Clone Name
bart59f07
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 ref|NM_194214.1| Oryza sativa (japonica cultivar-group), mRNA
90
7e-15
2 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
90
7e-15
3 dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D...
90
7e-15
4 gb|BT017018.1| Zea mays clone EK07D2312B04.c mRNA sequence
88
3e-14
5 gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet...
44
0.37
6 gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, comp...
44
0.37
7 emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on ch...
44
0.37
8 emb|AL844495.6| Mouse DNA sequence from clone RP23-252L9 on chro...
44
0.37
9 gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
42
1.5
10 gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
42
1.5
11 gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, co...
42
1.5
12 gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, co...
42
1.5
13 gb|BC044833.1| Mus musculus RAB11 family interacting protein 5 (...
42
1.5
14 gb|BC051063.1| Mus musculus RAB11 family interacting protein 5 (...
42
1.5
15 ref|NM_177466.4| Mus musculus RAB11 family interacting protein 5...
42
1.5
16 ref|NM_001003955.2| Mus musculus RAB11 family interacting protei...
42
1.5
17 gb|AC162869.3| Mus musculus chromosome 1, clone RP24-309N24, com...
42
1.5
18 gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Canc...
42
1.5
19 gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, comp...
42
1.5
20 ref|XM_992559.1| PREDICTED: Mus musculus RAB11 family interactin...
42
1.5
21 gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, co...
42
1.5
22 ref|XM_540423.2| PREDICTED: Canis familiaris similar to otopetri...
42
1.5
23 emb|Z70225.1|HSU165H7 Human DNA sequence from clone LL0XNC01-165...
42
1.5
24 emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 12...
42
1.5
25 gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a...
42
1.5
26 dbj|AK145061.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD...
42
1.5
27 dbj|AK154922.1| Mus musculus NOD-derived CD11c +ve dendritic cel...
42
1.5
28 gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cance...
42
1.5
29 dbj|AK129230.1| Mus musculus mRNA for mKIAA0857 protein
42
1.5
30 gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple...
42
1.5
31 gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome...
40
5.7
32 gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence
40
5.7
33 ref|XM_511280.1| PREDICTED: Pan troglodytes similar to ankyrin r...
40
5.7
34 ref|XM_466354.1| Oryza sativa (japonica cultivar-group), mRNA
40
5.7
35 gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, com...
40
5.7
36 ref|XM_616692.2| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
37 ref|XM_878478.1| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
38 ref|XM_878447.1| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
39 ref|XM_866410.1| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
40 ref|XM_878367.1| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
41 ref|XM_878246.1| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
42 ref|XM_878213.1| PREDICTED: Bos taurus similar to heat shock 70k...
40
5.7
43 ref|NM_016376.2| Homo sapiens ankyrin repeat and FYVE domain con...
40
5.7
44 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
40
5.7
45 gb|AC145198.3| Mus musculus BAC clone RP23-396H3 from chromosome...
40
5.7
46 ref|XM_991569.1| PREDICTED: Mus musculus otopetrin 3 (Otop3), mRNA
40
5.7
47 gb|AY386264.1| Orf virus strain OV-SA00, complete genome
40
5.7
48 gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complet...
40
5.7
49 gb|AC139029.10| Mus musculus chromosome 14, clone RP23-393A18, c...
40
5.7
50 gb|BC060812.1| Homo sapiens cDNA clone IMAGE:30339773, containin...
40
5.7
51 emb|AL591415.9| Human DNA sequence from clone RP11-520L11 on chr...
40
5.7
52 gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence
40
5.7
53 emb|AL359455.22| Human DNA sequence from clone RP11-444K11 on ch...
40
5.7
54 emb|AL158075.11| Human DNA sequence from clone RP11-348K2 on chr...
40
5.7
55 emb|X03020.1|MMGMCSFG Mouse gene for granulocyte-macrophage colo...
40
5.7
56 emb|CR933717.1| Homo sapiens mRNA; cDNA DKFZp686M19106 (from clo...
40
5.7
57 gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, com...
40
5.7
58 emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on ch...
40
5.7
59 gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, co...
40
5.7
60 gb|AF299253.2| Pseudomonas putida strain DOT-T1E putative regula...
40
5.7
61 gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, co...
