ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59g11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 276 bits (139), Expect = 6e-71 Identities = 240/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 151 gatgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcag 210 ||||||| | || |||||||| ||||| |||||||| ||||| |||||||| | |||| Sbjct: 17973269 gatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggtgcac 17973210 Query: 211 catccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtctt 270 |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 17973209 catccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccgtctt 17973150 Query: 271 cctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgggacggacga 330 |||||||||||||||||||||||| ||||| | ||||| || |||||| | ||| | Sbjct: 17973149 cctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctgacca 17973090 Query: 331 cagcctccgccccggcatcttccgctcgctcctctacgaggcctgcggccggatcgtcaa 390 ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 17973089 ---cctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtcaa 17973033 Query: 391 ccccatctacggctccgtcggcctgctctggtc 423 ||| ||||||||||||||||||||||||||||| Sbjct: 17973032 cccgatctacggctccgtcggcctgctctggtc 17973000 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 152 atgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagc 211 |||||| | ||||||||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 1656376 atgcggatgagctgcaacgggtgccgcgtgctgcgcaaggggtgcagcgacaactgcgcc 1656435 Query: 212 atccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttc 271 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1656436 atccgcccctgcctgcagtggattcgcagccccgatgcgcaggccaacgccaccgtcttc 1656495 Query: 272 ctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgg 321 ||||||||||||||||||||||| || ||||| |||||||||| |||||| Sbjct: 1656496 ctcgccaagttctacggccgcgccggcctcatcaacctcatcaccgccgg 1656545 Score = 44.1 bits (22), Expect = 0.36 Identities = 61/74 (82%) Strand = Plus / Plus Query: 350 ttccgctcgctcctctacgaggcctgcggccggatcgtcaaccccatctacggctccgtc 409 ||||| ||||| || |||||||| ||||| ||||| | ||||| | ||||| |||||| Sbjct: 1656660 ttccggtcgctgctgtacgaggcttgcgggcggatgctgaacccggtgtacggatccgtc 1656719 Query: 410 ggcctgctctggtc 423 ||||| |||||||| Sbjct: 1656720 ggcctcctctggtc 1656733 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 |||||||||||||||| |||||||| Sbjct: 18193913 cctctcctctcctctctctcttcct 18193937 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 tctacggccgcgcggggctcatga 305 ||||||||||||| |||||||||| Sbjct: 13154569 tctacggccgcgccgggctcatga 13154546 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 tctacggccgcgcggggctcatga 305 ||||||||||||| |||||||||| Sbjct: 13123155 tctacggccgcgccgggctcatga 13123178 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 9346044 cctctcctctcctctccctc 9346025
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 276 bits (139), Expect = 6e-71 Identities = 240/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 151 gatgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcag 210 ||||||| | || |||||||| ||||| |||||||| ||||| |||||||| | |||| Sbjct: 510 gatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggtgcac 451 Query: 211 catccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtctt 270 |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 450 catccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccgtctt 391 Query: 271 cctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgggacggacga 330 |||||||||||||||||||||||| ||||| | ||||| || |||||| | ||| | Sbjct: 390 cctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctgacca 331 Query: 331 cagcctccgccccggcatcttccgctcgctcctctacgaggcctgcggccggatcgtcaa 390 ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 330 ---cctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtcaa 274 Query: 391 ccccatctacggctccgtcggcctgctctggtc 423 ||| ||||||||||||||||||||||||||||| Sbjct: 273 cccgatctacggctccgtcggcctgctctggtc 241
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 276 bits (139), Expect = 6e-71 Identities = 240/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 151 gatgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcag 210 ||||||| | || |||||||| ||||| |||||||| ||||| |||||||| | |||| Sbjct: 93104 gatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggtgcac 93045 Query: 211 catccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtctt 270 |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 93044 catccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccgtctt 92985 Query: 271 cctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgggacggacga 330 |||||||||||||||||||||||| ||||| | ||||| || |||||| | ||| | Sbjct: 92984 cctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctgacca 92925 Query: 331 cagcctccgccccggcatcttccgctcgctcctctacgaggcctgcggccggatcgtcaa 390 ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 92924 ---cctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtcaa 92868 Query: 391 ccccatctacggctccgtcggcctgctctggtc 423 ||| ||||||||||||||||||||||||||||| Sbjct: 92867 cccgatctacggctccgtcggcctgctctggtc 92835
>ref|NM_193762.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 274 bits (138), Expect = 2e-70 Identities = 230/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 164 tgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccctgc 223 |||||||| ||||| |||||||| ||||| |||||||| | |||| |||||| || ||| Sbjct: 13 tgcaacggttgccgggtgctgcgcaagggatgcagcgaagggtgcaccatccgtccgtgc 72 Query: 224 ctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaagttc 283 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ctgcagtggatcaagacccccgaggcgcaggccaacgccaccgtcttcctcgccaagttc 132 Query: 284 tacggccgcgcggggctcatgaacctcatcaacgccgggacggacgacagcctccgcccc 343 ||||||||||| ||||| | ||||| || |||||| | ||| | |||||||||| Sbjct: 133 tacggccgcgccgggcttctcaacctgctcgctgccgggcctgacca---cctccgcccc 189 Query: 344 ggcatcttccgctcgctcctctacgaggcctgcggccggatcgtcaaccccatctacggc 403 | | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 190 gccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtcaacccgatctacggc 249 Query: 404 tccgtcggcctgctctggtc 423 |||||||||||||||||||| Sbjct: 250 tccgtcggcctgctctggtc 269
>dbj|AK071246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C07, full insert sequence Length = 1416 Score = 268 bits (135), Expect = 1e-68 Identities = 239/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 151 gatgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcag 210 ||||||| | || |||||||| ||||| |||||||| ||||| |||||||| | |||| Sbjct: 169 gatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggtgcac 228 Query: 211 catccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtctt 270 |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 229 catccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccgtctt 288 Query: 271 cctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgggacggacga 330 |||||||||||||||||||||||| ||||| | ||||| || |||||| | ||| | Sbjct: 289 cctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctgacca 348 Query: 331 cagcctccgccccggcatcttccgctcgctcctctacgaggcctgcggccggatcgtcaa 390 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 349 ---cctccgccccgcggtcttccgctcgctcctctacgaggcctgcggccgcatcgtcaa 405 Query: 391 ccccatctacggctccgtcggcctgctctggtc 423 ||| ||||||||||||||||||||||||||||| Sbjct: 406 cccgatctacggctccgtcggcctgctctggtc 438
>ref|NM_184224.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 152 atgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagc 211 |||||| | ||||||||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 1 atgcggatgagctgcaacgggtgccgcgtgctgcgcaaggggtgcagcgacaactgcgcc 60 Query: 212 atccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttc 271 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 61 atccgcccctgcctgcagtggattcgcagccccgatgcgcaggccaacgccaccgtcttc 120 Query: 272 ctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgg 321 ||||||||||||||||||||||| || ||||| |||||||||| |||||| Sbjct: 121 ctcgccaagttctacggccgcgccggcctcatcaacctcatcaccgccgg 170 Score = 44.1 bits (22), Expect = 0.36 Identities = 61/74 (82%) Strand = Plus / Plus Query: 350 ttccgctcgctcctctacgaggcctgcggccggatcgtcaaccccatctacggctccgtc 409 ||||| ||||| || |||||||| ||||| ||||| | ||||| | ||||| |||||| Sbjct: 196 ttccggtcgctgctgtacgaggcttgcgggcggatgctgaacccggtgtacggatccgtc 255 Query: 410 ggcctgctctggtc 423 ||||| |||||||| Sbjct: 256 ggcctcctctggtc 269
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 152 atgcggcttagctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagc 211 |||||| | ||||||||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 93607 atgcggatgagctgcaacgggtgccgcgtgctgcgcaaggggtgcagcgacaactgcgcc 93666 Query: 212 atccgcccctgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttc 271 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 93667 atccgcccctgcctgcagtggattcgcagccccgatgcgcaggccaacgccaccgtcttc 93726 Query: 272 ctcgccaagttctacggccgcgcggggctcatgaacctcatcaacgccgg 321 ||||||||||||||||||||||| || ||||| |||||||||| |||||| Sbjct: 93727 ctcgccaagttctacggccgcgccggcctcatcaacctcatcaccgccgg 93776 Score = 44.1 bits (22), Expect = 0.36 Identities = 61/74 (82%) Strand = Plus / Plus Query: 350 ttccgctcgctcctctacgaggcctgcggccggatcgtcaaccccatctacggctccgtc 409 ||||| ||||| || |||||||| ||||| ||||| | ||||| | ||||| |||||| Sbjct: 93891 ttccggtcgctgctgtacgaggcttgcgggcggatgctgaacccggtgtacggatccgtc 93950 Query: 410 ggcctgctctggtc 423 ||||| |||||||| Sbjct: 93951 ggcctcctctggtc 93964
