Clone Information

BLAST Search Result

Clone Name	bart59g11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LBD41_ARATH (Q9M886) LOB domain protein 41	174	6e-44
2	LBD40_ARATH (Q9ZW96) LOB domain protein 40	170	1e-42
3	LBD42_ARATH (Q9CA30) LOB domain protein 42	159	3e-39
4	LBD38_ARATH (Q9SN23) LOB domain protein 38	138	6e-33
5	LBD37_ARATH (Q9FN11) LOB domain protein 37	136	2e-32
6	LBD39_ARATH (Q9SZE8) LOB domain protein 39	131	7e-31
7	LBD10_ARATH (O64836) Putative LOB domain protein 10	51	1e-06
8	ASL2_ARATH (Q9FKZ3) Protein ASYMMETRIC LEAVES2 (LOB domain prote...	50	2e-06
9	LBD11_ARATH (Q9SK08) LOB domain protein 11	45	7e-05
10	LBD1_ARATH (Q9LQR0) LOB domain protein 1	44	2e-04
11	LBD6_ARATH (O04479) LOB domain protein 6 (ASYMMETRIC LEAVES2)	44	2e-04
12	LBD14_ARATH (Q9SJW5) LOB domain protein 14	43	3e-04
13	LBD21_ARATH (Q9SRL8) Putative LOB domain protein 21	42	4e-04
14	LBD15_ARATH (Q8L5T5) LOB domain protein 15	42	6e-04
15	LBD13_ARATH (Q9AT61) LOB domain protein 13	42	6e-04
16	LBD4_ARATH (Q9SHE9) LOB domain protein 4	42	8e-04
17	LBD24_ARATH (P59468) Putative LOB domain protein 24	42	8e-04
18	LBD23_ARATH (P59467) Putative LOB domain protein 23	42	8e-04
19	LBD3_ARATH (Q9SA51) LOB domain protein 3	41	0.001
20	LBD25_ARATH (Q8L8Q3) LOB domain protein 25	41	0.001
21	LBD12_ARATH (Q8LBW3) LOB domain protein 12	41	0.001
22	LOB_ARATH (Q9FML4) Protein LATERAL ORGAN BOUNDARIES	40	0.002
23	LBD31_ARATH (O81322) LOB domain protein 31	40	0.003
24	LBD16_ARATH (Q9SLB7) LOB domain protein 16	39	0.005
25	LBD19_ARATH (O22132) LOB domain protein 19	37	0.014
26	LBD30_ARATH (O81323) LOB domain protein 30	37	0.019
27	LBD28_ARATH (Q9SCS4) Putative LOB domain protein 28	35	0.055
28	LBD33_ARATH (Q9LHS8) LOB domain protein 33	35	0.094
29	LBD29_ARATH (Q9M2J7) LOB domain protein 29	34	0.16
30	LBD35_ARATH (Q9FFL3) Putative LOB domain protein 35	33	0.27
31	LBD20_ARATH (Q9SRV3) LOB domain protein 20	32	0.46
32	LBD18_ARATH (O22131) LOB domain protein 18	32	0.61
33	LBD17_ARATH (Q9SLB6) LOB domain protein 17	32	0.79
34	LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-bind...	30	3.0
35	CO9_ONCMY (P06682) Complement component C9 (Fragment)	30	3.0
36	LTBP2_MOUSE (O08999) Latent transforming growth factor beta-bind...	29	3.9
37	FBIC_STRCO (Q9KZZ7) FO synthase (EC 2.5.1.-) (7,8-didemethyl-8-h...	24	4.9
38	VNUA_PRVKA (P33485) Probable nuclear antigen	29	5.1
39	ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor	28	8.8

>LBD41_ARATH (Q9M886) LOB domain protein 41|
          Length = 263

 Score =  174 bits (442), Expect = 6e-44
 Identities = 84/91 (92%), Positives = 87/91 (95%)
 Frame = +2

Query: 152 MRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDD 331
           MR+SCNGCRVLRKGCSEDCSIRPCL WIKSPEAQANATVFLAKFYGRAGLMNLINAG  +
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAG-PN 59

Query: 332 SLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
            LRPGIFRSLL+EACGRIVNPIYGSVGLLWS
Sbjct: 60  HLRPGIFRSLLHEACGRIVNPIYGSVGLLWS 90