40
5.7
62 dbj|AK091008.1| Homo sapiens cDNA FLJ33689 fis, clone BRAWH2002911
40
5.7
63 dbj|AK057047.1| Homo sapiens cDNA FLJ32485 fis, clone SKNMC20015...
40
5.7
64 gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosom...
40
5.7
65 gb|AC023302.9| Homo sapiens chromosome 15, clone RP11-28H5, comp...
40
5.7
66 gb|CP000249.1| Frankia sp. CcI3, complete genome
40
5.7
67 gb|DQ184476.1| Orf virus strain NZ2, complete genome
40
5.7
68 dbj|AK043266.1| Mus musculus 7 days neonate cerebellum cDNA, RIK...
40
5.7
69 dbj|AK009293.1| Mus musculus adult male tongue cDNA, RIKEN full-...
40
5.7
70 gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK...
40
5.7
71 dbj|AK027953.1| Mus musculus 18-day embryo whole body cDNA, RIKE...
40
5.7
72 tpg|BK000630.1| TPA: TPA_exp: Mus musculus otopetrin 3 (Otop3) m...
40
5.7
73 tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) g...
40
5.7
74 gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Canc...
40
5.7
75 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
40
5.7
76 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
40
5.7
77 ref|NM_027132.1| Mus musculus otopetrin 3 (Otop3), mRNA
40
5.7
78 gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome...
40
5.7
79 emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chro...
40
5.7
80 dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic D...
40
5.7
81 dbj|AK025483.1| Homo sapiens cDNA: FLJ21830 fis, clone HEP01485,...
40
5.7
82 gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, com...
40
5.7
83 gb|AF061937.1|AF061937 Pseudomonas putida efflux pump regulator ...
40
5.7
84 gb|AF063586.1|AF063586 Homo sapiens glial derived neurotrophic f...
40
5.7
85 dbj|AB087505.1| Mus musculus mRNA for hypothetical protein conta...
40
5.7
86 dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hyp...
40
5.7
87 emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chr...
40
5.7
88 emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chr...
40
5.7
89 emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on ch...
40
5.7
90 gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosom...
40
5.7
91 emb|AL512802.2|CNS07EFG Human chromosome 14 DNA sequence BAC C-2...
40
5.7
92 dbj|AB037360.1| Homo sapiens mRNA for ANKHZN, complete cds
40
5.7
93 dbj|AB033081.2| Homo sapiens mRNA for KIAA1255 protein, partial cds
40
5.7
>ref| NM_194214.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 909
Score = 89.7 bits (45), Expect = 7e-15
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 56 cggcgggatcttggccgccgtcgtgtgcgcgctgctggtctttgccatctttcccctcct 115
|||||| || |||| |||||| |||||| |||||||||||| |||||||| ||||||||
Sbjct: 12 cggcggcatgttgggcgccgtggtgtgcttgctgctggtcttcgccatcttccccctcct 71
Query: 116 cctatggcgccgccgttccgatgcc 140
||| ||||||||||| |||||||||
Sbjct: 72 cctctggcgccgccgctccgatgcc 96
Score = 46.1 bits (23), Expect = 0.093
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 158 ccaccgcctcccgccccagccactccagggggaacgggtgcttcgtggcgg 208
|||||||||||| |||||||| ||||||| ||||| ||||| || |||||
Sbjct: 99 ccaccgcctcccaccccagccgctccaggacgaacgtgtgctccgcggcgg 149
>dbj| AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
complete sequence
Length = 29644043
Score = 89.7 bits (45), Expect = 7e-15
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 56 cggcgggatcttggccgccgtcgtgtgcgcgctgctggtctttgccatctttcccctcct 115
|||||| || |||| |||||| |||||| |||||||||||| |||||||| ||||||||
Sbjct: 198767 cggcggcatgttgggcgccgtggtgtgcttgctgctggtcttcgccatcttccccctcct 198708
Query: 116 cctatggcgccgccgttccgatgcc 140
||| ||||||||||| |||||||||
Sbjct: 198707 cctctggcgccgccgctccgatgcc 198683
Score = 42.1 bits (21), Expect = 1.5
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 158 ccaccgcctcccgccccagccactccagg 186
|||||||||||| |||||||| |||||||
Sbjct: 198680 ccaccgcctcccaccccagccgctccagg 198652
>dbj| AP005187.5 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0446F04
Length = 175390
Score = 89.7 bits (45), Expect = 7e-15
