ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59g10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Minus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 5896759 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 5896700 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 5896699 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 5896640 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 5896639 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 5896580 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 5896579 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 5896536 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Minus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 5891089 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 5891030 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 5891029 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 5890970 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 5890969 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 5890910 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 5890909 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 5890866 Score = 117 bits (59), Expect = 3e-23 Identities = 247/307 (80%), Gaps = 2/307 (0%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 5907043 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 5906984 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 5906983 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 5906924 Query: 234 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 293 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 5906923 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 5906864 Query: 294 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 352 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 5906863 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 5906805 Query: 353 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||||| Sbjct: 5906804 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggca 5906745 Query: 413 tgtcggc 419 |||||| Sbjct: 5906744 cgtcggc 5906738 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 5930359 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 5930300 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 5930299 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 5930240 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 5930239 tactcgcagcg 5930229 Score = 73.8 bits (37), Expect = 4e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| ||| | || || Sbjct: 5925075 atcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctc 5925016 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || ||||| || || |||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 5925015 gcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtac 5924956 Query: 234 tactcccagcgtgccac 250 ||||| ||||| ||||| Sbjct: 5924955 tactcgcagcgcgccac 5924939 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 337 agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatct 396 |||| ||| |||| ||||| ||||||||||| ||||| ||| ||||||||||||| ||| Sbjct: 5916433 agcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcgcgctcttct 5916374 Query: 397 tctgccag 404 |||||||| Sbjct: 5916373 tctgccag 5916366 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 5930130 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 5930071 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 5930070 agatatggcacgtcggc 5930054 Score = 42.1 bits (21), Expect = 1.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 351 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 410 ||||| ||||||||||| ||||| ||| ||||||||| ||| ||||| ||||| ||| Sbjct: 5924838 tggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctacagatatgg 5924779 Query: 411 catgtcggc 419 || |||||| Sbjct: 5924778 cacgtcggc 5924770
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Minus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 18411 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 18352 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 18351 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 18292 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 18291 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 18232 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 18231 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 18188 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Minus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 12741 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 12682 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 12681 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 12622 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 12621 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 12562 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 12561 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 12518 Score = 117 bits (59), Expect = 3e-23 Identities = 247/307 (80%), Gaps = 2/307 (0%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 28695 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 28636 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 28635 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 28576 Query: 234 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 293 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 28575 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 28516 Query: 294 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 352 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 28515 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 28457 Query: 353 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||||| Sbjct: 28456 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggca 28397 Query: 413 tgtcggc 419 |||||| Sbjct: 28396 cgtcggc 28390 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 52011 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 51952 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 51951 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 51892 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 51891 tactcgcagcg 51881 Score = 73.8 bits (37), Expect = 4e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| ||| | || || Sbjct: 46727 atcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctc 46668 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || ||||| || || |||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 46667 gcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtac 46608 Query: 234 tactcccagcgtgccac 250 ||||| ||||| ||||| Sbjct: 46607 tactcgcagcgcgccac 46591 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 337 agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatct 396 |||| ||| |||| ||||| ||||||||||| ||||| ||| ||||||||||||| ||| Sbjct: 38085 agcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcgcgctcttct 38026 Query: 397 tctgccag 404 |||||||| Sbjct: 38025 tctgccag 38018 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 51782 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 51723 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 51722 agatatggcacgtcggc 51706 Score = 42.1 bits (21), Expect = 1.