ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 268 1e-68
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 268 1e-68
3dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 5e-62
4dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
6dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
7dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
8ref|XM_512475.1| PREDICTED: Pan troglodytes similar to myosin IX... 44 0.40
9ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA 44 0.40
10gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, com... 44 0.40
11gb|AC092476.1|AC092476 Homo sapiens chromosome 19 clone LLNLR-23... 44 0.40
12dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, par... 44 0.40
13gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds 44 0.40
14gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 1.6
15dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 1.6
16gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.3
17ref|XM_844545.1| PREDICTED: Canis familiaris similar to growth f... 40 6.3
18emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chrom... 40 6.3
19gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
20gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.3
21gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.3
22gb|U18777.1|MAU18777 Mycobacterium avium plasmid pLR7 Rep gene, ... 40 6.3

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  268 bits (135), Expect = 1e-68
 Identities = 296/350 (84%)
 Strand = Plus / Plus

                                                                         
Query: 115   cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 174
             ||||||| ||||||||||||| ||||||  ||| |||  ||||||| |||||   |||||
Sbjct: 88573 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 88632

                                                                         
Query: 175   gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 234
             |||||| ||||| ||||  ||  ||| ||||||||| ||||| |  |||||| |||| ||
Sbjct: 88633 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 88692

                                                                         
Query: 235   ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 294
             |||||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||||||
Sbjct: 88693 ggtggactgcgaggccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 88752

                                                                         
Query: 295   gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagccgtcccc 354
             || |||||||||||| ||||     || |||||||||||||||| ||||  |||||| ||
Sbjct: 88753 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 88812

                                                                         
Query: 355   ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 414
             ||  || || |||||||||||  ||||||||||||||||||| ||||||| |||||||||
Sbjct: 88813 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 88872

                                                               
Query: 415   cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
             | |||| ||| |||||||||||||||||||  ||||||||||||||||||
Sbjct: 88873 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcc 88922



 Score =  236 bits (119), Expect = 5e-59
 Identities = 295/354 (83%)
 Strand = Plus / Plus

                                                                         
Query: 110   ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
             ||||| |||||||||||||||||||| ||||||  ||| |||  |||||||  |||||  
Sbjct: 91061 ccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtg 91120

                                                                         
Query: 170   ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
             ||||||||||| ||||| ||||| || |||| ||||||||| ||||| |  |||||| ||
Sbjct: 91121 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacg 91180

                                                                         
Query: 230   ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcg 289
             |||||||||||||||||  ||||||||||||| |||||||||||| | || ||||||| |
Sbjct: 91181 ctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcggg 91240

                                                                         
Query: 290   tccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagccg 349
             ||||||| |||||||||| | ||||  |  | ||||  || ||||||| |||||  ||| 
Sbjct: 91241 tccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgcca 91300

                                                                         
Query: 350   tccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtc 409
             |||||||  || || |||| |||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 91301 tccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtc 91360

                                                                   
Query: 410   agcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgc 463
             |   | ||||| ||| |||||||||||||||| ||| |||||||||||||||||
Sbjct: 91361 acggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgc 91414



 Score =  192 bits (97), Expect = 7e-46
 Identities = 291/356 (81%)
 Strand = Plus / Plus

                                                                         
Query: 109   cccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacggg 168
             ||||||||||||| |||||||||||   |||||| ||||||||  ||||||| |||||  
Sbjct: 95445 cccgagcgccgtgctgctgccggtggacaaggacggcgcaacgcagcagtacgtgacgat 95504

                                                                         
Query: 169   cttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctc 228
              ||| ||||||| |||||    || || |||| ||||||| | ||||| |  ||||||  
Sbjct: 95505 gttctggcagcggacgccgagtgtgcccgtgaaggccgtggttgacctcgcgggcgccat 95564

                                                                         
Query: 229   gctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgc 288
             ||||||||||||||||||  ||||||||| ||| ||||| || ||| |||||||||||| 
Sbjct: 95565 gctctgggtggactgcgagtccgggtacgagtcgtcgtcgtatgcgcgcgtgccgtgcgg 95624

                                                                         
Query: 289   gtccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagcc 348
             ||||||||  ||||||||||||||||| |  ||||| |||||| |||||  |||   | |
Sbjct: 95625 gtccaagccttgccgcctcgcgaagagcgccgcctgtgccaccggctgctccggtgcggc 95684

                                                                         
Query: 349   gtccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgt 408
             ||||||||| || || ||||||||||| | ||||||||||||| ||||  ||||||||||
Sbjct: 95685 gtccccgggctgcctcaacgacacctgcaccgggttcccggagtacactatcacgcgcgt 95744

