ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_194214.1| Oryza sativa (japonica cultivar-group), mRNA 90 7e-15
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
3dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
4gb|BT017018.1| Zea mays clone EK07D2312B04.c mRNA sequence 88 3e-14
5gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 44 0.37
6gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, comp... 44 0.37
7emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on ch... 44 0.37
8emb|AL844495.6| Mouse DNA sequence from clone RP23-252L9 on chro... 44 0.37
9gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 1.5
10gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.5
11gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, co... 42 1.5
12gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, co... 42 1.5
13gb|BC044833.1| Mus musculus RAB11 family interacting protein 5 (... 42 1.5
14gb|BC051063.1| Mus musculus RAB11 family interacting protein 5 (... 42 1.5
15ref|NM_177466.4| Mus musculus RAB11 family interacting protein 5... 42 1.5
16ref|NM_001003955.2| Mus musculus RAB11 family interacting protei... 42 1.5
17gb|AC162869.3| Mus musculus chromosome 1, clone RP24-309N24, com... 42 1.5
18gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Canc... 42 1.5
19gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, comp... 42 1.5
20ref|XM_992559.1| PREDICTED: Mus musculus RAB11 family interactin... 42 1.5
21gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, co... 42 1.5
22ref|XM_540423.2| PREDICTED: Canis familiaris similar to otopetri... 42 1.5
23emb|Z70225.1|HSU165H7 Human DNA sequence from clone LL0XNC01-165... 42 1.5
24emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 12... 42 1.5
25gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a... 42 1.5
26dbj|AK145061.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 42 1.5
27dbj|AK154922.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.5
28gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cance... 42 1.5
29dbj|AK129230.1| Mus musculus mRNA for mKIAA0857 protein 42 1.5
30gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 42 1.5
31gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
32gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence 40 5.7
33ref|XM_511280.1| PREDICTED: Pan troglodytes similar to ankyrin r... 40 5.7
34ref|XM_466354.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
35gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, com... 40 5.7
36ref|XM_616692.2| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
37ref|XM_878478.1| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
38ref|XM_878447.1| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
39ref|XM_866410.1| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
40ref|XM_878367.1| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
41ref|XM_878246.1| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
42ref|XM_878213.1| PREDICTED: Bos taurus similar to heat shock 70k... 40 5.7
43ref|NM_016376.2| Homo sapiens ankyrin repeat and FYVE domain con... 40 5.7
44gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.7
45gb|AC145198.3| Mus musculus BAC clone RP23-396H3 from chromosome... 40 5.7
46ref|XM_991569.1| PREDICTED: Mus musculus otopetrin 3 (Otop3), mRNA 40 5.7
47gb|AY386264.1| Orf virus strain OV-SA00, complete genome 40 5.7
48gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complet... 40 5.7
49gb|AC139029.10| Mus musculus chromosome 14, clone RP23-393A18, c... 40 5.7
50gb|BC060812.1| Homo sapiens cDNA clone IMAGE:30339773, containin... 40 5.7
51emb|AL591415.9| Human DNA sequence from clone RP11-520L11 on chr... 40 5.7
52gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence 40 5.7
53emb|AL359455.22| Human DNA sequence from clone RP11-444K11 on ch... 40 5.7
54emb|AL158075.11| Human DNA sequence from clone RP11-348K2 on chr... 40 5.7
55emb|X03020.1|MMGMCSFG Mouse gene for granulocyte-macrophage colo... 40 5.7
56emb|CR933717.1| Homo sapiens mRNA; cDNA DKFZp686M19106 (from clo... 40 5.7
57gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, com... 40 5.7
58emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on ch... 40 5.7
59gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, co... 40 5.7
60gb|AF299253.2| Pseudomonas putida strain DOT-T1E putative regula... 40 5.7
61gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, co... 40 5.7
62dbj|AK091008.1| Homo sapiens cDNA FLJ33689 fis, clone BRAWH2002911 40 5.7
63dbj|AK057047.1| Homo sapiens cDNA FLJ32485 fis, clone SKNMC20015... 40 5.7
64gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosom... 40 5.7
65gb|AC023302.9| Homo sapiens chromosome 15, clone RP11-28H5, comp... 40 5.7
66gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.7
67gb|DQ184476.1| Orf virus strain NZ2, complete genome 40 5.7
68dbj|AK043266.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 5.7
69dbj|AK009293.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 5.7
70gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK... 40 5.7
71dbj|AK027953.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 5.7
72tpg|BK000630.1| TPA: TPA_exp: Mus musculus otopetrin 3 (Otop3) m... 40 5.7
73tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) g... 40 5.7
74gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Canc... 40 5.7
75dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
76dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
77ref|NM_027132.1| Mus musculus otopetrin 3 (Otop3), mRNA 40 5.7
78gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
79emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chro... 40 5.7
80dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
81dbj|AK025483.1| Homo sapiens cDNA: FLJ21830 fis, clone HEP01485,... 40 5.7
82gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, com... 40 5.7
83gb|AF061937.1|AF061937 Pseudomonas putida efflux pump regulator ... 40 5.7
84gb|AF063586.1|AF063586 Homo sapiens glial derived neurotrophic f... 40 5.7
85dbj|AB087505.1| Mus musculus mRNA for hypothetical protein conta... 40 5.7
86dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hyp... 40 5.7
87emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chr... 40 5.7
88emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chr... 40 5.7
89emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on ch... 40 5.7
90gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosom... 40 5.7
91emb|AL512802.2|CNS07EFG Human chromosome 14 DNA sequence BAC C-2... 40 5.7
92dbj|AB037360.1| Homo sapiens mRNA for ANKHZN, complete cds 40 5.7
93dbj|AB033081.2| Homo sapiens mRNA for KIAA1255 protein, partial cds 40 5.7