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 56 cggcgggatcttggccgccgtcgtgtgcgcgctgctggtctttgccatctttcccctcct 115
|||||| || |||| |||||| |||||| |||||||||||| |||||||| ||||||||
Sbjct: 33631 cggcggcatgttgggcgccgtggtgtgcttgctgctggtcttcgccatcttccccctcct 33572
Query: 116 cctatggcgccgccgttccgatgcc 140
||| ||||||||||| |||||||||
Sbjct: 33571 cctctggcgccgccgctccgatgcc 33547
Score = 42.1 bits (21), Expect = 1.5
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 158 ccaccgcctcccgccccagccactccagg 186
|||||||||||| |||||||| |||||||
Sbjct: 33544 ccaccgcctcccaccccagccgctccagg 33516
>gb| BT017018.1 | Zea mays clone EK07D2312B04.c mRNA sequence
Length = 1095
Score = 87.7 bits (44), Expect = 3e-14
Identities = 97/114 (85%), Gaps = 3/114 (2%)
Strand = Plus / Plus
Query: 86 gctgctggtctttgccatctttcccctcctcctatggcgccgccgttccgatgccaccgg 145
|||| ||||||| |||||||| ||||||||||| ||||||||||| ||||||||| ||
Sbjct: 25 gctggtggtcttcgccatcttccccctcctcctctggcgccgccgctccgatgccgccac 84
Query: 146 cgcgggcgacaaccaccgcctcccgccccagccactccagggggaacgggtgct 199
||| ||| ||||||||| ||||||||||||| ||||||| ||| | ||||||
Sbjct: 85 cgc---cgataaccaccgcgtcccgccccagcccctccaggaggatcaggtgct 135
>gb| CP000353.1 | Ralstonia metallidurans CH34 megaplasmid, complete sequence
Length = 2580084
Score = 44.1 bits (22), Expect = 0.37
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 134 cgatgccaccggcgcgggcgac 155
||||||||||||||||||||||
Sbjct: 1266279 cgatgccaccggcgcgggcgac 1266258
>gb| AC117550.8 | Mus musculus chromosome 1, clone RP24-571N3, complete sequence
Length = 156349
Score = 44.1 bits (22), Expect = 0.37
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 338 gaaggagaggaagaggcaagagaggg 363
|||||||||||||||| |||||||||
Sbjct: 74800 gaaggagaggaagaggaaagagaggg 74825
>emb| AL731552.11 | Mouse DNA sequence from clone RP23-113K24 on chromosome 2, complete
sequence
Length = 203304
Score = 44.1 bits (22), Expect = 0.37
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 354 caagagagggaagagcgggaggcaca 379
|||||||||| |||||||||||||||
Sbjct: 16951 caagagaggggagagcgggaggcaca 16976
>emb| AL844495.6 | Mouse DNA sequence from clone RP23-252L9 on chromosome 2, complete
sequence
Length = 174818
Score = 44.1 bits (22), Expect = 0.37
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagagagggaag 366
||||||||||||| ||||||||||| ||||
Sbjct: 95596 agaaggagaggaaaaggcaagagagtgaag 95567
>gb| AY714813.1 | Cercopithecine herpesvirus 2, complete genome
Length = 150715
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 158 ccaccgcctcccgccccagcc 178
|||||||||||||||||||||
Sbjct: 107579 ccaccgcctcccgccccagcc 107559
>gb| CP000031.1 | Silicibacter pomeroyi DSS-3, complete genome
Length = 4109442
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 135 gatgccaccggcgcgggcgac 155
|||||||||||||||||||||
Sbjct: 3790863 gatgccaccggcgcgggcgac 3790883
>gb| AC115026.16 | Mus musculus chromosome 1, clone RP24-238A19, complete sequence
Length = 191726
Score = 42.1 bits (21), Expect = 1.5
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 349 agaggcaagagagggaagagcggga 373
|||||||||||||||||||| ||||
Sbjct: 53388 agaggcaagagagggaagagaggga 53412
>gb| AC114629.12 | Mus musculus chromosome 1, clone RP24-111F20, complete sequence
Length = 178437
Score = 42.1 bits (21), Expect = 1.5
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 349 agaggcaagagagggaagagcggga 373
|||||||||||||||||||| ||||
Sbjct: 158727 agaggcaagagagggaagagaggga 158751
>gb| BC044833.1 | Mus musculus RAB11 family interacting protein 5 (class I), mRNA
(cDNA clone IMAGE:5356365), partial cds
Length = 3666
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 644 agagggaagagcgggaggcac 624
>gb| BC051063.1 | Mus musculus RAB11 family interacting protein 5 (class I), mRNA
(cDNA clone IMAGE:5356365), partial cds
Length = 3666
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 644 agagggaagagcgggaggcac 624
>ref| NM_177466.4 | Mus musculus RAB11 family interacting protein 5 (class I)
(Rab11fip5), transcript variant 2, mRNA
Length = 4137
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 1115 agagggaagagcgggaggcac 1095
