ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59e09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 507 bits (256), Expect = e-141 Identities = 303/319 (94%) Strand = Plus / Plus Query: 113 gcagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggc 172 |||| |||||||||| ||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 206 gcaggcggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggc 265 Query: 173 gtgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcga 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 266 gtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcga 325 Query: 233 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacggctttgtgacgtt 292 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 326 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacggattcgtgacgtt 385 Query: 293 caaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatcaacggccg 352 |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 386 caaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatcaacggccg 445 Query: 353 ccgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccgccgcacct 412 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 446 ccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccgccgcacct 505 Query: 413 cctccgcccctcgccgccg 431 ||||||||||||||||||| Sbjct: 506 cctccgcccctcgccgccg 524
>gb|BT016733.1| Zea mays clone Contig566 mRNA sequence Length = 1342 Score = 454 bits (229), Expect = e-124 Identities = 296/318 (93%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 114 cagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcg 173 |||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112 cagccgccggcgccgttcggggacaccacgctcaccaaggtgttcgtgggcgggctggcg 171 Query: 174 tgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcgag 233 |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 172 tgggagacccacaaggacgccctccgcgagcacttcgagcgctacggcgacatcctcgag 231 Query: 234 gccgtcatcatctccgacaagctcaccggccgctccaagggctacggctttgtgacgttc 293 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 232 gccgtcatcatctccgacaagctcaccggccgctccaagggctacggcttcgtgacgttc 291 Query: 294 aaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatcaacggccgc 353 ||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||||| Sbjct: 292 aaggaggcggacgcggccaagaaggcgtgcgaggacgccacccccgtcatcaacggccgc 351 Query: 354 cgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccgccgcacctc 413 |||||||||||||||||||| ||||||||||| ||||||| ||| ||||| ||| || Sbjct: 352 cgcgccaactgcaacctcgccgccctcggcgccaagccgcgcccc---ccgccacacatc 408 Query: 414 ctccgcccctcgccgccg 431 |||||||| ||||||||| Sbjct: 409 ctccgcccttcgccgccg 426
>ref|XM_470664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 278 bits (140), Expect = 1e-71 Identities = 161/168 (95%) Strand = Plus / Plus Query: 113 gcagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggc 172 ||||||||||||||| ||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 63 gcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggc 122 Query: 173 gtgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcga 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123 gtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcga 182 Query: 233 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 280 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 230 Score = 246 bits (124), Expect = 5e-62 Identities = 141/147 (95%) Strand = Plus / Plus Query: 285 gtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatc 344 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 322 gtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatc 381 Query: 345 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccg 404 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 382 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccg 441 Query: 405 ccgcacctcctccgcccctcgccgccg 431 ||||||||||||||||||||||||||| Sbjct: 442 ccgcacctcctccgcccctcgccgccg 468
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 278 bits (140), Expect = 1e-71 Identities = 161/168 (95%) Strand = Plus / Minus Query: 113 gcagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggc 172 ||||||||||||||| ||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 9852573 gcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggc 9852514 Query: 173 gtgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcga 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9852513 gtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcga 9852454 Query: 233 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 280 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9852453 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 9852406 Score = 246 bits (124), Expect = 5e-62 Identities = 141/147 (95%) Strand = Plus / Minus Query: 285 gtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatc 344 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 9852314 gtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatc 9852255 Query: 345 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccg 404 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 9852254 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccg 9852195 Query: 405 ccgcacctcctccgcccctcgccgccg 431 ||||||||||||||||||||||||||| Sbjct: 9852194 ccgcacctcctccgcccctcgccgccg 9852168 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 204 cacttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggc 263 |||||||||| |||||||| ||| |||||||||| ||||| ||||||||| ||||||| Sbjct: 7668989 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatcgccgacaagcacaccggc 7668930 Query: 264 cgctccaagggctacggctttgt 286 ||||||||||||||||| ||||| Sbjct: 7668929 cgctccaagggctacggttttgt 7668907
