ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476984.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
2dbj|AK069901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 289 4e-75
4dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic D... 289 4e-75
5dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic D... 289 4e-75
6gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence 46 0.10
7gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 46 0.10
8gb|AC153488.1| Tribolium castaneum BAC T.cast_C24H10 (Clemson U... 44 0.40
9gb|AC152927.1| Tribolium castaneum BAC T.cast_C19N19 (Clemson U... 44 0.40
10emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 44 0.40
11ref|NM_001039430.1| Tribolium castaneum abdominal-B (abd-B), mRNA 44 0.40
12gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmid... 44 0.40
13gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the... 44 0.40
14gb|AF227923.1|AF227923 Tribolium castaneum abdominal-B mRNA, com... 44 0.40
15emb|X75816.1|SCPCM1 S. cerevisiae PCM1/AGM1 gene 44 0.40
16emb|X90459.1|SCDNASIMP S.cerevisiae DNA for SOM1 gene 44 0.40
17gb|AC101752.14| Mus musculus chromosome 1, clone RP24-344C18, co... 44 0.40
18gb|DQ331570.1| Synthetic construct Saccharomyces cerevisiae clon... 44 0.40
19gb|AF002133.1|AF002133 Mycobacterium avium strain GIR10 transcri... 44 0.40
20gb|M30952.1|ORARGITX Orangutan 28S ribosomal RNA gene fragment 44 0.40
21gb|M18097.1|YSCPRB1 Yeast (S.cerevisiae) protease B (PRB1) gene,... 44 0.40
22ref|NM_188790.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
23gb|BC005064.1| Homo sapiens hypothetical protein MGC12972, mRNA ... 42 1.6
24gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.6
25gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 42 1.6
26gb|BC028146.1| Homo sapiens hypothetical protein MGC12972, mRNA ... 42 1.6
27gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosom... 42 1.6
28emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chr... 42 1.6
29emb|X68285.1|HSRNAGLK H.sapiens mRNA for glycerol kinase 42 1.6
30gb|AE008721.1| Salmonella typhimurium LT2, section 29 of 220 of ... 42 1.6
31emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
32emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
33gb|BC093008.1| Homo sapiens hypothetical protein MGC12972, mRNA ... 42 1.6
34emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella ty... 42 1.6
35dbj|AK094091.1| Homo sapiens cDNA FLJ36772 fis, clone ADRGL2000064 42 1.6
36gb|AF320622.1|AF320622 Homo sapiens FKSG24 (FKSG24) mRNA, comple... 42 1.6
37gb|AF416712.1|AF416712 Homo sapiens clone 1 unknown mRNA 42 1.6
38gb|S76043.1| fimA=SEF21 type 1 structural fimbrin [Salmonella en... 42 1.6
39gb|AC068499.1|AC068499 Homo sapiens chromosome 19, cosmid R26574... 42 1.6
40gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.6
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42gb|L19338.1|STYFIMCLUS Salmonella typhimurium fimbrial gene clus... 42 1.6
43ref|NM_032683.1| Homo sapiens hypothetical protein MGC12972 (FKS... 42 1.6
44dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.6
45dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
46emb|X65168.1|STFIMAG S.typhi fimA gene for fimbrin type 1 42 1.6
47dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
48gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 42 1.6
49gb|AF083912.1|AF083912 Salmonella enterica VI strain RKS2995 maj... 42 1.6
50gb|AF083911.1|AF083911 Salmonella enterica II strain RKS2985 maj... 42 1.6
51gb|AF083905.1|AF083905 Salmonella enterica VI strain RKS3057 maj... 42 1.6
52gb|AF083900.1|AF083900 Salmonella enterica serovar Typhimurium m... 42 1.6
53gb|AF083899.1|AF083899 Salmonella enterica serovar Typhi major p... 42 1.6
54gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 42 1.6
55emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide... 42 1.6
56gb|M18283.1|STYFIMB S.typhimurium fimbrial subunit type 1 gene, ... 42 1.6
57ref|XM_469952.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
58ref|XM_472283.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
59gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
60gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
61gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 40 6.2
62gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.2
63gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
64ref|XM_799829.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.2
65ref|XM_801423.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.2
66emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete ch... 40 6.2
67gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.2
68emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chr... 40 6.2
69emb|AL031123.14|HS80N2 Human DNA sequence from clone RP1-80N2 on... 40 6.2
70emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.2
71emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 6.2
72emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 6.2
73emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
74dbj|AK094178.1| Homo sapiens cDNA FLJ36859 fis, clone ASTRO2015214 40 6.2
75dbj|AK093853.1| Homo sapiens cDNA FLJ36534 fis, clone TRACH2004499 40 6.2
76gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 6.2
77ref|NM_022114.2| Homo sapiens PR domain containing 16 (PRDM16), ... 40 6.2
78ref|NM_199454.1| Homo sapiens PR domain containing 16 (PRDM16), ... 40 6.2
79ref|XM_688270.1| PREDICTED: Danio rerio similar to SMT3 isopepti... 40 6.2
80dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
81dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
82dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
83dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
84dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
85ref|NM_204104.1| Gallus gallus retina and anterior neural fold h... 40 6.2
86emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 i... 40 6.2
87dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
88dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
89gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, co... 40 6.2
90gb|AF080002.1|AF080002 Heliobacillus mobilis exopolyphosphatase ... 40 6.2
91gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.2
92emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
93gb|U18061.1|CGU18061 Colletotrichum gloeosporioides CAP20 (cap20... 40 6.2
94gb|AF420600.1| Gallus gallus homeobox transcription factor RAX1 ... 40 6.2
95dbj|AB020318.1| Gallus gallus mRNA for homeobox protein cRax/Rax... 40 6.2
96dbj|AB051462.2| Homo sapiens mRNA for KIAA1675 protein, partial cds 40 6.2 
>ref|XM_476984.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1999