>ref|NM_194214.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 75/85 (88%)
 Strand = Plus / Plus

                                                                       
Query: 56  cggcgggatcttggccgccgtcgtgtgcgcgctgctggtctttgccatctttcccctcct 115
           |||||| || |||| |||||| ||||||  |||||||||||| |||||||| ||||||||
Sbjct: 12  cggcggcatgttgggcgccgtggtgtgcttgctgctggtcttcgccatcttccccctcct 71

                                    
Query: 116 cctatggcgccgccgttccgatgcc 140
           ||| ||||||||||| |||||||||
Sbjct: 72  cctctggcgccgccgctccgatgcc 96



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 158 ccaccgcctcccgccccagccactccagggggaacgggtgcttcgtggcgg 208
           |||||||||||| |||||||| |||||||  ||||| ||||| || |||||
Sbjct: 99  ccaccgcctcccaccccagccgctccaggacgaacgtgtgctccgcggcgg 149



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                          
Query: 56     cggcgggatcttggccgccgtcgtgtgcgcgctgctggtctttgccatctttcccctcct 115
              |||||| || |||| |||||| ||||||  |||||||||||| |||||||| ||||||||
Sbjct: 198767 cggcggcatgttgggcgccgtggtgtgcttgctgctggtcttcgccatcttccccctcct 198708

                                       
Query: 116    cctatggcgccgccgttccgatgcc 140
              ||| ||||||||||| |||||||||
Sbjct: 198707 cctctggcgccgccgctccgatgcc 198683



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 158    ccaccgcctcccgccccagccactccagg 186
              |||||||||||| |||||||| |||||||
Sbjct: 198680 ccaccgcctcccaccccagccgctccagg 198652



to top

>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                         
Query: 56    cggcgggatcttggccgccgtcgtgtgcgcgctgctggtctttgccatctttcccctcct 115
             |||||| || |||| |||||| ||||||  |||||||||||| |||||||| ||||||||
Sbjct: 33631 cggcggcatgttgggcgccgtggtgtgcttgctgctggtcttcgccatcttccccctcct 33572

                                      
Query: 116   cctatggcgccgccgttccgatgcc 140
             ||| ||||||||||| |||||||||
Sbjct: 33571 cctctggcgccgccgctccgatgcc 33547



