ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468571.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 79 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 138 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 139 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 198 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 199 cgcctcggcccccacc 214
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 577408 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 577467 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 577468 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 577527 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 577528 cgcctcggcccccacc 577543 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 |||||||||||||||||||||||||| Sbjct: 33312279 ccacccccacccccaccacgaccacc 33312304 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 25748910 ctcctcctcgccgccgccgcg 25748890 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cgagcccctccacgccgccgt 406 ||||||||||||||||||||| Sbjct: 12769418 cgagcccctccacgccgccgt 12769438 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 cgccagccatggccgcccgccgcg 138 |||| ||||||||||||||||||| Sbjct: 34023397 cgcctgccatggccgcccgccgcg 34023420 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tccacccccacccccaccac 359 |||||||||||||||||||| Sbjct: 32757621 tccacccccacccccaccac 32757602 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtgctgctcctcctcgccg 156 |||||||||||||||||||| Sbjct: 32498444 cgtgctgctcctcctcgccg 32498463 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 27434892 ctcctcctcgccgccgccgc 27434873 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tgctgctcctcctcgccgccgccg 162 ||||||||||||| |||||||||| Sbjct: 20607117 tgctgctcctccttgccgccgccg 20607140 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 14236315 ctcctcctcgccgccgccgc 14236296 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 7181074 ctcctcctcgccgccgccgc 7181093 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 676368 ctcctcctcgccgccgccgc 676387
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 577406 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 577465 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 577466 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 577525 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 577526 cgcctcggcccccacc 577541 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 |||||||||||||||||||||||||| Sbjct: 33402789 ccacccccacccccaccacgaccacc 33402814 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 25840219 ctcctcctcgccgccgccgcg 25840199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cgagcccctccacgccgccgt 406 ||||||||||||||||||||| Sbjct: 12766181 cgagcccctccacgccgccgt 12766201 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 cgccagccatggccgcccgccgcg 138 |||| ||||||||||||||||||| Sbjct: 34113869 cgcctgccatggccgcccgccgcg 34113892 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tccacccccacccccaccac 359 |||||||||||||||||||| Sbjct: 32848131 tccacccccacccccaccac 32848112 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtgctgctcctcctcgccg 156 |||||||||||||||||||| Sbjct: 32588954 cgtgctgctcctcctcgccg 32588973 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 27526215 ctcctcctcgccgccgccgc 27526196 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tgctgctcctcctcgccgccgccg 162 ||||||||||||| |||||||||| Sbjct: 20600146 tgctgctcctccttgccgccgccg 20600169 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 14231290 ctcctcctcgccgccgccgc 14231271 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 7178969 ctcctcctcgccgccgccgc 7178988 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 676366 ctcctcctcgccgccgccgc 676385
>dbj|AK106206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G02, full insert sequence Length = 1044 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 145 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 204 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 205 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 264 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 265 cgcctcggcccccacc 280
>dbj|AK066769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082M21, full insert sequence Length = 831 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 136 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 195 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 196 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 255 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 256 cgcctcggcccccacc 271
>dbj|AK066190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G16, full insert sequence Length = 807 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 143 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 202 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 203 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 262 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 263 cgcctcggcccccacc 278
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 151 bits (76), Expect = 2e-33 Identities = 121/136 (88%) Strand = Plus / Minus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | |||||| Sbjct: 38510 cgcccctgcggccacgcccagacgctcctcatctccttctcctccgtctccaggcccaac 38451 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 || ||||| | |||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 38450 cccgaccccaacaaccccactcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 38391 Query: 321 cgcctcggcccgcacc 336 ||||||||||| |||| Sbjct: 38390 cgcctcggcccccacc 38375
>gb|AY109005.1| Zea mays PCO121752 mRNA sequence Length = 921 Score = 135 bits (68), Expect = 1e-28 Identities = 119/136 (87%) Strand = Plus / Plus Query: 201 cgcccctgcggccgcgcgcagacgctgctcatctccttctcctccttctcccgccccaac 260 ||||| ||||||| |||||||||||| ||| |||||||||||||| || | | || ||| Sbjct: 172 cgcccgtgcggccacgcgcagacgctcctcgtctccttctcctccgtcctcaggccgaac 231 Query: 261 ccggacccggccgacccgtcgcccctcaccaccaccgtcgtcaccgtcctccgcgtccgc 320 |||||||| || ||||| |||| ||||||||||| ||||||||||||||||||||||| Sbjct: 232 ccggaccccaccaacccgacgccgctcaccaccacagtcgtcaccgtcctccgcgtccgg 291 Query: 321 cgcctcggcccgcacc 336 |||||||||||||||| Sbjct: 292 cgcctcggcccgcacc 307
>ref|NM_197061.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0012L23.34), mRNA Length = 883 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 292 ccaccgtcgtcaccgtcctccgcgtccgccgcctcggcccgcacc 336 |||| ||| |||||||| |||||||||||||||||||||| |||| Sbjct: 182 ccacggtcatcaccgtcttccgcgtccgccgcctcggcccccacc 226
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 292 ccaccgtcgtcaccgtcctccgcgtccgccgcctcggcccgcacc 336 |||| ||| |||||||| |||||||||||||||||||||| |||| Sbjct: 125685 ccacggtcatcaccgtcttccgcgtccgccgcctcggcccccacc 125729
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 292 ccaccgtcgtcaccgtcctccgcgtccgccgcctcggcccgcacc 336 |||| ||| |||||||| |||||||||||||||||||||| |||| Sbjct: 17770565 ccacggtcatcaccgtcttccgcgtccgccgcctcggcccccacc 17770609 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcgg 165 |||||||||||||||||||||| Sbjct: 12739637 ctcctcctcgccgccgccgcgg 12739616 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gccgccgcggtggccctcctc 176 ||||||||||||||||||||| Sbjct: 21947554 gccgccgcggtggccctcctc 21947574 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 12377804 ctcctcctcgccgccgccgc 12377823
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 292 ccaccgtcgtcaccgtcctccgcgtccgccgcctcggcccgcacc 336 |||| ||| |||||||| |||||||||||||||||||||| |||| Sbjct: 17779818 ccacggtcatcaccgtcttccgcgtccgccgcctcggcccccacc 17779862 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcgg 165 |||||||||||||||||||||| Sbjct: 12746977 ctcctcctcgccgccgccgcgg 12746956 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gccgccgcggtggccctcctc 176 ||||||||||||||||||||| Sbjct: 21959217 gccgccgcggtggccctcctc 21959237 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 12385144 ctcctcctcgccgccgccgc 12385163
>ref|XM_641035.1| Dictyostelium discoideum actin binding protein (DDB0231181), partial mRNA Length = 4686 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 340 tccacccccacccccaccacgaccacctcca 370 |||||||||||||||||||| |||||||||| Sbjct: 3135 tccacccccacccccaccaccaccacctcca 3165