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 351 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 410 ||||| ||||||||||| ||||| ||| ||||||||| ||| ||||| ||||| ||| Sbjct: 46490 tggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctacagatatgg 46431 Query: 411 catgtcggc 419 || |||||| Sbjct: 46430 cacgtcggc 46422
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Minus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 97534 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 97475 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 97474 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 97415 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 97414 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 97355 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 97354 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 97311 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Minus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 91864 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 91805 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 91804 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 91745 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 91744 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 91685 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 91684 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 91641 Score = 117 bits (59), Expect = 3e-23 Identities = 247/307 (80%), Gaps = 2/307 (0%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 107818 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 107759 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 107758 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 107699 Query: 234 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 293 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 107698 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 107639 Query: 294 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 352 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 107638 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 107580 Query: 353 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||||| Sbjct: 107579 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggca 107520 Query: 413 tgtcggc 419 |||||| Sbjct: 107519 cgtcggc 107513 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 131134 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 131075 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 131074 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 131015 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 131014 tactcgcagcg 131004 Score = 73.8 bits (37), Expect = 4e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| ||| | || || Sbjct: 125850 atcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctc 125791 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || ||||| || || |||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 125790 gcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtac 125731 Query: 234 tactcccagcgtgccac 250 ||||| ||||| ||||| Sbjct: 125730 tactcgcagcgcgccac 125714 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 337 agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatct 396 |||| ||| |||| ||||| ||||||||||| ||||| ||| ||||||||||||| ||| Sbjct: 117208 agcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcgcgctcttct 117149 Query: 397 tctgccag 404 |||||||| Sbjct: 117148 tctgccag 117141 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 130905 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 130846 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 130845 agatatggcacgtcggc 130829 Score = 42.1 bits (21), Expect = 1.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 351 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 410 ||||| ||||||||||| ||||| ||| ||||||||| ||| ||||| ||||| ||| Sbjct: 125613 tggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctacagatatgg 125554 Query: 411 catgtcggc 419 || |||||| Sbjct: 125553 cacgtcggc 125545
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Plus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 423
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Plus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 423
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Plus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 195 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 254 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 255 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 314 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 315 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 374 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 375 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 418
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 151 bits (76), Expect = 2e-33 Identities = 187/224 (83%) Strand = Plus / Plus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 423
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Plus Query: 192 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccact 251 |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 206 cgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgcgccacc 265 Query: 252 gccggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgc 311 ||||| |||||||| | |||||||| || || || | ||| || ||||| |||| Sbjct: 266 aggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcaggggtacccg 325 Query: 312 gatacgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgcc 371 || || || ||| | |||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 326 gagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtcgacgcc 385 Query: 372 gtgcacgccaagggcgcgctcatcttctgccagatctggcatgt 415 || ||| ||||||||| || || ||||||||||||||||||| Sbjct: 386 gtccaccgcaagggcgccatcttcgtctgccagatctggcatgt 429