>ref|XM_478944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 962 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 |||||||||||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 49 agctgcaacggctgccgcgtgctgcggaaggggtgcagcgaggggtgcgtgttgcggccg 108 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | || |||||||||||| | |||||||||| ||| |||||||| Sbjct: 109 tgcctgcagtggatcgacggcgccgaggcgcagggccacgccaccgtgttcgtcgccaag 168 Query: 281 ttctacggccgcgcggggctcatg 304 |||| |||||||| || |||||| Sbjct: 169 ttctttggccgcgccggcctcatg 192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 |||||||||||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 23942982 agctgcaacggctgccgcgtgctgcggaaggggtgcagcgaggggtgcgtgttgcggccg 23943041 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | || |||||||||||| | |||||||||| ||| |||||||| Sbjct: 23943042 tgcctgcagtggatcgacggcgccgaggcgcagggccacgccaccgtgttcgtcgccaag 23943101 Query: 281 ttctacggccgcgcggggctcatg 304 |||| |||||||| || |||||| Sbjct: 23943102 ttctttggccgcgccggcctcatg 23943125 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 18832815 cctctcctctcctctccctct 18832795 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 acccctctcctctcctctcc 46 |||||||||||||||||||| Sbjct: 21907867 acccctctcctctcctctcc 21907848 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccc 47 |||||||||||||||||||| Sbjct: 8234085 cccctctcctctcctctccc 8234104
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 |||||||||||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 97909 agctgcaacggctgccgcgtgctgcggaaggggtgcagcgaggggtgcgtgttgcggccg 97968 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | || |||||||||||| | |||||||||| ||| |||||||| Sbjct: 97969 tgcctgcagtggatcgacggcgccgaggcgcagggccacgccaccgtgttcgtcgccaag 98028 Query: 281 ttctacggccgcgcggggctcatg 304 |||| |||||||| || |||||| Sbjct: 98029 ttctttggccgcgccggcctcatg 98052
>dbj|AK069813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F23, full insert sequence Length = 962 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 |||||||||||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 49 agctgcaacggctgccgcgtgctgcggaaggggtgcagcgaggggtgcgtgttgcggccg 108 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | || |||||||||||| | |||||||||| ||| |||||||| Sbjct: 109 tgcctgcagtggatcgacggcgccgaggcgcagggccacgccaccgtgttcgtcgccaag 168 Query: 281 ttctacggccgcgcggggctcatg 304 |||| |||||||| || |||||| Sbjct: 169 ttctttggccgcgccggcctcatg 192
>dbj|AP006376.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT23D08, TM0220, complete sequence Length = 70687 Score = 107 bits (54), Expect = 3e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 164 tgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccctgc 223 |||||||| ||| | ||||| || || || ||||| ||| | ||||||||| | ||||| Sbjct: 50215 tgcaacggatgcagggtgctccgaaaaggttgcagtgagaattgcagcatcagaccctgt 50156 Query: 224 ctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaagttc 283 ||||||||||||||||||| || | || || ||||||||||||||||||||||||||| Sbjct: 50155 ttgcagtggatcaagagccctgaatctcaagcaaacgccaccgtcttcctcgccaagttc 50096 Query: 284 tacggccgcgcggggctcatgaacctcatcaacgccgg 321 || ||||| || || |||||||||||| ||||| |||| Sbjct: 50095 tatggccgtgctggcctcatgaacctcgtcaactccgg 50058
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 241 ccccgaggcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggct 300 |||||| || ||||||||||| || ||||| |||||||||||||||||||| || || || Sbjct: 132689 ccccgacgctcaggccaacgctactgtctttctcgccaagttctacggccgtgccggtct 132630 Query: 301 catgaacctcatcaacgccgg 321 ||||||||||||||||||||| Sbjct: 132629 catgaacctcatcaacgccgg 132609
>ref|NM_105380.2| Arabidopsis thaliana unknown protein AT1G67100 mRNA, complete cds Length = 929 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 254 gccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaacctcatc 313 ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 145 gccaacgccaccgtcttcctcgccaagttttatggccgtgcggggctcatgaacctcctc 204 Query: 314 aacgccgg 321 ||| |||| Sbjct: 205 aacaccgg 212
>gb|BT011650.1| Arabidopsis thaliana At1g67100 mRNA, complete cds Length = 702 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 254 gccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaacctcatc 313 ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 103 gccaacgccaccgtcttcctcgccaagttttatggccgtgcggggctcatgaacctcctc 162 Query: 314 aacgccgg 321 ||| |||| Sbjct: 163 aacaccgg 170
>gb|BT010943.1| Arabidopsis thaliana At1g67100 gene, complete cds Length = 804 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 254 gccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaacctcatc 313 ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 145 gccaacgccaccgtcttcctcgccaagttttatggccgtgcggggctcatgaacctcctc 204 Query: 314 aacgccgg 321 ||| |||| Sbjct: 205 aacaccgg 212
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 254 gccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaacctcatc 313 ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 83606 gccaacgccaccgtcttcctcgccaagttttatggccgtgcggggctcatgaacctcctc 83665 Query: 314 aacgccgg 321 ||| |||| Sbjct: 83666 aacaccgg 83673
>gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence Length = 101933 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 254 gccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaacctcatc 313 ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 7495 gccaacgccaccgtcttcctcgccaagttttatggccgtgcggggctcatgaacctcctc 7554 Query: 314 aacgccgg 321 ||| |||| Sbjct: 7555 aacaccgg 7562
>gb|AC105743.8| Oryza sativa chromosome 3 BAC OSJNBa0035N15 genomic sequence, complete sequence Length = 171120 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 ||||||||||| ||||| |||||||||||||| ||||| || | |||| | || || Sbjct: 29739 agctgcaacggttgccgggtgctgcggaaggggtgcagtgacggctgcgtgctgcggcca 29798 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | | |||| ||||||| | |||||||||||||| |||||||| Sbjct: 29799 tgcctgcagtggatcgacgccgccgacgcgcagggccacgccaccgtcttcgtcgccaag 29858 Query: 281 ttctacggccgcgc 294 |||| ||||||||| Sbjct: 29859 ttcttcggccgcgc 29872
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 ||||||||||| ||||| |||||||||||||| ||||| || | |||| | || || Sbjct: 18748146 agctgcaacggttgccgggtgctgcggaaggggtgcagtgacggctgcgtgctgcggcca 18748087 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | | |||| ||||||| | |||||||||||||| |||||||| Sbjct: 18748086 tgcctgcagtggatcgacgccgccgacgcgcagggccacgccaccgtcttcgtcgccaag 18748027 Query: 281 ttctacggccgcgc 294 |||| ||||||||| Sbjct: 18748026 ttcttcggccgcgc 18748013 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 249 cgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgc 294 ||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 22787457 cgcaggccaacgccaccgtcttcgtcgccaagttcttcggccgcgc 22787412 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcga 201 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 22787545 agctgcaacgggtgccgcgtgctgcggaaggggtgcagcga 22787505 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ccacccctctcctctcctctcc 46 |||||||||||||||||||||| Sbjct: 12558814 ccacccctctcctctcctctcc 12558835 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 26252470 cctctcctctcctctccctct 26252450 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 34766323 cctctcctctcctctccctc 34766304 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 11432797 cctctcctctcctctccctc 11432778 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gaggcgcaggccaacgccaccgtc 268 |||||| ||||||||||||||||| Sbjct: 10571766 gaggcggaggccaacgccaccgtc 10571789 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 8867556 cctctcctctcctctccctc 8867537
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 ||||||||||| ||||| |||||||||||||| ||||| || | |||| | || || Sbjct: 18742187 agctgcaacggttgccgggtgctgcggaaggggtgcagtgacggctgcgtgctgcggcca 18742128 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | | |||| ||||||| | |||||||||||||| |||||||| Sbjct: 18742127 tgcctgcagtggatcgacgccgccgacgcgcagggccacgccaccgtcttcgtcgccaag 18742068 Query: 281 ttctacggccgcgc 294 |||| ||||||||| Sbjct: 18742067 ttcttcggccgcgc 18742054 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 249 cgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgc 294 ||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 22780485 cgcaggccaacgccaccgtcttcgtcgccaagttcttcggccgcgc 22780440 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcga 201 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 22780573 agctgcaacgggtgccgcgtgctgcggaaggggtgcagcga 22780533 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ccacccctctcctctcctctcc 46 |||||||||||||||||||||| Sbjct: 12555577 ccacccctctcctctcctctcc 12555598 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 26343779 cctctcctctcctctccctct 26343759 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 34856395 cctctcctctcctctccctc 34856376 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 11429560 cctctcctctcctctccctc 11429541 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gaggcgcaggccaacgccaccgtc 268 |||||| ||||||||||||||||| Sbjct: 10569867 gaggcggaggccaacgccaccgtc 10569890 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 8865391 cctctcctctcctctccctc 8865372
