ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475515.1| Oryza sativa (japonica cultivar-group), predic... 135 1e-28
2gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome... 135 1e-28
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
4ref|XM_470662.1| Oryza sativa (japonica cultivar-group), predic... 70 7e-09
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 70 7e-09
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare str... 70 7e-09
8gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
9dbj|AK101724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
10dbj|AK058710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
11dbj|AP006863.1| Lotus japonicus genomic DNA, chromosome 2, clone... 62 2e-06
12gb|AY109610.1| Zea mays CL15937_1 mRNA sequence 58 3e-05
13ref|NM_111864.2| Arabidopsis thaliana organic anion transporter ... 44 0.40
14gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 44 0.40
15ref|XM_467005.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
16gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, r... 42 1.6
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AK106784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
20gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64... 42 1.6
21ref|XM_483381.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
22ref|XM_525213.1| PREDICTED: Pan troglodytes LOC469828 (LOC469828... 40 6.3
23ref|XM_366490.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 6.3
24ref|XM_610118.2| PREDICTED: Bos taurus similar to tetratricopept... 40 6.3
25gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, comp... 40 6.3
26ref|XM_846557.1| PREDICTED: Canis familiaris similar to Kazal-ty... 40 6.3
27gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 6.3
28gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete s... 40 6.3
29gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 40 6.3
30gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequ... 40 6.3
31gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequ... 40 6.3
32gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete s... 40 6.3
33gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome 40 6.3
34gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complet... 40 6.3
35gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 6.3
36gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.3
37gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.3
38emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complet... 40 6.3
39dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.3
40emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chrom... 40 6.3
41dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 6.3
42gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
44gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 6.3
45dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
46emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chr... 40 6.3
47dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
48dbj|AK108208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
49gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3 
>ref|XM_475515.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score =  135 bits (68), Expect = 1e-28
 Identities = 95/104 (91%)
 Strand = Plus / Plus

                                                                       
Query: 216 gtggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacgg 275
           ||||||||||||||||||||| ||||| || |||||||||| |||||||||   ||||||
Sbjct: 141 gtggtacgcgtccaacatcggggtgctcctcctcaacaagttcctcctctccacctacgg 200

                                                       
Query: 276 cttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
            ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttccgctacccggtcttcctcaccgcctgccacatgtccgcct 244



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 427 ttctgcggctccgtggtcgacggcaacgtctcgct 461
           ||||||| ||||||||||| ||| |||||||||||
Sbjct: 355 ttctgcgcctccgtggtcgccgggaacgtctcgct 389
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>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
             complete sequence
          Length = 122768

 Score =  135 bits (68), Expect = 1e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                         
Query: 216   gtggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacgg 275
             ||||||||||||||||||||| ||||| || |||||||||| |||||||||   ||||||
Sbjct: 96110 gtggtacgcgtccaacatcggggtgctcctcctcaacaagttcctcctctccacctacgg 96051

                                                         
Query: 276   cttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
              ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 96050 gttccgctacccggtcttcctcaccgcctgccacatgtccgcct 96007



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 427   ttctgcggctccgtggtcgacggcaacgtctcgct 461
             ||||||| ||||||||||| ||| |||||||||||
Sbjct: 95896 ttctgcgcctccgtggtcgccgggaacgtctcgct 95862
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 1e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                           
Query: 216     gtggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacgg 275
               ||||||||||||||||||||| ||||| || |||||||||| |||||||||   ||||||
Sbjct: 1140499 gtggtacgcgtccaacatcggggtgctcctcctcaacaagttcctcctctccacctacgg 1140440

                                                           
Query: 276     cttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
                ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1140439 gttccgctacccggtcttcctcaccgcctgccacatgtccgcct 1140396



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 427     ttctgcggctccgtggtcgacggcaacgtctcgct 461
               ||||||| ||||||||||| ||| |||||||||||
Sbjct: 1140285 ttctgcgcctccgtggtcgccgggaacgtctcgct 1140251
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>ref|XM_470662.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 969

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                       
Query: 217 tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
           |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 91  tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 150

                                                      
Query: 277 ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
           |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 151 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 193



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 423 cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
           |||||||||||||||||| |||  |||||||||||||||
Sbjct: 294 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 332
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                           
Query: 217     tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
               |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 9844519 tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 9844578

                                                          
Query: 277     ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
               |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 9844579 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 9844621



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 423     cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
               |||||||||||||||||| |||  |||||||||||||||
Sbjct: 9844722 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 9844760
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                           
Query: 217     tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
               |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 9842640 tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 9842699

                                                          
Query: 277     ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
               |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 9842700 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 9842742



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 423     cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
               |||||||||||||||||| |||  |||||||||||||||
Sbjct: 9842843 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 9842881
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>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                        
Query: 217  tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
            |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 6908 tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 6967

                                                       
Query: 277  ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
            |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 6968 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 7010



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 423  cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
            |||||||||||||||||| |||  |||||||||||||||
Sbjct: 7111 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 7149
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>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Minus