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Plus Query: 195 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 254 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 278 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 337 Query: 255 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 314 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 338 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 397 Query: 315 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 374 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 398 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 457 Query: 375 cacgccaagggcgcgctcatcttctgccagatctggcatgtcgg 418 ||| ||||||||| ||| || |||||||| ||||||| ||||| Sbjct: 458 caccgcaagggcgccctcttcatctgccagctctggcacgtcgg 501
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Plus Query: 192 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccact 251 |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 228 cgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgcgccacc 287 Query: 252 gccggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgc 311 ||||| |||||||| | |||||||| || || || | ||| || ||||| |||| Sbjct: 288 aggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcaggggtacccg 347 Query: 312 gatacgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgcc 371 || || || ||| | |||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 348 gagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtcgacgcc 407 Query: 372 gtgcacgccaagggcgcgctcatcttctgccagatctggcatgt 415 || ||| ||||||||| || || ||||||||||||||||||| Sbjct: 408 gtccaccgcaagggcgccatcttcgtctgccagatctggcatgt 451
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 125 bits (63), Expect = 1e-25 Identities = 204/251 (81%) Strand = Plus / Plus Query: 171 ctggccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtg 230 ||||| ||||| || || |||||||||||||||||||| |||||||| |||| || || Sbjct: 730 ctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccgcacggcgccgtc 789 Query: 231 tactactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctcc 290 |||||| | ||||| ||||| || || | |||||||| |||||||| ||||||||| Sbjct: 790 tactacgcgcagcgcgccacccggggcggcctcctcatcactgaggccacgggcgtctcc 849 Query: 291 gacacggcacagggataccgcgatacgccaggcgtgtggacggcagagcacgtcgaggca 350 |||||||| ||||| ||| ||| ||||| || ||||||||| | || || || | ||| Sbjct: 850 gacacggcgcagggctacaccgacacgccgggagtgtggacgcccgaccaggtggcggcg 909 Query: 351 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 410 ||| ||||||||| || ||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 910 tggcggcccatcgtagacgccgtccacgccaagggcgccgtcttcttctgccagctctgg 969 Query: 411 catgtcggccg 421 || |||||||| Sbjct: 970 cacgtcggccg 980
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 117 bits (59), Expect = 3e-23 Identities = 247/307 (80%), Gaps = 2/307 (0%) Strand = Plus / Plus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 122 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 181 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 182 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 241 Query: 234 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 293 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 242 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 301 Query: 294 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 352 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 302 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 360 Query: 353 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||||| Sbjct: 361 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggca 420 Query: 413 tgtcggc 419 |||||| Sbjct: 421 cgtcggc 427
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 97.6 bits (49), Expect = 3e-17 Identities = 129/153 (84%), Gaps = 2/153 (1%) Strand = Plus / Plus Query: 268 tcaccgaggccaccggcgtctccgacacggcacagggataccgcgatacgccaggcgtgt 327 |||| ||||||||||||||||||||||| || ||||| |||| || || || ||| | | Sbjct: 259 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 318 Query: 328 ggacggcag-agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggc 386 ||||| ||| |||| |||||||| ||||||||||||||||| ||||| ||| ||||||| Sbjct: 319 ggacg-cagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggc 377 Query: 387 gcgctcatcttctgccagatctggcatgtcggc 419 || ||| || |||||||| ||||||| |||||| Sbjct: 378 gccctcttcatctgccagctctggcacgtcggc 410 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 114 atccctctcctgacgccgtacaagatggg 142 ||||| || |||||||||||||||||||| Sbjct: 123 atcccgctgctgacgccgtacaagatggg 151
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 192 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccac 250 |||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 191 cgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcgcagcgcgccac 249 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 336 gagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatc 395 ||||| |||||||| ||||||||||||||||| ||||| ||| ||||||||| || || Sbjct: 335 gagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccatcttc 394 Query: 396 ttctgccagatctggcatgt 415 ||||||||||||||||||| Sbjct: 395 gtctgccagatctggcatgt 414
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 79 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 138 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 139 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 198 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 199 tactcgcagcg 209 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 308 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 367 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 368 agatatggcacgtcggc 384
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 1093 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 1152 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1153 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 1212 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 1213 tactcgcagcg 1223 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 1322 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 1381 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 1382 agatatggcacgtcggc 1398