>emb|AJ812236.1| Dictyostelium discoideum mRNA for diaphanous-related formin dDia3 (drf3 gene) Length = 4686 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 340 tccacccccacccccaccacgaccacctcca 370 |||||||||||||||||||| |||||||||| Sbjct: 3135 tccacccccacccccaccaccaccacctcca 3165
>ref|XM_470008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2457 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 |||||||||||||||||||||||||| Sbjct: 553 ccacccccacccccaccacgaccacc 528
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 |||||||||||||||||||||||||| Sbjct: 68795 ccacccccacccccaccacgaccacc 68820
>dbj|AK066048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048C24, full insert sequence Length = 2458 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 |||||||||||||||||||||||||| Sbjct: 554 ccacccccacccccaccacgaccacc 529
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 292 ccaccgtcgtcaccgtcctccgcgtccgccgcctcgg 328 |||| ||| |||||||| ||||||||||||||||||| Sbjct: 96475 ccacggtcatcaccgtcttccgcgtccgccgcctcgg 96511
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 228 ctcatctccttctcctccttctc 250 ||||||||||||||||||||||| Sbjct: 123862 ctcatctccttctcctccttctc 123884
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgccgc 163 ||||||||||||||||||||||| Sbjct: 128023 ctgctcctcctcgccgccgccgc 128045
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 228 ctcatctccttctcctccttctc 250 ||||||||||||||||||||||| Sbjct: 60625 ctcatctccttctcctccttctc 60647
>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence Length = 159112 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacctccag 371 ||||| |||||||||||||||||||| |||| Sbjct: 79205 ccaccaccacccccaccacgaccaccgccag 79235
>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence Length = 194636 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 340 tccacccccacccccaccacgaccacc 366 |||||||||||||||||||| |||||| Sbjct: 30812 tccacccccacccccaccaccaccacc 30786
>gb|U53466.2|U53466 Cydia pomonella granulovirus, complete genome Length = 123500 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacct 367 ||||||||||||||||||| ||||||| Sbjct: 42314 ccacccccacccccaccaccaccacct 42340
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 228 ctcatctccttctcctccttctc 250 ||||||||||||||||||||||| Sbjct: 19883564 ctcatctccttctcctccttctc 19883586 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgccgc 163 ||||||||||||||||||||||| Sbjct: 18392658 ctgctcctcctcgccgccgccgc 18392680 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ccgccgccccgccgagcccctccac 398 ||||||||| ||||||||||||||| Sbjct: 10536415 ccgccgcccagccgagcccctccac 10536391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 7470596 ctcctcctcgccgccgccgcg 7470576 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcggtggccctcctc 176 |||||||||||||||||||| | ||| |||||| Sbjct: 6428830 ctcctcctcgccgccgccgccgcggcgctcctc 6428798 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 1399276 ctgctcctcctcgccgccgcc 1399256 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 14383021 ctcctcctcgccgccgccgc 14383040 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgccgc 163 ||||| |||||||||||||||||| Sbjct: 11112767 gctgcccctcctcgccgccgccgc 11112744 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 6417007 ctcctcctcgccgccgccgc 6417026 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 6339781 ctcctcctcgccgccgccgc 6339800 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgccgc 163 |||||||||||||||||| ||||| Sbjct: 1992808 gctgctcctcctcgccgcggccgc 1992785 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ccacctccagatccgccgcc 381 |||||||||||||||||||| Sbjct: 1098139 ccacctccagatccgccgcc 1098158
>gb|AC017076.14| Homo sapiens BAC clone RP11-439M11 from 2, complete sequence Length = 118808 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacct 367 ||||||||||||||||||| ||||||| Sbjct: 97717 ccacccccacccccaccaccaccacct 97743
>gb|AC116666.2| Homo sapiens chromosome X clone RP11-329E24 map q28, complete sequence Length = 169351 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgacc 363 ||||||||||||||||||||||| Sbjct: 73361 ccacccccacccccaccacgacc 73339
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 cgtgctgctcctcctcgccgccgccgcggtg 167 ||||||| ||||| ||||||||||||||||| Sbjct: 4887583 cgtgctgttcctcgtcgccgccgccgcggtg 4887553
>dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020C01, full insert sequence Length = 3367 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgccgc 163 ||||||||||||||||||||||| Sbjct: 117 ctgctcctcctcgccgccgccgc 139
>dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H23, full insert sequence Length = 3413 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgccgc 163 ||||||||||||||||||||||| Sbjct: 163 ctgctcctcctcgccgccgccgc 185
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 197 cgcccgcccctgcggccgcgcgc 219 ||||||||||||||||||||||| Sbjct: 2965111 cgcccgcccctgcggccgcgcgc 2965133
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 228 ctcatctccttctcctccttctc 250 ||||||||||||||||||||||| Sbjct: 20168537 ctcatctccttctcctccttctc 20168559 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgccgc 163 ||||||||||||||||||||||| Sbjct: 18552059 ctgctcctcctcgccgccgccgc 18552081 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 19815311 gctcctcctcgccgccgccgc 19815331 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ccgccgccccgccgagcccctccac 398 ||||||||| ||||||||||||||| Sbjct: 10607959 ccgccgcccagccgagcccctccac 10607935 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 7540682 ctcctcctcgccgccgccgcg 7540662 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcggtggccctcctc 176 |||||||||||||||||||| | ||| |||||| Sbjct: 6495298 ctcctcctcgccgccgccgccgcggcgctcctc 6495266 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 1396997 ctgctcctcctcgccgccgcc 1396977 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 14465023 ctcctcctcgccgccgccgc 14465042 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgccgc 163 ||||| |||||||||||||||||| Sbjct: 11191956 gctgcccctcctcgccgccgccgc 11191933 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 6483475 ctcctcctcgccgccgccgc 6483494 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 6406248 ctcctcctcgccgccgccgc 6406267 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgccgc 163 |||||||||||||||||| ||||| Sbjct: 2000589 gctgctcctcctcgccgcggccgc 2000566 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ccacctccagatccgccgcc 381 |||||||||||||||||||| Sbjct: 1095860 ccacctccagatccgccgcc 1095879
>gb|AC165078.2| Mus musculus BAC clone RP24-287O1 from chromosome 12, complete sequence Length = 172492 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 |||||||||||||||||||| ||||| Sbjct: 96206 ccacccccacccccaccacgcccacc 96181
>ref|XM_475571.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1215 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 148 tcctcgccgccgccgcggtggccctcctcg 177 |||||||||||||||| | ||||||||||| Sbjct: 1139 tcctcgccgccgccgccgcggccctcctcg 1168
>ref|XM_450549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1358 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 152 cgccgccgccgcggtggccctcctcgcggc 181 |||||||||||| |||||||| |||||||| Sbjct: 46 cgccgccgccgccgtggccctgctcgcggc 75
>ref|NM_190082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1383 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 98 ccacccccacccccaccaccaccacc 73
>ref|XM_478541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2283 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tgctcctcctcgccgccgccgc 163 |||||||||||||||||||||| Sbjct: 91 tgctcctcctcgccgccgccgc 112
>gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence Length = 1602 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 132 cgccgcgtgctgctcctcctcgccgccgcc 161 |||| ||| ||||||||||||||||||||| Sbjct: 19 cgccacgtcctgctcctcctcgccgccgcc 48
>gb|AY663385.1| Aedes aegypti voltage-dependent para-like sodium channel mRNA, partial cds, alternatively spliced Length = 6317 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 caccaccaccgtcgtcaccgtc 308 |||||||||||||||||||||| Sbjct: 5896 caccaccaccgtcgtcaccgtc 5875
>gb|AC110133.5| Rattus norvegicus 3 BAC CH230-40N24 (Children's Hospital Oakland Research Institute) complete sequence Length = 32052 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 6629 ccacccccacccccaccaccaccacc 6604