                                                                     
Query: 409   cagcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
             |||||||||||| ||| ||||||| |||  ||||||| ||  |||||||| |||||
Sbjct: 95745 cagcaccggcggcaacatcatcacagacaagctgtcgctgtacaccacctgccgcc 95800



 Score =  147 bits (74), Expect = 4e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                          
Query: 110    ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
              |||||| ||||||||||||||||||| ||||||  ||| |||  ||||||| |||||   
Sbjct: 102448 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 102507

                                                                          
Query: 170    ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
              ||||||||||| ||||| ||||| || |||| ||||||||| ||||| |  ||| ||  |
Sbjct: 102508 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 102567

                                                                        
Query: 230    ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 287
              |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 102568 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 102625



 Score =  127 bits (64), Expect = 3e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                          
Query: 365    aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 424
              ||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| |||
Sbjct: 102703 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 102762

                                                      
Query: 425    ctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
               |||||||||||||||||||| ||||||||||||||||||
Sbjct: 102763 atcatcaccgacgtgctgtcgctgcccaccaccttccgcc 102802



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  268 bits (135), Expect = 1e-68
 Identities = 296/350 (84%)
 Strand = Plus / Plus

                                                                            
Query: 115      cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 174
                ||||||| ||||||||||||| ||||||  ||| |||  ||||||| |||||   |||||
Sbjct: 19487861 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 19487920

                                                                            
Query: 175      gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 234
                |||||| ||||| ||||  ||  ||| ||||||||| ||||| |  |||||| |||| ||
Sbjct: 19487921 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 19487980

                                                                            
Query: 235      ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 294
                |||||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||||||
Sbjct: 19487981 ggtggactgcgaggccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 19488040

                                                                            
Query: 295      gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagccgtcccc 354
                || |||||||||||| ||||     || |||||||||||||||| ||||  |||||| ||
Sbjct: 19488041 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 19488100

                                                                            
Query: 355      ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 414
                ||  || || |||||||||||  ||||||||||||||||||| ||||||| |||||||||
Sbjct: 19488101 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 19488160

                                                                  
Query: 415      cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
                | |||| ||| |||||||||||||||||||  ||||||||||||||||||
Sbjct: 19488161 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcc 19488210



 Score =  236 bits (119), Expect = 5e-59
 Identities = 295/354 (83%)
 Strand = Plus / Plus

                                                                            
Query: 110      ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
                ||||| |||||||||||||||||||| ||||||  ||| |||  |||||||  |||||  
Sbjct: 19490349 ccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtg 19490408

                                                                            
Query: 170      ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
                ||||||||||| ||||| ||||| || |||| ||||||||| ||||| |  |||||| ||
Sbjct: 19490409 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacg 19490468

                                                                            
Query: 230      ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcg 289
                |||||||||||||||||  ||||||||||||| |||||||||||| | || ||||||| |
Sbjct: 19490469 ctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcggg 19490528

                                                                            
Query: 290      tccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagccg 349
                ||||||| |||||||||| | ||||  |  | ||||  || ||||||| |||||  ||| 
Sbjct: 19490529 tccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgcca 19490588

                                                                            
Query: 350      tccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtc 409
                |||||||  || || |||| |||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 19490589 tccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtc 19490648

                                                                      
Query: 410      agcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgc 463
                |   | ||||| ||| |||||||||||||||| ||| |||||||||||||||||
Sbjct: 19490649 acggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgc 19490702



 Score =  192 bits (97), Expect = 7e-46
 Identities = 291/356 (81%)
 Strand = Plus / Plus

                                                                            
Query: 109      cccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacggg 168
                ||||||||||||| |||||||||||   |||||| ||||||||  ||||||| |||||  
Sbjct: 19494733 cccgagcgccgtgctgctgccggtggacaaggacggcgcaacgcagcagtacgtgacgat 19494792

                                                                            
Query: 169      cttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctc 228
                 ||| ||||||| |||||    || || |||| ||||||| | ||||| |  ||||||  
Sbjct: 19494793 gttctggcagcggacgccgagtgtgcccgtgaaggccgtggttgacctcgcgggcgccat 19494852

                                                                            
Query: 229      gctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgc 288
                ||||||||||||||||||  ||||||||| ||| ||||| || ||| |||||||||||| 
Sbjct: 19494853 gctctgggtggactgcgagtccgggtacgagtcgtcgtcgtatgcgcgcgtgccgtgcgg 19494912

                                                                            
Query: 289      gtccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagcc 348
                ||||||||  ||||||||||||||||| |  ||||| |||||| |||||  |||   | |
Sbjct: 19494913 gtccaagccttgccgcctcgcgaagagcgccgcctgtgccaccggctgctccggtgcggc 19494972