 Score =  317 bits (160), Expect = 2e-83
 Identities = 262/296 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 gacggcgcgaccttctcctacgggacggcggggttccgcgccgacgggagcaccatggcc 214
           ||||||||||  ||||| ||||||||||||||||||||||| || |||  | |||||| |
Sbjct: 144 gacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggc 203

                                                                       
Query: 215 cccgcggtgtgccgcgccgggatcgtggcggcgctgcgctccgtgaagctgggcggcgcc 274
           ||||||||||||||||||||| | |||||||||||||| || |  |||||||||||||||
Sbjct: 204 cccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgcc 263

                                                                       
Query: 275 gccgtcgggctggtcatcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatc 334
           ||||| ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||
Sbjct: 264 gccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatc 323

                                                                       
Query: 335 gtggacgccgacggcggcatgatgtcgcaggcctgggagcccttctccgacgccctcgcc 394
           || ||||| |||||||| ||| ||||||||| ||||||||| ||| ||||||| ||||||
Sbjct: 324 gtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgcc 383

                                                                   
Query: 395 aatgcccccacccccgacgccctcctgcagctggtgcttcagtttgcaaaggatga 450
           |||||||||| ||||||||||||||| ||| | ||||||||||||||||| |||||
Sbjct: 384 aatgcccccaaccccgacgccctcctccagatagtgcttcagtttgcaaaagatga 439
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>dbj|AK069901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034C14, full
           insert sequence
          Length = 1999

 Score =  317 bits (160), Expect = 2e-83
 Identities = 262/296 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 gacggcgcgaccttctcctacgggacggcggggttccgcgccgacgggagcaccatggcc 214
           ||||||||||  ||||| ||||||||||||||||||||||| || |||  | |||||| |
Sbjct: 144 gacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggc 203

                                                                       
Query: 215 cccgcggtgtgccgcgccgggatcgtggcggcgctgcgctccgtgaagctgggcggcgcc 274
           ||||||||||||||||||||| | |||||||||||||| || |  |||||||||||||||
Sbjct: 204 cccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgcc 263

                                                                       
Query: 275 gccgtcgggctggtcatcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatc 334
           ||||| ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||
Sbjct: 264 gccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatc 323

                                                                       
Query: 335 gtggacgccgacggcggcatgatgtcgcaggcctgggagcccttctccgacgccctcgcc 394
           || ||||| |||||||| ||| ||||||||| ||||||||| ||| ||||||| ||||||
Sbjct: 324 gtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgcc 383

                                                                   
Query: 395 aatgcccccacccccgacgccctcctgcagctggtgcttcagtttgcaaaggatga 450
           |||||||||| ||||||||||||||| ||| | ||||||||||||||||| |||||
Sbjct: 384 aatgcccccaaccccgacgccctcctccagatagtgcttcagtttgcaaaagatga 439
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  289 bits (146), Expect = 4e-75
 Identities = 236/266 (88%)
 Strand = Plus / Minus