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 149 cctcgccgccgccgcggtggccctcctcgc 178 |||||||||||||||| |||||| |||||| Sbjct: 239848 cctcgccgccgccgcgctggcccccctcgc 239819
>emb|BX005426.16| Zebrafish DNA sequence from clone DKEY-1H24 in linkage group 1, complete sequence Length = 202018 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 tccacccccacccccaccacgaccacctcc 369 |||||| ||||||||||||| ||||||||| Sbjct: 173885 tccaccaccacccccaccaccaccacctcc 173914
>gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, complete sequence Length = 235814 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 55847 ctccttctcctccttctcccgc 55826
>gb|BC050398.2| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae), mRNA (cDNA clone IMAGE:6046382), partial cds Length = 2444 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 1090 ctccttctcctccttctcccgc 1069
>gb|BC031917.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae), mRNA (cDNA clone IMAGE:4999464) Length = 2942 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 850 ctccttctcctccttctcccgc 829
>gb|BC067364.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae), transcript variant 1, mRNA (cDNA clone MGC:71266 IMAGE:6644672), complete cds Length = 3172 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 1075 ctccttctcctccttctcccgc 1054
>emb|AL391815.6| Human DNA sequence from clone RP11-223L24 on chromosome 6, complete sequence Length = 61274 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 53617 ccacccccacccccaccaccaccacc 53592
>ref|NM_001031698.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) (PRPF40B), transcript variant 1, mRNA Length = 3172 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 1075 ctccttctcctccttctcccgc 1054
>ref|NM_012272.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) (PRPF40B), transcript variant 2, mRNA Length = 3698 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 1544 ctccttctcctccttctcccgc 1523
>emb|AL035443.4|HS137H15 Human DNA sequence from clone RP1-137H15 on chromosome Xq26.2-27.2 Contains a novel gene, the ZIC3 gene for Zic family member 3 heterotaxy (odd-paired homolog, Drosophila) and four CpG islands, complete sequence Length = 109339 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||| |||||||| Sbjct: 69393 ccacccccacccccaccccgaccacc 69418
>emb|BX043245.1|CNS095J5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC15CH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 214 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgcc 161 |||||||||||||||||||||| Sbjct: 46 gctgctcctcctcgccgccgcc 25
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231332 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 17286 ccacccccacccccaccaccaccacc 17311
>emb|AL834216.1|HSM805637 Homo sapiens mRNA; cDNA DKFZp434O1520 (from clone DKFZp434O1520) Length = 3698 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 1544 ctccttctcctccttctcccgc 1523
>gb|AC112175.2| Homo sapiens chromosome 5 clone CTD-2568P10, complete sequence Length = 142712 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 tcatctccttctcctccttctc 250 |||||||||||||||||||||| Sbjct: 100048 tcatctccttctcctccttctc 100027
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcgg 165 |||||||||||||||||||||| Sbjct: 36076 ctcctcctcgccgccgccgcgg 36055
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcgg 165 |||||||||||||||||||||| Sbjct: 23925 ctcctcctcgccgccgccgcgg 23946
>gb|AC026688.7| Homo sapiens chromosome 5 clone CTB-158E9, complete sequence Length = 134778 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 tcatctccttctcctccttctc 250 |||||||||||||||||||||| Sbjct: 122137 tcatctccttctcctccttctc 122158
>gb|DP000040.1| Otolemur garnettii target 106 genomic scaffold Length = 277620 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 344 cccccacccccaccacgaccacctcc 369 |||||||||||| ||||||||||||| Sbjct: 258926 cccccacccccatcacgaccacctcc 258951
>gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosome 15, complete sequence Length = 181163 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 48780 ccacccccacccccaccaccaccacc 48805
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gaccgcccgcccctgcggccgcgcgc 219 ||||||||||||| |||||||||||| Sbjct: 499648 gaccgcccgccccagcggccgcgcgc 499673
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 tcctcgccgccgccgcggtggccctcctcg 177 |||||||||||||||| | ||||||||||| Sbjct: 577247 tcctcgccgccgccgccgcggccctcctcg 577218 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 cctcctcgccgccgccgcggtggcc 170 |||||||||||||||||||| |||| Sbjct: 26703931 cctcctcgccgccgccgcggcggcc 26703955 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 cgtgctgctcctcctcgccgc 157 ||||||||||||||||||||| Sbjct: 22481690 cgtgctgctcctcctcgccgc 22481710 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 1309355 ctgctcctcctcgccgccgcc 1309335 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 26331930 ctcctcctcgccgccgccgc 26331949 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tgctcctcctcgccgccgcc 161 |||||||||||||||||||| Sbjct: 24106014 tgctcctcctcgccgccgcc 24105995 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 21663361 ctcctcctcgccgccgccgc 21663342 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 5070452 ctcctcctcgccgccgccgc 5070433 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 2911080 ctcctcctcgccgccgccgc 2911099 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgccgc 163 |||||||||||||||||| ||||| Sbjct: 1908100 gctgctcctcctcgccgcggccgc 1908077
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 152 cgccgccgccgcggtggccctcctcgcggc 181 |||||||||||| |||||||| |||||||| Sbjct: 9599403 cgccgccgccgccgtggccctgctcgcggc 9599432 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 16904099 ctcctcctcgccgccgccgc 16904118 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 16384574 ctcctcctcgccgccgccgc 16384593 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccg 159 |||||||||||||||||||| Sbjct: 15843203 gctgctcctcctcgccgccg 15843184 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 14548208 ctcctcctcgccgccgccgc 14548189
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tgctcctcctcgccgccgccgc 163 |||||||||||||||||||||| Sbjct: 20916529 tgctcctcctcgccgccgccgc 20916550 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 23650940 ctcctcctcgccgccgccgc 23650959 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cctcctcgccgccgccgcgg 165 |||||||||||||||||||| Sbjct: 23632621 cctcctcgccgccgccgcgg 23632640 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 18564754 ctcctcctcgccgccgccgc 18564773 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ccacctccagatccgccgcc 381 |||||||||||||||||||| Sbjct: 18058699 ccacctccagatccgccgcc 18058680 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 aattcccattccattccccc 59 |||||||||||||||||||| Sbjct: 14614401 aattcccattccattccccc 14614420 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 348 cacccccaccacgaccacctccagatcc 375 |||||||||| |||| |||||||||||| Sbjct: 11674249 cacccccaccccgacgacctccagatcc 11674222 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 4805289 ctcctcctcgccgccgccgc 4805308 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 3701792 ctcctcctcgccgccgccgc 3701811 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cctcctcgccgccgccgcgg 165 |||||||||||||||||||| Sbjct: 3231060 cctcctcgccgccgccgcgg 3231079
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 tcctcgccgccgccgcggtggccctcctcg 177 |||||||||||||||| | ||||||||||| Sbjct: 2071416 tcctcgccgccgccgccgcggccctcctcg 2071387 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccgcccc 257 |||||||||||||||||||| |||| Sbjct: 3901099 ctccttctcctccttctcccccccc 3901123 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 342 cacccccacccccaccacgaccacctcc 369 |||||||||||||||| | ||||||||| Sbjct: 27619682 cacccccacccccacctccaccacctcc 27619709 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 22875998 ctcctcctcgccgccgccgc 22876017 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 16846594 ctcctcctcgccgccgccgc 16846613 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 15912062 ctcctcctcgccgccgccgc 15912081 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 421754 ctcctcctcgccgccgccgc 421735