>ref| NM_001003955.2 | Mus musculus RAB11 family interacting protein 5 (class I)
(Rab11fip5), transcript variant 1, mRNA
Length = 6156
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 1115 agagggaagagcgggaggcac 1095
>gb| AC162869.3 | Mus musculus chromosome 1, clone RP24-309N24, complete sequence
Length = 169330
Score = 42.1 bits (21), Expect = 1.5
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagagagggaa 365
||||||||||||||||| | |||||||||
Sbjct: 53143 agaaggagaggaagagggaggagagggaa 53115
>gb| AC155728.13 | Mus musculus 6 BAC RP24-162H1 (Roswell Park Cancer Institute (C57BL/6J
Male) Mouse BAC Library) complete sequence
Length = 176377
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 41978 agagggaagagcgggaggcac 41998
>gb| AC163484.4 | Mus musculus chromosome 1, clone RP23-432C4, complete sequence
Length = 193216
Score = 42.1 bits (21), Expect = 1.5
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 349 agaggcaagagagggaagagcggga 373
|||||||||||||||||||| ||||
Sbjct: 190097 agaggcaagagagggaagagaggga 190073
>ref| XM_992559.1 | PREDICTED: Mus musculus RAB11 family interacting protein 5 (class I)
(Rab11fip5), mRNA
Length = 6019
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 1039 agagggaagagcgggaggcac 1019
>gb| AC116119.12 | Mus musculus chromosome 12, clone RP23-76D19, complete sequence
Length = 264410
Score = 42.1 bits (21), Expect = 1.5
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 338 gaaggagaggaagaggcaagagagggaag 366
|||||||||||||||||||| ||| ||||
Sbjct: 90496 gaaggagaggaagaggcaagggagagaag 90524
>ref| XM_540423.2 | PREDICTED: Canis familiaris similar to otopetrin 3 (LOC483304), mRNA
Length = 1852
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 273 cgtgatgttgcagaggatgag 293
|||||||||||||||||||||
Sbjct: 1681 cgtgatgttgcagaggatgag 1661
>emb| Z70225.1 |HSU165H7 Human DNA sequence from clone LL0XNC01-165H7 on chromosome X, complete
sequence
Length = 38461
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 355 aagagagggaagagcgggagg 375
|||||||||||||||||||||
Sbjct: 20179 aagagagggaagagcgggagg 20159
>emb| CR354750.1 | Mus musculus chromosome 6, clone tr151 strain 129/Sv, complete sequence
Length = 167508
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 30521 agagggaagagcgggaggcac 30541
>gb| AC007550.70 | Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10,
complete sequence
Length = 199956
Score = 42.1 bits (21), Expect = 1.5
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 338 gaaggagaggaagaggcaagagagggaagagcgggag 374
|||||||||||||||| | |||||||| ||| |||||
Sbjct: 154192 gaaggagaggaagagggaggagagggaggagagggag 154156
>dbj| AK145061.1 | Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
full-length enriched library, clone:G830034E24
product:Rab11 interacting protein Rip11 homolog [Mus
musculus], full insert sequence
Length = 2065
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 628 agagggaagagcgggaggcac 608
>dbj| AK154922.1 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
full-length enriched library, clone:F630111H10
product:Rab11 interacting protein Rip11 homolog [Mus
musculus], full insert sequence
Length = 6104
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 1098 agagggaagagcgggaggcac 1078
>gb| AC153579.10 | Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J
Female) Mouse BAC Library) complete sequence
Length = 228481
Score = 42.1 bits (21), Expect = 1.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 331 gctccnagaaggagaggaagaggc 354
||||| ||||||||||||||||||
Sbjct: 85289 gctcccagaaggagaggaagaggc 85266
>dbj| AK129230.1 | Mus musculus mRNA for mKIAA0857 protein
Length = 6119
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 358 agagggaagagcgggaggcac 378
|||||||||||||||||||||
Sbjct: 1115 agagggaagagcgggaggcac 1095
>gb| DQ149153.1 | Cercopithecine herpesvirus 16 strain X313, complete genome
Length = 156487
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 158 ccaccgcctcccgccccagcc 178
|||||||||||||||||||||