                                                                           
Query: 155     gacggcgcgaccttctcctacgggacggcggggttccgcgccgacgggagcaccatggcc 214
               ||||||||||  ||||| ||||||||||||||||||||||| || |||  | |||||| |
Sbjct: 5214760 gacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggc 5214701

                                                                           
Query: 215     cccgcggtgtgccgcgccgggatcgtggcggcgctgcgctccgtgaagctgggcggcgcc 274
               ||||||||||||||||||||| | |||||||||||||| || |  |||||||||||||||
Sbjct: 5214700 cccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgcc 5214641

                                                                           
Query: 275     gccgtcgggctggtcatcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatc 334
               ||||| ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||
Sbjct: 5214640 gccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatc 5214581

                                                                           
Query: 335     gtggacgccgacggcggcatgatgtcgcaggcctgggagcccttctccgacgccctcgcc 394
               || ||||| |||||||| ||| ||||||||| ||||||||| ||| ||||||| ||||||
Sbjct: 5214580 gtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgcc 5214521

                                         
Query: 395     aatgcccccacccccgacgccctcct 420
               |||||||||| |||||||||||||||
Sbjct: 5214520 aatgcccccaaccccgacgccctcct 5214495



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 107      gagcagcgcgcggccctgatcgccgcggcgtc 138
                ||||||||||||| || | |||||||||||||
Sbjct: 13081205 gagcagcgcgcggaccagctcgccgcggcgtc 13081236
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>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1715_A07
          Length = 130907

 Score =  289 bits (146), Expect = 4e-75
 Identities = 236/266 (88%)
 Strand = Plus / Minus

                                                                         
Query: 155   gacggcgcgaccttctcctacgggacggcggggttccgcgccgacgggagcaccatggcc 214
             ||||||||||  ||||| ||||||||||||||||||||||| || |||  | |||||| |
Sbjct: 81474 gacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggc 81415

                                                                         
Query: 215   cccgcggtgtgccgcgccgggatcgtggcggcgctgcgctccgtgaagctgggcggcgcc 274
             ||||||||||||||||||||| | |||||||||||||| || |  |||||||||||||||
Sbjct: 81414 cccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgcc 81355

                                                                         
Query: 275   gccgtcgggctggtcatcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatc 334
             ||||| ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||
Sbjct: 81354 gccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatc 81295

                                                                         
Query: 335   gtggacgccgacggcggcatgatgtcgcaggcctgggagcccttctccgacgccctcgcc 394
             || ||||| |||||||| ||| ||||||||| ||||||||| ||| ||||||| ||||||
Sbjct: 81294 gtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgcc 81235

                                       
Query: 395   aatgcccccacccccgacgccctcct 420
             |||||||||| |||||||||||||||
Sbjct: 81234 aatgcccccaaccccgacgccctcct 81209
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>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0589E08
          Length = 138416

 Score =  289 bits (146), Expect = 4e-75
 Identities = 236/266 (88%)
 Strand = Plus / Minus

                                                                         
Query: 155   gacggcgcgaccttctcctacgggacggcggggttccgcgccgacgggagcaccatggcc 214
             ||||||||||  ||||| ||||||||||||||||||||||| || |||  | |||||| |
Sbjct: 13523 gacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggc 13464

                                                                         
Query: 215   cccgcggtgtgccgcgccgggatcgtggcggcgctgcgctccgtgaagctgggcggcgcc 274
             ||||||||||||||||||||| | |||||||||||||| || |  |||||||||||||||
Sbjct: 13463 cccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgcc 13404

                                                                         
Query: 275   gccgtcgggctggtcatcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatc 334
             ||||| ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||
Sbjct: 13403 gccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatc 13344

                                                                         
Query: 335   gtggacgccgacggcggcatgatgtcgcaggcctgggagcccttctccgacgccctcgcc 394
             || ||||| |||||||| ||| ||||||||| ||||||||| ||| ||||||| ||||||
Sbjct: 13343 gtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgcc 13284

                                       
Query: 395   aatgcccccacccccgacgccctcct 420
             |||||||||| |||||||||||||||
Sbjct: 13283 aatgcccccaaccccgacgccctcct 13258
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>gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence
          Length = 89397

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 368   tgggagcccttctccgacgccctcgccaatgcccc 402
             ||||| |||||| |||||||||||||||| |||||
Sbjct: 41531 tgggaacccttcgccgacgccctcgccaacgcccc 41497
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 229     cgccgggatcgtggcggcgctgc 251
               |||||||||||||||||||||||
Sbjct: 1395737 cgccgggatcgtggcggcgctgc 1395759