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 41185981 ccacccccacccccaccaccaccacc 41185956 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 tcctcctcgccgccgccgcgg 165 ||||||||||||||||||||| Sbjct: 41549598 tcctcctcgccgccgccgcgg 41549618 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ccgcccgccgcgtgctgctcctcc 150 |||||||||||| ||||||||||| Sbjct: 41554267 ccgcccgccgcgcgctgctcctcc 41554244 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 40916231 ctcctcctcgccgccgccgc 40916250 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 cctcgccgccgccgcggtgg 168 |||||||||||||||||||| Sbjct: 40364525 cctcgccgccgccgcggtgg 40364506 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 39627647 ctcctcctcgccgccgccgc 39627666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 38998320 ctcctcctcgccgccgccgc 38998339 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 38482894 ctcctcctcgccgccgccgc 38482875 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 ccgccgagcccctccacgccgccg 405 |||||||||||||| ||||||||| Sbjct: 35212465 ccgccgagcccctcaacgccgccg 35212442 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 23884265 ctcctcctcgccgccgccgc 23884246 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 cacccccacccccaccacgaccac 365 |||||||||||||||||| ||||| Sbjct: 9007039 cacccccacccccaccaccaccac 9007016 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 ccgcgtccgccgcctcggcccgcaccgc 338 |||||||||||||| | ||||||||||| Sbjct: 4314674 ccgcgtccgccgccgccgcccgcaccgc 4314701 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ctcaccaccaccgtcgtcaccgtc 308 ||||||||||||||||||| |||| Sbjct: 1445975 ctcaccaccaccgtcgtcatcgtc 1445998 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 147177 ctcctcctcgccgccgccgc 147196
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 2896 ccacccccacccccaccaccaccacc 2871
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 83036 ccacccccacccccaccaccaccacc 83011
>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188928 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 109364 ctccttctcctccttctcccgc 109343
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tgctcctcctcgccgccgccgc 163 |||||||||||||||||||||| Sbjct: 127319 tgctcctcctcgccgccgccgc 127340
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tgctcctcctcgccgccgccgc 163 |||||||||||||||||||||| Sbjct: 44444 tgctcctcctcgccgccgccgc 44465
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 152 cgccgccgccgcggtggccctcctcgcggc 181 |||||||||||| |||||||| |||||||| Sbjct: 39500 cgccgccgccgccgtggccctgctcgcggc 39529
>emb|X60391.1|PVPRP1R P.vulgaris mRNA for prolin-rich protein (PvPRP1) Length = 1111 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 149 ccacccccacccccaccaccaccacc 174
>dbj|AK099501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028I07, full insert sequence Length = 1837 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 274 ccacccccacccccaccaccaccacc 249
>dbj|AK060565.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H08, full insert sequence Length = 2283 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tgctcctcctcgccgccgccgc 163 |||||||||||||||||||||| Sbjct: 91 tgctcctcctcgccgccgccgc 112
>dbj|AK059603.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-E09, full insert sequence Length = 1358 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 152 cgccgccgccgcggtggccctcctcgcggc 181 |||||||||||| |||||||| |||||||| Sbjct: 46 cgccgccgccgccgtggccctgctcgcggc 75
>gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome 14, complete sequence Length = 238300 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 catctccttctcctccttctcc 251 |||||||||||||||||||||| Sbjct: 220030 catctccttctcctccttctcc 220051
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 tcctcgccgccgccgcggtggccctcctcg 177 |||||||||||||||| | ||||||||||| Sbjct: 577247 tcctcgccgccgccgccgcggccctcctcg 577218 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 cctcctcgccgccgccgcggtggcc 170 |||||||||||||||||||| |||| Sbjct: 26632101 cctcctcgccgccgccgcggcggcc 26632125 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 cgtgctgctcctcctcgccgc 157 ||||||||||||||||||||| Sbjct: 22410035 cgtgctgctcctcctcgccgc 22410055 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 1309355 ctgctcctcctcgccgccgcc 1309335 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 26260098 ctcctcctcgccgccgccgc 26260117 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tgctcctcctcgccgccgcc 161 |||||||||||||||||||| Sbjct: 24034220 tgctcctcctcgccgccgcc 24034201 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 21591706 ctcctcctcgccgccgccgc 21591687 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 5070434 ctcctcctcgccgccgccgc 5070415 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 2911024 ctcctcctcgccgccgccgc 2911043 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gctgctcctcctcgccgccgccgc 163 |||||||||||||||||| ||||| Sbjct: 1908051 gctgctcctcctcgccgcggccgc 1908028
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 148 tcctcgccgccgccgcggtggccctcctcg 177 |||||||||||||||| | ||||||||||| Sbjct: 71596 tcctcgccgccgccgccgcggccctcctcg 71625
>gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, complete sequence Length = 192144 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 167396 ccacccccacccccaccaccaccacc 167421
>emb|CT033847.5| Mouse DNA sequence from clone RP24-225N8 on chromosome 17, complete sequence Length = 171164 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 75514 ccacccccacccccaccaccaccacc 75489
>emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on chromosome 2, complete sequence Length = 186386 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 114286 ccacccccacccccaccaccaccacc 114311
>emb|X61045.1|HSNCOL1 Hydra N-COL 1 mRNA for mini-collagen Length = 694 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacc 366 ||||||||||||||||||| |||||| Sbjct: 182 ccacccccacccccaccaccaccacc 207
>gb|AC171241.2| Mus musculus BAC clone RP23-94E5 from chromosome 14, complete sequence Length = 244795 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 catctccttctcctccttctcc 251 |||||||||||||||||||||| Sbjct: 127721 catctccttctcctccttctcc 127742
>gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 178961 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 140008 ctccttctcctccttctcccgc 140029 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 139911 ctccttctcctccttctcccgc 139932 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccgc 254 |||||||||||||||||||||| Sbjct: 139837 ctccttctcctccttctcccgc 139858 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctccc 252 |||||||||||||||||||| Sbjct: 139949 ctccttctcctccttctccc 139968
>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete sequence Length = 151493 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 catctccttctcctccttctcc 251 |||||||||||||||||||||| Sbjct: 29091 catctccttctcctccttctcc 29112
>emb|AL513346.17| Mouse DNA sequence from clone RP23-170L10 on chromosome 15, complete sequence Length = 196912 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 tgctcatctccttctcctccttctcc 251 ||||| |||||||||||||||||||| Sbjct: 50807 tgctcttctccttctcctccttctcc 50832
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 tcctcgccgccgccgcggtggccctcctcg 177 |||||||||||||||| | ||||||||||| Sbjct: 38257 tcctcgccgccgccgccgcggccctcctcg 38228
>ref|XM_476317.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1761 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 902 tgctgcttctcctcgccgccgccgc 878
>ref|XM_470983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1848 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 41 gctcctcctcgccgccgccgc 61
>ref|XM_469149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 37 ctcctcctcgccgccgccgcg 57
>ref|XM_465111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 507 ccgccgcgtcctcctcctcctcgccgccg 535
>ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1383 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 507 ccgccgcgtcctcctcctcctcgccgccg 535
>ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1384 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 508 ccgccgcgtcctcctcctcctcgccgccg 536
>ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1485 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 504 ccgccgcgtcctcctcctcctcgccgccg 532
>ref|NM_197801.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0057L21.17), mRNA Length = 1590 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gccgccgcggtggccctcctc 176 ||||||||||||||||||||| Sbjct: 100 gccgccgcggtggccctcctc 120
>gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, complete sequence Length = 169497 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 36043 tctccttctcctccttctccc 36063
>ref|NM_193059.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cctcgccgccgccgcggtggc 169 ||||||||||||||||||||| Sbjct: 340 cctcgccgccgccgcggtggc 320
>gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, complete sequence Length = 176668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 atctccttctcctccttctcc 251 ||||||||||||||||||||| Sbjct: 27113 atctccttctcctccttctcc 27133
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence Length = 170539 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 103452 tctccttctcctccttctccc 103432 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 103576 tctccttctcctccttctcc 103557 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctccc 252 |||||||||||||||||||| Sbjct: 103566 ctccttctcctccttctccc 103547
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccgcccc 257 |||||||||||||||||||| |||| Sbjct: 98986 ctccttctcctccttctcccccccc 99010
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 344 cccccacccccaccacgaccacctc 368 |||||||||||||||| |||||||| Sbjct: 164370 cccccacccccaccaccaccacctc 164394
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 ccgccgccccgccgagcccctccac 398 ||||||||| ||||||||||||||| Sbjct: 64511 ccgccgcccagccgagcccctccac 64535
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 202 ctcctcctcgccgccgccgcg 222
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcggtggccctcctc 176 |||||||||||||||||||| | ||| |||||| Sbjct: 100224 ctcctcctcgccgccgccgccgcggcgctcctc 100192 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 88401 ctcctcctcgccgccgccgc 88420 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 11175 ctcctcctcgccgccgccgc 11194
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 86245 ctcctcctcgccgccgccgcg 86265
>gb|AC151599.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018H03, complete sequence Length = 93081 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 80253 gctcctcctcgccgccgccgc 80273
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 37772 gctcctcctcgccgccgccgc 37792
>gb|AC007818.8| Drosophila melanogaster clone BACR02M05, complete sequence Length = 188549 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccg 159 ||||||||||||||||||||| Sbjct: 57652 tgctgctcctcctcgccgccg 57632
>gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's Hospital Oakland Research Institute) complete sequence Length = 153441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacga 361 ||||||||||||||||||||| Sbjct: 107290 ccacccccacccccaccacga 107270
>gb|BC028157.1| Homo sapiens polymerase (RNA) II (DNA directed) polypeptide C, 33kDa, transcript variant gamma, mRNA (cDNA clone MGC:40083 IMAGE:5240953), complete cds Length = 1791 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1525 gcttccacccccacccccacc 1505
>ref|XM_953993.1| Neurospora crassa OR74A hypothetical protein (NCU09176.1) partial mRNA Length = 1062 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 785 tctccttctcctccttctccc 765
>gb|BC003159.1| Homo sapiens polymerase (RNA) II (DNA directed) polypeptide C, 33kDa, transcript variant gamma, mRNA (cDNA clone MGC:4212 IMAGE:2957867), complete cds Length = 1794 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1535 gcttccacccccacccccacc 1515
>gb|AY507155.1| Botryotinia fuckeliana aspartic proteinase precursor (ap3) gene, complete cds Length = 2517 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 256 tctccttctcctccttctccc 276
>ref|XM_591527.2| PREDICTED: Bos taurus similar to Huntingtin interacting protein C isoform 1 (LOC513782), mRNA Length = 3232 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tccttctcctccttctcccgc 254 ||||||||||||||||||||| Sbjct: 1172 tccttctcctccttctcccgc 1152
>ref|XM_331567.1| Neurospora crassa OR74A hypothetical protein (NCU09176.1) partial mRNA Length = 1062 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 785 tctccttctcctccttctccc 765
>gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome 18, complete sequence Length = 152497 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccgcccc 257 |||||||||||||||||||| |||| Sbjct: 91689 ctccttctcctccttctccctcccc 91713
>gb|AC158316.3| Mus musculus chromosome 8, clone RP23-189N8, complete sequence Length = 183192 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 100772 tgctgctgctcctcgccgccgccgc 100796
>gb|AC137979.6| Mus musculus chromosome 5, clone RP24-92M6, complete sequence Length = 170969 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 60390 tctccttctcctccttctccc 60370
>gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, complete sequence Length = 177147 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgcccc 257 ||||| ||||||||||||||||||| Sbjct: 17306 ctcctcctcctccttctcccgcccc 17282
>gb|AC125274.12| Mus musculus chromosome 15, clone RP24-157F9, complete sequence Length = 188060 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 21118 tctccttctcctccttctccc 21098 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 21242 tctccttctcctccttctcc 21223 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctccttctcctccttctccc 252 |||||||||||||||||||| Sbjct: 21232 ctccttctcctccttctccc 21213
>gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, complete sequence Length = 143726 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 90572 tctccttctcctccttctccc 90592
>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence Length = 264135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 180348 gcttccacccccacccccacc 180368
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cgagcccctccacgccgccgt 406 ||||||||||||||||||||| Sbjct: 7634 cgagcccctccacgccgccgt 7654
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 95986 ctcctcctcgccgccgccgcg 96006
>ref|XM_534809.2| PREDICTED: Canis familiaris similar to huntington yeast partner C (LOC477615), mRNA Length = 3455 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tccttctcctccttctcccgc 254 ||||||||||||||||||||| Sbjct: 1388 tccttctcctccttctcccgc 1368
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 cttccacccccacccccacca 358 ||||||||||||||||||||| Sbjct: 60833 cttccacccccacccccacca 60853
>gb|AC132093.3| Mus musculus BAC clone RP24-506H13 from chromosome 10, complete sequence Length = 148364 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 73298 tctccttctcctccttctccc 73318
>gb|AC127564.4| Mus musculus BAC clone RP24-290E2 from chromosome 5, complete sequence Length = 157220 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 67605 tctccttctcctccttctccc 67585
>emb|AJ275962.1|HAN275962 Helianthus annuus mRNA for basic 2S albumins BA1 and BA2 Length = 1006 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 tcaccaccaccgtcgtcaccg 306 ||||||||||||||||||||| Sbjct: 443 tcaccaccaccgtcgtcaccg 463
>gb|AC004382.1|HUAC004382 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-152E5, complete sequence Length = 217873 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 121543 gcttccacccccacccccacc 121523
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence Length = 212687 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 atctccttctcctccttctcc 251 ||||||||||||||||||||| Sbjct: 63356 atctccttctcctccttctcc 63336
>gb|AF099918.2| Caenorhabditis elegans fosmid H05C05, complete sequence Length = 25520 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ccaccacgaccacctccagat 373 ||||||||||||||||||||| Sbjct: 14661 ccaccacgaccacctccagat 14641
>gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 241078 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 123050 gcttccacccccacccccacc 123030
>gb|BC096433.1| Mus musculus inhibitor of growth family, member 2, mRNA (cDNA clone MGC:106149 IMAGE:6310342), complete cds Length = 1490 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 421 tgctgctgctcctcgccgccgccgc 397
>gb|BC050003.1| Mus musculus inhibitor of growth family, member 2, mRNA (cDNA clone IMAGE:6515125), partial cds Length = 1262 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 386 tgctgctgctcctcgccgccgccgc 362