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 158   ccaccgcctcccgccccagccactccagg 186
             |||||||||||| |||||||| |||||||
Sbjct: 33544 ccaccgcctcccaccccagccgctccagg 33516



to top

>gb|BT017018.1| Zea mays clone EK07D2312B04.c mRNA sequence
          Length = 1095

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 97/114 (85%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                       
Query: 86  gctgctggtctttgccatctttcccctcctcctatggcgccgccgttccgatgccaccgg 145
           |||| ||||||| |||||||| ||||||||||| ||||||||||| ||||||||| ||  
Sbjct: 25  gctggtggtcttcgccatcttccccctcctcctctggcgccgccgctccgatgccgccac 84

                                                                 
Query: 146 cgcgggcgacaaccaccgcctcccgccccagccactccagggggaacgggtgct 199
           |||   ||| ||||||||| ||||||||||||| ||||||| ||| | ||||||
Sbjct: 85  cgc---cgataaccaccgcgtcccgccccagcccctccaggaggatcaggtgct 135



to top

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 134     cgatgccaccggcgcgggcgac 155
               ||||||||||||||||||||||
Sbjct: 1266279 cgatgccaccggcgcgggcgac 1266258



to top

>gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, complete sequence
          Length = 156349

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 338   gaaggagaggaagaggcaagagaggg 363
             |||||||||||||||| |||||||||
Sbjct: 74800 gaaggagaggaagaggaaagagaggg 74825



to top

>emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on chromosome 2, complete
             sequence
          Length = 203304

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 354   caagagagggaagagcgggaggcaca 379
             |||||||||| |||||||||||||||
Sbjct: 16951 caagagaggggagagcgggaggcaca 16976



to top

>emb|AL844495.6| Mouse DNA sequence from clone RP23-252L9 on chromosome 2, complete
             sequence
          Length = 174818

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 337   agaaggagaggaagaggcaagagagggaag 366
             ||||||||||||| ||||||||||| ||||
Sbjct: 95596 agaaggagaggaaaaggcaagagagtgaag 95567



to top

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    ccaccgcctcccgccccagcc 178
              |||||||||||||||||||||
Sbjct: 107579 ccaccgcctcccgccccagcc 107559



to top

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 135     gatgccaccggcgcgggcgac 155
               |||||||||||||||||||||
Sbjct: 3790863 gatgccaccggcgcgggcgac 3790883



to top

>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 349   agaggcaagagagggaagagcggga 373
             |||||||||||||||||||| ||||
Sbjct: 53388 agaggcaagagagggaagagaggga 53412



to top

>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence
          Length = 178437

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 349    agaggcaagagagggaagagcggga 373
              |||||||||||||||||||| ||||
Sbjct: 158727 agaggcaagagagggaagagaggga 158751



to top

>gb|BC044833.1| Mus musculus RAB11 family interacting protein 5 (class I), mRNA
           (cDNA clone IMAGE:5356365), partial cds
          Length = 3666

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 358 agagggaagagcgggaggcac 378
           |||||||||||||||||||||
Sbjct: 644 agagggaagagcgggaggcac 624



to top

>gb|BC051063.1| Mus musculus RAB11 family interacting protein 5 (class I), mRNA
           (cDNA clone IMAGE:5356365), partial cds
          Length = 3666

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 358 agagggaagagcgggaggcac 378
           |||||||||||||||||||||
Sbjct: 644 agagggaagagcgggaggcac 624



to top

>ref|NM_177466.4| Mus musculus RAB11 family interacting protein 5 (class I)
            (Rab11fip5), transcript variant 2, mRNA
          Length = 4137

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 358  agagggaagagcgggaggcac 378
            |||||||||||||||||||||
Sbjct: 1115 agagggaagagcgggaggcac 1095



to top

>ref|NM_001003955.2| Mus musculus RAB11 family interacting protein 5 (class I)
            (Rab11fip5), transcript variant 1, mRNA
          Length = 6156