                                                                            
Query: 349      gtccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgt 408
                ||||||||| || || ||||||||||| | ||||||||||||| ||||  ||||||||||
Sbjct: 19494973 gtccccgggctgcctcaacgacacctgcaccgggttcccggagtacactatcacgcgcgt 19495032

                                                                        
Query: 409      cagcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
                |||||||||||| ||| ||||||| |||  ||||||| ||  |||||||| |||||
Sbjct: 19495033 cagcaccggcggcaacatcatcacagacaagctgtcgctgtacaccacctgccgcc 19495088



 Score =  147 bits (74), Expect = 4e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                            
Query: 110      ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
                |||||| ||||||||||||||||||| ||||||  ||| |||  ||||||| |||||   
Sbjct: 19501736 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 19501795

                                                                            
Query: 170      ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
                ||||||||||| ||||| ||||| || |||| ||||||||| ||||| |  ||| ||  |
Sbjct: 19501796 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 19501855

                                                                          
Query: 230      ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 287
                |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 19501856 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 19501913



 Score =  127 bits (64), Expect = 3e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                            
Query: 365      aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 424
                ||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| |||
Sbjct: 19501991 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 19502050

                                                        
Query: 425      ctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
                 |||||||||||||||||||| ||||||||||||||||||
Sbjct: 19502051 atcatcaccgacgtgctgtcgctgcccaccaccttccgcc 19502090



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>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full
           insert sequence
          Length = 1474

 Score =  246 bits (124), Expect = 5e-62
 Identities = 294/350 (84%), Gaps = 2/350 (0%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 174
           ||||||| ||||||||||||| ||||||  ||| |||  ||||||| |||||   |||||
Sbjct: 143 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 202

                                                                       
Query: 175 gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 234
           |||||| ||||| ||||  ||  ||| ||||||||| ||||| |  |||||| |||| ||
Sbjct: 203 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 262

                                                                       
Query: 235 ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 294
           ||||||||| |  |||||||||||||| ||||| |||||| |||||||||||| ||||||
Sbjct: 263 ggtggactgag--gccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 320

                                                                       
Query: 295 gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcnagccgtcccc 354
           || |||||||||||| ||||     || |||||||||||||||| ||||  |||||| ||
Sbjct: 321 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 380

                                                                       
Query: 355 ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 414
           ||  || || |||||||||||  ||||||||||||||||||| ||||||| |||||||||
Sbjct: 381 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 440

                                                             
Query: 415 cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
           | |||| ||| |||||||||||||||||||  ||||||||||||||||||
Sbjct: 441 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcc 490



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>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full
           insert sequence
          Length = 1741

 Score =  147 bits (74), Expect = 4e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                       
Query: 110 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
           |||||| ||||||||||||||||||| ||||||  ||| |||  ||||||| |||||   
Sbjct: 327 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 386

                                                                       
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
           ||||||||||| ||||| ||||| || |||| ||||||||| ||||| |  ||| ||  |
Sbjct: 387 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 446

                                                                     
Query: 230 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 287
           |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 447 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 504



 Score =  127 bits (64), Expect = 3e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                       
Query: 365 aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 424
           ||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| |||
Sbjct: 582 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 641

                                                   
Query: 425 ctcatcaccgacgtgctgtcggtgcccaccaccttccgcc 464
            |||||||||||||||||||| ||||||||||||||||||
Sbjct: 642 atcatcaccgacgtgctgtcgctgcccaccaccttccgcc 681



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 119/148 (80%), Gaps = 9/148 (6%)
 Strand = Plus / Plus

                                                                            
Query: 170      ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 226
                |||| |||||||||||| | |||  |||||| ||||||| | |||||    || ||||||
Sbjct: 15504957 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 15505016

                                                                            
Query: 227      tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 280
                 |||||||||||||||||||      ||||||||||| ||| || || ||||| ||||||
Sbjct: 15505017 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 15505076

                                            
Query: 281      ccgtgcgcgtccaagctgtgccgcctcg 308
                || |||| ||||||||  ||||||||||
Sbjct: 15505077 ccatgcgggtccaagccctgccgcctcg 15505104



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 429      tcaccgacgtgctgtcggtgcccaccaccttcc 461
                ||||||||||||||||| |||||||||||||||
Sbjct: 15505234 tcaccgacgtgctgtcgctgcccaccaccttcc 15505266



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>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 119/148 (80%), Gaps = 9/148 (6%)
 Strand = Plus / Plus

                                                                         
Query: 170   ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 226
             |||| |||||||||||| | |||  |||||| ||||||| | |||||    || ||||||
Sbjct: 25812 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 25871

                                                                         
Query: 227   tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 280
              |||||||||||||||||||      ||||||||||| ||| || || ||||| ||||||
Sbjct: 25872 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 25931