>emb|AL136119.16| Human DNA sequence from clone RP11-113F5 on chromosome 10, complete sequence Length = 91580 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 cacccccacccccaccacgaccacc 366 |||||||||||||||||| |||||| Sbjct: 54255 cacccccacccccaccactaccacc 54279
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 18071 ctgctcctcctcgccgccgcc 18051
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 147892 gctcctcctcgccgccgccgc 147912
>emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16, complete sequence Length = 155702 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 caccgcttccacccccacccccacc 357 |||||||||||| |||||||||||| Sbjct: 39918 caccgcttccacacccacccccacc 39942
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 25008 ctcctcctcgccgccgccgcg 24988
>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence Length = 203826 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 ccacccccacccccaccacgaccac 365 ||||||||||||||||||| ||||| Sbjct: 75842 ccacccccacccccaccactaccac 75818
>emb|AL645702.14| Mouse DNA sequence from clone RP23-163J17 on chromosome 1 Contains a ribosomal protein S2 (Rps2) pseudogene, a tigger transposable element derived 1 (TIGD1) pseudogene and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 205103 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 ctccttctcctccttctcccgcccc 257 ||||| ||||||||||||||||||| Sbjct: 163786 ctcctcctcctccttctcccgcccc 163762
>emb|AL844139.4| Mouse DNA sequence from clone RP23-21G2 on chromosome 4, complete sequence Length = 14860 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 8995 tctccttctcctccttctccc 9015
>emb|CR615834.1| full-length cDNA clone CS0DL001YB02 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 504 gcttccacccccacccccacc 484
>gb|AE005746.1| Caulobacter crescentus CB15 section 72 of 359 of the complete genome Length = 10948 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ccgccgcctcggcccgcaccg 337 ||||||||||||||||||||| Sbjct: 2875 ccgccgcctcggcccgcaccg 2855
>emb|CR620622.1| full-length cDNA clone CS0DC001YH07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1709 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1488 gcttccacccccacccccacc 1468
>emb|CR615542.1| full-length cDNA clone CS0DL008YD07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1725 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1515 gcttccacccccacccccacc 1495
>emb|CR600374.1| full-length cDNA clone CS0DK004YF24 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1711 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1515 gcttccacccccacccccacc 1495
>emb|CR600258.1| full-length cDNA clone CS0DB004YJ07 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1693 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1506 gcttccacccccacccccacc 1486
>emb|CR599625.1| full-length cDNA clone CS0DI013YG04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1744 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1533 gcttccacccccacccccacc 1513
>emb|CR594917.1| full-length cDNA clone CS0DJ014YL13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 845 gcttccacccccacccccacc 825
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcggtggccctcctc 176 |||||||||||||||||||| | ||| |||||| Sbjct: 115399 ctcctcctcgccgccgccgccgcggcgctcctc 115431 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 127222 ctcctcctcgccgccgccgc 127203
>ref|NM_032940.2| Homo sapiens polymerase (RNA) II (DNA directed) polypeptide C, 33kDa (POLR2C), mRNA Length = 1822 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1563 gcttccacccccacccccacc 1543
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gccgccgcggtggccctcctc 176 ||||||||||||||||||||| Sbjct: 60767 gccgccgcggtggccctcctc 60747
>dbj|AK137666.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930017J12 product:unclassifiable, full insert sequence Length = 4604 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccg 253 ||||||||||||||||||||| Sbjct: 2711 ctccttctcctccttctcccg 2731
>gb|AF329084.1|AF329084 Diplonema papillatum spliced leader RNA, complete sequence; and 5S ribosomal RNA genes, partial sequence Length = 814 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 124 tctccttctcctccttctccc 144 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 454 tctccttctcctccttctcc 473 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 439 tctccttctcctccttctcc 458 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 424 tctccttctcctccttctcc 443
>gb|AY007786.1| Diplonema papillatum spliced leader RNA and 5S ribosomal RNA genes, complete sequence Length = 643 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 539 tctccttctcctccttctccc 559
>gb|AC122735.18| Mus musculus chromosome 3, clone RP23-215I1, complete sequence Length = 182999 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 32259 gcttccacccccacccccacc 32239
>dbj|AK012716.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810011M06 product:inhibitor of growth family, member 1-like, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 439 tgctgctgctcctcgccgccgccgc 415
>ref|NM_065242.3| Caenorhabditis elegans H05C05.1b (H05C05.1) mRNA, complete cds Length = 854 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ccaccacgaccacctccagat 373 ||||||||||||||||||||| Sbjct: 307 ccaccacgaccacctccagat 287
>ref|NM_181975.3| Caenorhabditis elegans H05C05.1a (H05C05.1) mRNA, complete cds Length = 2612 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ccaccacgaccacctccagat 373 ||||||||||||||||||||| Sbjct: 1822 ccaccacgaccacctccagat 1802
>dbj|AK048800.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230071A14 product:inhibitor of growth family, member 1-like, full insert sequence Length = 2643 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 437 tgctgctgctcctcgccgccgccgc 413
>gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212543 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 161464 tctccttctcctccttctccc 161484
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 19373755 ctcctcctcgccgccgccgcg 19373735 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 10897419 gctcctcctcgccgccgccgc 10897439 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 caccgcttccacccccacccccacc 357 |||||||||||| |||||||||||| Sbjct: 5339204 caccgcttccacacccacccccacc 5339228 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 403015 gctcctcctcgccgccgccgc 402995 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cgccgcctcggcccgcaccg 337 |||||||||||||||||||| Sbjct: 23468406 cgccgcctcggcccgcaccg 23468387 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 18415827 ctcctcctcgccgccgccgc 18415808
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccgccgc 163 ||||||| | || |||||||||||||||||||| Sbjct: 27443268 ccgccgcctcctcctcctcctcgccgccgccgc 27443236 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 3953403 tgctgcttctcctcgccgccgccgc 3953379 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 28079779 ctcctcctcgccgccgccgc 28079760 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 22452323 ctcctcctcgccgccgccgc 22452304 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 20755727 ctcctcctcgccgccgccgc 20755746 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 caccaccaccgtcgtcaccg 306 |||||||||||||||||||| Sbjct: 16802438 caccaccaccgtcgtcaccg 16802419 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 9294056 ctcctcctcgccgccgccgc 9294037 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 5028953 ctcctcctcgccgccgccgc 5028972
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 20325718 ctcctcctcgccgccgccgcg 20325738 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 11594367 ccgccgcgtcctcctcctcctcgccgccg 11594339 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 35699902 ctcctcctcgccgccgccgc 35699921 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 3170757 ctcctcctcgccgccgccgc 3170738 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tgctcctcctcgccgccgcc 161 |||||||||||||||||||| Sbjct: 2141409 tgctcctcctcgccgccgcc 2141390
>gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, region 98B-98B, BAC clone BACR10J03, complete sequence Length = 193245 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccg 159 ||||||||||||||||||||| Sbjct: 375 tgctgctcctcctcgccgccg 355
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12, complete sequence Length = 122766 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 484 gctcctcctcgccgccgccgc 504