>dbj|AK071624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106M18, full insert sequence Length = 1012 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcgaggactgcagcatccgcccc 220 ||||||||||| ||||| |||||||||||||| ||||| || | |||| | || || Sbjct: 119 agctgcaacggttgccgggtgctgcggaaggggtgcagtgacggctgcgtgctgcggcca 178 Query: 221 tgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgccaag 280 ||||||||||||||| | | |||| ||||||| | |||||||||||||| |||||||| Sbjct: 179 tgcctgcagtggatcgacgccgccgacgcgcagggccacgccaccgtcttcgtcgccaag 238 Query: 281 ttctacggccgcgc 294 |||| ||||||||| Sbjct: 239 ttcttcggccgcgc 252
>gb|AY208877.1| Brassica napus seed specific protein Bn15D17A mRNA, complete cds Length = 1097 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| ||||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 197 gcgcaagcaaacgcaaccgtgtttctcgccaagttctatggccgcgctggactcatgaac 256 Query: 308 ctcatcaacgc 318 ||||||||||| Sbjct: 257 ctcatcaacgc 267
>ref|NM_111122.4| Arabidopsis thaliana unknown protein AT3G02550 mRNA, complete cds Length = 1382 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 445 gcgcaagctaacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaac 504 Query: 308 ctcatcaacgccgg 321 |||||||||||||| Sbjct: 505 ctcatcaacgccgg 518
>ref|XM_463149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 249 cgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgc 294 ||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 317 cgcaggccaacgccaccgtcttcgtcgccaagttcttcggccgcgc 362 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcga 201 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 229 agctgcaacgggtgccgcgtgctgcggaaggggtgcagcga 269
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04 map S1466, complete sequence Length = 140012 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 249 cgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgc 294 ||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 57388 cgcaggccaacgccaccgtcttcgtcgccaagttcttcggccgcgc 57343 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 161 agctgcaacggctgccgcgtgctgcggaagggctgcagcga 201 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 57476 agctgcaacgggtgccgcgtgctgcggaaggggtgcagcga 57436
>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete sequence Length = 103904 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 53195 gcgcaagctaacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaac 53136 Query: 308 ctcatcaacgccgg 321 |||||||||||||| Sbjct: 53135 ctcatcaacgccgg 53122
>gb|AY122896.1| Arabidopsis thaliana AT3g02550/F16B3_18 mRNA, complete cds Length = 792 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 97 gcgcaagctaacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaac 156 Query: 308 ctcatcaacgccgg 321 |||||||||||||| Sbjct: 157 ctcatcaacgccgg 170
>gb|AF447895.1| Arabidopsis thaliana LOB DOMAIN 41 (LBD41) mRNA, complete cds Length = 1217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 310 gcgcaagctaacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaac 369 Query: 308 ctcatcaacgccgg 321 |||||||||||||| Sbjct: 370 ctcatcaacgccgg 383
>gb|AY090370.1| Arabidopsis thaliana AT3g02550/F16B3_18 mRNA, complete cds Length = 1190 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 284 gcgcaagctaacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaac 343 Query: 308 ctcatcaacgccgg 321 |||||||||||||| Sbjct: 344 ctcatcaacgccgg 357
>gb|AY086061.1| Arabidopsis thaliana clone 20907 mRNA, complete sequence Length = 1110 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 248 gcgcaggccaacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaac 307 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 227 gcgcaagctaacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaac 286 Query: 308 ctcatcaacgccgg 321 |||||||||||||| Sbjct: 287 ctcatcaacgccgg 300
>emb|BX822366.1|CNS0A7A2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZA03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1211 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 257 aacgccaccgtcttcctcgccaagttctacggccgcgcggggctcatgaacctcatcaac 316 ||||| || ||||| |||||||||||||| ||||| || || |||||||||||||||||| Sbjct: 455 aacgcaactgtctttctcgccaagttctatggccgtgctggactcatgaacctcatcaac 514 Query: 317 gccgg 321 ||||| Sbjct: 515 gccgg 519
>emb|BX816029.1|CNS0ABR9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1292 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/57 (89%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 254 gccaacgccaccgtcttcctcgccaagttctacggcc--gcgcggggctcatgaacc 308 ||||||||||||||||||||||||||||| | |||| ||| |||||||||||||| Sbjct: 551 gccaacgccaccgtcttcctcgccaagttttgtggccgtgcggggggctcatgaacc 607
>dbj|AP006432.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14C18, TM0330, complete sequence Length = 109258 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 258 acgccaccgtcttcctcgccaagttctacggccgcgcggggctcatg 304 |||||||||||||| ||||||| |||| ||||||||| || |||||| Sbjct: 47899 acgccaccgtcttcgtcgccaaattcttcggccgcgccggtctcatg 47853
>gb|AC115885.29| Mus musculus chromosome 3, clone RP24-396D16, complete sequence Length = 186636 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcctt 55 |||||||||||||||||||||||||| Sbjct: 105578 cctctcctctcctctccctcttcctt 105553
>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence Length = 216612 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctcttccttct 57 |||||||||||||||||||||| |||||| Sbjct: 168400 ccctctcctctcctctccctctcccttct 168428
>gb|AC124083.14| Mus musculus chromosome 5, clone RP24-400H4, complete sequence Length = 172336 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcc 53 |||||||||||||||||||||||| Sbjct: 31561 cctctcctctcctctccctcttcc 31584
>gb|AC124113.9| Mus musculus chromosome 5, clone RP24-354P12, complete sequence Length = 156826 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcc 53 |||||||||||||||||||||||| Sbjct: 25609 cctctcctctcctctccctcttcc 25586
>gb|AC166997.1| Mus musculus BAC clone RP23-107H9 from chromosome 14, complete sequence Length = 201316 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttccttct 57 |||||||||||||||||||| ||||||| Sbjct: 75828 cctctcctctcctctccctcctccttct 75801
>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence Length = 184349 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccctcttcctt 55 ||||||||||||||||||| |||||||| Sbjct: 176448 cccctctcctctcctctccttcttcctt 176475
>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence Length = 225841 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcc 53 |||||||||||||||||||||||| Sbjct: 168882 cctctcctctcctctccctcttcc 168859
>gb|AC122752.10| Mus musculus chromosome 8, clone RP24-358A6, complete sequence Length = 155477 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 127072 cctctcctctcctctccctcttc 127050
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctcttcct 54 ||||||||||||||||| ||||||||| Sbjct: 120720 cccctctcctctcctcttcctcttcct 120694
>gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 map 10, complete sequence Length = 194193 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 176181 cctctcctctcctctccctcttc 176203
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 56061 cctctcctctcctctccctcttc 56039
>gb|AC183664.3| Pan troglodytes BAC clone CH251-645D10 from chromosome 12, complete sequence Length = 176676 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctcttcct 54 |||||||||||||||||| |||||||| Sbjct: 17638 cccctctcctctcctctctctcttcct 17612
>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete sequence Length = 209276 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctct 50 ||||||||||||||||||||||| Sbjct: 141536 cccctctcctctcctctccctct 141514
>gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, complete sequence Length = 209836 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 158608 cctctcctctcctctccctcttc 158586
>gb|AC159623.3| Mus musculus BAC clone RP24-308O7 from chromosome 12, complete sequence Length = 165043 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ccacccctctcctctcctctccc 47 ||||||||||||||||||||||| Sbjct: 93929 ccacccctctcctctcctctccc 93907
>gb|AC026398.5| Homo sapiens chromosome 5 clone CTB-127M13, complete sequence Length = 88783 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttccttc 56 ||||||||||||||| ||||||||||| Sbjct: 59246 cctctcctctcctctacctcttccttc 59220
>gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clone BAC djn082c10 containing GABRG2 gene, complete sequence Length = 195909 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 94866 cctctcctctcctctccctcttc 94844
>emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chromosome 2, complete sequence Length = 224044 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctcttcctt 55 ||||||||||| ||||||||||||||| Sbjct: 221562 ccctctcctcttctctccctcttcctt 221588
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctct 50 ||||||||||||||||||||||| Sbjct: 83537 cccctctcctctcctctccctct 83515
>gb|AC153573.3| Mus musculus 10 BAC RP23-167K15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200011 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 176161 cctctcctctcctctccctcttc 176139
>emb|AL671117.6| Mouse DNA sequence from clone RP23-278L4 on chromosome X, complete sequence Length = 209799 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 tctcctctcctctccctcttcct 54 ||||||||||||||||||||||| Sbjct: 200599 tctcctctcctctccctcttcct 200621 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 151827 cctctcctctcctctccctct 151847
>emb|AL607123.22| Mouse DNA sequence from clone RP23-391E6 on chromosome 4, complete sequence Length = 149369 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 142813 cctctcctctcctctccctcttc 142791
>emb|AL606909.12| Mouse DNA sequence from clone RP23-133N19 on chromosome 4, complete sequence Length = 105830 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttc 52 ||||||||||||||||||||||| Sbjct: 93318 cctctcctctcctctccctcttc 93340
>emb|AL645688.12| Mouse DNA sequence from clone RP23-54N20 on chromosome 11, complete sequence Length = 123115 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctct 50 ||||||||||||||||||||||| Sbjct: 53009 cccctctcctctcctctccctct 52987
>ref|NM_114854.1| Arabidopsis thaliana unknown protein AT3G49940 mRNA, complete cds Length = 1039 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 acgccaccgtcttcctcgccaagttctacggccg 291 |||||||||||||| |||| ||||||| |||||| Sbjct: 223 acgccaccgtcttcgtcgctaagttcttcggccg 256
>gb|AC102315.9| Mus musculus chromosome 3, clone RP24-441C20, complete sequence Length = 150755 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ctcctctcctctccctcttcct 54 |||||||||||||||||||||| Sbjct: 72024 ctcctctcctctccctcttcct 72045
>gb|AC101715.8| Mus musculus chromosome 1, clone RP23-283P17, complete sequence Length = 148387 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 70418 cctctcctctcctctccctctt 70397
>gb|AC117570.11| Mus musculus chromosome 9, clone RP23-18M12, complete sequence Length = 238598 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 193228 ccctctcctctcctctccctct 193207
>gb|AF287957.6| Homo sapiens chromosome 8 clone CTD-2541M15 map p23.1, complete sequence Length = 168136 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccctcttccttct 57 ||||||||||||||||||| ||||||||| Sbjct: 56309 cccctctcctctcctctcctccttccttct 56338
>gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, complete sequence Length = 183819 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctcttcct 54 |||||||||||||||| ||||||||| Sbjct: 82636 ccctctcctctcctcttcctcttcct 82661
>gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosome 14, complete sequence Length = 172035 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 94118 cctctcctctcctctccctctt 94139
>gb|AC126679.2| Mus musculus BAC clone RP24-319J7 from chromosome 19, complete sequence Length = 172299 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 tctcctctcctctccctcttccttct 57 |||||||||||| ||||||||||||| Sbjct: 76340 tctcctctcctcaccctcttccttct 76315
>gb|AC129316.4| Mus musculus BAC clone RP23-415J6 from chromosome 7, complete sequence Length = 190374 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 98335 cctctcctctcctctccctctt 98314
>gb|AC124423.3| Mus musculus BAC clone RP24-328B20 from chromosome 8, complete sequence Length = 171403 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 73073 ccctctcctctcctctccctct 73094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 73058 cctctcctctcctctccctct 73078 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctc 49 |||||||||||||||||||| Sbjct: 73174 cctctcctctcctctccctc 73193
>gb|AC121872.2| Mus musculus BAC clone RP24-122E10 from 12, complete sequence Length = 199519 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctcttccttct 57 ||||||||||||||||| |||| ||||||| Sbjct: 111864 cccctctcctctcctcttcctcctccttct 111835
>gb|AC098721.3| Mus musculus BAC clone RP23-2O23 from 2, complete sequence Length = 219368 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 33719 ccctctcctctcctctccctct 33698
>gb|AC118543.30| Mus musculus strain C57BL/6J clone rp23-254b17 map 17, complete sequence Length = 241570 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 196039 cctctcctctcctctccctctt 196018
>emb|AL445990.7| Human DNA sequence from clone RP11-103A6 on chromosome 1 Contains part of the DNM3 gene for dynamin 3, complete sequence Length = 42418 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 18894 cctctcctctcctctccctctt 18915
>emb|AL359184.11| Human DNA sequence from clone RP11-452I10 on chromosome 13 Contains part of a novel gene (containd FLJ31509 and KIAA0970), complete sequence Length = 24019 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 9699 ccctctcctctcctctccctct 9720 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 9683 ccctctcctctcctctccctct 9704
>emb|AL356213.10| Human DNA sequence from clone RP5-1171F9 on chromosome Xq23-25 Contains part of the GRIA3 gene for glutamate receptor, ionotrophic, AMPA 3, complete sequence Length = 87793 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 tctcctctcctctccctcttcc 53 |||||||||||||||||||||| Sbjct: 56800 tctcctctcctctccctcttcc 56821
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccacccctctcctctcctctcc 46 |||||||||||||||||||||| Sbjct: 29127 ccacccctctcctctcctctcc 29106
>gb|AC130186.4| Atelerix albiventris clone LB4-244I20, complete sequence Length = 150635 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ccacccctctcctctcctctcc 46 |||||||||||||||||||||| Sbjct: 45769 ccacccctctcctctcctctcc 45790
>gb|AC162911.2| Mus musculus BAC clone RP24-363M14 from chromosome 12, complete sequence Length = 150202 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 ctctcctctccctcttccttct 57 |||||||||||||||||||||| Sbjct: 120588 ctctcctctccctcttccttct 120567
>emb|AL132978.1|ATF3A4 Arabidopsis thaliana DNA chromosome 3, BAC clone F3A4 Length = 108158 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 acgccaccgtcttcctcgccaagttctacggccg 291 |||||||||||||| |||| ||||||| |||||| Sbjct: 11885 acgccaccgtcttcgtcgctaagttcttcggccg 11918
>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence Length = 234778 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 96918 ccctctcctctcctctccctct 96939 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 96869 ccctctcctctcctctccctct 96890 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 96831 ccctctcctctcctctccctct 96852
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccacccctctcctctcctctcc 46 |||||||||||||||||||||| Sbjct: 118175 ccacccctctcctctcctctcc 118154
>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156096 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 124178 ccctctcctctcctctccctct 124199
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ccacccctctcctctcctctcc 46 |||||||||||||||||||||| Sbjct: 806675 ccacccctctcctctcctctcc 806696
>emb|BX936296.17| Mouse DNA sequence from clone RP23-27J1 on chromosome 2, complete sequence Length = 188273 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 168148 ccctctcctctcctctccctct 168169
>gb|BT006287.1| Arabidopsis thaliana At3g49940 mRNA, complete cds Length = 744 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 acgccaccgtcttcctcgccaagttctacggccg 291 |||||||||||||| |||| ||||||| |||||| Sbjct: 101 acgccaccgtcttcgtcgctaagttcttcggccg 134
>gb|AC102488.11| Mus musculus chromosome 1, clone RP24-496O18, complete sequence Length = 127076 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 ccacccctctcctctcctctccctct 50 ||||||||||||||||| |||||||| Sbjct: 50989 ccacccctctcctctcccctccctct 51014
>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence Length = 175021 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 55714 ccctctcctctcctctccctct 55693
>emb|BX824099.1|CNS0A5QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 953 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 acgccaccgtcttcctcgccaagttctacggccg 291 |||||||||||||| |||| ||||||| |||||| Sbjct: 197 acgccaccgtcttcgtcgctaagttcttcggccg 230
>gb|AF276149.1|AF276149 Scaphirhynchus platorynchus microsatellite Spl-41 sequence Length = 598 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 ctctcctctcctctccctcttc 52 |||||||||||||||||||||| Sbjct: 323 ctctcctctcctctccctcttc 344