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 358  agagggaagagcgggaggcac 378
            |||||||||||||||||||||
Sbjct: 1115 agagggaagagcgggaggcac 1095



to top

>gb|AC162869.3| Mus musculus chromosome 1, clone RP24-309N24, complete sequence
          Length = 169330

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 337   agaaggagaggaagaggcaagagagggaa 365
             ||||||||||||||||| | |||||||||
Sbjct: 53143 agaaggagaggaagagggaggagagggaa 53115



to top

>gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 176377

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   agagggaagagcgggaggcac 378
             |||||||||||||||||||||
Sbjct: 41978 agagggaagagcgggaggcac 41998



to top

>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence
          Length = 193216

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 349    agaggcaagagagggaagagcggga 373
              |||||||||||||||||||| ||||
Sbjct: 190097 agaggcaagagagggaagagaggga 190073



to top

>ref|XM_992559.1| PREDICTED: Mus musculus RAB11 family interacting protein 5 (class I)
            (Rab11fip5), mRNA
          Length = 6019

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 358  agagggaagagcgggaggcac 378
            |||||||||||||||||||||
Sbjct: 1039 agagggaagagcgggaggcac 1019



to top

>gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, complete sequence
          Length = 264410

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 338   gaaggagaggaagaggcaagagagggaag 366
             |||||||||||||||||||| ||| ||||
Sbjct: 90496 gaaggagaggaagaggcaagggagagaag 90524



to top

>ref|XM_540423.2| PREDICTED: Canis familiaris similar to otopetrin 3 (LOC483304), mRNA
          Length = 1852

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 273  cgtgatgttgcagaggatgag 293
            |||||||||||||||||||||
Sbjct: 1681 cgtgatgttgcagaggatgag 1661



to top

>emb|Z70225.1|HSU165H7 Human DNA sequence from clone LL0XNC01-165H7 on chromosome X, complete
             sequence
          Length = 38461

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   aagagagggaagagcgggagg 375
             |||||||||||||||||||||
Sbjct: 20179 aagagagggaagagcgggagg 20159



to top

>emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 129/Sv, complete sequence
          Length = 167508

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   agagggaagagcgggaggcac 378
             |||||||||||||||||||||
Sbjct: 30521 agagggaagagcgggaggcac 30541



to top

>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10,
              complete sequence
          Length = 199956

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 338    gaaggagaggaagaggcaagagagggaagagcgggag 374
              |||||||||||||||| | |||||||| ||| |||||
Sbjct: 154192 gaaggagaggaagagggaggagagggaggagagggag 154156



to top

>dbj|AK145061.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
           full-length enriched library, clone:G830034E24
           product:Rab11 interacting protein Rip11 homolog [Mus
           musculus], full insert sequence
          Length = 2065

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 358 agagggaagagcgggaggcac 378
           |||||||||||||||||||||
Sbjct: 628 agagggaagagcgggaggcac 608



to top

>dbj|AK154922.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630111H10
            product:Rab11 interacting protein Rip11 homolog [Mus
            musculus], full insert sequence
          Length = 6104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 358  agagggaagagcgggaggcac 378
            |||||||||||||||||||||
Sbjct: 1098 agagggaagagcgggaggcac 1078



to top

>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 228481

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 331   gctccnagaaggagaggaagaggc 354
             ||||| ||||||||||||||||||
Sbjct: 85289 gctcccagaaggagaggaagaggc 85266



to top

>dbj|AK129230.1| Mus musculus mRNA for mKIAA0857 protein
          Length = 6119

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 358  agagggaagagcgggaggcac 378
            |||||||||||||||||||||
Sbjct: 1115 agagggaagagcgggaggcac 1095



to top

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    ccaccgcctcccgccccagcc 178
              |||||||||||||||||||||
Sbjct: 110071 ccaccgcctcccgccccagcc 110051



to top

>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0056G13, complete sequence
          Length = 148011

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  aggaagaggcaagagagggaagag 368
            |||| |||||||||||||||||||
Sbjct: 5695 aggaggaggcaagagagggaagag 5672



to top

>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence
          Length = 195448