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 278 bits (140), Expect = 1e-71 Identities = 161/168 (95%) Strand = Plus / Minus Query: 113 gcagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggc 172 ||||||||||||||| ||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 9850694 gcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggc 9850635 Query: 173 gtgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcga 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9850634 gtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcga 9850575 Query: 233 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 280 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9850574 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 9850527 Score = 246 bits (124), Expect = 5e-62 Identities = 141/147 (95%) Strand = Plus / Minus Query: 285 gtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatc 344 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 9850435 gtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatc 9850376 Query: 345 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccg 404 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 9850375 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccg 9850316 Query: 405 ccgcacctcctccgcccctcgccgccg 431 ||||||||||||||||||||||||||| Sbjct: 9850315 ccgcacctcctccgcccctcgccgccg 9850289 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 204 cacttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggc 263 |||||||||| |||||||| ||| |||||||||| ||||| ||||||||| ||||||| Sbjct: 7666824 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatcgccgacaagcacaccggc 7666765 Query: 264 cgctccaagggctacggctttgt 286 ||||||||||||||||| ||||| Sbjct: 7666764 cgctccaagggctacggttttgt 7666742
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 278 bits (140), Expect = 1e-71 Identities = 161/168 (95%) Strand = Plus / Minus Query: 113 gcagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggc 172 ||||||||||||||| ||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 14962 gcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggc 14903 Query: 173 gtgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcga 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14902 gtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcga 14843 Query: 233 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 280 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14842 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 14795 Score = 246 bits (124), Expect = 5e-62 Identities = 141/147 (95%) Strand = Plus / Minus Query: 285 gtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatc 344 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 14703 gtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatc 14644 Query: 345 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccg 404 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 14643 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccg 14584 Query: 405 ccgcacctcctccgcccctcgccgccg 431 ||||||||||||||||||||||||||| Sbjct: 14583 ccgcacctcctccgcccctcgccgccg 14557
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 278 bits (140), Expect = 1e-71 Identities = 161/168 (95%) Strand = Plus / Plus Query: 113 gcagccggcggcggccttcggggacaccacgctgaccaaggtgttcgtgggcgggctggc 172 ||||||||||||||| ||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 21924 gcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggc 21983 Query: 173 gtgggagacgcacaaggacaccctccgcgagcacttcgagcgcttcggcgacatcctcga 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 21984 gtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcga 22043 Query: 233 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 280 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22044 ggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 22091 Score = 246 bits (124), Expect = 5e-62 Identities = 141/147 (95%) Strand = Plus / Plus Query: 285 gtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtcatc 344 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 22183 gtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatc 22242 Query: 345 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccnagccgcggccccagccg 404 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 22243 aacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccg 22302 Query: 405 ccgcacctcctccgcccctcgccgccg 431 ||||||||||||||||||||||||||| Sbjct: 22303 ccgcacctcctccgcccctcgccgccg 22329
>dbj|AK058664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G07, full insert sequence Length = 1610 Score = 123 bits (62), Expect = 5e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 434 ttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgtgggagacgccgtcg 493 Query: 189 gacaccctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctcc 248 || ||||| ||||||||||| | |||||| ||||| ||||||||| ||||| || Sbjct: 494 gagggactccggcggcacttcgagcagtacggcgagatcctggaggccgtcgtcatcgcc 553 Query: 249 gacaagctcaccggccgctccaagggctacggctttgtgacgttcaaggaggcggatgcg 308 ||| |||||||||||||||||||||||||| || ||||||||| ||||||||| ||| Sbjct: 554 gaccgcctcaccggccgctccaagggctacggattcgtgacgttccgggaggcggaggcg 613 Query: 309 gc 310 || Sbjct: 614 gc 615 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggccgccgcgccaactgcaac 368 |||||||||||||||||||||| Sbjct: 652 cggccgccgcgccaactgcaac 673
