>PMA1_YEAST (P05030) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 918

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
 Frame = +3

Query: 9   DRTPQPPSSIPATTRAHTRSRERGL-----ARSLAGDDDDIDVQIQAGMAVYIRLDDAVR 173
           D +    SS  ++  AH  ++E+       A S + DDDDID  I+              
Sbjct: 3   DTSSSSSSSSASSVSAHQPTQEKPAKTYDDAASESSDDDDIDALIE-------------- 48

Query: 174 ARLRGDGGCTSSGSDHDASACLSD---LVQAFLETDPAAG 284
             L+ + G     SD+D      +   + + +L+TDP+ G
Sbjct: 49  -ELQSNHGVDDEDSDNDGPVAAGEARPVPEEYLQTDPSYG 87

>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +3

Query: 9   DRTPQPPSSIPATTRAHTRS-RERGLARSLAGDDDDIDVQIQAGMAVYIRLDDAVRARLR 185
           ++ P P    P+          E+GL R L G  D + ++I  G A     DDA   R+ 
Sbjct: 462 EKVPVPTVVRPSALELKVEELEEKGLIRILRGPGDVVSIEILPGAAATPSGDDAQAPRVS 521

Query: 186 GDGGCTSSGSDHDAS 230
            D   T+      AS
Sbjct: 522 TDSPSTAESIPEAAS 536

>MUTS_ZYMMO (Q5NL79) DNA mismatch repair protein mutS|
          Length = 891

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
 Frame = +3

Query: 21   QPPSSIPATTRAHTRSRE--------RGLARSLAGDDDDIDVQIQAGMA-VYIRLDDAVR 173
            Q  S +PA +  H R++E          +A   A     I+V   AG+  V ++    V 
Sbjct: 760  QLTSRLPALSLHHVRAKEWQGDLVLLHEMAEGAADRSYGIEVARLAGLPPVVLKRASEVL 819

Query: 174  ARLRGDGGCTSSGSDHDASACLSDL----VQAF 260
            A+L       SSG ++D+SA LSDL    VQAF
Sbjct: 820  AQLEN-----SSGKNNDSSANLSDLPLFGVQAF 847

>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box|
           protein 54)
          Length = 874

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +3

Query: 18  PQPPS--SIPATTRAHTRSRERGLARSLAGDDDDIDVQIQAGMAVYIRLDDAVRARLRGD 191
           P PPS  ++    +   R R  G ++    D DD + +IQA        +D  RAR  G 
Sbjct: 9   PGPPSRPTMAPWKKKRLRKRRTGASQGRDSDSDDGEFEIQA--------EDDARARKLGP 60

Query: 192 GGCTSSGSDHDASACLSDL 248
           G    S      S C+SD+
Sbjct: 61  GRALPS---FPTSECVSDV 76

>CWC26_MAGGR (Q52F10) Pre-mRNA-splicing factor CWC26|
          Length = 352

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 186 GDGGCTSSGSDHDASACLSDLVQAFLETDPAAGQGDEAP 302
           G GG + + +DH+A+A  + L  A  E+  A    D+AP
Sbjct: 89  GGGGSSKTNTDHEAAAADAILASAAAESAAARDAEDDAP 127

>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 6    RDRTPQPPSSIPATTRAHTRSRERGLARSLAGDDDDIDVQIQAGMAVYIRLDDAVRARLR 185
            RD    P  S P  + + TR R+  + +    D  D+ V+       Y+R  D    +  
Sbjct: 1191 RDILSPPKDSRPGLSDSKTRLRDLKVMKLAGTDISDVAVRYITQSLPYLRHLDLSSCQRI 1250

Query: 186  GDGGCTSSGSDHDASACLSDL 248
             D G    G+   A+A L++L
Sbjct: 1251 TDAGVAQIGTSTTATARLTEL 1271

>L2MU_ADE40 (Q64858) Late L2 mu core protein precursor (pMu) (Protein X) (pX)|
          Length = 70

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 332 VPVPSFRGRAGRLVPLAGGGVR 267
           +PVPS+RGR+ R   +AG G R
Sbjct: 9   IPVPSYRGRSRRRRGMAGSGRR 30

>NHL1_CAEEL (Q03601) RING finger protein nhl-1|
          Length = 974

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
 Frame = +3

Query: 12  RTPQPPSSIPATTRAHTRS---------RERGLARSLAGDDDDIDVQIQAGMAVYIRLDD 164
           + P PP S+    R    S         R+  L R  + +DD ++ +++     + +  D
Sbjct: 468 KPPLPPQSVERVERTEDASPAPLPQLPIRKPPLPRQQSSNDDSLNEKVETIRRAHQQRQD 527

Query: 165 AVRARLRGDGGCTSSGSDHDAS 230
           A RA  R      S G D   S
Sbjct: 528 ASRAASRAVSSEESEGEDFPVS 549

>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog|
          Length = 556

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 174 ARLRGDGGCTSSGSDHDASACLSDLVQAFLETD 272
           +RLRG      SGSD +    + D+  A LE+D
Sbjct: 8   SRLRGALSSVESGSDDEIQQMIKDICSALLESD 40

>MURB_XANC5 (Q3BUJ8) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 350

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 98  GERASETPLSASCVRARCGWNGAR 27
           GE+A +  LSA+ +  +CGW G R
Sbjct: 272 GEQAGQGKLSAAWLIEQCGWKGRR 295

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 9   DRTPQPPSSIPATTRAHTRS 68
           DRTP PP S+P +T   T S
Sbjct: 347 DRTPPPPPSVPPSTSTSTTS 366

>CSP_PLAKU (P04922) Circumsporozoite protein precursor (CS)|
          Length = 351

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 174 ARLRGDGGCTSSGSDHDASACLSDLVQAFLETD-PAAGQGDEAPGPAPK 317
           A  RG+     +G +  A+    +   A    + PAAG G E P PAP+
Sbjct: 183 AGARGEQPAAGAGGEQPAAGAGGEQPAAGARGEQPAAGAGGEQPAPAPR 231

>MURB_XANAC (Q8PLJ3) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 350

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 98  GERASETPLSASCVRARCGWNGAR 27
           GE A +  LSA+ +  +CGW G R
Sbjct: 272 GEHAGQGKLSAAWLIEQCGWKGKR 295

>CAAL1_NOCFA (Q5YW64) Carboxylate-amine ligase nfa27300 (EC 6.3.-.-)|
          Length = 383

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
 Frame = +3

Query: 156 LDDAVRARL-RGDGG---CTSSGSDHDASACLSDLVQAFLE---TDPA-AGQGDEAP 302
           + DA+ A L RG+G      + G+DHD +A +++L  A LE    +PA +G G+  P
Sbjct: 322 VSDALTALLARGNGAQRQVRAFGADHDVAAVIAELGAATLEGCAPEPANSGGGEHVP 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.128    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,975,099
Number of Sequences: 219361
Number of extensions: 556036
Number of successful extensions: 2153
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)