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 153231 gacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgc 153290 Query: 204 cgcgcagaatctccagagcaccgtcgacacgg 235 ||| ||||| || |||||||||||| |||||| Sbjct: 153291 cgcccagaacctgcagagcaccgtcaacacgg 153322 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 46 gccggacccgagctcgcggcgtcccacgacgaggaggagg 85 |||||| |||||||||||| | ||| |||||||||||||| Sbjct: 153124 gccggagccgagctcgcggtggccctcgacgaggaggagg 153163 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 328 tccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctc 387 |||| ||| |||||||| |||||||| ||||||| || |||||||| |||||||||| Sbjct: 156769 tccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctcgccaacctc 156828 Query: 388 g 388 | Sbjct: 156829 g 156829 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||||||||| ||||||| |||||||||||| ||| ||||| Sbjct: 156506 tcttcgtcttctccgcctactgcgccgcgcagaacctcgagagc 156549
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 ccggcgacggcggccgcggttcaggc 132 ||||||||||||| |||||||||||| Sbjct: 1790005 ccggcgacggcggtcgcggttcaggc 1790030 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tccacaccggccgccatggac 36 ||||||||||||||||||||| Sbjct: 2949554 tccacaccggccgccatggac 2949574
>ref|NM_124559.2| Arabidopsis thaliana unknown protein AT5G51800 mRNA, complete cds Length = 3151 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 cttcttcttcgtcttcctcgc 194 ||||||||||||||||||||| Sbjct: 1241 cttcttcttcgtcttcctcgc 1261
>ref|NM_190856.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 cttggccttcttcttcgtcttcctc 192 |||||||||||||||| |||||||| Sbjct: 213 cttggccttcttcttcttcttcctc 189
>ref|XM_478422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 148 gtctccgtctccggcgacggcggcggcgg 176
>ref|XM_478421.1| Oryza sativa (japonica cultivar-group), mRNA Length = 787 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 151 gtctccgtctccggcgacggcggcggcgg 179
>ref|XM_506371.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036M16.111-2 mRNA Length = 801 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 198 gtctccgtctccggcgacggcggcggcgg 226
>ref|XM_600028.2| PREDICTED: Bos taurus similar to RNA-specific adenosine deaminase B1 isoform DRADA2a (LOC521761), mRNA Length = 2889 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 cagcttggccttcttcttcgt 185 ||||||||||||||||||||| Sbjct: 1179 cagcttggccttcttcttcgt 1159
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ccccggcgacggcggccgcgg 125 ||||||||||||||||||||| Sbjct: 64537 ccccggcgacggcggccgcgg 64557
>gb|AC141113.5| Medicago truncatula clone mth2-7h7, complete sequence Length = 138094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 cttcttcttcgtcttcctcgc 194 ||||||||||||||||||||| Sbjct: 67517 cttcttcttcgtcttcctcgc 67537
>gb|AC174293.6| Medicago truncatula clone mth2-70h5, complete sequence Length = 132047 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcgc 194 ||||||||||||||||||||| Sbjct: 118468 cttcttcttcgtcttcctcgc 118448
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggctc 91 ||||||||||||||||||||| Sbjct: 84770 acgacgaggaggaggcggctc 84790
>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster Length = 84985 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ccccggcgacggcggccgcgg 125 ||||||||||||||||||||| Sbjct: 31850 ccccggcgacggcggccgcgg 31870
>gb|DQ020252.1|DQ020253S2 Streptomyces sp. UNSW 094300 type I PKS gene, partial cds Length = 985 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccccggcgacggcggccgcgg 125 ||||||||||||||||||||| Sbjct: 293 ccccggcgacggcggccgcgg 273
>emb|AL114033.1|CNS01BBT Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 ttggccttcttcttcgtcttc 189 ||||||||||||||||||||| Sbjct: 450 ttggccttcttcttcgtcttc 430
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggctc 91 ||||||||||||||||||||| Sbjct: 31102689 acgacgaggaggaggcggctc 31102709
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 19882120 gtctccgtctccggcgacggcggcggcgg 19882148 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgtccccggcgacggcggccgcgg 125 ||||||||||||||||||| |||| Sbjct: 15848162 cgtccccggcgacggcggcggcgg 15848139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gctcgcggcgtcccacgacg 76 |||||||||||||||||||| Sbjct: 5897155 gctcgcggcgtcccacgacg 5897136