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 103 bits (52), Expect = 5e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 6224818 ttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgtgggagacgccgtcg 6224759 Query: 189 gacaccctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctcc 248 || ||||| ||||||||||| | |||||| ||||| ||||||||| ||||| || Sbjct: 6224758 gagggactccggcggcacttcgagcagtacggcgagatcctggaggccgtcgtcatcgcc 6224699 Query: 249 gacaagctcaccggccgctccaagggctacgg 280 ||| |||||||||||||||||||||||||| Sbjct: 6224698 gaccgcctcaccggccgctccaagggctacgg 6224667 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgc 183 |||||||||||||| || ||||| ||||||||||||| Sbjct: 24674807 accaaggtgttcgtcggggggctcgcgtgggagacgc 24674771 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggccgccgcgccaactgcaac 368 |||||||||||||||||||||| Sbjct: 6224513 cggccgccgcgccaactgcaac 6224492
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 103 bits (52), Expect = 5e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 138637 ttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgtgggagacgccgtcg 138578 Query: 189 gacaccctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctcc 248 || ||||| ||||||||||| | |||||| ||||| ||||||||| ||||| || Sbjct: 138577 gagggactccggcggcacttcgagcagtacggcgagatcctggaggccgtcgtcatcgcc 138518 Query: 249 gacaagctcaccggccgctccaagggctacgg 280 ||| |||||||||||||||||||||||||| Sbjct: 138517 gaccgcctcaccggccgctccaagggctacgg 138486 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggccgccgcgccaactgcaac 368 |||||||||||||||||||||| Sbjct: 138332 cggccgccgcgccaactgcaac 138311
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 103 bits (52), Expect = 5e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 18894 ttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgtgggagacgccgtcg 18835 Query: 189 gacaccctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctcc 248 || ||||| ||||||||||| | |||||| ||||| ||||||||| ||||| || Sbjct: 18834 gagggactccggcggcacttcgagcagtacggcgagatcctggaggccgtcgtcatcgcc 18775 Query: 249 gacaagctcaccggccgctccaagggctacgg 280 ||| |||||||||||||||||||||||||| Sbjct: 18774 gaccgcctcaccggccgctccaagggctacgg 18743 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggccgccgcgccaactgcaac 368 |||||||||||||||||||||| Sbjct: 18589 cggccgccgcgccaactgcaac 18568
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 204 cacttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggc 263 |||||||||| |||||||| ||| |||||||||| ||||| ||||||||| ||||||| Sbjct: 46301 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatcgccgacaagcacaccggc 46360 Query: 264 cgctccaagggctacggctttgt 286 ||||||||||||||||| ||||| Sbjct: 46361 cgctccaagggctacggttttgt 46383
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 205 acttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggcc 264 ||||||||| |||||||| ||||||||||||||| ||||| |||||||| ||||||| Sbjct: 42240671 acttcgagcagttcggcgatatcctcgaggccgtcgtcatcaccgacaagaacaccggca 42240730 Query: 265 gctccaagggctacggctttgtga 288 | |||||||||||||| ||||||| Sbjct: 42240731 gatccaagggctacggatttgtga 42240754 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 231 gaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggctttgtgacg 290 ||||||||| ||||| |||||||| |||||||||||||||||||||||| || || ||| Sbjct: 24367891 gaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacgggttcgtcacg 24367832 Query: 291 ttc 293 ||| Sbjct: 24367831 ttc 24367829 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct: 42240595 ttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaag 42240654 Query: 189 ga 190 || Sbjct: 42240655 ga 42240656 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgcacaagga 190 ||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 38041544 accaaggtgtttgtaggagggctggcatgggagacccagaagga 38041587
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 205 acttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggcc 264 ||||||||| |||||||| ||||||||||||||| ||||| |||||||| ||||||| Sbjct: 12628 acttcgagcagttcggcgatatcctcgaggccgtcgtcatcaccgacaagaacaccggca 12687 Query: 265 gctccaagggctacggctttgtga 288 | |||||||||||||| ||||||| Sbjct: 12688 gatccaagggctacggatttgtga 12711 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct: 12552 ttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaag 12611 Query: 189 ga 190 || Sbjct: 12612 ga 12613
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 205 acttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggcc 264 ||||||||| |||||||| ||||||||||||||| ||||| |||||||| ||||||| Sbjct: 113869 acttcgagcagttcggcgatatcctcgaggccgtcgtcatcaccgacaagaacaccggca 113928 Query: 265 gctccaagggctacggctttgtga 288 | |||||||||||||| ||||||| Sbjct: 113929 gatccaagggctacggatttgtga 113952 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct: 113793 ttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaag 113852 Query: 189 ga 190 || Sbjct: 113853 ga 113854