Sbjct: 110071 ccaccgcctcccgccccagcc 110051
>gb| AC134236.4 | Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0056G13, complete sequence
Length = 148011
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 345 aggaagaggcaagagagggaagag 368
|||| |||||||||||||||||||
Sbjct: 5695 aggaggaggcaagagagggaagag 5672
>gb| AC152494.1 | Zea mays BAC clone Z418K17, complete sequence
Length = 195448
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 236 gccagctgcggcgagttcgtcggc 259
||||||||||||||||||| ||||
Sbjct: 32490 gccagctgcggcgagttcgccggc 32467
>ref| XM_511280.1 | PREDICTED: Pan troglodytes similar to ankyrin repeat and FYVE domain
containing 1 isoform 1; ankyrin repeat hooked to zinc
finger motif (LOC454443), mRNA
Length = 4010
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 1788 agaaggagaggaagaggctagaga 1811
>ref| XM_466354.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 207
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 344 gaggaagaggcaagagaggg 363
||||||||||||||||||||
Sbjct: 143 gaggaagaggcaagagaggg 162
>gb| AC118010.11 | Mus musculus chromosome 5, clone RP23-451E8, complete sequence
Length = 184672
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 356 agagagggaagagcgggagg 375
||||||||||||||||||||
Sbjct: 154836 agagagggaagagcgggagg 154855
>ref| XM_616692.2 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 1 (LOC536558), mRNA
Length = 2842
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 75 cgtttcgatgccgccggcgcgggcgaca 48
>ref| XM_878478.1 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 9 (LOC536558), mRNA
Length = 3167
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244
>ref| XM_878447.1 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 8 (LOC536558), mRNA
Length = 3158
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244
>ref| XM_866410.1 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 2 (LOC536558), mRNA
Length = 3164
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244
>ref| XM_878367.1 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 7 (LOC536558), mRNA
Length = 3071
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244
>ref| XM_878246.1 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 4 (LOC536558), mRNA
Length = 3248
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 358 cgtttcgatgccgccggcgcgggcgaca 331
>ref| XM_878213.1 | PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
a, transcript variant 3 (LOC536558), mRNA
Length = 892
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
|||| ||||||| |||||||||||||||
Sbjct: 75 cgtttcgatgccgccggcgcgggcgaca 48
>ref| NM_016376.2 | Homo sapiens ankyrin repeat and FYVE domain containing 1 (ANKFY1),
transcript variant 1, mRNA
Length = 7414
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 2298 agaaggagaggaagaggctagaga 2321
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 345 aggaagaggcaagagagggaagag 368
|||| |||||||||||||||||||
Sbjct: 849160 aggaggaggcaagagagggaagag 849137
>gb| AC145198.3 | Mus musculus BAC clone RP23-396H3 from chromosome 16, complete sequence
Length = 201219
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 205 gcggcgctccggcacgccgc 224
||||||||||||||||||||
Sbjct: 95885 gcggcgctccggcacgccgc 95904
>ref| XM_991569.1 | PREDICTED: Mus musculus otopetrin 3 (Otop3), mRNA
Length = 2360
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 1706 gtgatgttgcagaggatgag 1687
>gb| AY386264.1 | Orf virus strain OV-SA00, complete genome
Length = 139962
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 ccgccgtcgtgtgcgcgctgctgg 93
||||||||||| ||||||||||||
Sbjct: 129520 ccgccgtcgtgcgcgcgctgctgg 129543
>gb| AC122911.4 | Mus musculus BAC clone RP23-60K16 from 8, complete sequence
Length = 150400
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagagaggga 364
||||||||||| ||||| ||||||||||
Sbjct: 114807 agaaggagagggagagggaagagaggga 114780
>gb| AC139029.10 | Mus musculus chromosome 14, clone RP23-393A18, complete sequence
Length = 204943
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 163 gcctcccgccccagccactc 182