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 tagtctccgtccccggcgacggcgg 119 |||||| |||||||||||||||||| Sbjct: 12506617 tagtcttcgtccccggcgacggcgg 12506593
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 cttggccttcttcttcgtcttcctc 192 |||||||||||||||| |||||||| Sbjct: 33488125 cttggccttcttcttcttcttcctc 33488101
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 cttggccttcttcttcgtcttcctc 192 |||||||||||||||| |||||||| Sbjct: 33322 cttggccttcttcttcttcttcctc 33298
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 46770 gtctccgtctccggcgacggcggcggcgg 46798
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 122279 gtctccgtctccggcgacggcggcggcgg 122307
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 tagtctccgtccccggcgacggcgg 119 |||||| |||||||||||||||||| Sbjct: 11150 tagtcttcgtccccggcgacggcgg 11126
>dbj|AB010074.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIO24 Length = 86212 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 cttcttcttcgtcttcctcgc 194 ||||||||||||||||||||| Sbjct: 53579 cttcttcttcgtcttcctcgc 53599
>dbj|AK109171.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H06, full insert sequence Length = 739 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 328 tccaggcgagcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctc 387 |||| ||| |||||||| |||||||| ||||||| || |||||||| |||||||||| Sbjct: 342 tccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctcgccaacctc 401 Query: 388 g 388 | Sbjct: 402 g 402 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 179 tcttcgtcttcctcgcctaccacgccgcgcagaatctccagagc 222 ||||||||||| ||||||| |||||||||||| ||| ||||| Sbjct: 193 tcttcgtcttctccgcctactgcgccgcgcagaacctcgagagc 236
>dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A04, full insert sequence Length = 1207 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 acgacgaggaggaggcggctc 91 ||||||||||||||||||||| Sbjct: 100 acgacgaggaggaggcggctc 80
>dbj|AK100639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110F08, full insert sequence Length = 1704 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 cttggccttcttcttcgtcttcctc 192 |||||||||||||||| |||||||| Sbjct: 261 cttggccttcttcttcttcttcctc 237
>dbj|AK099296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P10, full insert sequence Length = 787 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 151 gtctccgtctccggcgacggcggcggcgg 179
>dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E14, full insert sequence Length = 1218 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 acgacgaggaggaggcggctc 91 ||||||||||||||||||||| Sbjct: 73 acgacgaggaggaggcggctc 53
>dbj|AK071773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H14, full insert sequence Length = 800 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 198 gtctccgtctccggcgacggcggcggcgg 226
>dbj|AK070450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048N16, full insert sequence Length = 1720 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 cttggccttcttcttcgtcttcctc 192 |||||||||||||||| |||||||| Sbjct: 261 cttggccttcttcttcttcttcctc 237
>dbj|AK063798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F05, full insert sequence Length = 872 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggccgcgg 125 ||||||||| |||||||||||||| |||| Sbjct: 148 gtctccgtctccggcgacggcggcggcgg 176
>dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H03, full insert sequence Length = 1262 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 acgacgaggaggaggcggctc 91 ||||||||||||||||||||| Sbjct: 98 acgacgaggaggaggcggctc 78
>ref|NM_100479.2| Arabidopsis thaliana calcium ion binding AT1G05990 mRNA, complete cds Length = 594 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 373 cttcttcttcgtcttcctcg 354
>gb|AC147455.3| Atelerix albiventris clone LB4-341B4, complete sequence Length = 164065 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 43401 ccttcttcttcgtcttcctc 43382 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 43319 ccttcttcttcgtcttcctc 43300 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 43237 ccttcttcttcgtcttcctc 43218
>ref|XM_635158.1| Dictyostelium discoideum hypothetical protein (DDB0204172), partial mRNA Length = 2163 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 475 cttcttcttcgtcttcctcg 456
