Clone Name | bart59g06 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YEM7_YEAST (P40025) Hypothetical 37.7 kDa protein in PIP1-GLN3 i... | 32 | 1.0 | 2 | SYT_IDILO (Q5QYN4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... | 29 | 6.6 |
---|
>YEM7_YEAST (P40025) Hypothetical 37.7 kDa protein in PIP1-GLN3 intergenic| region Length = 321 Score = 31.6 bits (70), Expect = 1.0 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Frame = +2 Query: 134 DLDDTLYPGNTGIGPALRRNIDEFLVXXXXXXXXXXXXXXXXXXXSHGSTLAGLIALGHD 313 D+D+TLY +T + +++++ F +G ++ GLI Sbjct: 58 DIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQI 117 Query: 314 VHPDEYHSYVHGRLP-YDVIAADPQLAAALQSMPQRKI-------LFTNSDRAH 451 +Y++++ LP D + D +L L ++ ++K+ LFTNS + H Sbjct: 118 DDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNH 171
>SYT_IDILO (Q5QYN4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 638 Score = 28.9 bits (63), Expect = 6.6 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -3 Query: 210 TRNSSMLRLSAGPMPVLPGYSVSSRSMRRQSKGEVTGDWNAMAGELAARSRG 55 T N +R SA G+ + +++R V GD AGE+A R+RG Sbjct: 561 TLNEKGIRASADLRNEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAVRTRG 612 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,197,348 Number of Sequences: 219361 Number of extensions: 521027 Number of successful extensions: 1710 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1697 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1710 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)