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgc 183 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 31800373 ttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgc 31800427 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 213 cgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaag 272 |||||||| || ||||||||||||||| ||||| ||||| | | |||||||||||||| Sbjct: 29613481 cgcttcggggagatcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaag 29613540 Query: 273 ggctacggctt 283 ||||||||||| Sbjct: 29613541 ggctacggctt 29613551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagac 181 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 29613397 ttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 29613449 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 cggcgacatcctcgaggccgtcatcatctccga 250 |||||| ||||||||||||||| ||||| |||| Sbjct: 31800462 cggcgaaatcctcgaggccgtcgtcatcaccga 31800494 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gccgccgcacctcctccgcc 420 |||||||||||||||||||| Sbjct: 6056358 gccgccgcacctcctccgcc 6056377
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgc 183 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 96171 ttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgc 96225 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 cggcgacatcctcgaggccgtcatcatctccga 250 |||||| ||||||||||||||| ||||| |||| Sbjct: 96260 cggcgaaatcctcgaggccgtcgtcatcaccga 96292
>dbj|AK106338.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G04, full insert sequence Length = 3440 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgc 183 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 304 ttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtgggagacgc 358 Score = 46.1 bits (23), Expect = 0.095 Identities = 71/87 (81%) Strand = Plus / Plus Query: 218 cggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggcta 277 |||||| ||||||||||||||| ||||| |||| ||| ||||||| |||||||| Sbjct: 393 cggcgaaatcctcgaggccgtcgtcatcaccgatcgcgagaccagccgctctaagggcta 452 Query: 278 cggctttgtgacgttcaaggaggcgga 304 ||| || |||||||||| |||| |||| Sbjct: 453 cggattcgtgacgttcagggagccgga 479
>ref|NM_189337.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 205 acttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggcc 264 ||||||||| |||||||| ||||||||||||||| ||||| |||||||| ||||||| Sbjct: 119 acttcgagcagttcggcgatatcctcgaggccgtcgtcatcaccgacaagaacaccggca 178 Query: 265 gctccaagggctacggctttgt 286 | |||||||||||||| ||||| Sbjct: 179 gatccaagggctacggatttgt 200 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct: 43 ttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaag 102 Query: 189 ga 190 || Sbjct: 103 ga 104
>dbj|AK072960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K08, full insert sequence Length = 2247 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 205 acttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggcc 264 ||||||||| |||||||| ||||||||||||||| ||||| |||||||| ||||||| Sbjct: 430 acttcgagcagttcggcgatatcctcgaggccgtcgtcatcaccgacaagaacaccggca 489 Query: 265 gctccaagggctacggctttgt 286 | |||||||||||||| ||||| Sbjct: 490 gatccaagggctacggatttgt 511 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagacgcacaag 188 ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct: 354 ttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaag 413 Query: 189 ga 190 || Sbjct: 414 ga 415
>gb|AY084706.1| Arabidopsis thaliana clone 1156 mRNA, complete sequence Length = 999 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 222 gacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggc 281 |||||| | ||||| ||||| ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 195 gacatcttggaggcagtcattatctccgacaaactcactcgccgttccaaaggatatggc 254 Query: 282 tttgtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtc 341 |||||||| ||||| || ||||| || |||| || || ||||| ||| || ||| || Sbjct: 255 tttgtgactttcaaagatgcggaagctgccacgagagcttgcgaagactctactccgatc 314 Query: 342 atcaacggccgccgcgccaactgcaacctcgcgtccctcgg 382 ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 315 atcaatggccgccgtgccaactgcaatctcgcctccctcgg 355
>dbj|AK073538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041C14, full insert sequence Length = 1900 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 213 cgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaag 272 |||||||| || ||||||||||||||| ||||| ||||| | | |||||||||||||| Sbjct: 209 cgcttcggggagatcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaag 268 Query: 273 ggctacggctttgtgacgttc 293 ||||||||||| ||||||||| Sbjct: 269 ggctacggcttcgtgacgttc 289 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagac 181 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 125 ttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 177
>dbj|AK067428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D05, full insert sequence Length = 2190 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 213 cgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaag 272 |||||||| || ||||||||||||||| ||||| ||||| | | |||||||||||||| Sbjct: 367 cgcttcggggagatcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaag 426 Query: 273 ggctacggctttgtgacgttc 293 ||||||||||| ||||||||| Sbjct: 427 ggctacggcttcgtgacgttc 447 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagac 181 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 283 ttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 335
>ref|NM_001035783.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G54770 transcript variant AT3G54770.2 mRNA, complete cds Length = 829 Score = 73.8 bits (37), Expect = 4e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 222 gacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggc 281 |||||| | ||||| ||||| ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 121 gacatcttggaggcagtcattatctccgacaaactcactcgccgttccaaaggatatggc 180 Query: 282 tttgtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtc 341 |||||||| ||||| || ||| | || |||| || || ||||| ||| || ||| || Sbjct: 181 tttgtgactttcaaagatgcgaaagctgccacgagagcttgcgaagactctactccgatc 240 Query: 342 atcaacggccgccgcgccaactgcaacctcgcgtccctcgg 382 ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 241 atcaatggccgccgtgccaactgcaatctcgcctccctcgg 281