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>LBD40_ARATH (Q9ZW96) LOB domain protein 40|
          Length = 233

 Score =  170 bits (430), Expect = 1e-42
 Identities = 81/91 (89%), Positives = 85/91 (93%)
 Frame = +2

Query: 152 MRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDD 331
           MR+SCNGCRVLRKGCSE+CSIRPCLQWIKS E+QANATVFLAKFYGRAGLMNL+N G  D
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTG-PD 59

Query: 332 SLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
            LRP IFRSLLYEACGRIVNPIYGSVGLLWS
Sbjct: 60  HLRPAIFRSLLYEACGRIVNPIYGSVGLLWS 90

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>LBD42_ARATH (Q9CA30) LOB domain protein 42|
          Length = 233

 Score =  159 bits (401), Expect = 3e-39
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = +2

Query: 152 MRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDD 331
           MR+SCNGCRVLRKGC++DC+IRPCLQWIKS ++QANAT+FLAKFYGRAGL+NLI +G  D
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESG-PD 59

Query: 332 SLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
            LRP IFRSLLYEACGRIVNP+ GSVGL+WS
Sbjct: 60  HLRPAIFRSLLYEACGRIVNPVDGSVGLMWS 90

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>LBD38_ARATH (Q9SN23) LOB domain protein 38|
          Length = 247

 Score =  138 bits (347), Expect = 6e-33
 Identities = 62/89 (69%), Positives = 78/89 (87%)
 Frame = +2

Query: 158 LSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSL 337
           +SCNGCRVLRKGCSE+C +RPC+QWI+SPEAQ +ATVF+AKF+GRAGLM+ I+A   +S 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISA-VPESQ 59

Query: 338 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
            P +F+SLLYEACGR VNP+ G+VGLLW+
Sbjct: 60  CPALFQSLLYEACGRTVNPVNGAVGLLWT 88

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>LBD37_ARATH (Q9FN11) LOB domain protein 37|
          Length = 250

 Score =  136 bits (342), Expect = 2e-32
 Identities = 59/89 (66%), Positives = 78/89 (87%)
 Frame = +2

Query: 158 LSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSL 337
           +SCNGCRVLRKGCSE+C +RPC+QWI++ +AQ +ATVF+AKF+GRAGLM+ I+A   DS 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISA-VPDSQ 59

Query: 338 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
           RP +F+SLLYEACGR VNP+ G++G+LW+
Sbjct: 60  RPALFQSLLYEACGRTVNPVNGAIGMLWT 88

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>LBD39_ARATH (Q9SZE8) LOB domain protein 39|
          Length = 240

 Score =  131 bits (329), Expect = 7e-31
 Identities = 58/89 (65%), Positives = 76/89 (85%)
 Frame = +2

Query: 158 LSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSL 337
           +SCNGCRVLRKGCSE C +RPCLQWI+S E+Q +ATVF+AKF+GRAGLM+ I++   +  
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISS-VPELQ 59

Query: 338 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
           RP +F+SLL+EACGR VNP+ G+VG+LW+
Sbjct: 60  RPALFQSLLFEACGRTVNPVNGAVGMLWT 88

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>LBD10_ARATH (O64836) Putative LOB domain protein 10|
          Length = 311

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 27/85 (31%), Positives = 43/85 (50%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C++LR+ C+++C   P       P       +F+ + +G + +  ++N    D  R 
Sbjct: 6   CAACKLLRRKCTQECVFAPYF-----PPTNPQKFIFVHRVFGASNVTKILNDLPPDQ-RE 59

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL YEA  RI +PIYG VGL+
Sbjct: 60  DTVNSLFYEAEARIRDPIYGCVGLI 84

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>ASL2_ARATH (Q9FKZ3) Protein ASYMMETRIC LEAVES2 (LOB domain protein 36)|
          Length = 313

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 27/85 (31%), Positives = 42/85 (49%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C+++C   P       P  Q     F+ K +G + +  L+N    +  R 
Sbjct: 8   CAACKFLRRKCTQECVFAPYF-----PPDQPQKFAFVHKVFGASNVAKLLNELASNQ-RE 61

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL YEA  R+ +P+YG VGL+
Sbjct: 62  DAVNSLFYEAEARLRDPVYGCVGLI 86

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>LBD11_ARATH (Q9SK08) LOB domain protein 11|
          Length = 229