>gb|AC009052.8| Homo sapiens chromosome 16 clone RP11-250E14, complete sequence Length = 200557 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 169485 gcttccacccccacccccacc 169465
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cgagcccctccacgccgccgt 406 ||||||||||||||||||||| Sbjct: 123871 cgagcccctccacgccgccgt 123891
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 tcctcctcgccgccgccgcgg 165 ||||||||||||||||||||| Sbjct: 105891 tcctcctcgccgccgccgcgg 105911 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ccgcccgccgcgtgctgctcctcc 150 |||||||||||| ||||||||||| Sbjct: 110560 ccgcccgccgcgcgctgctcctcc 110537
>gb|AC068665.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-426K16, complete sequence Length = 205937 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 100225 tctccttctcctccttctccc 100245
>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188527 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 46457 tctccttctcctccttctccc 46477
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ctcctcgccgccgccgcggtggccc 171 ||||||||||||||||||| ||||| Sbjct: 1500277 ctcctcgccgccgccgcggcggccc 1500301 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccg 162 |||||||||| ||||||||||||| Sbjct: 3818720 tgctgctcctgctcgccgccgccg 3818697
>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166071 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 218 gcagacgctgctcatctccttctcc 242 ||||||||||| ||||||||||||| Sbjct: 68627 gcagacgctgcacatctccttctcc 68651
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 59279 tgctgcttctcctcgccgccgccgc 59255
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccgccgc 163 ||||||| | || |||||||||||||||||||| Sbjct: 12826 ccgccgcctcctcctcctcctcgccgccgccgc 12794
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccgccgc 163 ||||||| | || |||||||||||||||||||| Sbjct: 62337 ccgccgcctcctcctcctcctcgccgccgccgc 62305
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 tcctcctcgccgccgccgcgg 165 ||||||||||||||||||||| Sbjct: 117797 tcctcctcgccgccgccgcgg 117817 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ccgcccgccgcgtgctgctcctcc 150 |||||||||||| ||||||||||| Sbjct: 122466 ccgcccgccgcgcgctgctcctcc 122443
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 40656 ccgccgcgtcctcctcctcctcgccgccg 40628
>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0006J22 Length = 145271 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 76523 ctcctcctcgccgccgccgcg 76543
>dbj|AK122005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110O14, full insert sequence Length = 1158 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 349 ctgctcctcctcgccgccgcc 369
>dbj|AK111663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156F08, full insert sequence Length = 2751 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccgccgc 163 ||||||| | || |||||||||||||||||||| Sbjct: 2383 ccgccgcctcctcctcctcctcgccgccgccgc 2351
>emb|AJ427982.1|OSA427982 Oryza sativa partial HAK13 gene for putative potasium transporter Length = 5989 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 ccgccgcgtgctgctcctcctcgccgccgccgc 163 ||||||| | || |||||||||||||||||||| Sbjct: 5894 ccgccgcctcctcctcctcctcgccgccgccgc 5862
>dbj|AK111322.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D06, full insert sequence Length = 692 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 58 ctcctcctcgccgccgccgcg 78
>ref|XM_312276.2| Anopheles gambiae str. PEST ENSANGP00000020997 (ENSANGG00000018508), partial mRNA Length = 516 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 477 tctccttctcctccttctccc 497
>dbj|AK105611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B05, full insert sequence Length = 1800 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cgagcccctccacgccgccgt 406 ||||||||||||||||||||| Sbjct: 425 cgagcccctccacgccgccgt 445
>dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C10, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 507 ccgccgcgtcctcctcctcctcgccgccg 535
>dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G12, full insert sequence Length = 1377 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 507 ccgccgcgtcctcctcctcctcgccgccg 535
>dbj|AK103645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135B09, full insert sequence Length = 1948 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 921 tgctgcttctcctcgccgccgccgc 945
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 140670 tctccttctcctccttctccc 140650
>dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A16, full insert sequence Length = 1484 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 503 ccgccgcgtcctcctcctcctcgccgccg 531
>dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F17, full insert sequence Length = 1384 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 ccgccgcgtgctgctcctcctcgccgccg 159 ||||||||| || |||||||||||||||| Sbjct: 508 ccgccgcgtcctcctcctcctcgccgccg 536
>gb|AC102243.14| Mus musculus chromosome 18, clone RP24-141G8, complete sequence Length = 181246 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 102732 tctccttctcctccttctccc 102752
>gb|AY109040.1| Zea mays PCO108674 mRNA sequence Length = 930 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 ccaccgtcgtcaccgtcctccgcgtccgccgcctcgg 328 |||| ||| |||||||| ||||||| ||||||||||| Sbjct: 271 ccacggtcatcaccgtcttccgcgtgcgccgcctcgg 307
>gb|AY104561.1| Zea mays PCO100178 mRNA sequence Length = 1105 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gctgctcctcctcgccgccgc 160 ||||||||||||||||||||| Sbjct: 332 gctgctcctcctcgccgccgc 352
>gb|AY103792.1| Zea mays PCO149739 mRNA sequence Length = 2093 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 383 ctgctcctcctcgccgccgcc 403
>gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 100 of 118 of the complete sequence Length = 231486 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 tgctgctcctcctcgccgccg 159 ||||||||||||||||||||| Sbjct: 30053 tgctgctcctcctcgccgccg 30033
>emb|AL132855.4|CNS01DTR Human chromosome 14 DNA sequence BAC C-2201G16 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157910 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 ttctcctccttctcccgccccaacc 261 |||||||||||| |||||||||||| Sbjct: 145934 ttctcctccttcccccgccccaacc 145958
>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196311 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 ttctcctccttctcccgccccaacc 261 |||||||||||| |||||||||||| Sbjct: 9213 ttctcctccttcccccgccccaacc 9237
>gb|AC120410.11| Mus musculus chromosome 18, clone RP24-441C8, complete sequence Length = 178807 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ctcatctccttctcctccttc 248 ||||||||||||||||||||| Sbjct: 76136 ctcatctccttctcctccttc 76156
>dbj|AK116104.1| Ciona intestinalis cDNA, clone:citb009o23, full insert sequence Length = 1053 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 ccgcttccacccccacccccaccac 359 ||||| ||||||||||||||||||| Sbjct: 626 ccgctaccacccccacccccaccac 650
>gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, complete sequence Length = 121286 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cctcggcccgcaccgcttcca 343 ||||||||||||||||||||| Sbjct: 1505 cctcggcccgcaccgcttcca 1485
>gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, complete sequence Length = 193105 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 tgctgctcctcctcgccgccgccgc 163 ||||||| ||||||||||||||||| Sbjct: 191370 tgctgctgctcctcgccgccgccgc 191394
>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23, complete sequence Length = 115972 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 87674 gctcctcctcgccgccgccgc 87654
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 cctcctcgccgccgccgcggtggcc 170 |||||||||||||||||||| |||| Sbjct: 67193 cctcctcgccgccgccgcggcggcc 67169
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cgtgctgctcctcctcgccgc 157 ||||||||||||||||||||| Sbjct: 25844 cgtgctgctcctcctcgccgc 25824
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gctcctcctcgccgccgccgc 163 ||||||||||||||||||||| Sbjct: 41767 gctcctcctcgccgccgccgc 41747
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 ctgctcctcctcgccgccgcc 161 ||||||||||||||||||||| Sbjct: 119814 ctgctcctcctcgccgccgcc 119834
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 cctcctcgccgccgccgcggtggcc 170 |||||||||||||||||||| |||| Sbjct: 95047 cctcctcgccgccgccgcggcggcc 95023