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   gccagctgcggcgagttcgtcggc 259
             ||||||||||||||||||| ||||
Sbjct: 32490 gccagctgcggcgagttcgccggc 32467



to top

>ref|XM_511280.1| PREDICTED: Pan troglodytes similar to ankyrin repeat and FYVE domain
            containing 1 isoform 1; ankyrin repeat hooked to zinc
            finger motif (LOC454443), mRNA
          Length = 4010

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 1788 agaaggagaggaagaggctagaga 1811



to top

>ref|XM_466354.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 207

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gaggaagaggcaagagaggg 363
           ||||||||||||||||||||
Sbjct: 143 gaggaagaggcaagagaggg 162



to top

>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence
          Length = 184672

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    agagagggaagagcgggagg 375
              ||||||||||||||||||||
Sbjct: 154836 agagagggaagagcgggagg 154855



to top

>ref|XM_616692.2| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 1 (LOC536558), mRNA
          Length = 2842

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 75  cgtttcgatgccgccggcgcgggcgaca 48



to top

>ref|XM_878478.1| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 9 (LOC536558), mRNA
          Length = 3167

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244



to top

>ref|XM_878447.1| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 8 (LOC536558), mRNA
          Length = 3158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244



to top

>ref|XM_866410.1| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 2 (LOC536558), mRNA
          Length = 3164

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244



to top

>ref|XM_878367.1| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 7 (LOC536558), mRNA
          Length = 3071

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 271 cgtttcgatgccgccggcgcgggcgaca 244



to top

>ref|XM_878246.1| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 4 (LOC536558), mRNA
          Length = 3248

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 358 cgtttcgatgccgccggcgcgggcgaca 331



to top

>ref|XM_878213.1| PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform
           a, transcript variant 3 (LOC536558), mRNA
          Length = 892

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 129 cgttccgatgccaccggcgcgggcgaca 156
           |||| ||||||| |||||||||||||||
Sbjct: 75  cgtttcgatgccgccggcgcgggcgaca 48



to top

>ref|NM_016376.2| Homo sapiens ankyrin repeat and FYVE domain containing 1 (ANKFY1),
            transcript variant 1, mRNA
          Length = 7414

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 2298 agaaggagaggaagaggctagaga 2321



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    aggaagaggcaagagagggaagag 368
              |||| |||||||||||||||||||
Sbjct: 849160 aggaggaggcaagagagggaagag 849137



to top

>gb|AC145198.3| Mus musculus BAC clone RP23-396H3 from chromosome 16, complete sequence
          Length = 201219

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   gcggcgctccggcacgccgc 224
             ||||||||||||||||||||
Sbjct: 95885 gcggcgctccggcacgccgc 95904



to top

>ref|XM_991569.1| PREDICTED: Mus musculus otopetrin 3 (Otop3), mRNA
          Length = 2360

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  gtgatgttgcagaggatgag 293
            ||||||||||||||||||||
Sbjct: 1706 gtgatgttgcagaggatgag 1687



to top

>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     ccgccgtcgtgtgcgcgctgctgg 93
              ||||||||||| ||||||||||||
Sbjct: 129520 ccgccgtcgtgcgcgcgctgctgg 129543



to top

>gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complete sequence
          Length = 150400

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 337    agaaggagaggaagaggcaagagaggga 364
              ||||||||||| ||||| ||||||||||
Sbjct: 114807 agaaggagagggagagggaagagaggga 114780



to top

>gb|AC139029.10| Mus musculus chromosome 14, clone RP23-393A18, complete sequence
          Length = 204943

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gcctcccgccccagccactc 182
             ||||||||||||||||||||
Sbjct: 61096 gcctcccgccccagccactc 61115



to top

>gb|BC060812.1| Homo sapiens cDNA clone IMAGE:30339773, containing frame-shift errors
          Length = 5047

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 2299 agaaggagaggaagaggctagaga 2322



to top

>emb|AL591415.9| Human DNA sequence from clone RP11-520L11 on chromosome 1, complete
             sequence
          Length = 110220