>ref|NM_115334.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G54770 transcript variant AT3G54770.1 mRNA, complete cds Length = 998 Score = 73.8 bits (37), Expect = 4e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 222 gacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggc 281 |||||| | ||||| ||||| ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 195 gacatcttggaggcagtcattatctccgacaaactcactcgccgttccaaaggatatggc 254 Query: 282 tttgtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtc 341 |||||||| ||||| || ||| | || |||| || || ||||| ||| || ||| || Sbjct: 255 tttgtgactttcaaagatgcgaaagctgccacgagagcttgcgaagactctactccgatc 314 Query: 342 atcaacggccgccgcgccaactgcaacctcgcgtccctcgg 382 ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 315 atcaatggccgccgtgccaactgcaatctcgcctccctcgg 355
>gb|BT015443.1| Arabidopsis thaliana At3g54770 mRNA sequence Length = 750 Score = 73.8 bits (37), Expect = 4e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 222 gacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggc 281 |||||| | ||||| ||||| ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 121 gacatcttggaggcagtcattatctccgacaaactcactcgccgttccaaaggatatggc 180 Query: 282 tttgtgacgttcaaggaggcggatgcggccaagaaggcgtgcgaggacggcacgccggtc 341 |||||||| ||||| || ||| | || |||| || || ||||| ||| || ||| || Sbjct: 181 tttgtgactttcaaagatgcgaaagctgccacgagagcttgcgaagactctactccgatc 240 Query: 342 atcaacggccgccgcgccaactgcaacctcgcgtccctcgg 382 ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 241 atcaatggccgccgtgccaactgcaatctcgcctccctcgg 281
>ref|NM_192778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 231 gaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggctttgtgacg 290 ||||||||| ||||| |||||||| |||||||||||||||||||||||| || || ||| Sbjct: 310 gaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacgggttcgtcacg 369 Query: 291 ttc 293 ||| Sbjct: 370 ttc 372
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 231 gaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggctttgtgacg 290 ||||||||| ||||| |||||||| |||||||||||||||||||||||| || || ||| Sbjct: 113795 gaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacgggttcgtcacg 113736 Query: 291 ttc 293 ||| Sbjct: 113735 ttc 113733
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 213 cgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaag 272 |||||||| || ||||||||||||||| ||||| ||||| | | |||||||||||||| Sbjct: 71202 cgcttcggggagatcctcgaggccgtcgtcatcaccgaccgccactccggccgctccaag 71261 Query: 273 ggctacggctt 283 ||||||||||| Sbjct: 71262 ggctacggctt 71272 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 129 ttcggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagac 181 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 71118 ttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 71170
>dbj|AK120636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K01, full insert sequence Length = 1754 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 231 gaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggctttgtgacg 290 ||||||||| ||||| |||||||| |||||||||||||||||||||||| || || ||| Sbjct: 378 gaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacgggttcgtcacg 437 Query: 291 ttc 293 ||| Sbjct: 438 ttc 440
>dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918b, complete sequence Length = 41851 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 132 ggggacaccacgctgaccaaggtgttcgtgggcgggctggcgtgggagac 181 ||||||||||| ||||||| ||||||||||| |||||||| |||||||| Sbjct: 11989 ggggacaccacattgaccaaagtgttcgtgggagggctggcctgggagac 12038 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 285 gtgacgttcaaggaggcggatgcggccaagaaggcgtgcgagga 328 ||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 12231 gtgacattcaaggaagcagaggcggccaagaaggcttgcgagga 12274
>emb|AL138650.1|ATT5N23 Arabidopsis thaliana DNA chromosome 3, BAC clone T5N23 Length = 90335 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 340 tcatcaacggccgccgcgccaactgcaacctcgcgtccctcgg 382 ||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 49323 tcatcaatggccgccgtgccaactgcaatctcgcctccctcgg 49281 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 222 gacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggc 281 |||||| | ||||| ||||| ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 49527 gacatcttggaggcagtcattatctccgacaaactcactcgccgttccaaaggatatggc 49468 Query: 282 tttgt 286 ||||| Sbjct: 49467 tttgt 49463
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 257 caccggccgctccaagggctacggctttgtg 287 |||||||||||||||||||| |||||||||| Sbjct: 4701661 caccggccgctccaagggcttcggctttgtg 4701691
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgc 183 |||||||||||||| || ||||| ||||||||||||| Sbjct: 8488 accaaggtgttcgtcggggggctcgcgtgggagacgc 8452
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgc 183 |||||||||||||| || ||||| ||||||||||||| Sbjct: 158000 accaaggtgttcgtcggggggctcgcgtgggagacgc 157964
>dbj|AK065654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035J16, full insert sequence Length = 1743 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgc 183 |||||||||||||| || ||||| ||||||||||||| Sbjct: 360 accaaggtgttcgtcggggggctcgcgtgggagacgc 396