>gb|AY085761.1| Arabidopsis thaliana clone 17840 mRNA, complete sequence Length = 1039 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 acgccaccgtcttcctcgccaagttctacggccg 291 |||||||||||||| |||| ||||||| |||||| Sbjct: 223 acgccaccgtcttcgtcgctaagttcttcggccg 256
>gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181974 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 92113 ccctctcctctcctctccctct 92134
>gb|BT002449.1| Arabidopsis thaliana putative protein (At3g49940) mRNA, complete cds Length = 1036 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 acgccaccgtcttcctcgccaagttctacggccg 291 |||||||||||||| |||| ||||||| |||||| Sbjct: 224 acgccaccgtcttcgtcgctaagttcttcggccg 257
>emb|BX470203.6| Mouse DNA sequence from clone RP23-290J11 on chromosome X, complete sequence Length = 53518 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcctt 55 ||||||||||||||||||||| |||| Sbjct: 22876 cctctcctctcctctccctctccctt 22901
>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete sequence Length = 334222 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 62210 ccctctcctctcctctccctct 62189
>emb|CT027556.11| Mouse DNA sequence from clone RP23-405M23 on chromosome 12, complete sequence Length = 209313 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 ctctcctctccctcttccttct 57 |||||||||||||||||||||| Sbjct: 86696 ctctcctctccctcttccttct 86717
>gb|AC105408.5| Mus musculus BAC clone RP24-217P15 from chromosome 15, complete sequence Length = 162325 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 125795 cctctcctctcctctccctctt 125816
>emb|AL773565.17| Mouse DNA sequence from clone RP23-76A20 on chromosome X, complete sequence Length = 132915 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 84879 ccctctcctctcctctccctct 84900 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 84604 ccctctcctctcctctccctct 84625 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 84280 ccctctcctctcctctccctct 84301 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 85000 cctctcctctcctctccctct 85020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 84960 cctctcctctcctctccctct 84980 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 17357 cctctcctctcctctccctct 17337
>gb|AC122380.4| Mus musculus BAC clone RP23-476C23 from 10, complete sequence Length = 210627 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 38141 ccctctcctctcctctccctct 38162
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctctt 51 |||||||||||||||||||||| Sbjct: 36732 cctctcctctcctctccctctt 36753
>emb|AL845316.3| Mouse DNA sequence from clone RP23-348I7 on chromosome X, complete sequence Length = 197688 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 190878 ccctctcctctcctctccctct 190899
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete sequence Length = 248940 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 3918 ccctctcctctcctctccctct 3939
>gb|AC164114.2| Mus musculus BAC clone RP24-576O9 from chromosome 14, complete sequence Length = 182232 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctct 50 |||||||||||||||||||||| Sbjct: 20721 ccctctcctctcctctccctct 20742
>emb|AL627185.10| Mouse DNA sequence from clone RP23-332E2 on chromosome 4, complete sequence Length = 120180 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 agggctgcagcgaggactgcag 210 |||||||||||||||||||||| Sbjct: 47212 agggctgcagcgaggactgcag 47233
>gb|AC123726.11| Mus musculus chromosome 3, clone RP23-436F15, complete sequence Length = 224297 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 126490 cctctcctctcctctccctct 126470
>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence Length = 162813 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 2420 cctctcctctcctctccctct 2400
>gb|AC136372.13| Mus musculus chromosome 15, clone RP23-232G24, complete sequence Length = 201204 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 49778 cctctcctctcctctccctct 49798
>gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136L2 genes, complete sequence; frRUNX2 (frRUNX2) gene, complete cds; and frCLIC5, frENPP5, frPHIP, frIRAK1BP1, and frTBX18 genes, complete sequence Length = 235024 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 cacccctctcctctcctctccctct 50 |||||||||||||||||| |||||| Sbjct: 61277 cacccctctcctctcctcaccctct 61301
>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence Length = 185807 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 52267 cctctcctctcctctccctct 52247
>gb|AC116505.13| Mus musculus chromosome 5, clone RP24-302O2, complete sequence Length = 178695 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||||| ||||||| Sbjct: 52890 cctctcctctcctctccttcttcct 52914
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 100856 cctctcctctcctctccctct 100876
>gb|AC167816.4| Mus musculus BAC clone RP23-317F20 from chromosome 9, complete sequence Length = 198915 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cacccctctcctctcctctcc 46 ||||||||||||||||||||| Sbjct: 56481 cacccctctcctctcctctcc 56461
>gb|AC163399.6| Mus musculus chromosome 18, clone RP24-66G13, complete sequence Length = 173868 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 30 cctctcctctcctctc-cctcttccttct 57 |||||||||||||||| |||||||||||| Sbjct: 71167 cctctcctctcctctctcctcttccttct 71195
>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence Length = 172282 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||| ||||||||| Sbjct: 6632 cctctcctctcctcttcctcttcct 6608
>gb|AC166170.4| Mus musculus BAC clone RP23-174N23 from chromosome 6, complete sequence Length = 216743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||| ||||||||| Sbjct: 189501 cctctcctctcctcttcctcttcct 189525
>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence Length = 176868 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctc 49 ||||||||||||||||||||| Sbjct: 26517 ccctctcctctcctctccctc 26497
>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180936 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 |||||||||||||||||||| |||| Sbjct: 121575 cctctcctctcctctccctcctcct 121599
>gb|AC102794.8| Mus musculus chromosome 3, clone RP23-235G13, complete sequence Length = 166028 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 139516 cctctcctctcctctccctct 139536
>gb|AC139042.18| Mus musculus chromosome 18, clone RP23-261C19, complete sequence Length = 195202 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 30 cctctcctctcctctc-cctcttccttct 57 |||||||||||||||| |||||||||||| Sbjct: 148552 cctctcctctcctctctcctcttccttct 148580
>gb|AC165307.6| Mus musculus chromosome 3, clone RP24-372I24, complete sequence Length = 136853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 126741 cctctcctctcctctccctct 126761
>gb|AC134426.20| Mus musculus chromosome 1, clone RP24-342A12, complete sequence Length = 196208 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 cacccctctcctctcctctccctct 50 |||| |||||||||||||||||||| Sbjct: 116531 cacctctctcctctcctctccctct 116507
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 7911 cctctcctctcctctccctct 7891
>gb|U89337.1|HSMHC3W36A Homo sapiens HLA class III region containing NG7, cAMP response element binding protein-related protein (CREB-RP), and tenascin X genes, complete cds, complete sequence Length = 100267 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 44625 gaggactgcagcatccgcacctgcc 44649
>gb|AC115044.10| Mus musculus chromosome 3, clone RP24-297E7, complete sequence Length = 143527 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||||| ||||||| Sbjct: 37745 cctctcctctcctctccttcttcct 37721
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 362 ctctacgaggcctgcggccggatcg 386 |||||||||||||| |||||||||| Sbjct: 325362 ctctacgaggcctggggccggatcg 325386 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 cgaggcgcaggccaacgccaccgtcttc 271 |||||||| ||||||| ||||||||||| Sbjct: 273798 cgaggcgccggccaacaccaccgtcttc 273771
>gb|AC105323.28| Mus musculus chromosome 3, clone RP23-424L10, complete sequence Length = 183897 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ccacccctctcctctcctctc 45 ||||||||||||||||||||| Sbjct: 118212 ccacccctctcctctcctctc 118192
>gb|AC157938.9| Mus musculus chromosome 5, clone RP23-307P18, complete sequence Length = 188926 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 160169 cctctcctctcctctccctct 160149
>gb|AC166645.4| Mus musculus chromosome 1, clone RP24-355D12, complete sequence Length = 169550 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tctcctctccctcttccttct 57 ||||||||||||||||||||| Sbjct: 117490 tctcctctccctcttccttct 117470
>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete sequence Length = 211170 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 |||||||||||||||| |||||||| Sbjct: 93310 cctctcctctcctctctctcttcct 93334
>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence Length = 209896 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 93263 cctctcctctcctctccctct 93283
>gb|AC166112.2| Mus musculus BAC clone RP23-63L7 from chromosome 9, complete sequence Length = 243289 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 104003 cctctcctctcctctccctct 103983