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = +2

Query: 134 QGPTPTMRLS-CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNL 310
           Q P P + LS C  C++LR+ C++ C + P       P   A  T+   + +G + ++  
Sbjct: 42  QPPQPPVVLSPCAACKILRRRCADKCVLAPYFP----PTDPAKFTI-AHRVFGASNIIKF 96

Query: 311 INAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLW 421
           +     +S R     S++YEA  R+ +P+YG  G ++
Sbjct: 97  LQE-LPESQRTDAVNSMVYEAGARMRDPVYGCAGAIY 132

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>LBD1_ARATH (Q9LQR0) LOB domain protein 1|
          Length = 190

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
 Frame = +2

Query: 113 SSTYTLSQGPTPTMRLS-------CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVF 271
           ++T  +S   +P   LS       C  C++LR+ C+E C + P       P   A  T+ 
Sbjct: 10  ATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFP----PTDPAKFTI- 64

Query: 272 LAKFYGRAGLMNLINAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLW 421
             + +G + ++  +     +S R     S++YEA  RI +P+YG  G ++
Sbjct: 65  AHRVFGASNIIKFLQE-LPESQRTDAVNSMVYEAEARIRDPVYGCAGAIY 113

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>LBD6_ARATH (O04479) LOB domain protein 6 (ASYMMETRIC LEAVES2)|
          Length = 199

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 26/85 (30%), Positives = 39/85 (45%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C  +C   P       P  Q      + K +G + +  L+N     S R 
Sbjct: 10  CAACKFLRRKCQPECVFAPYF-----PPDQPQKFANVHKVFGASNVTKLLNE-LHPSQRE 63

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL YEA  R+ +P+YG VG++
Sbjct: 64  DAVNSLAYEADMRLRDPVYGCVGVI 88

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>LBD14_ARATH (Q9SJW5) LOB domain protein 14|
          Length = 188

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 27/87 (31%), Positives = 42/87 (48%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C GC+ LR+ C E C   P   +    E  ++    + K +G +    LI+   D   R 
Sbjct: 8   CGGCKFLRRKCVEGCVFAPYFCY----EEGSSNFAAIHKVFGASNFSKLISHLPDHD-RC 62

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLLWS 424
              R++ YEA  R+ +PIYG V  ++S
Sbjct: 63  DAVRTISYEAHSRLHDPIYGCVSQIFS 89

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>LBD21_ARATH (Q9SRL8) Putative LOB domain protein 21|
          Length = 165

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = +2

Query: 134 QGPTPTMRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLI 313
           +G  P    SC  C++L++ C+  C   P   + +S +    A V   K +G + +  L+
Sbjct: 2   RGHEPRSSSSCAACKLLKRRCTPTCIFAP---YFRSSDLITFAKVH--KVFGASNVSKLL 56

Query: 314 NAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
               ++  R     SL YEA  R+ +P+YG +G + S
Sbjct: 57  GEVPEEQ-RQETVNSLAYEAEVRLKDPVYGCIGAIAS 92

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>LBD15_ARATH (Q8L5T5) LOB domain protein 15|
          Length = 224

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
 Frame = +2

Query: 137 GPTPTMRL--SCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNL 310
           GP  T+     C  C++LR+ C+++C   P   +    E    A+V   K +G + +  +
Sbjct: 35  GPPGTLNTITPCAACKLLRRRCAQECPFSP---YFSPHEPHKFASVH--KVFGASNVSKM 89

Query: 311 INAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 418
           +     +S R     SL+YEA  R+ +P+YG +G +
Sbjct: 90  LME-VPESQRADAANSLVYEANVRLRDPVYGCMGAI 124

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>LBD13_ARATH (Q9AT61) LOB domain protein 13|
          Length = 268

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 28/94 (29%), Positives = 45/94 (47%)
 Frame = +2

Query: 137 GPTPTMRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLIN 316
           G T      C  C++LR+ C+E+C   P   +    E    A V   K +G + +  ++ 
Sbjct: 44  GTTLNTVTPCAACKLLRRRCAEECPFSP---YFSPHEPHKFAAVH--KVFGASNVSKML- 97

Query: 317 AGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 418
               +S R     SL+YEA  R+ +PIYG +G +
Sbjct: 98  LEVGESQRGDAANSLVYEANLRLRDPIYGCMGAI 131