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgccgccg 431 ||||||||||| ||||||||||||||||||| Sbjct: 1649734 agccgccgcactccctccgcccctcgccgccg 1649765
>gb|AC165377.4| Nomascus leucogenys leucogenys clone CH271-412A17, complete sequence Length = 195646 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgccgccg 431 ||||||||||| ||||||||||||||||||| Sbjct: 192649 agccgccgcactccctccgcccctcgccgccg 192680
>gb|BT016236.1| Zea mays clone Contig69 mRNA sequence Length = 1357 Score = 46.1 bits (23), Expect = 0.095 Identities = 50/59 (84%) Strand = Plus / Minus Query: 222 gacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacgg 280 ||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||| Sbjct: 1086 gacatcctcgaggccgttgtcatcaccgaccgcgccacaggccgctccaagggctacgg 1028 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgc 183 |||||||| ||||||||||| || || |||||||||| Sbjct: 1161 accaaggttttcgtgggcggcctcgcctgggagacgc 1125
>ref|XM_533918.2| PREDICTED: Canis familiaris similar to Non-receptor tyrosine-protein kinase TYK2 (LOC476714), mRNA Length = 5586 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 257 caccggccgctccaagggctacggctt 283 |||||||| |||||||||||||||||| Sbjct: 3864 caccggccactccaagggctacggctt 3890
>gb|AE006024.1| Caulobacter crescentus CB15 section 350 of 359 of the complete genome Length = 11264 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 207 ttcgagcgcttcggcgacatcct 229 ||||||||||||||||||||||| Sbjct: 5167 ttcgagcgcttcggcgacatcct 5145
>gb|AE005127.1| Halobacterium sp. NRC-1 section 158 of 170 of the complete genome Length = 10420 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 334 cgccggtcatcaacggccgccgc 356 ||||||||||||||||||||||| Sbjct: 8187 cgccggtcatcaacggccgccgc 8209 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gcgaggacggcacgccggtc 341 |||||||||||||||||||| Sbjct: 3282 gcgaggacggcacgccggtc 3263
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 398 ccagccgccgcacctcctccgcc 420 ||||||||||||||||||||||| Sbjct: 20372 ccagccgccgcacctcctccgcc 20350
>ref|NM_187061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1497 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 410 cctcctccgcccctcgccgccg 431 |||||||||||||||||||||| Sbjct: 1311 cctcctccgcccctcgccgccg 1290
>gb|DQ116383.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA, complete cds Length = 1626 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 410 cctcctccgcccctcgccgccg 431 |||||||||||||||||||||| Sbjct: 1346 cctcctccgcccctcgccgccg 1325
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 410 cctcctccgcccctcgccgccg 431 |||||||||||||||||||||| Sbjct: 15240946 cctcctccgcccctcgccgccg 15240925
>gb|AY884164.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA, complete cds Length = 1584 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 410 cctcctccgcccctcgccgccg 431 |||||||||||||||||||||| Sbjct: 1370 cctcctccgcccctcgccgccg 1349
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 410 cctcctccgcccctcgccgccg 431 |||||||||||||||||||||| Sbjct: 26959 cctcctccgcccctcgccgccg 26938
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 410 cctcctccgcccctcgccgccg 431 |||||||||||||||||||||| Sbjct: 107695 cctcctccgcccctcgccgccg 107674
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 cgccggtcatcaacggccgccg 355 |||||||||||||||||||||| Sbjct: 2628125 cgccggtcatcaacggccgccg 2628146
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 cgcttcggcgacatcctcgaggccg 237 ||||||||||||||||||| ||||| Sbjct: 2930942 cgcttcggcgacatcctcgtggccg 2930918
>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24, complete sequence Length = 146492 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 gttcaaggaggcggatgcggc 310 ||||||||||||||||||||| Sbjct: 135065 gttcaaggaggcggatgcggc 135085
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 gttcaaggaggcggatgcggc 310 ||||||||||||||||||||| Sbjct: 9332 gttcaaggaggcggatgcggc 9352
>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 7/10 Length = 349575 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gcagcctcagcaggtgcagcc 118 ||||||||||||||||||||| Sbjct: 217221 gcagcctcagcaggtgcagcc 217201
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 gttcaaggaggcggatgcggc 310 ||||||||||||||||||||| Sbjct: 8212844 gttcaaggaggcggatgcggc 8212864 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccgccgcacctcctccgcccc 422 |||||||| ||||||||||||||| Sbjct: 21521527 cagccgcctcacctcctccgcccc 21521550
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgctccaagggctacggctttgtga 288 |||||||||||||| |||||||||| Sbjct: 7635 cgctccaagggctatggctttgtga 7659
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gcagcctcagcaggtgcagcc 118 ||||||||||||||||||||| Sbjct: 2340525 gcagcctcagcaggtgcagcc 2340505
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 gaggacggcacgccggtcatc 344 ||||||||||||||||||||| Sbjct: 168793 gaggacggcacgccggtcatc 168813
>dbj|AK057989.1| Homo sapiens cDNA FLJ25260 fis, clone STM04650, highly similar to TROPOMYOSIN, FIBROBLAST ISOFORM 2 Length = 1575 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 ctcctccgcccctcgccgccg 431 ||||||||||||||||||||| Sbjct: 14 ctcctccgcccctcgccgccg 34
>dbj|AK102937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J19, full insert sequence Length = 2977 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 gttcaaggaggcggatgcggc 310 ||||||||||||||||||||| Sbjct: 186 gttcaaggaggcggatgcggc 206