>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence Length = 268516 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 21029 cctctcctctcctctccctct 21049
>gb|AC164430.3| Mus musculus BAC clone RP23-441D9 from chromosome 9, complete sequence Length = 205185 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 97427 cctctcctctcctctccctct 97407
>gb|AC131919.13| Mus musculus chromosome 15, clone RP24-239J20, complete sequence Length = 177896 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctcttccttc 56 |||||||||||||||||| ||||||||| Sbjct: 103714 cccctctcctctcctctctgtcttccttc 103686
>gb|AC103396.8| Mus musculus chromosome 1, clone RP24-142I5, complete sequence Length = 183930 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tctcctctccctcttccttct 57 ||||||||||||||||||||| Sbjct: 178217 tctcctctccctcttccttct 178197
>gb|AC105979.13| Mus musculus chromosome 14, clone RP24-301E12, complete sequence Length = 163688 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 53801 cctctcctctcctctccctct 53821
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctcttcc 53 ||||||||||||||||||| ||||| Sbjct: 142378 ccctctcctctcctctcccccttcc 142402
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 194380 cctctcctctcctctccctct 194400
>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence Length = 199679 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 tctcctctcctctccctcttc 52 ||||||||||||||||||||| Sbjct: 98312 tctcctctcctctccctcttc 98332
>gb|AC109627.8| Mus musculus chromosome 16, clone RP24-226M22, complete sequence Length = 176288 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 12478 cctctcctctcctctccctct 12458
>gb|AC119952.12| Mus musculus chromosome 14, clone RP24-448F1, complete sequence Length = 181695 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 59841 cctctcctctcctctccctct 59861
>gb|AC110177.19| Mus musculus chromosome 1, clone RP24-245K23, complete sequence Length = 165052 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||| ||||||||| Sbjct: 163910 cctctcctctcctcttcctcttcct 163886
>ref|XM_877133.1| PREDICTED: Bos taurus similar to LIM-only protein 3 (Neuronal specific transcription factor DAT1), transcript variant 4 (LOC532870), mRNA Length = 3785 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 25 ccacccctctcctctcctctccctcttccttct 57 ||||||||| |||||||||||||| |||||||| Sbjct: 70 ccacccctcccctctcctctccct-ttccttct 39
>ref|XM_877039.1| PREDICTED: Bos taurus similar to LIM-only protein 3 (Neuronal specific transcription factor DAT1), transcript variant 3 (LOC532870), mRNA Length = 3555 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 25 ccacccctctcctctcctctccctcttccttct 57 ||||||||| |||||||||||||| |||||||| Sbjct: 64 ccacccctcccctctcctctccct-ttccttct 33
>gb|AC124719.3| Mus musculus BAC clone RP23-382J10 from chromosome 12, complete sequence Length = 191038 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 146765 cctctcctctcctctccctct 146785
>gb|AC131329.13| Mus musculus chromosome 13, clone RP23-474B11, complete sequence Length = 172830 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 48175 cctctcctctcctctccctct 48155
>gb|AC147474.2| Mus musculus BAC clone RP23-425D11 from chromosome 19, complete sequence Length = 195273 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 172018 cctctcctctcctctccctct 172038
>gb|AC131781.3| Mus musculus BAC clone RP24-344J9 from chromosome 15, complete sequence Length = 139338 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 23052 cctctcctctcctctccctct 23032
>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence Length = 189550 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 158504 cccctctcctctcctctccct 158484
>gb|AC124621.18| Mus musculus chromosome 1, clone RP23-393P20, complete sequence Length = 180208 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ctctcctctcctctccctctt 51 ||||||||||||||||||||| Sbjct: 14536 ctctcctctcctctccctctt 14556
>gb|AC163498.3| Mus musculus chromosome 1, clone RP23-86J11, complete sequence Length = 192061 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 86508 cctctcctctcctctccctct 86488
>gb|AC024914.48| Mus musculus BAC Clone 262c6 RPCI-23, complete sequence Length = 205922 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 57996 cctctcctctcctctccctct 57976
>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence Length = 234816 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 200957 cctctcctctcctctccctct 200977
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence Length = 221436 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 71006 cccctctcctctcctctccct 70986
>gb|AC165944.3| Mus musculus chromosome 3, clone RP24-134A8, complete sequence Length = 175118 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 116696 cctctcctctcctctccctct 116716
>gb|AC112956.12| Mus musculus chromosome 9, clone RP23-412P4, complete sequence Length = 197841 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 114302 cctctcctctcctctccctct 114322
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 15713 cctctcctctcctctccctct 15733
>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence Length = 168641 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ccctctcctctcctctccctc 49 ||||||||||||||||||||| Sbjct: 60143 ccctctcctctcctctccctc 60163
>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence Length = 224904 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 6955 cctctcctctcctctccctct 6935
>gb|AC113476.20| Mus musculus chromosome 17, clone RP23-304J1, complete sequence Length = 227026 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||||| ||||||| Sbjct: 76908 cctctcctctcctctccttcttcct 76932
>gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, complete sequence Length = 187677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 18398 cctctcctctcctctccctct 18418
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 88664 cctctcctctcctctccctct 88684
>gb|AC166261.6| Mus musculus BAC RP23-343K20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 165881 cccctctcctctcctctccct 165901
>gb|AC140418.3| Mus musculus BAC clone RP24-418D12 from chromosome 5, complete sequence Length = 129709 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||||| ||||||| Sbjct: 129484 cctctcctctcctctccttcttcct 129508
>gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, complete sequence Length = 189709 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 108698 cctctcctctcctctccctct 108678
>gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, complete sequence Length = 217279 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 156458 cctctcctctcctctccctct 156438 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ctctcctctcctctccctct 50 |||||||||||||||||||| Sbjct: 111845 ctctcctctcctctccctct 111826
>gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosome 12, complete sequence Length = 189420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 107127 cccctctcctctcctctccct 107147
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 4256 cctctcctctcctctccctct 4276
>gb|AC133494.4| Mus musculus BAC clone RP24-443B5 from chromosome 7, complete sequence Length = 182616 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 82801 cctctcctctcctctccctct 82781
>ref|XM_753624.1| Ustilago maydis 521 hypothetical protein (UM02570.1) partial mRNA Length = 693 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 484 cctctcctctcctctccctct 464
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 19032 cctctcctctcctctccctct 19012
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 202386 cctctcctctcctctccctct 202366
>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence Length = 174384 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 115624 cctctcctctcctctccctct 115604
>gb|AC122250.4| Mus musculus BAC clone RP23-167A3 from chromosome 19, complete sequence Length = 202060 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 159834 cctctcctctcctctccctct 159854
>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence Length = 208096 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 70646 cctctcctctcctctccctct 70626
>gb|AC138715.3| Mus musculus BAC clone RP23-283E23 from chromosome 15, complete sequence Length = 164806 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 41230 cctctcctctcctctccctct 41210
>emb|X62489.1|HSHEPEGF H.sapiens DNA for heptad and EGF repeats Length = 2664 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 2176 gaggactgcagcatccgcacctgcc 2200
>gb|AC113096.12| Mus musculus chromosome 14, clone RP23-312M23, complete sequence Length = 224556 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 114881 cctctcctctcctctccctct 114901
>gb|AC113067.8| Mus musculus chromosome 16, clone RP23-264I14, complete sequence Length = 246802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 128552 cctctcctctcctctccctct 128572