                                         
Query: 281   ccgtgcgcgtccaagctgtgccgcctcg 308
             || |||| ||||||||  ||||||||||
Sbjct: 25932 ccatgcgggtccaagccctgccgcctcg 25959



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 429   tcaccgacgtgctgtcggtgcccaccaccttcc 461
             ||||||||||||||||| |||||||||||||||
Sbjct: 26089 tcaccgacgtgctgtcgctgcccaccaccttcc 26121



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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 119/148 (80%), Gaps = 9/148 (6%)
 Strand = Plus / Plus

                                                                          
Query: 170    ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 226
              |||| |||||||||||| | |||  |||||| ||||||| | |||||    || ||||||
Sbjct: 154249 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 154308

                                                                          
Query: 227    tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 280
               |||||||||||||||||||      ||||||||||| ||| || || ||||| ||||||
Sbjct: 154309 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 154368

                                          
Query: 281    ccgtgcgcgtccaagctgtgccgcctcg 308
              || |||| ||||||||  ||||||||||
Sbjct: 154369 ccatgcgggtccaagccctgccgcctcg 154396



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                               
Query: 429    tcaccgacgtgctgtcggtgcccaccaccttcc 461
              ||||||||||||||||| |||||||||||||||
Sbjct: 154526 tcaccgacgtgctgtcgctgcccaccaccttcc 154558



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>ref|XM_512475.1| PREDICTED: Pan troglodytes similar to myosin IXB (LOC455819), mRNA
          Length = 2636

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 tgtggcctgcgccaccagctgc 337
           ||||||||||||||||||||||
Sbjct: 542 tgtggcctgcgccaccagctgc 521



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>ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA
          Length = 7488

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 tgtggcctgcgccaccagctgc 337
           ||||||||||||||||||||||
Sbjct: 390 tgtggcctgcgccaccagctgc 369



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>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence
          Length = 174034

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 316    tgtggcctgcgccaccagctgc 337
              ||||||||||||||||||||||
Sbjct: 173127 tgtggcctgcgccaccagctgc 173106



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>gb|AC092476.1|AC092476 Homo sapiens chromosome 19 clone LLNLR-231E1, complete sequence
          Length = 2400

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 tgtggcctgcgccaccagctgc 337
           ||||||||||||||||||||||
Sbjct: 95  tgtggcctgcgccaccagctgc 74



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>dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, partial cds, clone:
           ef05385
          Length = 7607

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 tgtggcctgcgccaccagctgc 337
           ||||||||||||||||||||||
Sbjct: 537 tgtggcctgcgccaccagctgc 516



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>gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds
          Length = 6069

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 tgtggcctgcgccaccagctgc 337
           ||||||||||||||||||||||
Sbjct: 390 tgtggcctgcgccaccagctgc 369



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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 11      ctctgccagccagccctcagc 31
               |||||||||||||||||||||
Sbjct: 2946487 ctctgccagccagccctcagc 2946467



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 110     ccgagcgccgtggtgctgccggtga 134
               ||||||||||||||||||| |||||
Sbjct: 1844748 ccgagcgccgtggtgctgctggtga 1844772



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     aggtcccggtgacggccgtg 208
               ||||||||||||||||||||
Sbjct: 3188471 aggtcccggtgacggccgtg 3188490



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>ref|XM_844545.1| PREDICTED: Canis familiaris similar to growth factor receptor-bound
           protein 10 isoform a (LOC607755), mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 cgcgcgtcagcaccggcggg 421
           ||||||||||||||||||||
Sbjct: 328 cgcgcgtcagcaccggcggg 309



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>emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chromosome 14, complete
              sequence
          Length = 239515

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     tctgccagccagccctcagc 31
              ||||||||||||||||||||
Sbjct: 131523 tctgccagccagccctcagc 131504



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      cgtgctcgtgccgcgcggcc 100
               ||||||||||||||||||||
Sbjct: 4935908 cgtgctcgtgccgcgcggcc 4935927



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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    cctacgcgggcgtgccgtgc 286
              ||||||||||||||||||||
Sbjct: 740360 cctacgcgggcgtgccgtgc 740379



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>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940122D9, complete sequence
          Length = 114898

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  tggcctgcgccaccagctgc 337
            ||||||||||||||||||||
Sbjct: 9582 tggcctgcgccaccagctgc 9601



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>gb|U18777.1|MAU18777 Mycobacterium avium plasmid pLR7 Rep gene, complete cds
          Length = 1828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 cctacgcgggcgtgccgtgc 286
           ||||||||||||||||||||
Sbjct: 288 cctacgcgggcgtgccgtgc 307


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,022,308
Number of Sequences: 3902068
Number of extensions: 2022308
Number of successful extensions: 41166
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40692
Number of HSP's gapped (non-prelim): 466
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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