||||||||||||||||||||
Sbjct: 61096 gcctcccgccccagccactc 61115
>gb| BC060812.1 | Homo sapiens cDNA clone IMAGE:30339773, containing frame-shift errors
Length = 5047
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 2299 agaaggagaggaagaggctagaga 2322
>emb| AL591415.9 | Human DNA sequence from clone RP11-520L11 on chromosome 1, complete
sequence
Length = 110220
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 344 gaggaagaggcaagagagggaaga 367
|||||||||||||||||| |||||
Sbjct: 66473 gaggaagaggcaagagagagaaga 66450
>gb| AC101835.7 | Mus musculus, clone RP23-227D7, complete sequence
Length = 208667
Score = 40.1 bits (20), Expect = 5.7
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagagaggga 364
||||||||||||||||| ||||||||||
Sbjct: 203895 agaaggagaggaagagg-aagagaggga 203869
>emb| AL359455.22 | Human DNA sequence from clone RP11-444K11 on chromosome 9 Contains part
of the RGS3 gene for the regulator of G-protein signalling
3 (C2PA, RGP3, FLJ20370, PDZ-RGS3), complete sequence
Length = 85763
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 345 aggaagaggcaagagaggga 364
||||||||||||||||||||
Sbjct: 81873 aggaagaggcaagagaggga 81892
>emb| AL158075.11 | Human DNA sequence from clone RP11-348K2 on chromosome 9q33.1-34.13
Contains two novel genes and part of the NR6A1 gene for
nuclear receptor (subfamily 6, group A) member 1, complete
sequence
Length = 102867
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 340 aggagaggaagaggcaagagagggaaga 367
||||||||| |||||||||||| |||||
Sbjct: 18807 aggagaggaggaggcaagagagagaaga 18780
>emb| X03020.1 |MMGMCSFG Mouse gene for granulocyte-macrophage colony stimulating factor
(GM-CSF)
Length = 3637
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 167 cccgccccagccactccagg 186
||||||||||||||||||||
Sbjct: 802 cccgccccagccactccagg 821
>emb| CR933717.1 | Homo sapiens mRNA; cDNA DKFZp686M19106 (from clone DKFZp686M19106)
Length = 9358
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 4119 agaaggagaggaagaggctagaga 4142
>gb| AC158917.6 | Mus musculus chromosome 5, clone RP24-238D24, complete sequence
Length = 184805
Score = 40.1 bits (20), Expect = 5.7
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagagaggga 364
||||||||||||||||| ||||||||||
Sbjct: 81077 agaaggagaggaagagg-aagagaggga 81103
>emb| AL596103.22 | Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains the
P4ha2 gene for procollagen-proline 2-oxoglutarate
4-dioxygenase (proline 4-hydroxylase) alpha II polypeptide,
a novel pseudogene, two novel genes, a diazepam binding
inhibitor (Dbi) pseudogene, the Csf2 gene for colony
stimulating factor 2 (granulocyte-macrophage), the Il3 gene
for interleukin 3 and a CpG island, complete sequence
Length = 199500
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 167 cccgccccagccactccagg 186
||||||||||||||||||||
Sbjct: 154396 cccgccccagccactccagg 154377
>gb| AC087742.9 | Homo sapiens chromosome 17, clone RP11-104O19, complete sequence
Length = 168834
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 140035 agaaggagaggaagaggctagaga 140058
>gb| AF299253.2 | Pseudomonas putida strain DOT-T1E putative regulatory protein TtgW
(ttgW), putative regulatory protein TtgV (ttgV),
periplasmic efflux pump component TtgG (ttgG), inner
membrane efflux pump component TtgH (ttgH), and outer
membrane efflux pump component TtgI (ttgI) genes,
complete cds
Length = 9366
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 ggcgacaaccaccgcctccc 169
||||||||||||||||||||
Sbjct: 1811 ggcgacaaccaccgcctccc 1830
>gb| AC087292.14 | Homo sapiens chromosome 17, clone RP11-810M2, complete sequence
Length = 195144
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 166887 agaaggagaggaagaggctagaga 166864
>dbj| AK091008.1 | Homo sapiens cDNA FLJ33689 fis, clone BRAWH2002911
Length = 2555
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 1954 agaaggagaggaagaggctagaga 1931
>dbj| AK057047.1 | Homo sapiens cDNA FLJ32485 fis, clone SKNMC2001596, highly similar to
Homo sapiens mRNA for ANKHZN
