ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 63 3e-10
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 60 2e-09
3APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 40 0.002
4APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 39 0.006
5K0084_HUMAN (Q14699) Protein KIAA0084 (HA2022) (Fragment) 29 4.4
6COQ8_CAEEL (Q18486) Ubiquinone biosynthesis protein coq-8 29 4.4
7ZN278_HUMAN (Q9HBE1) Zinc finger protein 278 (POZ-, AT hook-, an... 29 5.8
8IE18_PRVIF (P11675) Immediate-early protein IE180 29 5.8
9AUR1_YEAST (P36107) Aureobasidin A resistance protein 28 7.6
10SYK_PASMU (P57822) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 28 9.9
11SRF_HUMAN (P11831) Serum response factor (SRF) 28 9.9
12AUR1_CANAL (O13332) Aureobasidin A resistance protein homolog 28 9.9

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +3

Query: 219 YRALFNFGDSLADAGNLIANGVPDILATARLPYGQTYFGKPTGRCSDGRLVVDHLAQEFG 398
           + A+FNFGDS +D G   A   P        PYG+T+F + TGR SDGRL++D +A+ F 
Sbjct: 32  FPAIFNFGDSNSDTGGKAAAFYP-----LNPPYGETFFHRSTGRYSDGRLIIDFIAESFN 86

Query: 399 LPLLPP 416
           LP L P
Sbjct: 87  LPYLSP 92



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 30/64 (46%), Positives = 39/64 (60%)
 Frame = +3

Query: 219 YRALFNFGDSLADAGNLIANGVPDILATARLPYGQTYFGKPTGRCSDGRLVVDHLAQEFG 398
           + A+FNFGDS +D G L A         A  P+G ++FG P GR  DGRLV+D +A+  G
Sbjct: 28  FPAIFNFGDSNSDTGGLSA-----AFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82

Query: 399 LPLL 410
           LP L
Sbjct: 83  LPYL 86



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 225 ALFNFGDSLADAGNLIANGVPDILATARLPYGQTY-FGKPTGRCSDGRLVVDHLAQEFGL 401
           A+F FGDS+ D GN   N +   L     PYG  +  G  TGR S+GR+  D++++  G+
Sbjct: 125 AVFFFGDSIFDTGN--NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182

Query: 402 PLLPP 416
             + P
Sbjct: 183 KEIVP 187



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 225 ALFNFGDSLADAGNLIANGVPDILATARLPYGQTY-FGKPTGRCSDGRLVVDHLAQEFGL 401
           A+F FGDS+ D GN   N +   + +   PYG  + F   TGR S+G +  D+LA+  G+
Sbjct: 204 AVFFFGDSVFDTGN--NNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261

Query: 402 PLLPP 416
             + P
Sbjct: 262 KEIVP 266



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>K0084_HUMAN (Q14699) Protein KIAA0084 (HA2022) (Fragment)|
          Length = 648

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 356 GAASGGLAEVGLAVGQPGGGEDVRDAVGDEVPGVG 252
           G AS   A VG+  G    GED RD   +EV  +G
Sbjct: 609 GPASHSRALVGICTGHSNPGEDARDGDAEEVRELG 643



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>COQ8_CAEEL (Q18486) Ubiquinone biosynthesis protein coq-8|
          Length = 755

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +3

Query: 222 RALFNFGDSLADAGNLIANGVPDILATARLPYGQTYFGKPTGRC-SDGRLVVDHLAQEF 395
           RA+  F + +AD  ++    V D L+++R+   +  +GKP   C  + ++V D++A +F
Sbjct: 512 RAMKKFRELIADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKF 570



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>ZN278_HUMAN (Q9HBE1) Zinc finger protein 278 (POZ-, AT hook-, and zinc|
           finger-containing protein) (Zinc finger sarcoma gene
           protein) (BTB-POZ domain zinc finger transcription
           factor) (Protein kinase A RI-alpha subunit-associated
           protein) (Zinc finger and
          Length = 687

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -2

Query: 356 GAASGGLAEVGLAVGQPGGG 297
           GAA GG A+VG A   PGGG
Sbjct: 78  GAADGGPADVGGATAAPGGG 97



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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 368  EAAVGAASGGLAEVGLAVGQPGGGEDVRDAVGDEVPG 258
            E +V AA+GG  E     G  G GED  D+   E+ G
Sbjct: 1388 ETSVRAAAGGAVETHRPSGARGPGEDGEDSAAVEIVG 1424



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>AUR1_YEAST (P36107) Aureobasidin A resistance protein|
          Length = 401

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 237 FGDSLADAGNLIANGVPDILATARLPYGQTYFGKP 341
           +GD+L+D      N   DILA   LPYG  +FG P
Sbjct: 129 YGDNLSDILATSTNSFLDILAW--LPYGLFHFGAP 161



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>SYK_PASMU (P57822) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 501

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 219 YRALFNFGDSLADAGNLIANGVPDILATARLPYGQTY--FGKPTGR 350
           Y+A  ++ D + +   L+     DIL T  +PYG+    FGKP  R
Sbjct: 276 YQAYADYHDLMDNTEELLRKLAMDILGTTIVPYGELEFDFGKPFER 321



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>SRF_HUMAN (P11831) Serum response factor (SRF)|
          Length = 508

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -2

Query: 356 GAASGGLAEVGLAVGQPGGGEDVRDAVGDEVPGVG 252
           G+A GG        G+PGGG   R A G  VPG G
Sbjct: 15  GSALGGSLN-RTPTGRPGGGGGTRGANGGRVPGNG 48



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>AUR1_CANAL (O13332) Aureobasidin A resistance protein homolog|
          Length = 471

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 237 FGDSLADAGNLIANGVPDILATARLPYGQTYFGKP 341
           +GD+L++    I  GV DILA   LPYG  +F  P
Sbjct: 142 YGDNLSNVLATITTGVLDILAW--LPYGIIHFSFP 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,008,245
Number of Sequences: 219361
Number of extensions: 515877
Number of successful extensions: 2187
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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