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 145 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 204 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 205 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 264 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 265 tactcgcagcg 275 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 374 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 433 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 434 agatatggcacgtcggc 450
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 114 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 173 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 117 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 176 Query: 174 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 233 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 177 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 236 Query: 234 tactcccagcg 244 ||||| ||||| Sbjct: 237 tactcgcagcg 247 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 346 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 405 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 406 agatatggcacgtcggc 422
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||| ||| ||||| ||||||||||||||||||||||| ||| ||||||||| Sbjct: 15176116 tcgaggcctggcggccgatcgttgatgccgtgcacgccaagggcgcactcttcttctgcc 15176057 Query: 403 agatctggca 412 | |||||||| Sbjct: 15176056 aaatctggca 15176047 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 371 cgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 |||||||||||||||||| || ||||||||||||| ||||| Sbjct: 15169717 cgtgcacgccaagggcgccgtcttcttctgccagatatggca 15169676 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 119 tctcctgacgccgtacaagatgggccagctcgacct 154 ||||||||| || |||||||||||||||||| |||| Sbjct: 15177586 tctcctgacaccctacaagatgggccagctcaacct 15177551
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||| ||| ||||| ||||||||||||||||||||||| ||| ||||||||| Sbjct: 148082 tcgaggcctggcggccgatcgttgatgccgtgcacgccaagggcgcactcttcttctgcc 148023 Query: 403 agatctggca 412 | |||||||| Sbjct: 148022 aaatctggca 148013 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 371 cgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 |||||||||||||||||| || ||||||||||||| ||||| Sbjct: 141683 cgtgcacgccaagggcgccgtcttcttctgccagatatggca 141642 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 119 tctcctgacgccgtacaagatgggccagctcgacct 154 ||||||||| || |||||||||||||||||| |||| Sbjct: 149552 tctcctgacaccctacaagatgggccagctcaacct 149517
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||| ||| ||||| ||||||||||||||||||||||| ||| ||||||||| Sbjct: 29489 tcgaggcctggcggccgatcgttgatgccgtgcacgccaagggcgcactcttcttctgcc 29430 Query: 403 agatctggca 412 | |||||||| Sbjct: 29429 aaatctggca 29420 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 371 cgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 |||||||||||||||||| || ||||||||||||| ||||| Sbjct: 23090 cgtgcacgccaagggcgccgtcttcttctgccagatatggca 23049 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 119 tctcctgacgccgtacaagatgggccagctcgacct 154 ||||||||| || |||||||||||||||||| |||| Sbjct: 30959 tctcctgacaccctacaagatgggccagctcaacct 30924
>dbj|AK121554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G12, full insert sequence Length = 1613 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||| ||| ||||| ||||||||||||||||||||||| ||| ||||||||| Sbjct: 548 tcgaggcctggcggccgatcgttgatgccgtgcacgccaagggcgcactcttcttctgcc 607 Query: 403 agatctggca 412 | |||||||| Sbjct: 608 aaatctggca 617 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 119 tctcctgacgccgtacaagatgggccagctcgacct 154 ||||||||| || |||||||||||||||||| |||| Sbjct: 93 tctcctgacaccctacaagatgggccagctcaacct 128
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 192 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcg 244 |||||||||||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1 cgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcg 53 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 343 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 402 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| | Sbjct: 152 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctgc 211 Query: 403 agatctggcatgtcggc 419 |||| ||||| |||||| Sbjct: 212 agatatggcacgtcggc 228
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 351 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatc 407 ||||||||||||||||| ||||| ||| |||||| |||||| |||||||||||||| Sbjct: 332 tggaagcccatcgtcgacgccgtccaccgcaagggtgcgctcttcttctgccagatc 388 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 205 acgtgccgcagccacacgctgcagtgtactactcccagcgtgcca 249 ||||||||||||| ||||| || ||||||||||| ||||| |||| Sbjct: 186 acgtgccgcagccgcacgccgccgtgtactactcgcagcgcgcca 230
>dbj|D83970.1| Vigna unguiculata mRNA for CPRD8 protein, complete cds Length = 1515 Score = 63.9 bits (32), Expect = 4e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 264 ctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgatacgccaggc 323 |||||| |||| || ||||| || |||||||| || || || |||| | | ||||| ||| Sbjct: 217 ctcatcgccgaagctaccggagtttccgacaccgctcaagggtaccccaacacgcctggc 276 Query: 324 gtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaag 383 | |||||| |||||| || || |||||||| ||||||||||||||||| || ||||| Sbjct: 277 atatggacgaaagagcaggtggaagcatggaaacccatcgtcgatgccgttcatgccaaa 336 Query: 384 ggcgcgctcatcttctgccagatctggcatgt 415 |||| || |||| |||||||| |||||||| Sbjct: 337 ggcggtatcttcttttgccagatttggcatgt 368
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 366 gatgccgtgcacgccaagggcgcgctcatcttctgccagatctggcatgtcggccg 421 ||||||||||| |||||||||| |||||||| |||| |||||||||||||||| Sbjct: 8347856 gatgccgtgcatgccaagggcggcatcatcttcctccagctctggcatgtcggccg 8347801
>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680 (OPR1) transcript variant AT1G76680.2 mRNA, complete cds Length = 1460 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 319 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 378 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 379 cttctgtcagatctggcatgttggccg 405