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>LBD4_ARATH (Q9SHE9) LOB domain protein 4|
          Length = 172

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 25/87 (28%), Positives = 44/87 (50%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C++LR+ C++DC   P   +  + E Q  A V   + +G + +  ++        R 
Sbjct: 14  CAACKLLRRRCAQDCVFSP---YFPADEPQKFANVH--RVFGASNVNKMLQE-LPIHQRG 67

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLLWS 424
               S++YEA  R+ +P+YG VG + S
Sbjct: 68  DAVSSMVYEANARVRDPVYGCVGAISS 94

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>LBD24_ARATH (P59468) Putative LOB domain protein 24|
          Length = 121

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 23/85 (27%), Positives = 37/85 (43%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C +DC   P       P         + + YG   +  ++     D  R 
Sbjct: 6   CAACKYLRRRCPKDCVFSPYF-----PPNDPQKFACVHRIYGAGNVSKMLQQ-LPDQTRA 59

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL +EA  R+ +P+YG VG++
Sbjct: 60  EAVESLCFEAKCRVDDPVYGCVGII 84

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>LBD23_ARATH (P59467) Putative LOB domain protein 23|
          Length = 121

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 23/85 (27%), Positives = 37/85 (43%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C +DC   P       P         + + YG   +  ++     D  R 
Sbjct: 6   CAACKYLRRRCPKDCVFSPYF-----PPNDPQKFACVHRIYGAGNVSKMLQQ-LPDQTRA 59

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL +EA  R+ +P+YG VG++
Sbjct: 60  EAVESLCFEAKCRVDDPVYGCVGII 84

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>LBD3_ARATH (Q9SA51) LOB domain protein 3|
          Length = 165

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +2

Query: 164 CNGCRVLRKGCSED-CSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLR 340
           C GC++LR+ C +D C   P       P  +      + K +G + +  ++   +++  R
Sbjct: 15  CAGCKLLRRKCVKDSCVFAPYF-----PAKEPYKFAIVHKIFGASNVNKMLQELSENH-R 68

Query: 341 PGIFRSLLYEACGRIVNPIYGSVGLLWS 424
                S++YEA  RI +P+YG VG + S
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISS 96

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>LBD25_ARATH (Q8L8Q3) LOB domain protein 25|
          Length = 159

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
 Frame = +2

Query: 98  TKRYSSSTYTLSQGP-TPTMRLS-----------CNGCRVLRKGCSEDCSIRPCLQWIKS 241
           TK+   S   + +GP   T+ L            C  C+ LR+ C+ DC   P       
Sbjct: 6   TKKIKPSQEVIKEGPFLVTIHLKGIYMSNYTNSPCAACKFLRRKCTSDCVFAPYF----- 60

Query: 242 PEAQANATVFLAKFYGRAGLMNLINAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 418
           P  +      + + +G + +  +++       R     SL YEA  R+ +P+YG VG +
Sbjct: 61  PPEEPTKFANVHRIFGASNVSKILHEVAPHQ-REDAVNSLAYEAEARLKDPVYGCVGAI 118

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>LBD12_ARATH (Q8LBW3) LOB domain protein 12|
          Length = 193

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/85 (25%), Positives = 40/85 (47%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C++LR+ C++DC   P       P    +    + K +G + +  ++        R 
Sbjct: 9   CASCKLLRRRCAKDCIFAPYF-----PPDDPHKFAIVHKVFGASNVSKMLQE-LPVHQRA 62

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL++EA  R+ +P+YG VG +
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAI 87

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>LOB_ARATH (Q9FML4) Protein LATERAL ORGAN BOUNDARIES|
          Length = 186

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/85 (28%), Positives = 37/85 (43%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C   C   P       P  + +    + K +G + +  L+N       R 
Sbjct: 12  CAACKFLRRKCMPGCIFAPYF-----PPEEPHKFANVHKIFGASNVTKLLNELLPHQ-RE 65

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLL 418
               SL YEA  R+ +P+YG VG +
Sbjct: 66  DAVNSLAYEAEARVRDPVYGCVGAI 90

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>LBD31_ARATH (O81322) LOB domain protein 31|
          Length = 215

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 26/87 (29%), Positives = 42/87 (48%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C  DC   P   +  S E  ++ T  + K +G +    L+      S R 
Sbjct: 12  CGACKFLRRKCVADCVFAP---YFDSVEGTSHFTA-VHKVFGASNASKLLMM-IPASRRL 66