>emb|AL935121.9| Mouse DNA sequence from clone RP23-432M14 on chromosome 2, complete sequence Length = 106940 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctcccg 253 ||||||||||||||||||||| Sbjct: 65434 ctccttctcctccttctcccg 65454
>gb|AC132228.3| Mus musculus BAC clone RP24-480G11 from 6, complete sequence Length = 180203 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 159247 gcttccacccccacccccacc 159267
>emb|AL929045.7| Zebrafish DNA sequence from clone CH211-159J13, complete sequence Length = 167619 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 tccacccccacccccaccacgaccacctc 368 |||||| ||||||||||||| |||||||| Sbjct: 5535 tccaccaccacccccaccaccaccacctc 5507
>gb|AC002037.1|AC002037 Human Chromosome 11 Overlapping Cosmids cSRL72g7 and cSRL140b8, complete sequence Length = 53897 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 cacccccacccccaccacgac 362 ||||||||||||||||||||| Sbjct: 32084 cacccccacccccaccacgac 32104
>gb|U77656.1|OSU77656 Oryza sativa pathogenesis-related thaumatin-like protein mRNA, complete cds Length = 882 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgcg 164 ||||||||||||||||||||| Sbjct: 16 ctcctcctcgccgccgccgcg 36
>gb|U73648.1|HSU73648 Human chromosome 11 72g7 cosmid, complete sequence Length = 36565 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 cacccccacccccaccacgac 362 ||||||||||||||||||||| Sbjct: 14757 cacccccacccccaccacgac 14777
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 cacccccacccccaccacgaccacc 366 |||| |||||||||||||||||||| Sbjct: 73413 caccaccacccccaccacgaccacc 73437
>gb|AC161495.3| Mus musculus chromosome 5, clone RP23-393A24, complete sequence Length = 194459 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctccc 252 ||||||||||||||||||||| Sbjct: 3738 tctccttctcctccttctccc 3718
>emb|AL590429.9| Mouse DNA sequence from clone RP23-462O16 on chromosome 2, complete sequence Length = 190669 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 atctccttctcctccttctcc 251 ||||||||||||||||||||| Sbjct: 105166 atctccttctcctccttctcc 105146
>emb|AL731826.12| Mouse DNA sequence from clone RP23-123O12 on chromosome 2, complete sequence Length = 194661 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 ttccacccccacccccaccac 359 ||||||||||||||||||||| Sbjct: 89166 ttccacccccacccccaccac 89146 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 174725 tctccttctcctccttctcc 174706
>gb|J05448.1|HUMRPOLAA Human RNA polymerase subunit hRPB 33, mRNA Length = 1766 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcttccacccccacccccacc 357 ||||||||||||||||||||| Sbjct: 1522 gcttccacccccacccccacc 1502
>dbj|AP003117.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1958F4 Length = 152176 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tgctcatctccttctcctcct 246 ||||||||||||||||||||| Sbjct: 18106 tgctcatctccttctcctcct 18126
>dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1255G1 Length = 171035 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tgctcatctccttctcctcct 246 ||||||||||||||||||||| Sbjct: 114774 tgctcatctccttctcctcct 114794
>gb|AC115067.7| Mus musculus chromosome 5, clone RP24-404B4, complete sequence Length = 163303 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 64443 tctccttctcctccttctcc 64462
>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence Length = 198559 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 58438 tctccttctcctccttctcc 58419
>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence Length = 137391 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 37707 tctccttctcctccttctcc 37688
>gb|AC108432.14| Mus musculus chromosome 7, clone RP23-170D4, complete sequence Length = 183180 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 151834 tctccttctcctccttctcc 151815
>gb|AC116896.7| Mus musculus chromosome 8, clone RP24-531D19, complete sequence Length = 163072 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 118602 tctccttctcctccttctcc 118583
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccacccccacccccaccacgaccacctc 368 ||||||||||||||||| | |||||||| Sbjct: 100741 ccacccccacccccacccccaccacctc 100768
>gb|AC119279.8| Mus musculus chromosome 8, clone RP24-460J16, complete sequence Length = 139356 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 51501 tctccttctcctccttctcc 51520 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 51362 tctccttctcctccttctcc 51381
>gb|AC109200.13| Mus musculus chromosome 8, clone RP23-26G21, complete sequence Length = 162734 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 54832 tctccttctcctccttctcc 54813
>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence Length = 206094 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 191749 tctccttctcctccttctcc 191730
>gb|AC118200.8| Mus musculus chromosome 5, clone RP23-330E5, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 atctccttctcctccttctc 250 |||||||||||||||||||| Sbjct: 151289 atctccttctcctccttctc 151308
>gb|AC102908.11| Mus musculus chromosome 16, clone RP24-288K2, complete sequence Length = 174803 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 137099 tctccttctcctccttctcc 137080
>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence Length = 236139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 98302 tctccttctcctccttctcc 98283
>gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 22476 tctccttctcctccttctcc 22457
>gb|AC137855.14| Mus musculus chromosome 16, clone RP24-444E8, complete sequence Length = 196783 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 191397 tctccttctcctccttctcc 191416
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 ctcatctccttctcctccttctcc 251 |||||||||||||||| ||||||| Sbjct: 110733 ctcatctccttctccttcttctcc 110756
>gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, complete sequence Length = 200303 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 82770 tctccttctcctccttctcc 82789
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ctgctcatctccttctcctccttc 248 |||||| ||||||||||||||||| Sbjct: 179939 ctgctcttctccttctcctccttc 179962
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctccttctcctccttctccc 252 |||||||||||||||||||| Sbjct: 101031 ctccttctcctccttctccc 101050
>gb|AC139845.19| Mus musculus chromosome 15, clone RP23-310D3, complete sequence Length = 202913 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 145140 tctccttctcctccttctcc 145159
>gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, complete sequence Length = 164098 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 122533 tctccttctcctccttctcc 122514
>gb|AC107774.8| Mus musculus chromosome 5, clone RP23-99A9, complete sequence Length = 227044 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 87375 tctccttctcctccttctcc 87394
>gb|AC153645.4| Mus musculus BAC clone RP24-534E8 from chromosome 13, complete sequence Length = 182805 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 100474 tctccttctcctccttctcc 100493
>gb|AC167816.4| Mus musculus BAC clone RP23-317F20 from chromosome 9, complete sequence Length = 198915 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 158712 tctccttctcctccttctcc 158693
>gb|AC103368.7| Mus musculus chromosome 18, clone RP24-131L2, complete sequence Length = 160855 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 18863 tctccttctcctccttctcc 18844
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctccttctcctccttctcc 251 |||||||||||||||||||| Sbjct: 91947 tctccttctcctccttctcc 91928
>ref|XM_550409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 ccgcgtccgccgcctcggcccgcaccgc 338 |||||||||||||| | ||||||||||| Sbjct: 161 ccgcgtccgccgccgccgcccgcaccgc 134
>ref|XM_549819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 877 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcctcctcgccgccgccgc 163 |||||||||||||||||||| Sbjct: 78 ctcctcctcgccgccgccgc 97 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,707,048 Number of Sequences: 3902068 Number of extensions: 4707048 Number of successful extensions: 246574 Number of sequences better than 10.0: 1460 Number of HSP's better than 10.0 without gapping: 1511 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 221059 Number of HSP's gapped (non-prelim): 25501 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