>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680 (OPR1) transcript variant AT1G76680.1 mRNA, complete cds Length = 1451 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 385 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 444 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 445 cttctgtcagatctggcatgttggccg 471
>ref|NM_106319.3| Arabidopsis thaliana OPR2; 12-oxophytodienoate reductase AT1G76690 (OPR2) mRNA, complete cds Length = 1573 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 341 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 400 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 401 cttctgtcagatctggcatgttggccg 427
>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds Length = 1119 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 249 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 308 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 309 cttctgtcagatctggcatgttggccg 335
>gb|BT025251.1| Arabidopsis thaliana At1g76690 mRNA, complete cds Length = 1125 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 255 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 314 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 315 cttctgtcagatctggcatgttggccg 341
>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase Length = 1311 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 314 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 373 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 374 cttctgtcagatctggcatgttggccg 400
>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds Length = 1252 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 319 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 378 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 379 cttctgtcagatctggcatgttggccg 405
>emb|BX813593.1|CNS0ACEC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1264 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 309 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 368 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 369 cttctgtcagatctggcatgttggccg 395
>emb|BX813470.1|CNS0ACCC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 386 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 445 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 446 cttctgtcagatctggcatgttggccg 472
>emb|BX814348.1|CNS0ABZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 308 agagcatgtagaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 367 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 368 cttctgtcagatctggcatgttggccg 394
>emb|BX816752.1|CNS0ABN0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 341 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 400 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 401 cttctgtcagatctggcatgttggccg 427
>emb|BX816748.1|CNS0ABM5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1226 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 294 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 353 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 354 cttctgtcagatctggcatgttggccg 380
>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete sequence Length = 87684 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 16174 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 16233 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 16234 cttctgtcagatctggcatgttggccg 16260 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 14098 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 14157 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 14158 cttctgtcagatctggcatgttggccg 14184
>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence Length = 1280 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 319 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 378 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 379 cttctgtcagatctggcatgttggccg 405
>dbj|AK117738.1| Arabidopsis thaliana At1g76690 mRNA for putative 12-oxophytodienoate reductase (OPR2), complete cds, clone: RAFL17-42-I17 Length = 1313 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 315 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 374 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 375 cttctgtcagatctggcatgttggccg 401
>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and 12-oxophytodienoate reductase OPR2 genes, complete cds Length = 7079 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 5768 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 5827 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 5828 cttctgtcagatctggcatgttggccg 5854 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcat 394 |||||| || |||||||||||||| ||||| ||||| || || ||||| || | || | Sbjct: 3692 agagcatgtggaggcatggaagccaatcgttgatgctgtacatgccaaaggtggtatctt 3751 Query: 395 cttctgccagatctggcatgtcggccg 421 |||||| |||||||||||||| ||||| Sbjct: 3752 cttctgtcagatctggcatgttggccg 3778
>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full insert sequence Length = 2710 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 371 cgtgcacgccaagggcgcgctcatcttctgccagatctggca 412 |||||||||||||||||| || ||||||||||||| ||||| Sbjct: 451 cgtgcacgccaagggcgccgtcttcttctgccagatatggca 492
>gb|AE008965.1| Agrobacterium tumefaciens str. C58 AT plasmid section 40 of 49 of the complete sequence Length = 11039 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 cggatcgtcctggccccgctcacccgc 188 ||||||||| ||||||||||||||||| Sbjct: 4444 cggatcgtcatggccccgctcacccgc 4470
>gb|AE007913.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 41 of 50 of the complete sequence Length = 6885 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 cggatcgtcctggccccgctcacccgc 188 ||||||||| ||||||||||||||||| Sbjct: 1642 cggatcgtcatggccccgctcacccgc 1668
>ref|NM_001035985.1| Arabidopsis thaliana 12-oxophytodienoate reductase AT1G17990 transcript variant AT1G17990.2 mRNA, complete cds Length = 1406 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 463 gaggcatggaagcccatcgtggatgc 488
>ref|NM_101664.3| Arabidopsis thaliana 12-oxophytodienoate reductase AT1G17990 transcript variant AT1G17990.1 mRNA, complete cds Length = 1431 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 487 gaggcatggaagcccatcgtggatgc 512
>ref|NM_179352.1| Arabidopsis thaliana 12-oxophytodienoate reductase AT1G18020 mRNA, complete cds Length = 1156 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 250 gaggcatggaagcccatcgtggatgc 275