>ref|XM_477950.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2717 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgtccccggcgacggcggccgcgg 125 ||||||||||||||||||| |||| Sbjct: 407 cgtccccggcgacggcggcggcgg 430
>ref|XM_477094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 982 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gctcgcggcgtcccacgacg 76 |||||||||||||||||||| Sbjct: 268 gctcgcggcgtcccacgacg 249
>ref|XM_952288.1| Neurospora crassa OR74A hypothetical protein (NCU07156.1) partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 caccgtcgacacggacggca 241 |||||||||||||||||||| Sbjct: 1002 caccgtcgacacggacggca 1021
>gb|BC016620.1| Homo sapiens xeroderma pigmentosum, complementation group C, mRNA (cDNA clone MGC:21338 IMAGE:4509957), complete cds Length = 3658 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 3012 gcacctcctcagcttggcct 2993
>ref|XM_327441.1| Neurospora crassa OR74A hypothetical protein (NCU07156.1) partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 caccgtcgacacggacggca 241 |||||||||||||||||||| Sbjct: 1002 caccgtcgacacggacggca 1021
>ref|XM_846960.1| PREDICTED: Canis familiaris similar to trans-acting transcription factor 3 isoform 1 (LOC488405), mRNA Length = 3777 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 203 acgacgaggaggaggcggct 222
>ref|XM_743383.1| Aspergillus fumigatus Af293 retinitis pigmentosa GTPase regulator (Afu3g01550) partial mRNA Length = 1776 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tcatcgccgccaacctcgcc 390 |||||||||||||||||||| Sbjct: 692 tcatcgccgccaacctcgcc 673
>ref|XM_743384.1| Aspergillus fumigatus Af293 amino acid permease (Afu3g01560) partial mRNA Length = 1707 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tcatcgccgccaacctcgcc 390 |||||||||||||||||||| Sbjct: 1019 tcatcgccgccaacctcgcc 1038
>ref|XM_800234.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511429.10) partial mRNA Length = 3676 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 1362 ccttcttcttcgtcttcctc 1343
>emb|CR731021.2|CNS0GR02 Tetraodon nigroviridis full-length cDNA Length = 2136 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tgtacacgtcgttcacggcg 288 |||||||||||||||||||| Sbjct: 738 tgtacacgtcgttcacggcg 719
>emb|CR655690.2|CNS0F4WG Tetraodon nigroviridis full-length cDNA Length = 1030 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tgtacacgtcgttcacggcg 288 |||||||||||||||||||| Sbjct: 704 tgtacacgtcgttcacggcg 685
>emb|CR654184.2|CNS0F3QM Tetraodon nigroviridis full-length cDNA Length = 1053 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tgtacacgtcgttcacggcg 288 |||||||||||||||||||| Sbjct: 725 tgtacacgtcgttcacggcg 706
>emb|CR650204.2|CNS0F0O2 Tetraodon nigroviridis full-length cDNA Length = 943 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tgtacacgtcgttcacggcg 288 |||||||||||||||||||| Sbjct: 728 tgtacacgtcgttcacggcg 709
>gb|AC148481.9| Medicago truncatula clone mth2-36d21, complete sequence Length = 105513 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 94135 ccttcttcttcgtcttcctc 94154
>gb|AC140027.11| Medicago truncatula clone mth2-5m21, complete sequence Length = 131365 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 124693 ccttcttcttcgtcttcctc 124674
>ref|NM_004628.3| Homo sapiens xeroderma pigmentosum, complementation group C (XPC), mRNA Length = 3714 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 3068 gcacctcctcagcttggcct 3049
>ref|XM_961971.1| PREDICTED: Tribolium castaneum similar to CG11856-PA (LOC655426), mRNA Length = 8340 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cttcttcgtcttcctcgcct 196 |||||||||||||||||||| Sbjct: 7417 cttcttcgtcttcctcgcct 7398
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 gcgctcgtgctcggcacctccggc 360 |||||||||||||||||| ||||| Sbjct: 3368028 gcgctcgtgctcggcaccgccggc 3368051
>emb|BX294028.1|NC103E1 Neurospora crassa DNA linkage group V Cosmid contig 103E1 Length = 87435 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 caccgtcgacacggacggca 241 |||||||||||||||||||| Sbjct: 32028 caccgtcgacacggacggca 32009
>emb|AL023893.1|DMC132E8 Drosophila melanogaster cosmid clone 132E8 Length = 39910 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 31969 acgacgaggaggaggcggct 31988