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLLWS 424
               +L YEA  R+ +P+YG VG +++
Sbjct: 67  DAVVTLTYEALARLRDPVYGCVGHIFA 93

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>LBD16_ARATH (Q9SLB7) LOB domain protein 16|
          Length = 245

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
 Frame = +2

Query: 137 GPTPTMRLSCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLI- 313
           G T      C  C+ LR+ C+ DC   P      S E  A     + K +G + +  L+ 
Sbjct: 7   GTTAGTGSPCGACKFLRRKCASDCIFAPYF----SSEQGAARFAAIHKVFGASNVSKLLL 62

Query: 314 NAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
           N    D     +  ++ YEA  R+ +P+YG V  +++
Sbjct: 63  NVPIHDRCEAVV--TIAYEAQARLHDPVYGCVSHIFA 97

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>LBD19_ARATH (O22132) LOB domain protein 19|
          Length = 191

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLA--KFYGRAGLMNLINAGTDDSL 337
           C  C+ LR+ C + C   P        +A+     F A  K +G +    ++       L
Sbjct: 17  CGACKFLRRKCVKGCVFAPYF------DAEQGTARFAAVHKVFGASNASKML-------L 63

Query: 338 RPGIFR------SLLYEACGRIVNPIYGSVGLLWS 424
           R  + +      +L YEA  RI +P+YGSVG L+S
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFS 98

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>LBD30_ARATH (O81323) LOB domain protein 30|
          Length = 228

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLA--KFYGRAGLMNLINAGTDDSL 337
           C  C+ LR+ C   C   P        +++  A  F A  K +G + +  L++    +  
Sbjct: 18  CGACKFLRRKCVAGCIFAPYF------DSEQGAAHFAAVHKVFGASNVSKLLHH-VPEHK 70

Query: 338 RPGIFRSLLYEACGRIVNPIYGSV 409
           RP    S+ +EA  R+ +PIYG V
Sbjct: 71  RPDAVVSICFEAQARLRDPIYGCV 94

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>LBD28_ARATH (Q9SCS4) Putative LOB domain protein 28|
          Length = 198

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 23/87 (26%), Positives = 42/87 (48%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C+EDC   P     K    +A     + K +G + +  LIN+      R 
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEA-----VHKVFGASHVATLINS-LHPCQRE 66

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLLWS 424
               +L +EA  +  +P+ G +G++++
Sbjct: 67  FAMDTLAWEAQVQANDPVNGCLGIIYN 93

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>LBD33_ARATH (Q9LHS8) LOB domain protein 33|
          Length = 177

 Score = 34.7 bits (78), Expect = 0.094
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +2

Query: 161 SCNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGL-MNLINAGTDDSL 337
           SC  C+ LR+ C+ DC   P   +    E  ++    + K +G + +  +L++       
Sbjct: 7   SCGACKFLRRKCNRDCVFSPYFSY----EQASSHFAAVHKVFGASNVSKHLLHLPQHQRN 62

Query: 338 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
              I  ++ YEA  R+ +P+YG V  +++
Sbjct: 63  IAAI--TISYEALSRMRDPVYGCVAHIFA 89

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>LBD29_ARATH (Q9M2J7) LOB domain protein 29|
          Length = 218

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLIN-AGTDDSLR 340
           C  C+ LR+ C++ C   P        E  A+    + K +G +    L++     D   
Sbjct: 12  CGACKFLRRKCAKGCVFAPYF----CHEQGASHFAAIHKVFGASNASKLLSHLPISDRCE 67

Query: 341 PGIFRSLLYEACGRIVNPIYGSVGLLWS 424
             I  ++ YEA  R+ +PIYG V  +++
Sbjct: 68  AAI--TISYEAQARLQDPIYGCVSHIFA 93

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>LBD35_ARATH (Q9FFL3) Putative LOB domain protein 35|
          Length = 206

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 21/84 (25%), Positives = 36/84 (42%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C+ C+V++  C+ +C   P       P         L + +G   +  ++ A  D   R 
Sbjct: 6   CSACKVMKCDCAPNCIFAPHF-----PLTNLETFERLHRIFGAGNVFKIL-ANLDPIQRE 59