>gb|AC123923.2| Mus musculus BAC clone RP24-228I17 from chromosome 1, complete sequence Length = 163182 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 89540 cctctcctctcctctccctct 89560
>gb|AC122480.3| Mus musculus BAC clone RP24-355B22 from chromosome 14, complete sequence Length = 164525 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 161704 cctctcctctcctctccctct 161684
>gb|AC124402.5| Mus musculus BAC clone RP24-365M23 from chromosome 12, complete sequence Length = 205782 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 24393 cctctcctctcctctccctct 24413
>gb|AC117263.4| Mus musculus BAC clone RP24-547F18 from chromosome 19, complete sequence Length = 201607 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 87065 cctctcctctcctctccctct 87085
>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence Length = 154235 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 89459 cctctcctctcctctccctct 89439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 89295 cctctcctctcctctccctct 89275 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcc 53 |||||||||||||||||| ||||| Sbjct: 89082 cctctcctctcctctcccccttcc 89059 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccc 47 |||||||||||||||||||| Sbjct: 89041 cccctctcctctcctctccc 89022
>gb|AC128669.4| Mus musculus BAC clone RP24-115D21 from chromosome 17, complete sequence Length = 169571 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 88237 cctctcctctcctctccctct 88257
>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence Length = 191733 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||| ||||||||| Sbjct: 144932 cctctcctctcctcttcctcttcct 144908
>gb|AC121775.3| Mus musculus BAC clone RP23-356B13 from chromosome 6, complete sequence Length = 188443 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 135845 cctctcctctcctctccctct 135825
>gb|AC131746.3| Mus musculus BAC clone RP23-62F20 from 3, complete sequence Length = 201620 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 81877 cctctcctctcctctccctct 81897
>gb|AC122237.4| Mus musculus BAC clone RP23-143A15 from 8, complete sequence Length = 183867 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 65462 cctctcctctcctctccctct 65442
>gb|AC124573.4| Mus musculus BAC clone RP23-159F13 from 10, complete sequence Length = 191206 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 76482 cctctcctctcctctccctct 76502
>ref|NM_019105.5| Homo sapiens tenascin XB (TNXB), transcript variant XB, mRNA Length = 13268 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 2044 gaggactgcagcatccgcacctgcc 2068
>gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complete sequence Length = 161199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 9069 cctctcctctcctctccctct 9089
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 74288 cctctcctctcctctccctct 74268
>gb|AC098705.2| Mus musculus BAC clone RP23-1B19 from 3, complete sequence Length = 202444 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 63460 cctctcctctcctctccctct 63480
>gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, complete sequence Length = 177476 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 135422 cctctcctctcctctccctct 135442
>gb|AC118224.8| Mus musculus chromosome 10, clone RP23-341N20, complete sequence Length = 205533 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 200981 cctctcctctcctctccctct 201001
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctcttcc 53 |||||||||| |||||||||||||| Sbjct: 160776 ccctctcctcccctctccctcttcc 160752
>gb|AC025116.14| Mus musculus chromosome 1, clone RP23-124O19, complete sequence Length = 233298 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 46126 cctctcctctcctctccctct 46146
>gb|AC005817.8| Mus musculus strain 129/Sv clone ct7-581i11 map 16, complete sequence Length = 188708 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 175230 cctctcctctcctctccctct 175250
>gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, complete sequence Length = 171002 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 34041 cctctcctctcctctccctct 34061
>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence Length = 225423 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctcttcct 54 |||||||||||||||||| |||||| Sbjct: 85154 cctctcctctcctctcccccttcct 85130
>gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome 13, complete sequence Length = 237830 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 5312 cctctcctctcctctccctct 5332
>ref|NG_000013.2| Homo sapiens MHC class III complement gene cluster, monomodular haplotype (MCGC@) on chromosome 6 Length = 180017 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 32626 gaggactgcagcatccgcacctgcc 32650
>emb|AL662884.11| Human DNA sequence from clone XXbac-300A18 on chromosome 6 contains the 5' end of the TNXB gene for tenascin XB (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS), the CREBL1 gene for cAMP responsive element binding protein-like 1 (CREBL1, G13, CREB-RP), the FKBPL gene for FK506 binding protein like (FKBPL, NG7, DIR1), the gene for chromosome 6 open reading frame 31 (C6orf31, NG5), a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2 (PPT2, G14), the gene for chromosome 6 open reading frame 8 (C6orf8, NG3), the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (AGPAT1,G15, LPAATA, MGC5423, LPAAT-alpha), the RNF5 gene for ring finger protein 5 (RNF5, G16, NG2, RING5), the AGER gene for advanced glycosylation end product-specific receptor (AGER, RAGE), the PBX2 gene for pre-B-cell leukemia transcription factor 2 (PBX2, G17, HOX12, PBX2MHC), the C6orf9 gene for chromosome 6 open reading frame 9 (C6orf9, G18, NG1), the NOTCH4 gene for Notch homolog 4 (Drosophila) (NOTCH4, INT3, NOTCH3) and seven CpG islands, complete sequence Length = 137935 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 8840 gaggactgcagcatccgcacctgcc 8816
>emb|AL662828.5| Human DNA sequence from clone XXbac-105D18 on chromosome 6 contains the 3' end of the CYP21A2 gene for cytochrome P450, subfamily XXIA (steroid 21-hydroxylase, congenital adrenal hyperplasia), polypeptide 2, the TNXB gene for tenascin XB, the CREBL1 gene for cAMP responsive element binding protein-like 1, the FKBPL gene for FK506 binding protein like, the gene for chromosome 6 open reading frame 31, a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2, the gene for chromosome 6 open reading frame 8, the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) and six CpG islands, complete sequence Length = 138992 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 56627 gaggactgcagcatccgcacctgcc 56603
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctc 49 ||||||||||||||||||||| Sbjct: 2879 ccctctcctctcctctccctc 2859
>gb|AC096845.2| Takifugu rubripes clone 214J14, complete sequence Length = 134105 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 63600 cctctcctctcctctccctct 63620
>emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5 on chromosome 22q12.3-13.2, complete sequence Length = 142723 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 56129 cctctcctctcctctccctct 56109 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 caccacccctctcctctcctctcc 46 |||||| ||||||||||||||||| Sbjct: 56151 caccacacctctcctctcctctcc 56128
>gb|BT009155.1| Triticum aestivum clone wl1n.pk0068.a8:fis, full insert mRNA sequence Length = 942 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 67 cctctcctctcctctccctct 47
>gb|BT009142.1| Triticum aestivum clone wl1n.pk0053.d10:fis, full insert mRNA sequence Length = 943 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 61 cctctcctctcctctccctct 41
>gb|AY038877.1|AY038861S16 Mus musculus protein tyrosine phosphatase receptor-like protein J (Ptprj) gene, exons 2 through 24 and complete cds Length = 70607 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 43557 cctctcctctcctctccctct 43577
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ctctcctctcctctccctctt 51 ||||||||||||||||||||| Sbjct: 111165 ctctcctctcctctccctctt 111185
>gb|AC160559.5| Mus musculus BAC clone RP24-404N24 from chromosome 10, complete sequence Length = 157670 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccctcttc 52 ||||||||||||||||| ||||||| Sbjct: 70161 cccctctcctctcctctgcctcttc 70185
>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence Length = 201842 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 143010 cctctcctctcctctccctct 142990
>emb|AL663034.12| Mouse DNA sequence from clone RP23-266P16 on chromosome 11 Contains part of a novel gene, complete sequence Length = 70518 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 53247 cctctcctctcctctccctct 53267
>emb|AL732548.9| Mouse DNA sequence from clone RP24-145P21 on chromosome 4 Contains a novel gene, the Slc31a1 gene for solute carrier family 31 member 1, the 5' end of a novel gene and a CpG island, complete sequence Length = 100074 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ccctctcctctcctctccctc 49 ||||||||||||||||||||| Sbjct: 42780 ccctctcctctcctctccctc 42760