>emb|AL732589.4| Mouse DNA sequence from clone RP23-405I23 on chromosome 11 Contains a 3'-5' exoribonuclease CSL4 homolog pseudogene and a glutamate-ammonia ligase (glutamine synthase) (Glul) pseudogene, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ctcctcagcttggccttctt 179 |||||||||||||||||||| Sbjct: 126807 ctcctcagcttggccttctt 126788
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 117816 ccttcttcttcgtcttcctc 117797 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 102461 ccttcttcttcgtcttcctc 102442
>gb|AF261901.1|F261892S10 Homo sapiens xeroderma pigmentosum group C protein (XPC) gene, exon 15 and complete cds Length = 1009 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 553 gcacctcctcagcttggcct 534
>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181360 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 71390 acgacgaggaggaggcggct 71409
>gb|AY131066.1| Homo sapiens xeroderma pigmentosum, complementation group C (XPC) gene, complete cds Length = 34793 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 33694 gcacctcctcagcttggcct 33675
>emb|CR615074.1| full-length cDNA clone CS0DF019YN06 of Fetal brain of Homo sapiens (human) Length = 1603 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 1059 gcacctcctcagcttggcct 1040
>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence Length = 123626 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 42912 ccttcttcttcgtcttcctc 42893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 27912 ccttcttcttcgtcttcctc 27893
>ref|NM_130554.2| Drosophila melanogaster CG11448-RA (CG11448), mRNA Length = 3774 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 1525 acgacgaggaggaggcggct 1544
>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164252 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 130905 acgacgaggaggaggcggct 130924
>gb|AY060341.1| Drosophila melanogaster GH23825 full length cDNA Length = 3727 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 1459 acgacgaggaggaggcggct 1478
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 973957 ccttcttcttcgtcttcctc 973938 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 973875 ccttcttcttcgtcttcctc 973856 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 973793 ccttcttcttcgtcttcctc 973774
>gb|AC018574.6| Homo sapiens chromosome , clone RP11-4G2, complete sequence Length = 171858 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ctcctcagcttggccttcttcttc 183 |||||||||||| ||||||||||| Sbjct: 144999 ctcctcagcttgcccttcttcttc 144976
>gb|AF332466.1| Arabidopsis thaliana clone C00174 (e) putative calcium-binding protein (At1g05990) mRNA, complete cds Length = 453 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 232 cttcttcttcgtcttcctcg 213
>dbj|AK020753.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430101K10 product:acidic nuclear phosphoprotein 32, full insert sequence Length = 1141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 797 cttcttcttcgtcttcctcg 778
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgtccccggcgacggcggc 120 |||||||||||||||||||| Sbjct: 23459785 ccgtccccggcgacggcggc 23459766
>gb|AC090886.1|AC090886 Homo sapiens chromosome 3 clone RP11-320K24 map 3p, complete sequence Length = 168778 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 61610 gcacctcctcagcttggcct 61591
>gb|AC090645.1|AC090645 Homo sapiens chromosome 3 clone RP11-556G18 map 3p, complete sequence Length = 162869 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 108717 gcacctcctcagcttggcct 108736
>dbj|AK222844.1| Homo sapiens mRNA for xeroderma pigmentosum, complementation group C variant, clone: HEP08569 Length = 3436 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 2794 gcacctcctcagcttggcct 2775
>gb|AF328514.1|AF328514 Homo sapiens clone 4qtel_2173c2t7 sequence Length = 872 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 acctcctcagcttggccttc 177 |||||||||||||||||||| Sbjct: 696 acctcctcagcttggccttc 715
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cggccggccgctccacaccg 24 |||||||||||||||||||| Sbjct: 3740650 cggccggccgctccacaccg 3740631
>gb|AC093495.2| Homo sapiens chromosome 3 clone RP11-434D12 map 3p, complete sequence Length = 173066 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 114377 gcacctcctcagcttggcct 114358