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   gaggaagaggcaagagagggaaga 367
             |||||||||||||||||| |||||
Sbjct: 66473 gaggaagaggcaagagagagaaga 66450



to top

>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence
          Length = 208667

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 337    agaaggagaggaagaggcaagagaggga 364
              ||||||||||||||||| ||||||||||
Sbjct: 203895 agaaggagaggaagagg-aagagaggga 203869



to top

>emb|AL359455.22| Human DNA sequence from clone RP11-444K11 on chromosome 9 Contains part
             of the RGS3 gene for the regulator of G-protein signalling
             3 (C2PA, RGP3, FLJ20370, PDZ-RGS3), complete sequence
          Length = 85763

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   aggaagaggcaagagaggga 364
             ||||||||||||||||||||
Sbjct: 81873 aggaagaggcaagagaggga 81892



to top

>emb|AL158075.11| Human DNA sequence from clone RP11-348K2 on chromosome 9q33.1-34.13
             Contains two novel genes and part of the NR6A1 gene for
             nuclear receptor (subfamily 6, group A) member 1, complete
             sequence
          Length = 102867

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 340   aggagaggaagaggcaagagagggaaga 367
             ||||||||| |||||||||||| |||||
Sbjct: 18807 aggagaggaggaggcaagagagagaaga 18780



to top

>emb|X03020.1|MMGMCSFG Mouse gene for granulocyte-macrophage colony stimulating factor
           (GM-CSF)
          Length = 3637

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 cccgccccagccactccagg 186
           ||||||||||||||||||||
Sbjct: 802 cccgccccagccactccagg 821



to top

>emb|CR933717.1| Homo sapiens mRNA; cDNA DKFZp686M19106 (from clone DKFZp686M19106)
          Length = 9358

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 4119 agaaggagaggaagaggctagaga 4142



to top

>gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, complete sequence
          Length = 184805

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 337   agaaggagaggaagaggcaagagaggga 364
             ||||||||||||||||| ||||||||||
Sbjct: 81077 agaaggagaggaagagg-aagagaggga 81103



to top

>emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains the
              P4ha2 gene for procollagen-proline 2-oxoglutarate
              4-dioxygenase (proline 4-hydroxylase) alpha II polypeptide,
              a novel pseudogene, two novel genes, a diazepam binding
              inhibitor (Dbi) pseudogene, the Csf2 gene for colony
              stimulating factor 2 (granulocyte-macrophage), the Il3 gene
              for interleukin 3 and a CpG island, complete sequence
          Length = 199500

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    cccgccccagccactccagg 186
              ||||||||||||||||||||
Sbjct: 154396 cccgccccagccactccagg 154377



to top

>gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, complete sequence
          Length = 168834

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 337    agaaggagaggaagaggcaagaga 360
              |||||||||||||||||| |||||
Sbjct: 140035 agaaggagaggaagaggctagaga 140058



to top

>gb|AF299253.2| Pseudomonas putida strain DOT-T1E putative regulatory protein TtgW
            (ttgW), putative regulatory protein TtgV (ttgV),
            periplasmic efflux pump component TtgG (ttgG), inner
            membrane efflux pump component TtgH (ttgH), and outer
            membrane efflux pump component TtgI (ttgI) genes,
            complete cds
          Length = 9366

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  ggcgacaaccaccgcctccc 169
            ||||||||||||||||||||
Sbjct: 1811 ggcgacaaccaccgcctccc 1830



to top

>gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, complete sequence
          Length = 195144

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 337    agaaggagaggaagaggcaagaga 360
              |||||||||||||||||| |||||
Sbjct: 166887 agaaggagaggaagaggctagaga 166864



to top

>dbj|AK091008.1| Homo sapiens cDNA FLJ33689 fis, clone BRAWH2002911
          Length = 2555

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 1954 agaaggagaggaagaggctagaga 1931



to top

>dbj|AK057047.1| Homo sapiens cDNA FLJ32485 fis, clone SKNMC2001596, highly similar to
            Homo sapiens mRNA for ANKHZN
          Length = 3352