Query: 344 GIFRSLLYEACGRIVNPIYGSVGL 415
               +L YEA     +PI+G VG+
Sbjct: 60  TAVNALCYEAEALERDPIFGCVGI 83

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>LBD20_ARATH (Q9SRV3) LOB domain protein 20|
          Length = 273

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
 Frame = +2

Query: 98  TKRYSSSTYTLSQGPTPTMRLS-CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFL 274
           T   SS   +++   T T   S C  C+ LR+ C   C   P        +  A     +
Sbjct: 29  TSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHF----GSDQGAARFAAV 84

Query: 275 AKFYGRAGLMNLINAGTDDSLRPGIFRSLLYEACGRIVNPIYGSVGLL 418
            K +G + +  L++    +     +  ++ YEA  R+ +P+YG V  +
Sbjct: 85  HKVFGASNVSKLLHHIPVNRRHDAVV-TISYEAQARLSDPVYGCVSTI 131

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>LBD18_ARATH (O22131) LOB domain protein 18|
          Length = 262

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLA--KFYGRAGLMNLINAGTDDSL 337
           C  C+ LR+ C   C   P        +++  +  F A  K +G + +  L+        
Sbjct: 38  CGACKFLRRKCVPGCIFAPYF------DSEQGSAYFAAVHKVFGASNVSKLL-LHIPVHR 90

Query: 338 RPGIFRSLLYEACGRIVNPIYGSVGLLWS 424
           R     ++ YEA  RI +PIYG V  +++
Sbjct: 91  RSDAVVTICYEAQARIRDPIYGCVAHIFA 119

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>LBD17_ARATH (Q9SLB6) LOB domain protein 17|
          Length = 244

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = +2

Query: 164 CNGCRVLRKGCSEDCSIRPCLQWIKSPEAQANATVFLAKFYGRAGLMNLINAGTDDSLRP 343
           C  C+ LR+ C + C   P        E  A+    + + +G +    L++    +  R 
Sbjct: 8   CGACKFLRRRCVKGCVFAPYF----CHEQGASHFAAIHQVFGASNASKLLSHLPMEDRRE 63

Query: 344 GIFRSLLYEACGRIVNPIYGSVGLLWS 424
               ++ YEA  R  +PIYG V  ++S
Sbjct: 64  AA-TTIYYEAQARRQDPIYGCVSHIFS 89

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>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1842

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 211 HPPLPAVDQEPRGAGQRHRLP 273
           H P P +DQEP   G RHR P
Sbjct: 416 HLPAPRLDQEPPERGPRHRAP 436

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>CO9_ONCMY (P06682) Complement component C9 (Fragment)|
          Length = 574

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 110 SSSTYTLSQGPTPTMRLSCNGCRVLRKGCSEDCS--IRPC 223
           SS  +T   G    +RLSCNG      G  EDC    +PC
Sbjct: 80  SSIEFTCESGACIKLRLSCNGDYDCEDGSDEDCEPVRKPC 119

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>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1813

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 211 HPPLPAVDQEPRGAGQRHR 267
           H P+P  D+EP G G RHR
Sbjct: 413 HLPVPQPDREPAGRGSRHR 431

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>FBIC_STRCO (Q9KZZ7) FO synthase (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase)
          Length = 867

 Score = 24.3 bits (51), Expect(2) = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 306 FMSPARP*NLARKTVALACASGLL 235
           FMSP    ++ARK  AL C   L+
Sbjct: 113 FMSPDEVLDIARKGAALGCKEALI 136



 Score = 23.1 bits (48), Expect(2) = 4.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 358 RAEDAGAEAVVRPGV 314
           R  DAG EA  RPGV
Sbjct: 60  RVRDAGLEAAGRPGV 74

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +1

Query: 211 HPPLPAVDQEPRGAGQRHRLPRQVLRPRGAHEPHQRR 321
           HPP P  D       + HR PR  L P      HQ R
Sbjct: 72  HPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDHQHR 108

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>ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor|
          Length = 1612

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 33  LLSSPSSFWLCRFACLCSKSRAPRDTHPAR 122
           +++ P+ F+L    CLCS SR  ++  P R
Sbjct: 1   MIAEPAHFYLFGLICLCSGSRLRQEDFPPR 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,816,344
Number of Sequences: 219361
Number of extensions: 766927
Number of successful extensions: 2776
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result