Length = 3352
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 2182 agaaggagaggaagaggctagaga 2205
>gb| AC140322.4 | Mus musculus BAC clone RP23-413F14 from chromosome 14, complete
sequence
Length = 205679
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 163 gcctcccgccccagccactc 182
||||||||||||||||||||
Sbjct: 30089 gcctcccgccccagccactc 30070
>gb| AC023302.9 | Homo sapiens chromosome 15, clone RP11-28H5, complete sequence
Length = 151927
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 348 aagaggcaagagagggaaga 367
||||||||||||||||||||
Sbjct: 110285 aagaggcaagagagggaaga 110266
>gb| CP000249.1 | Frankia sp. CcI3, complete genome
Length = 5433628
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 tggacgggtccggcgggatc 65
||||||||||||||||||||
Sbjct: 3693642 tggacgggtccggcgggatc 3693661
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 134 cgatgccaccggcgcgggcg 153
||||||||||||||||||||
Sbjct: 3345751 cgatgccaccggcgcgggcg 3345770
>gb| DQ184476.1 | Orf virus strain NZ2, complete genome
Length = 137820
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 ccgccgtcgtgtgcgcgctgctgg 93
||||||||||| ||||||||||||
Sbjct: 128745 ccgccgtcgtgcgcgcgctgctgg 128768
>dbj| AK043266.1 | Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
enriched library, clone:A730078K24 product:hypothetical
protein, full insert sequence
Length = 2320
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 1667 gtgatgttgcagaggatgag 1648
>dbj| AK009293.1 | Mus musculus adult male tongue cDNA, RIKEN full-length enriched
library, clone:2310011E08 product:RIKEN cDNA 2310011E08
gene, full insert sequence
Length = 859
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 209 gtgatgttgcagaggatgag 190
>gb| AY186732.1 | Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1),
interleukin 10 (IL-10), ankyrin-repeat protein ANK-2
(ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia
virus F10L-like protein (F10L), vaccinia virus F9L-like
protein (F9L), vascular endothelial growth factor-like
protein (VEGF-E), and ORF3 genes, complete cds
Length = 9979
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 ccgccgtcgtgtgcgcgctgctgg 93
||||||||||| ||||||||||||
Sbjct: 2684 ccgccgtcgtgcgcgcgctgctgg 2707
>dbj| AK027953.1 | Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
enriched library, clone:1110033B07 product:hypothetical
protein, full insert sequence
Length = 777
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 205 gcggcgctccggcacgccgc 224
||||||||||||||||||||
Sbjct: 118 gcggcgctccggcacgccgc 137
>tpg| BK000630.1 | TPA: TPA_exp: Mus musculus otopetrin 3 (Otop3) mRNA, complete cds
Length = 2377
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 1724 gtgatgttgcagaggatgag 1705
>tpg| BK000629.1 | TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) gene, complete cds
Length = 53301
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 38799 gtgatgttgcagaggatgag 38780
>gb| AC158682.8 | Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
Female) Mouse BAC Library) complete sequence
Length = 214029
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 341 ggagaggaagaggcaagagaggga 364
||||||||||||| ||||||||||
Sbjct: 55372 ggagaggaagagggaagagaggga 55395
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 345 aggaagaggcaagagagggaagag 368
|||| |||||||||||||||||||
Sbjct: 849158 aggaggaggcaagagagggaagag 849135
>dbj| AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 344 gaggaagaggcaagagaggg 363
||||||||||||||||||||
Sbjct: 21884592 gaggaagaggcaagagaggg 21884573
>ref| NM_027132.1 | Mus musculus otopetrin 3 (Otop3), mRNA
Length = 2377
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 1724 gtgatgttgcagaggatgag 1705
>gb| AC134237.2 | Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10,
complete sequence
Length = 162132
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 345 aggaagaggcaagagagggaagag 368
|||| |||||||||||||||||||
Sbjct: 144705 aggaggaggcaagagagggaagag 144682
>emb| AL928974.12 | Mouse DNA sequence from clone RP23-56C2 on chromosome 2, complete