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 2182 agaaggagaggaagaggctagaga 2205



to top

>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete
             sequence
          Length = 205679

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   gcctcccgccccagccactc 182
             ||||||||||||||||||||
Sbjct: 30089 gcctcccgccccagccactc 30070



to top

>gb|AC023302.9| Homo sapiens chromosome 15, clone RP11-28H5, complete sequence
          Length = 151927

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    aagaggcaagagagggaaga 367
              ||||||||||||||||||||
Sbjct: 110285 aagaggcaagagagggaaga 110266



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 46      tggacgggtccggcgggatc 65
               ||||||||||||||||||||
Sbjct: 3693642 tggacgggtccggcgggatc 3693661



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     cgatgccaccggcgcgggcg 153
               ||||||||||||||||||||
Sbjct: 3345751 cgatgccaccggcgcgggcg 3345770



to top

>gb|DQ184476.1| Orf virus strain NZ2, complete genome
          Length = 137820

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     ccgccgtcgtgtgcgcgctgctgg 93
              ||||||||||| ||||||||||||
Sbjct: 128745 ccgccgtcgtgcgcgcgctgctgg 128768



to top

>dbj|AK043266.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730078K24 product:hypothetical
            protein, full insert sequence
          Length = 2320

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  gtgatgttgcagaggatgag 293
            ||||||||||||||||||||
Sbjct: 1667 gtgatgttgcagaggatgag 1648



to top

>dbj|AK009293.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310011E08 product:RIKEN cDNA 2310011E08
           gene, full insert sequence
          Length = 859

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 gtgatgttgcagaggatgag 293
           ||||||||||||||||||||
Sbjct: 209 gtgatgttgcagaggatgag 190



to top

>gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1),
            interleukin 10 (IL-10), ankyrin-repeat protein ANK-2
            (ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia
            virus F10L-like protein (F10L), vaccinia virus F9L-like
            protein (F9L), vascular endothelial growth factor-like
            protein (VEGF-E), and ORF3 genes, complete cds
          Length = 9979

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 70   ccgccgtcgtgtgcgcgctgctgg 93
            ||||||||||| ||||||||||||
Sbjct: 2684 ccgccgtcgtgcgcgcgctgctgg 2707



to top

>dbj|AK027953.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110033B07 product:hypothetical
           protein, full insert sequence
          Length = 777

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 205 gcggcgctccggcacgccgc 224
           ||||||||||||||||||||
Sbjct: 118 gcggcgctccggcacgccgc 137



to top

>tpg|BK000630.1| TPA: TPA_exp: Mus musculus otopetrin 3 (Otop3) mRNA, complete cds
          Length = 2377

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  gtgatgttgcagaggatgag 293
            ||||||||||||||||||||
Sbjct: 1724 gtgatgttgcagaggatgag 1705



to top

>tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) gene, complete cds
          Length = 53301

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gtgatgttgcagaggatgag 293
             ||||||||||||||||||||
Sbjct: 38799 gtgatgttgcagaggatgag 38780



to top

>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214029

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 341   ggagaggaagaggcaagagaggga 364
             ||||||||||||| ||||||||||
Sbjct: 55372 ggagaggaagagggaagagaggga 55395



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    aggaagaggcaagagagggaagag 368
              |||| |||||||||||||||||||
Sbjct: 849158 aggaggaggcaagagagggaagag 849135



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 344      gaggaagaggcaagagaggg 363
                ||||||||||||||||||||
Sbjct: 21884592 gaggaagaggcaagagaggg 21884573



to top

>ref|NM_027132.1| Mus musculus otopetrin 3 (Otop3), mRNA
          Length = 2377

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  gtgatgttgcagaggatgag 293
            ||||||||||||||||||||
Sbjct: 1724 gtgatgttgcagaggatgag 1705



to top

>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10,
              complete sequence
          Length = 162132