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 cgagcgcttcggcgacatcctcgag 233 |||||||||||||||||||| |||| Sbjct: 2599301 cgagcgcttcggcgacatccccgag 2599325 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 208 tcgagcgcttcggcgacatcctcgaggc 235 |||||||||||| |||||||| |||||| Sbjct: 942783 tcgagcgcttcgccgacatccccgaggc 942756
>ref|NM_202159.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G22910 transcript variant AT1G22910.2 mRNA, complete cds Length = 1273 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgtgacgttcaaggaggcggatgcggc 310 |||||||||||||| || ||||| |||| ||| ||||| ||||| Sbjct: 157 tccaagggctacggattcgtgacattcagggaagcggaggcggc 200
>ref|NM_102138.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G22910 transcript variant AT1G22910.1 mRNA, complete cds Length = 1474 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgtgacgttcaaggaggcggatgcggc 310 |||||||||||||| || ||||| |||| ||| ||||| ||||| Sbjct: 376 tccaagggctacggattcgtgacattcagggaagcggaggcggc 419
>ref|NM_202160.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G22910 transcript variant AT1G22910.3 mRNA, complete cds Length = 1478 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgtgacgttcaaggaggcggatgcggc 310 |||||||||||||| || ||||| |||| ||| ||||| ||||| Sbjct: 376 tccaagggctacggattcgtgacattcagggaagcggaggcggc 419
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 ccggccgctccaagggctacggctttgt 286 |||||||||||||||||| ||| ||||| Sbjct: 1162709 ccggccgctccaagggcttcggttttgt 1162736
>ref|XM_508598.1| PREDICTED: Pan troglodytes similar to phosphatidylinositol transfer protein, membrane-associated; PYK2 N-terminal domain-interacting receptor 2; retinal degeneration B alpha 1 (Drosophila) (LOC451372), mRNA Length = 4383 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ccccagccgccgcacctcct 415 |||||||||||||||||||| Sbjct: 3771 ccccagccgccgcacctcct 3752
>ref|XM_464574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gccgccgcacctcctccgcc 420 |||||||||||||||||||| Sbjct: 78 gccgccgcacctcctccgcc 97
>ref|NM_190125.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgcacaagga 190 ||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 46 accaaggtgtttgtaggagggctggcatgggagacccagaagga 89
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccgccgcacctcctccgcccc 422 |||||||| ||||||||||||||| Sbjct: 75383 cagccgcctcacctcctccgcccc 75406
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccgccgcacctcctccgcccc 422 |||||||| ||||||||||||||| Sbjct: 114610 cagccgcctcacctcctccgcccc 114633
>ref|XM_417367.1| PREDICTED: Gallus gallus similar to embryonic poly(A) binding protein (LOC419189), mRNA Length = 2079 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 caccggccgctccaagggct 276 |||||||||||||||||||| Sbjct: 789 caccggccgctccaagggct 808
>gb|AC087103.3| Papio anubis clone RP41-353B7, complete sequence Length = 172661 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgcc 427 ||||||||||| ||||||||||||||| Sbjct: 87283 agccgccgcactccctccgcccctcgcc 87310
>ref|XM_381286.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01110.1) partial mRNA Length = 1749 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgt 286 |||||||||||||||||||| Sbjct: 757 tccaagggctacggctttgt 776
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cagccgccgcacctcctccg 418 |||||||||||||||||||| Sbjct: 178016 cagccgccgcacctcctccg 178035
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 aggtgcagccggcggcggcc 128 |||||||||||||||||||| Sbjct: 3582306 aggtgcagccggcggcggcc 3582287
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tcgagcgcttcggcgacatc 227 |||||||||||||||||||| Sbjct: 269089 tcgagcgcttcggcgacatc 269070
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tcggcgacatcctcgaggcc 236 |||||||||||||||||||| Sbjct: 149868 tcggcgacatcctcgaggcc 149887
>gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B16, complete sequence Length = 185755 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgccgccg 431 ||||||||| | ||||||||||||||||||| Sbjct: 48248 agccgccgcgctccctccgcccctcgccgccg 48279
>ref|NM_164735.1| Drosophila melanogaster CG11266-RG, transcript variant G (CG11266), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1661 ggccgatccaagggctacggcttt 1684
>ref|NM_164734.1| Drosophila melanogaster CG11266-RF, transcript variant F (CG11266), mRNA Length = 2552 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1714 ggccgatccaagggctacggcttt 1737
>ref|NM_164733.1| Drosophila melanogaster CG11266-RD, transcript variant D (CG11266), mRNA Length = 2574 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1736 ggccgatccaagggctacggcttt 1759
>ref|NM_164732.1| Drosophila melanogaster CG11266-RC, transcript variant C (CG11266), mRNA Length = 2625 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1787 ggccgatccaagggctacggcttt 1810
>ref|NM_164731.1| Drosophila melanogaster CG11266-RE, transcript variant E (CG11266), mRNA Length = 2282 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1444 ggccgatccaagggctacggcttt 1467
>ref|NM_164730.1| Drosophila melanogaster CG11266-RA, transcript variant A (CG11266), mRNA Length = 2143 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1305 ggccgatccaagggctacggcttt 1328
>ref|NM_135251.2| Drosophila melanogaster CG11266-RB, transcript variant B (CG11266), mRNA Length = 2194 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1356 ggccgatccaagggctacggcttt 1379
>gb|AF367334.1| Arabidopsis thaliana At1g22910/F19G10_13 mRNA, complete cds Length = 1478 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgtgacgttcaaggaggcggatgcggc 310 |||||||||||||| || ||||| |||| ||| ||||| ||||| Sbjct: 380 tccaagggctacggattcgtgacattcagggaagcggaggcggc 423