>gb|AC026336.20| Homo sapiens 12 BAC RP11-143E21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169758 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccttcttcttcgtcttcctc 192 |||||||||||||||||||| Sbjct: 13335 ccttcttcttcgtcttcctc 13316
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74316 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 17966 cttcttcttcgtcttcctcg 17947
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgtccccggcgacggcggc 120 |||||||||||||||||||| Sbjct: 119340 ccgtccccggcgacggcggc 119321
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgtccccggcgacggcggccgcgg 125 ||||||||||||||||||| |||| Sbjct: 87676 cgtccccggcgacggcggcggcgg 87653
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gctcgcggcgtcccacgacg 76 |||||||||||||||||||| Sbjct: 39603 gctcgcggcgtcccacgacg 39584
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gctcgcggcgtcccacgacg 76 |||||||||||||||||||| Sbjct: 71829 gctcgcggcgtcccacgacg 71810
>emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 in linkage group 15, complete sequence Length = 152072 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 110673 acgacgaggaggaggcggct 110692
>dbj|AK101301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033K06, full insert sequence Length = 2717 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgtccccggcgacggcggccgcgg 125 ||||||||||||||||||| |||| Sbjct: 407 cgtccccggcgacggcggcggcgg 430
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cggccgctccacaccggccg 28 |||||||||||||||||||| Sbjct: 3204740 cggccgctccacaccggccg 3204759
>dbj|AK067003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094N02, full insert sequence Length = 982 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gctcgcggcgtcccacgacg 76 |||||||||||||||||||| Sbjct: 268 gctcgcggcgtcccacgacg 249
>gb|BC062899.1| Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member A, mRNA (cDNA clone MGC:73444 IMAGE:6415168), complete cds Length = 2022 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 749 cttcttcttcgtcttcctcg 730
>gb|AF146191.1|AF146191 Homo sapiens FRG1 (FRG1) gene, complete cds; 5S ribosomal RNA gene, complete sequence; TUB4q and TIG2 pseudogenes, complete sequence Length = 133974 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 acctcctcagcttggccttc 177 |||||||||||||||||||| Sbjct: 93837 acctcctcagcttggccttc 93856
>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete sequence Length = 308311 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acgacgaggaggaggcggct 90 |||||||||||||||||||| Sbjct: 242225 acgacgaggaggaggcggct 242244
>ref|NM_009672.2| Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member A (Anp32a), mRNA Length = 2022 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 749 cttcttcttcgtcttcctcg 730
>gb|AF022957.1|AF022957 Mus musculus cerebellar leucine rich acidic nuclear protein (Lanp) mRNA, complete cds Length = 863 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 743 cttcttcttcgtcttcctcg 724
>gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complete sequence Length = 178176 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 108016 cttcttcttcgtcttcctcg 108035
>gb|U73478.1|MMU73478 Mus musculus acidic nuclear phosphoprotein pp32 mRNA, complete cds Length = 980 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttcttcttcgtcttcctcg 193 |||||||||||||||||||| Sbjct: 701 cttcttcttcgtcttcctcg 682
>emb|X65024.1|HSXPCC H.sapiens mRNA for xeroderma pigmentosum group C complementing factor (XP-C) Length = 3455 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 2837 gcacctcctcagcttggcct 2818
>gb|M73842.1|KPNILUK Klebsiella pneumoniae acetolactate synthase (iluk) gene, complete cds Length = 2055 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gtctccgtccccggcgacggcggc 120 ||||||||| |||||||||||||| Sbjct: 1464 gtctccgtctccggcgacggcggc 1487
>dbj|D21089.1|HUMXPCR Human mRNA for XP-C repair complementing protein (p125), complete cds Length = 3558 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gcacctcctcagcttggcct 175 |||||||||||||||||||| Sbjct: 3102 gcacctcctcagcttggcct 3083 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,673,521 Number of Sequences: 3902068 Number of extensions: 2673521 Number of successful extensions: 84416 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83134 Number of HSP's gapped (non-prelim): 1282 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