sequence
Length = 195442
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 340 aggagaggaagaggcaagagaggg 363
||||||||| ||||||||||||||
Sbjct: 43923 aggagaggaggaggcaagagaggg 43946
>dbj| AP005114.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0689H05
Length = 135803
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 344 gaggaagaggcaagagaggg 363
||||||||||||||||||||
Sbjct: 67877 gaggaagaggcaagagaggg 67858
>dbj| AK025483.1 | Homo sapiens cDNA: FLJ21830 fis, clone HEP01485, highly similar to
AB037360 Homo sapiens mRNA for ANKHZN
Length = 3436
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 2298 agaaggagaggaagaggctagaga 2321
>gb| AC002476.1 |AC002476 Human PAC clone RP1-318C15 from Xq23, complete sequence
Length = 147102
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 314 ccccaatgtccccaaaggct 333
||||||||||||||||||||
Sbjct: 111582 ccccaatgtccccaaaggct 111601
>gb| AF061937.1 |AF061937 Pseudomonas putida efflux pump regulator SrpS (srpS) and efflux pump
regulator SrpR (srpR) genes, complete cds
Length = 1566
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 150 ggcgacaaccaccgcctccc 169
||||||||||||||||||||
Sbjct: 1112 ggcgacaaccaccgcctccc 1093
>gb| AF063586.1 |AF063586 Homo sapiens glial derived neurotrophic factor (GDNF) gene, partial
cds
Length = 7892
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 cggcgggatcttggccgccg 75
||||||||||||||||||||
Sbjct: 2372 cggcgggatcttggccgccg 2391
>dbj| AB087505.1 | Mus musculus mRNA for hypothetical protein containing twelve
transmembrane-spanning domain, complete cds
Length = 2343
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 1667 gtgatgttgcagaggatgag 1648
>dbj| AB087501.1 | Mus musculus js genes for Jackson shaker and hypothetical protein,
complete and partial cds
Length = 72195
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 68086 gtgatgttgcagaggatgag 68067
>emb| CT030238.7 | Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete
sequence
Length = 194408
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 343 agaggaagaggcaagagagg 362
||||||||||||||||||||
Sbjct: 47367 agaggaagaggcaagagagg 47348
>emb| AL603828.9 | Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete
sequence
Length = 210982
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 274 gtgatgttgcagaggatgag 293
||||||||||||||||||||
Sbjct: 146021 gtgatgttgcagaggatgag 146002
>emb| CT010569.11 | Mouse DNA sequence from clone RP23-237G24 on chromosome 16, complete
sequence
Length = 238459
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 341 ggagaggaagaggcaagagaggga 364
||||||||||||| ||||||||||
Sbjct: 160640 ggagaggaagagggaagagaggga 160663
>gb| AC154239.3 | Mus musculus BAC clone RP24-164C12 from chromosome 14, complete
sequence
Length = 161815
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 337 agaaggagaggaagaggcaagagagggaagag 368
|||||||||||||| | ||||||||||||||
Sbjct: 80323 agaaggagaggaaggaggaagagagggaagag 80292
>emb| AL512802.2 |CNS07EFG Human chromosome 14 DNA sequence BAC C-2319J18 of library CalTech-D
from chromosome 14 of Homo sapiens (Human), complete
sequence
Length = 97862
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 160 accgcctcccgccccagccactcc 183
||||||||||||||||||| ||||
Sbjct: 55265 accgcctcccgccccagcccctcc 55288
>dbj| AB037360.1 | Homo sapiens mRNA for ANKHZN, complete cds
Length = 5921
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 2283 agaaggagaggaagaggctagaga 2306
>dbj| AB033081.2 | Homo sapiens mRNA for KIAA1255 protein, partial cds
Length = 6457
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 337 agaaggagaggaagaggcaagaga 360
|||||||||||||||||| |||||
Sbjct: 2526 agaaggagaggaagaggctagaga 2549
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,115,618
Number of Sequences: 3902068
Number of extensions: 3115618
Number of successful extensions: 79886
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 79379
Number of HSP's gapped (non-prelim): 508
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)