>emb|AL645603.12| Mouse DNA sequence from clone RP23-299L18 on chromosome 11 Contains the 5' end of the Nf2 gene for neurofibromatosis 2, the 5' end of the Nipsnap1 gene for 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans) and a CpG island, complete sequence Length = 73503 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctcttccttc 56 |||||| |||||||||||| ||||||||| Sbjct: 54457 cccctcccctctcctctccttcttccttc 54429
>emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060B20, complete sequence Length = 147254 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||| ||||||||| Sbjct: 112198 cctctcctctcctcttcctcttcct 112222 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 ||||||||||||||| ||||||||| Sbjct: 45894 cctctcctctcctcttcctcttcct 45918
>emb|AL049547.10|HSDJ34F7 Human DNA sequence from clone RP1-34F7 on chromosome 6p21.2-21.33 Contains the 3' end of the gene for CREB-RP (G13), the gene for tenascin XB and XA, the CYP21A2 gene for cytochrome P450, subfamily XXIA (steroid 21-hydroxylase), polypeptide 2 (CYP21, P450c21B), the C4A gene for complement component 4A, the gene for RP MHC class III complement protein (G11), the DOM3Z gene for DOM-3 (C. elegans) homolog Z, the SKIV2L gene for superkiller viralicidic activity 2 (S. cerevisiae homolog)-like (SKI2W) and the gene for RD (RDBP). Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 129811 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 29055 gaggactgcagcatccgcacctgcc 29079
>emb|CR925796.6| Human DNA sequence from clone DAMC-327B5 on chromosome 6, complete sequence Length = 37304 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 1223 gaggactgcagcatccgcacctgcc 1199
>gb|AC162391.9| Mus musculus 6 BAC RP23-126H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209173 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 199700 cctctcctctcctctccctct 199680
>emb|AL669814.16| Mouse DNA sequence from clone RP23-431J18 on chromosome 11 Contains the 5' end of the Ranbp17 gene for RAN binding protein 17, the Gabrp gene for gamma-aminobutyric acid (GABA-A) receptor, pi, the 3' end of the Kcnip1 gene for Kv channel-interacting protein 1 and a CpG island, complete sequence Length = 198320 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 91458 cctctcctctcctctccctct 91438
>emb|AL646044.13| Mouse DNA sequence from clone RP23-269O5 on chromosome 11, complete sequence Length = 197473 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccctcttc 52 ||||||||||||||||||| ||||| Sbjct: 176899 cccctctcctctcctctccttcttc 176923
>emb|AL662779.10| Mouse DNA sequence from clone RP23-177A4 on chromosome 11 Contains the Kif2b gene for kinesin family member 28, complete sequence Length = 231926 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 156768 cctctcctctcctctccctct 156788
>gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, complete sequence Length = 190809 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 35295 cccctctcctctcctctccct 35315
>emb|CR547132.3| Human DNA sequence from clone DAMA-239A17 on chromosome 6, complete sequence Length = 37766 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 32141 gaggactgcagcatccgcacctgcc 32117
>emb|AL606511.8| Mouse DNA sequence from clone RP23-262C6 on chromosome 13 Contains the Sox4 gene for SRY-box containing protein 4, a novel gene and two CpG islands, complete sequence Length = 154685 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 96684 cctctcctctcctctccctct 96704
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and L27A (Rpl27a) pseudogenes and a CpG island, complete sequence Length = 196857 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 68880 cctctcctctcctctccctct 68900
>gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, complete sequence Length = 171770 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 48712 cctctcctctcctctccctct 48692
>emb|CR759792.3| Human DNA sequence from clone DAMC-284F20 on chromosome 6, complete sequence Length = 45162 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 44385 gaggactgcagcatccgcacctgcc 44361
>emb|CR753803.4| Human DNA sequence from clone DADB-220I18 on chromosome 6, complete sequence Length = 104677 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 40662 gaggactgcagcatccgcacctgcc 40638
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 13138 cctctcctctcctctccctct 13118
>gb|AF477382.1|AF477382S1 Takifugu rubripes transcription factor runx2 (runx2) gene, 5' flanking region Length = 58521 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 cacccctctcctctcctctccctct 50 |||||||||||||||||| |||||| Sbjct: 31537 cacccctctcctctcctcaccctct 31561
>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence Length = 236367 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 186480 cctctcctctcctctccctct 186500
>emb|CR749377.1| Homo sapiens mRNA; cDNA DKFZp686A15125 (from clone DKFZp686A15125) Length = 5929 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 2843 cccctctcctctcctctccct 2863
>gb|AC008998.5| Homo sapiens chromosome 19 clone LLNLR-262C5, complete sequence Length = 47844 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 |||| |||||||||||||||||||| Sbjct: 22722 cctcccctctcctctccctcttcct 22746
>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence Length = 160748 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 28 cccctctcctctcctctccctcttccttc 56 ||||||||||||||||| ||||||||||| Sbjct: 51142 cccctctcctctcctct-cctcttccttc 51115
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tccgccccggcatcttccgct 356 ||||||||||||||||||||| Sbjct: 1907282 tccgccccggcatcttccgct 1907302 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 ccccgaggcgcaggccaacgccaccgtc 268 |||||||||| ||||| ||||||||||| Sbjct: 4623318 ccccgaggcggaggccgacgccaccgtc 4623291
>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10, complete sequence Length = 199956 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccctcttccttc 56 |||||| |||||||||||| ||||||||| Sbjct: 14165 cccctcccctctcctctccttcttccttc 14193
>gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, complete sequence Length = 205264 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 120691 cctctcctctcctctccctct 120711
>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete sequence Length = 208903 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 62776 cctctcctctcctctccctct 62796
>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone ct7-342a4, complete sequence Length = 154201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 147405 cctctcctctcctctccctct 147385
>ref|NG_004658.1| Homo sapiens MHC class III complement gene cluster, bimodular haplotype (MCGC2@) on chromosome 6 Length = 201523 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 168796 gaggactgcagcatccgcacctgcc 168772
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccctctcctctcctctccct 48 ||||||||||||||||||||| Sbjct: 10903 cccctctcctctcctctccct 10923
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202745 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 139169 cctctcctctcctctccctct 139149
>gb|AC144923.7| Mus musculus chromosome 7, clone RP23-366A16, complete sequence Length = 177745 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 123286 cctctcctctcctctccctct 123266
>gb|AC012385.28| Homo sapiens 12 BAC RP11-350A5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 24001 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctcttcct 54 |||||||||||||||| |||||||| Sbjct: 7829 cctctcctctcctctctctcttcct 7853
>gb|AC159881.2| Mus musculus BAC clone RP24-493B12 from chromosome 9, complete sequence Length = 126762 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 104453 cctctcctctcctctccctct 104473
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctctcctctcctctccctct 50 ||||||||||||||||||||| Sbjct: 81929 cctctcctctcctctccctct 81909
>ref|NG_005163.1| Homo sapiens MHC class III complement gene cluster, monomodular haplotype (MCGC3@) on chromosome 6 Length = 164376 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 131703 gaggactgcagcatccgcacctgcc 131679
>gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex BAC MMU021E24, complete sequence Length = 189424 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 104809 gaggactgcagcatccgcacctgcc 104785
>gb|AC148660.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007F01, complete sequence Length = 176267 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gaggactgcagcatccgcccctgcc 224 |||||||||||||||||| |||||| Sbjct: 171666 gaggactgcagcatccgcacctgcc 171642 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,610,329 Number of Sequences: 3902068 Number of extensions: 3610329 Number of successful extensions: 201500 Number of sequences better than 10.0: 714 Number of HSP's better than 10.0 without gapping: 727 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 190541 Number of HSP's gapped (non-prelim): 10978 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