>gb|AY063976.1| Arabidopsis thaliana At1g17990 mRNA sequence Length = 1410 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 487 gaggcatggaagcccatcgtggatgc 512
>dbj|AK221691.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-08-G02 Length = 1461 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 456 gaggcatggaagcccatcgtggatgc 481
>gb|AF344314.1| Arabidopsis thaliana clone C00076 (f) putative 12-oxophytodienoate reductase (At1g17990) mRNA, complete cds Length = 1112 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 250 gaggcatggaagcccatcgtggatgc 275
>emb|BX813872.1|CNS0ACC7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1401 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 333 gaggcatggaagcccatcgtggatgc 358
>emb|BX814454.1|CNS0AANP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1244 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 392 gaggcatggaagcccatcgtggatgc 417
>gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 81129 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 8923 gaggcatggaagcccatcgtggatgc 8948
>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1, complete sequence Length = 75133 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 74193 gaggcatggaagcccatcgtggatgc 74168
>dbj|AK118160.1| Arabidopsis thaliana At1g18020 mRNA for unknown protein, complete cds, clone: RAFL19-47-N03 Length = 1215 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gaggcatggaagcccatcgtcgatgc 370 |||||||||||||||||||| ||||| Sbjct: 272 gaggcatggaagcccatcgtggatgc 297
>ref|XM_363428.1| Magnaporthe grisea 70-15 hypothetical protein (MG01354.4) partial mRNA Length = 2943 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 gctcatcaccgaggccaccggcgtc 287 ||||||| ||||||||||||||||| Sbjct: 1945 gctcatcgccgaggccaccggcgtc 1921
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 atcttcttcttcctatcacacgagctagctagc 49 |||||||||||| | ||| |||||||||||||| Sbjct: 36063911 atcttcttcttcttctcagacgagctagctagc 36063943
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 atcttcttcttcctatcacacgagctagctagc 49 |||||||||||| | ||| |||||||||||||| Sbjct: 125422 atcttcttcttcttctcagacgagctagctagc 125454
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 tgctcatcaccgaggccaccg 282 ||||||||||||||||||||| Sbjct: 2210054 tgctcatcaccgaggccaccg 2210074
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 atcttcttcttcctatcacacgagctagctagc 49 |||||||||||| | ||| |||||||||||||| Sbjct: 36153985 atcttcttcttcttctcagacgagctagctagc 36154017
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 gtcgatgccgtgcacgccaagggcg 387 |||||||||||||| |||||||||| Sbjct: 1270811 gtcgatgccgtgcatgccaagggcg 1270835 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 catcgtcgatgccgtgcacg 378 |||||||||||||||||||| Sbjct: 964164 catcgtcgatgccgtgcacg 964145
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tcgtcgatgccgtgcacgcc 380 |||||||||||||||||||| Sbjct: 2980717 tcgtcgatgccgtgcacgcc 2980736
>ref|XM_413944.1| PREDICTED: Gallus gallus similar to FERM domain containing 3; band 4.1-like protein 4; protein 4.1O (LOC415576), mRNA Length = 10677 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gccgcagccacacgctgcagtgta 232 |||||||||||| ||||||||||| Sbjct: 6284 gccgcagccacaggctgcagtgta 6307
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tcgtcgatgccgtgcacgcc 380 |||||||||||||||||||| Sbjct: 124909 tcgtcgatgccgtgcacgcc 124928
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tcgtcgatgccgtgcacgcc 380 |||||||||||||||||||| Sbjct: 212894 tcgtcgatgccgtgcacgcc 212913
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcaccgaggccaccggcg 285 |||||||||||||||||||| Sbjct: 195642 catcaccgaggccaccggcg 195623
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 335 agagcacgtcgaggcatggaagcccatcgtcgatgc 370 |||||| |||||||||||||| ||||| || ||||| Sbjct: 54449 agagcatgtcgaggcatggaaacccattgtggatgc 54414
>dbj|AK127787.1| Homo sapiens cDNA FLJ45888 fis, clone OCBBF3022123 Length = 4072 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aacttcagctcttcaacaat 106 |||||||||||||||||||| Sbjct: 2896 aacttcagctcttcaacaat 2915
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 agctagctagcagctgccgc 58 |||||||||||||||||||| Sbjct: 69010 agctagctagcagctgccgc 69029
>gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, complete sequence Length = 202566 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aacttcagctcttcaacaat 106 |||||||||||||||||||| Sbjct: 150580 aacttcagctcttcaacaat 150561
>gb|S65123.1| lip=extracellular lipase [Aeromonas hydrophila, H3, Genomic, 2842 nt] Length = 2842 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ccgcagccacacgctgcagtgtac 233 ||||||||||||||||||| |||| Sbjct: 2510 ccgcagccacacgctgcagagtac 2533
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 agctagctagcagctgccgc 58 |||||||||||||||||||| Sbjct: 12851840 agctagctagcagctgccgc 12851821
>gb|AY611523.1| Schistocerca americana delta-like protein mRNA, partial cds Length = 675 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 ctccgacacggcacagggataccg 310 |||||||||||||||||| ||||| Sbjct: 291 ctccgacacggcacagggctaccg 314
>gb|AC008044.4|AC008044 Homo sapiens chromosome 14 BAC containing genes for ABH and nuclear receptor coactivator NCoA-62, complete sequence Length = 125304 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gtcctggccccgctcacccg 187 |||||||||||||||||||| Sbjct: 34448 gtcctggccccgctcacccg 34467
>emb|BX005039.11| Mouse DNA sequence from clone RP23-391M18 on chromosome 2, complete sequence Length = 145263 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggccagctcgaccttgccca 160 |||||||||||||||||||| Sbjct: 2206 ggccagctcgaccttgccca 2187
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 agctagctagcagctgccgc 58 |||||||||||||||||||| Sbjct: 12859180 agctagctagcagctgccgc 12859161
>emb|AL672273.9| Mouse DNA sequence from clone RP23-15A12 on chromosome 2, complete sequence Length = 202965 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gctcatcttctgccagatct 408 |||||||||||||||||||| Sbjct: 68469 gctcatcttctgccagatct 68450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,420,573 Number of Sequences: 3902068 Number of extensions: 3420573 Number of successful extensions: 50477 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49943 Number of HSP's gapped (non-prelim): 500 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