                                                                         
Query: 217   tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
             |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 29978 tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 29919

                                                        
Query: 277   ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
             |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 29918 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 29876



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 423   cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
             |||||||||||||||||| |||  |||||||||||||||
Sbjct: 29775 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 29737
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>dbj|AK101724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061B10, full
           insert sequence
          Length = 1370

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                       
Query: 217 tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
           |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 79  tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 138

                                                      
Query: 277 ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
           |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 139 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 181



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 423 cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
           |||||||||||||||||| |||  |||||||||||||||
Sbjct: 282 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 320
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>dbj|AK058710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D05, full
           insert sequence
          Length = 1524

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                       
Query: 217 tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggc 276
           |||||| | |||||||||||||| || || ||||||||||||||||||     |||||||
Sbjct: 234 tggtactcctccaacatcggcgtcctcctcctcaacaagtacctcctcagcaactacggc 293

                                                      
Query: 277 ttccggtacccggtcttcctcaccgcctgccacatgtccgcct 319
           |||  ||||||  |||||||||||   ||||||||||||||||
Sbjct: 294 ttcaagtacccaatcttcctcaccatgtgccacatgtccgcct 336



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 423 cgtcttctgcggctccgtggtcgacggcaacgtctcgct 461
           |||||||||||||||||| |||  |||||||||||||||
Sbjct: 437 cgtcttctgcggctccgtcgtctccggcaacgtctcgct 475
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>dbj|AP006863.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08G16, TM0934,
              complete sequence
          Length = 104894

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                          
Query: 226    tccaacatcggcgtgctgctgctcaacaagtacctcctctcgttctacggcttccggtac 285
              |||||||||||||| || || ||||||||||||||||||   |||||||| | ||| |||
Sbjct: 100771 tccaacatcggcgtcctcctcctcaacaagtacctcctcagcttctacggttaccgctac 100712

                             
Query: 286    ccggtcttcctcacc 300
              ||  |||||||||||
Sbjct: 100711 cctatcttcctcacc 100697
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>gb|AY109610.1| Zea mays CL15937_1 mRNA sequence
          Length = 1222

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 423  cgtcttctgcggctccgtggtcgacggcaacgtctcgctgc 463
            |||||||||||||||||| |||  |||||||||||||||||
Sbjct: 1137 cgtcttctgcggctccgtcgtctccggcaacgtctcgctgc 1097
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>ref|NM_111864.2| Arabidopsis thaliana organic anion transporter AT3G10290 mRNA,
           complete cds
          Length = 1176

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 217 tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctc 266
           |||||| | ||||||||||| || || || |||||||||| |||||||||
Sbjct: 193 tggtacacctccaacatcggtgttcttctcctcaacaagttcctcctctc 242
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>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
             complete sequence
          Length = 87937

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 217   tggtacgcgtccaacatcggcgtgctgctgctcaacaagtacctcctctc 266
             |||||| | ||||||||||| || || || |||||||||| |||||||||
Sbjct: 45634 tggtacacctccaacatcggtgttcttctcctcaacaagttcctcctctc 45683
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>ref|XM_467005.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  gcgccggcgccggccaaccag 40
           |||||||||||||||||||||
Sbjct: 663 gcgccggcgccggccaaccag 683
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>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone
              BACR48K02, complete sequence
          Length = 178530

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 29     ccggccaaccagaccagacgaaaccagag 57
              ||||||||||||||||||| | |||||||
Sbjct: 101689 ccggccaaccagaccagaccagaccagag 101661
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 20       gcgccggcgccggccaaccag 40
                |||||||||||||||||||||
Sbjct: 25860235 gcgccggcgccggccaaccag 25860215
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_H11
          Length = 143314

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    gcgccggcgccggccaaccag 40
             |||||||||||||||||||||
Sbjct: 11576 gcgccggcgccggccaaccag 11556
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>dbj|AK106784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H10, full
           insert sequence
          Length = 1598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  gcgccggcgccggccaaccag 40
           |||||||||||||||||||||
Sbjct: 663 gcgccggcgccggccaaccag 683
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>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete
              sequence
          Length = 253771

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 29     ccggccaaccagaccagacgaaaccagag 57
              ||||||||||||||||||| | |||||||
Sbjct: 229314 ccggccaaccagaccagaccagaccagag 229286
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>ref|XM_483381.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  gcgccggcgccggccaacca 39
           ||||||||||||||||||||
Sbjct: 473 gcgccggcgccggccaacca 492
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>ref|XM_525213.1| PREDICTED: Pan troglodytes LOC469828 (LOC469828), mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 387 gcgcgggcaggcggcgagggtggccgtg 414
           ||||||||||| |||||||||| |||||
Sbjct: 342 gcgcgggcagggggcgagggtgcccgtg 315
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>ref|XM_366490.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02566.4) partial mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 agcaggaggaccgggcgctcctcc 127
           |||||| |||||||||||||||||
Sbjct: 497 agcaggcggaccgggcgctcctcc 520
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>ref|XM_610118.2| PREDICTED: Bos taurus similar to tetratricopeptide repeat domain 16
            (LOC531619), mRNA
          Length = 2601