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    aggaagaggcaagagagggaagag 368
              |||| |||||||||||||||||||
Sbjct: 144705 aggaggaggcaagagagggaagag 144682



to top

>emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chromosome 2, complete
             sequence
          Length = 195442

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   aggagaggaagaggcaagagaggg 363
             ||||||||| ||||||||||||||
Sbjct: 43923 aggagaggaggaggcaagagaggg 43946



to top

>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689H05
          Length = 135803

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gaggaagaggcaagagaggg 363
             ||||||||||||||||||||
Sbjct: 67877 gaggaagaggcaagagaggg 67858



to top

>dbj|AK025483.1| Homo sapiens cDNA: FLJ21830 fis, clone HEP01485, highly similar to
            AB037360 Homo sapiens mRNA for ANKHZN
          Length = 3436

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 2298 agaaggagaggaagaggctagaga 2321



to top

>gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, complete sequence
          Length = 147102

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    ccccaatgtccccaaaggct 333
              ||||||||||||||||||||
Sbjct: 111582 ccccaatgtccccaaaggct 111601



to top

>gb|AF061937.1|AF061937 Pseudomonas putida efflux pump regulator SrpS (srpS) and efflux pump
            regulator SrpR (srpR) genes, complete cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ggcgacaaccaccgcctccc 169
            ||||||||||||||||||||
Sbjct: 1112 ggcgacaaccaccgcctccc 1093



to top

>gb|AF063586.1|AF063586 Homo sapiens glial derived neurotrophic factor (GDNF) gene, partial
            cds
          Length = 7892

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   cggcgggatcttggccgccg 75
            ||||||||||||||||||||
Sbjct: 2372 cggcgggatcttggccgccg 2391



to top

>dbj|AB087505.1| Mus musculus mRNA for hypothetical protein containing twelve
            transmembrane-spanning domain, complete cds
          Length = 2343

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  gtgatgttgcagaggatgag 293
            ||||||||||||||||||||
Sbjct: 1667 gtgatgttgcagaggatgag 1648



to top

>dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hypothetical protein,
             complete and partial cds
          Length = 72195

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gtgatgttgcagaggatgag 293
             ||||||||||||||||||||
Sbjct: 68086 gtgatgttgcagaggatgag 68067



to top

>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete
             sequence
          Length = 194408

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   agaggaagaggcaagagagg 362
             ||||||||||||||||||||
Sbjct: 47367 agaggaagaggcaagagagg 47348



to top

>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete
              sequence
          Length = 210982

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    gtgatgttgcagaggatgag 293
              ||||||||||||||||||||
Sbjct: 146021 gtgatgttgcagaggatgag 146002



to top

>emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on chromosome 16, complete
              sequence
          Length = 238459

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 341    ggagaggaagaggcaagagaggga 364
              ||||||||||||| ||||||||||
Sbjct: 160640 ggagaggaagagggaagagaggga 160663



to top

>gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosome 14, complete
             sequence
          Length = 161815

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 337   agaaggagaggaagaggcaagagagggaagag 368
             ||||||||||||||  | ||||||||||||||
Sbjct: 80323 agaaggagaggaaggaggaagagagggaagag 80292



to top

>emb|AL512802.2|CNS07EFG Human chromosome 14 DNA sequence BAC C-2319J18 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 97862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   accgcctcccgccccagccactcc 183
             ||||||||||||||||||| ||||
Sbjct: 55265 accgcctcccgccccagcccctcc 55288



to top

>dbj|AB037360.1| Homo sapiens mRNA for ANKHZN, complete cds
          Length = 5921

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 2283 agaaggagaggaagaggctagaga 2306



to top

>dbj|AB033081.2| Homo sapiens mRNA for KIAA1255 protein, partial cds
          Length = 6457

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 337  agaaggagaggaagaggcaagaga 360
            |||||||||||||||||| |||||
Sbjct: 2526 agaaggagaggaagaggctagaga 2549


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,115,618
Number of Sequences: 3902068
Number of extensions: 3115618
Number of successful extensions: 79886
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 79379
Number of HSP's gapped (non-prelim): 508
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top