>gb|DQ314862.1| Streptomyces hygroscopicus strain NRRL 2388 hygromycin A biosynthetic gene cluster, complete sequence Length = 39151 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tcgagcgcttcggcgacatc 227 |||||||||||||||||||| Sbjct: 23347 tcgagcgcttcggcgacatc 23366
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 gaggcggatgcggccaagaaggcg 320 ||||||||||| |||||||||||| Sbjct: 3219797 gaggcggatgcagccaagaaggcg 3219774
>gb|AY058222.1| Arabidopsis thaliana At1g22910/F19G10_13 mRNA, complete cds Length = 750 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgtgacgttcaaggaggcggatgcggc 310 |||||||||||||| || ||||| |||| ||| ||||| ||||| Sbjct: 157 tccaagggctacggattcgtgacattcagggaagcggaggcggc 200
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgcc 427 ||||||||||| ||||||||||||||| Sbjct: 1647639 agccgccgcactccctccgcccctcgcc 1647666
>gb|AC008326.9| Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR39J17, complete sequence Length = 148780 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 86853 ggccgatccaagggctacggcttt 86876
>gb|AY051860.1| Drosophila melanogaster LD35730 full length cDNA Length = 2433 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 1331 ggccgatccaagggctacggcttt 1354
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 aagggctacggctttgtgacgttc 293 ||||||||||||||||||| |||| Sbjct: 1238767 aagggctacggctttgtgaagttc 1238790
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 143555 ggccgatccaagggctacggcttt 143578
>emb|BX813829.1|CNS0AC93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 267 tccaagggctacggctttgtgacgttcaaggaggcggatgcggc 310 |||||||||||||| || ||||| |||| ||| ||||| ||||| Sbjct: 246 tccaagggctacggattcgtgacattcagggaagcggaggcggc 289
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgcc 427 ||||||||||| ||||||||||||||| Sbjct: 1632952 agccgccgcactccctccgcccctcgcc 1632979
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgcc 427 ||||||||||| ||||||||||||||| Sbjct: 1673519 agccgccgcactccctccgcccctcgcc 1673546
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccattcagctccatcctct 32 |||||||||||||||||||| Sbjct: 308291 gccattcagctccatcctct 308310
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgcacaagga 190 ||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 122488 accaaggtgtttgtaggagggctggcatgggagacccagaagga 122531
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 147 accaaggtgttcgtgggcgggctggcgtgggagacgcacaagga 190 ||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 9578 accaaggtgtttgtaggagggctggcatgggagacccagaagga 9621
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gccgccgcacctcctccgcc 420 |||||||||||||||||||| Sbjct: 21840 gccgccgcacctcctccgcc 21859
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gccgccgcacctcctccgcc 420 |||||||||||||||||||| Sbjct: 77197 gccgccgcacctcctccgcc 77216
>gb|AC150803.4| Macaca mulatta clone CH250-537P21, complete sequence Length = 71130 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgcc 427 ||||||||||| ||||||||||||||| Sbjct: 40220 agccgccgcactccctccgcccctcgcc 40247
>ref|NM_209756.1| Eremothecium gossypii ADR307Wp (ADR307W), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 aagggctacggctttgtgacgttc 293 ||||||||||||||||||| |||| Sbjct: 547 aagggctacggctttgtgaagttc 570
>gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequence Length = 167396 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgccgccg 431 ||||||||| | ||||||||||||||||||| Sbjct: 121786 agccgccgcgctccctccgcccctcgccgccg 121817
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggccgctccaagggctacggcttt 284 ||||| |||||||||||||||||| Sbjct: 9358 ggccgatccaagggctacggcttt 9381
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tccgcgagcacttcgagcgc 215 |||||||||||||||||||| Sbjct: 2429764 tccgcgagcacttcgagcgc 2429745
>gb|AC138552.3| Cercopithecus aethiops clone CH252-371N21, complete sequence Length = 173111 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 agccgccgcacctcctccgcccctcgcc 427 ||||||||||| ||||||||||||||| Sbjct: 21606 agccgccgcactccctccgcccctcgcc 21633
>gb|U39940.1|RMU39940 Sinorhizobium meliloti bet operon, complete sequence Length = 6379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 cagccgccgcacctcctccg 418 |||||||||||||||||||| Sbjct: 1081 cagccgccgcacctcctccg 1062
>gb|AY495828.1| Oryctolagus cuniculus clone 196O2 kappa 1 light chain immunglobulin gene region Length = 178084 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cagcctcagcaggtgcagcc 118 |||||||||||||||||||| Sbjct: 33928 cagcctcagcaggtgcagcc 33909
>gb|AY495826.1| Oryctolagus cuniculus clone 215M22 kappa 1 light chain immunglobulin gene region Length = 141991 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cagcctcagcaggtgcagcc 118 |||||||||||||||||||| Sbjct: 52538 cagcctcagcaggtgcagcc 52519
>dbj|AP001184.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-715F10, complete sequences Length = 120186 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 ccccagccgccgcacctcct 415 |||||||||||||||||||| Sbjct: 9974 ccccagccgccgcacctcct 9993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,224,452 Number of Sequences: 3902068 Number of extensions: 3224452 Number of successful extensions: 61543 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59732 Number of HSP's gapped (non-prelim): 1801 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