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  gcgtgctgctgctcaacaag 255
            ||||||||||||||||||||
Sbjct: 1049 gcgtgctgctgctcaacaag 1068
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>gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, complete sequence
          Length = 172810

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gatgcggcagcaggaggacc 115
              ||||||||||||||||||||
Sbjct: 136220 gatgcggcagcaggaggacc 136201
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>ref|XM_846557.1| PREDICTED: Canis familiaris similar to Kazal-type serine protease
           inhibitor domain 1 (LOC609313), mRNA
          Length = 2688

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 gcgcgggcaggcggcgaggg 406
           ||||||||||||||||||||
Sbjct: 594 gcgcgggcaggcggcgaggg 575
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cggcgtgctgctgctcaaca 253
              ||||||||||||||||||||
Sbjct: 100148 cggcgtgctgctgctcaaca 100129
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>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   cggcgtgctgctgctcaaca 253
             ||||||||||||||||||||
Sbjct: 57355 cggcgtgctgctgctcaaca 57374
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>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   cggcgtgctgctgctcaaca 253
             ||||||||||||||||||||
Sbjct: 63586 cggcgtgctgctgctcaaca 63605
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>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cggcgtgctgctgctcaaca 253
              ||||||||||||||||||||
Sbjct: 200319 cggcgtgctgctgctcaaca 200300
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>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence
          Length = 229700

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   cggcgtgctgctgctcaaca 253
             ||||||||||||||||||||
Sbjct: 63690 cggcgtgctgctgctcaaca 63709
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>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cggcgtgctgctgctcaaca 253
              ||||||||||||||||||||
Sbjct: 197754 cggcgtgctgctgctcaaca 197735
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>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cggcgtgctgctgctcaaca 253
              ||||||||||||||||||||
Sbjct: 162727 cggcgtgctgctgctcaaca 162708
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>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence
          Length = 158759

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gatgcggcagcaggaggacc 115
             ||||||||||||||||||||
Sbjct: 28657 gatgcggcagcaggaggacc 28676
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cggcgtgctgctgctcaaca 253
              ||||||||||||||||||||
Sbjct: 165830 cggcgtgctgctgctcaaca 165811
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     cggcgtgctgctgctcaaca 253
               ||||||||||||||||||||
Sbjct: 4704779 cggcgtgctgctgctcaaca 4704760
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     cggcgtgctgctgctcaaca 253
               ||||||||||||||||||||
Sbjct: 1555113 cggcgtgctgctgctcaaca 1555094
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>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cggcgtgctgctgctcaaca 253
              ||||||||||||||||||||
Sbjct: 163294 cggcgtgctgctgctcaaca 163275
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     gaccaacgcgccggcgccgg 32
              ||||||||||||||||||||
Sbjct: 655529 gaccaacgcgccggcgccgg 655510
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>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete
             sequence
          Length = 184355

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gatgcggcagcaggaggacc 115
             ||||||||||||||||||||
Sbjct: 28527 gatgcggcagcaggaggacc 28546
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 396     ggcggcgagggtggccgtgctggg 419
               ||||||||||||||||||| ||||
Sbjct: 3431856 ggcggcgagggtggccgtgttggg 3431833
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 135     gaccgccgccgggacaccgg 154
               ||||||||||||||||||||
Sbjct: 2855977 gaccgccgccgggacaccgg 2855958
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       gcgccggcgccggccaacca 39
                ||||||||||||||||||||
Sbjct: 25943488 gcgccggcgccggccaacca 25943507
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     ggcgtgctgctgctcaacaa 254
               ||||||||||||||||||||
Sbjct: 2457541 ggcgtgctgctgctcaacaa 2457522
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>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1003_A09
          Length = 150755

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     gcgccggcgccggccaacca 39
              ||||||||||||||||||||
Sbjct: 129275 gcgccggcgccggccaacca 129294
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>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete
              sequence
          Length = 172149

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gatgcggcagcaggaggacc 115
              ||||||||||||||||||||
Sbjct: 154333 gatgcggcagcaggaggacc 154314
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>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1081_B12
          Length = 124741

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    gcgccggcgccggccaacca 39
             ||||||||||||||||||||
Sbjct: 28365 gcgccggcgccggccaacca 28384
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>dbj|AK108208.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D07, full
           insert sequence
          Length = 900

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  gcgccggcgccggccaacca 39
           ||||||||||||||||||||
Sbjct: 473 gcgccggcgccggccaacca 492
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      ccaacgcgccggcgccggcc 34
               ||||||||||||||||||||
Sbjct: 3655008 ccaacgcgccggcgccggcc 3654989


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,027,259
Number of Sequences: 3902068
Number of extensions: 2027259
Number of successful extensions: 49730
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48799
Number of HSP's gapped (non-prelim): 924
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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