ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 143 2e-34
2PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor (Po... 55 7e-08
3PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor (Po... 55 9e-08
4PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor (Po... 55 9e-08
5PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor (Po... 53 3e-07
6PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor (Polyg... 51 1e-06
7PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor (Po... 51 1e-06
8EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 39 0.004
9BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 39 0.007
10DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 39 0.007
11TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 34 0.16
12PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog) 28 6.9
13YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 28 6.9
14PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 28 9.0
15GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precu... 28 9.0

>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score =  143 bits (360), Expect = 2e-34
 Identities = 66/78 (84%), Positives = 73/78 (93%)
 Frame = +3

Query: 192 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 371
           RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G
Sbjct: 26  RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85

Query: 372 QIPSALAGLTALMSLSLF 425
           QIPSA+AGLTALMSLSLF
Sbjct: 86  QIPSAVAGLTALMSLSLF 103



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>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 342

 Score = 55.1 bits (131), Expect = 7e-08
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90

Query: 360 -DVHGQIPSALAGLTAL 407
                 IPS+LA L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3)
          Length = 342

 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90

Query: 360 -DVHGQIPSALAGLTAL 407
                 IPS+LA L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 342

 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90

Query: 360 -DVHGQIPSALAGLTAL 407
                 IPS+LA L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 330

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 362
           C + D+  LL++K++L NP  L +W P   DCC+W  L C +A    RV ++ I DG  +
Sbjct: 25  CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81

Query: 363 VHGQIPSALAGLTALMSL 416
           + GQIP  +  L  L SL
Sbjct: 82  ISGQIPPEVGDLPYLTSL 99



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>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor|
           (Polygalacturonase-inhibiting protein)
          Length = 330

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 371
           C   D++ LL++K+A G+P  L +W  +  DCC W  + CD    R+N++ I  A  V G
Sbjct: 27  CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84

Query: 372 QIPSALAGLTALMSL 416
           QIP+ +  L  L +L
Sbjct: 85  QIPALVGDLPYLETL 99



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>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 330

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 365
           C Q D+  LL++K++L NP  L +W P   DCC+W  L C +A    RV  + I  +  +
Sbjct: 25  CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82

Query: 366 HGQIPSALAGLTALMSL 416
            GQIP+ +  L  L +L
Sbjct: 83  SGQIPAEVGDLPYLETL 99



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +3

Query: 204 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 380
           ++  +L+  K++L NP+ L +W+  +SA  C W  + C   GRVN++ +     + GQIP
Sbjct: 25  SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82

Query: 381 SALAGLTALMSLSL 422
             ++ L  L  L L
Sbjct: 83  KEISSLKNLRELCL 96



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 24/98 (24%)
 Frame = +3

Query: 204 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGA-------- 356
           A+  AL  +K +L +P   L++W       CTW H+ C+    V  V +  A        
Sbjct: 27  AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVM 86

Query: 357 ---------------DDVHGQIPSALAGLTALMSLSLF 425
                          +++ G IP  L  LT L+SL L+
Sbjct: 87  QLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLY 124



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCTWDHLRCD-EAGRVNNVFIDGADD- 362
           C   D+ AL   K +L  P      TWS  +  C  W  + CD ++GRV ++ + G  + 
Sbjct: 27  CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESED 86

Query: 363 -----------VHGQIPSALAGLTALMSLSL 422
                      + G I  A+  LTAL SL L
Sbjct: 87  AIFQKAGRSGYMSGSIDPAVCDLTALTSLVL 117



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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = +3

Query: 207 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSA 386
           D  A+L +K++L NP +   WS    D C W H+ C    RV  + I G   + G +   
Sbjct: 28  DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83

Query: 387 LAGLTALMSLSL 422
           L  L+ L  L L
Sbjct: 84  LRNLSELERLEL 95



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>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -1

Query: 379  GIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVFSVA--GLPSACFTRSSACRS 206
            G  PC  S+ S  +L   P+S   R S V Q   +G    +    GLPS+  + SS    
Sbjct: 2144 GFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIP 2201

Query: 205  ACGH 194
            AC H
Sbjct: 2202 ACKH 2205



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>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -1

Query: 415 SDMSAVSPAKADGIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPS 239
           S  S +S + A  I   +SS+P   + FT PASS    S V  S+  +     S+    S
Sbjct: 44  SSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSS 103

Query: 238 ACFTRSSA 215
           A  T SS+
Sbjct: 104 ATLTSSSS 111



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 270 SPASADCCTWDHLRC--DEAGRVNNVFIDGADDVHGQIPSALAGLTALMSLSL 422
           S +S DCC W  + C  +  GRV  + + G   + G++  +L  L  +  L+L
Sbjct: 56  SSSSTDCCNWTGITCNSNNTGRVIRLEL-GNKKLSGKLSESLGKLDEIRVLNL 107



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>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor|
          Length = 476

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 204 ADRQALLRVKQALGN--PATLKTWSPASADCCTWDHLRCDEAG 326
           A ++  L V QA     PA   TW+   +D C+W+H+ C  +G
Sbjct: 41  AQQKNTLTVLQAFARAIPALGDTWT--GSDFCSWEHIICYSSG 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,758,645
Number of Sequences: 219361
Number of extensions: 369149
Number of successful extensions: 1486
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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