>ref|XM_473246.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 648

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 154 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 209
           |||||||||||||| ||||| || |||| ||  ||| |||||||||||||||||||
Sbjct: 22  gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 77

>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 154   gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 209
             |||||||||||||| ||||| || |||| ||  ||| |||||||||||||||||||
Sbjct: 98380 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 98325

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 154      gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 209
                |||||||||||||| ||||| || |||| ||  ||| |||||||||||||||||||
Sbjct: 26321803 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 26321748

>dbj|AK104433.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C06, full
           insert sequence
          Length = 1054

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 154 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 209
           |||||||||||||| ||||| || |||| ||  ||| |||||||||||||||||||
Sbjct: 139 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 194

>dbj|AK099545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A11, full
           insert sequence
          Length = 1073

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 154 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 209
           |||||||||||||| ||||| || |||| ||  ||| |||||||||||||||||||
Sbjct: 140 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 195

>dbj|AK070324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051E03, full
           insert sequence
          Length = 1057

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 154 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 209
           |||||||||||||| ||||| || |||| ||  ||| |||||||||||||||||||
Sbjct: 139 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 194

>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete
             sequence
          Length = 47325

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 127   caacagcaaatggagaaggcag 148
             ||||||||||||||||||||||
Sbjct: 17455 caacagcaaatggagaaggcag 17434

>emb|AL133231.15| Human DNA sequence from clone RP5-867F11 on chromosome 20 Contains the
             TCF15 gene for transcription factor 15 (basic
             helix-loop-helix) and a CpG island, complete sequence
          Length = 50488

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 137   tggagaaggcaggacatgagca 158
             ||||||||||||||||||||||
Sbjct: 14948 tggagaaggcaggacatgagca 14969

>gb|AC163670.3| Mus musculus BAC clone RP23-31C13 from chromosome 12, complete sequence
          Length = 214651

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 9      tccagcaccaacccacacacaa 30
              ||||||||||||||||||||||
Sbjct: 194612 tccagcaccaacccacacacaa 194633

>gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosome 12, complete
             sequence
          Length = 174961

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     tccagcaccaacccacacacaa 30
             ||||||||||||||||||||||
Sbjct: 62150 tccagcaccaacccacacacaa 62171

>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
             complete sequence
          Length = 190731

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 13    gcaccaacccacacacaagcaccaa 37
             |||||||| ||||||||||||||||
Sbjct: 97024 gcaccaacacacacacaagcaccaa 97000

>gb|AC159210.2| Mus musculus BAC clone RP23-54F9 from chromosome 13, complete sequence
          Length = 228429

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 12     agcaccaacccacacacaagcaccaacaa 40
              ||||| |||||||||||||||| ||||||
Sbjct: 206888 agcacaaacccacacacaagcatcaacaa 206916

>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
          Length = 196677

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 112  tccattccaaatttccaacagcaaa 136
            |||||||||||||||||||| ||||
Sbjct: 9376 tccattccaaatttccaacaacaaa 9352

>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone  F9D16 (ESSAII
             project)
          Length = 119430

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 112   tccattccaaatttccaacagcaaa 136
             |||||||||||||||||||| ||||
Sbjct: 67785 tccattccaaatttccaacaacaaa 67761

>gb|AC166074.3| Mus musculus BAC clone RP23-152H18 from chromosome 13, complete sequence
          Length = 224712

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 12     agcaccaacccacacacaagcaccaacaa 40
              ||||| |||||||||||||||| ||||||
Sbjct: 186888 agcacaaacccacacacaagcatcaacaa 186860

>gb|AC084069.28| Mus musculus strain C57BL/6J chromosome 13 clone rp23-257b17,
            complete sequence
          Length = 222775

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 12   agcaccaacccacacacaagcaccaacaa 40
            ||||| |||||||||||||||| ||||||
Sbjct: 1906 agcacaaacccacacacaagcatcaacaa 1934

>ref|XM_773616.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_39_40447_39545) partial mRNA
          Length = 903

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 5   gagctccagcaccaacccacacacaagc 32
           ||||||||| | ||||||||||||||||
Sbjct: 822 gagctccagaaacaacccacacacaagc 849

>emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section 21 of 21): from 4010730 to
              4214630
          Length = 203901

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 115    attccaaatttccaacagcaaatg 138
              ||||||| ||||||||||||||||
Sbjct: 173510 attccaactttccaacagcaaatg 173487

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 162     gatcggcatcccggtcagcagcac 185
               |||| |||||||||||||||||||
Sbjct: 2762935 gatcagcatcccggtcagcagcac 2762958

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 162     gatcggcatcccggtcagca 181
               ||||||||||||||||||||
Sbjct: 3578910 gatcggcatcccggtcagca 3578929

>gb|AF411620.1| Lutzomyia longipalpis clone LIST6012 microsatellite sequence
          Length = 452

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  cacacacaagcaccaacaag 41
           ||||||||||||||||||||
Sbjct: 178 cacacacaagcaccaacaag 159

>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 109    agttccattccaaatttccaacagcaaa 136
              ||||||| ||||||||||||| ||||||
Sbjct: 240493 agttccagtccaaatttccaaaagcaaa 240466

>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold
          Length = 211360

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 109    agttccattccaaatttccaacagcaaa 136
              ||||||| ||||||||||||| ||||||
Sbjct: 163771 agttccagtccaaatttccaaaagcaaa 163744

>emb|AL928805.18| Mouse DNA sequence from clone RP23-291H20 on chromosome 2, complete
              sequence
          Length = 192688

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     caaggaaagaagtcttcggg 104
              ||||||||||||||||||||
Sbjct: 162446 caaggaaagaagtcttcggg 162427

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      caccaacaagccaccagcaa 51
               ||||||||||||||||||||
Sbjct: 3982102 caccaacaagccaccagcaa 3982121

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      caccaacaagccaccagcaa 51
               ||||||||||||||||||||
Sbjct: 3914787 caccaacaagccaccagcaa 3914806

>dbj|D26185.1|BAC180K B. subtilis DNA, 180 kilobase region of replication origin
          Length = 180136

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   attccaaatttccaacagcaaatg 138
             ||||||| ||||||||||||||||
Sbjct: 33211 attccaactttccaacagcaaatg 33188

>emb|AL671905.4| Mouse DNA sequence from clone RP23-239H22 on chromosome X, complete
             sequence
          Length = 140012

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   aggcaggacatgagcatgtg 162
             ||||||||||||||||||||
Sbjct: 78265 aggcaggacatgagcatgtg 78284


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,250,093
Number of Sequences: 3902068
Number of extensions: 2250093
Number of successful extensions: 45645
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45529
Number of HSP's gapped (non-prelim): 116
length of query: 283
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 261
effective length of database: 17,147,199,772
effective search space: 4475419140492
effective search space used: 4475419140492
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)