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 271     cgccgccgtcgggctggtcatc 292
               ||||||||||||||||||||||
Sbjct: 1726449 cgccgccgtcgggctggtcatc 1726428



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 268     cggcgccgccgtcgggctggtc 289
               ||||||||||||||||||||||
Sbjct: 1273613 cggcgccgccgtcgggctggtc 1273592
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>gb|AC153488.1| Tribolium castaneum  BAC T.cast_C24H10 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 40580

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 266   ggcggcgccgccgtcgggctggtcat 291
             ||||||||||||| ||||||||||||
Sbjct: 25646 ggcggcgccgccgccgggctggtcat 25621
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>gb|AC152927.1| Tribolium castaneum  BAC T.cast_C19N19 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 137018

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 266   ggcggcgccgccgtcgggctggtcat 291
             ||||||||||||| ||||||||||||
Sbjct: 28160 ggcggcgccgccgccgggctggtcat 28185
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 400    ccccacccccgacgccctcctg 421
              ||||||||||||||||||||||
Sbjct: 102613 ccccacccccgacgccctcctg 102592
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>ref|NM_001039430.1| Tribolium castaneum abdominal-B (abd-B), mRNA
          Length = 2683

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 266 ggcggcgccgccgtcgggctggtcat 291
           ||||||||||||| ||||||||||||
Sbjct: 255 ggcggcgccgccgccgggctggtcat 230
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>gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmids 9669, 8334, 8199, and
             lambda clone 1160
          Length = 50849

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 290   atcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatcgtgga 339
             ||||||||||||||||||||   |   |||||||| ||||||||||||||
Sbjct: 40964 atcacggcgtcgcacaacccataccaggacaacggggtcaagatcgtgga 41013
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>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 285  tggtcatcacggcgtcgcacaacccc 310
            ||||||||||||| ||||||||||||
Sbjct: 3185 tggtcatcacggcctcgcacaacccc 3210
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>gb|AF227923.1|AF227923 Tribolium castaneum abdominal-B mRNA, complete cds
          Length = 2683

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 266 ggcggcgccgccgtcgggctggtcat 291
           ||||||||||||| ||||||||||||
Sbjct: 255 ggcggcgccgccgccgggctggtcat 230
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>emb|X75816.1|SCPCM1 S. cerevisiae PCM1/AGM1 gene
          Length = 3460

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 290  atcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatcgtgga 339
            ||||||||||||||||||||   |   |||||||| ||||||||||||||
Sbjct: 1568 atcacggcgtcgcacaacccataccaggacaacggggtcaagatcgtgga 1617
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>emb|X90459.1|SCDNASIMP S.cerevisiae DNA for SOM1 gene
          Length = 1865

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 290 atcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatcgtgga 339
           ||||||||||||||||||||   |   |||||||| ||||||||||||||
Sbjct: 741 atcacggcgtcgcacaacccataccaggacaacggggtcaagatcgtgga 692
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>gb|AC101752.14| Mus musculus chromosome 1, clone RP24-344C18, complete sequence
          Length = 164759

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 426    tggtgcttcagtttgcaaagga 447
              ||||||||||||||||||||||
Sbjct: 121970 tggtgcttcagtttgcaaagga 121991
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>gb|DQ331570.1| Synthetic construct Saccharomyces cerevisiae clone FLH145034.01X
           PCM1 gene, complete sequence
          Length = 1674

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 290 atcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatcgtgga 339
           ||||||||||||||||||||   |   |||||||| ||||||||||||||
Sbjct: 190 atcacggcgtcgcacaacccataccaggacaacggggtcaagatcgtgga 239
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>gb|AF002133.1|AF002133 Mycobacterium avium strain GIR10 transcriptional regulator (mav81)
             gene, partial cds, aconitase (acn), invasin 1 (inv1),
             invasin 2 (inv2), transcriptional regulator (moxR),
             ketoacyl-reductase (fabG), enoyl-reductase (inhA) and
             ferrochelatase (mav272) genes, complete cds
          Length = 15437

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 268   cggcgccgccgtcgggctggtc 289
             ||||||||||||||||||||||
Sbjct: 13748 cggcgccgccgtcgggctggtc 13727
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>gb|M30952.1|ORARGITX Orangutan 28S ribosomal RNA gene fragment
          Length = 2487

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 137 tctctcttccccgtgccggacggcgcgacc 166
           ||||||||||||| ||| ||||||||||||
Sbjct: 868 tctctcttccccgggcccgacggcgcgacc 839
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>gb|M18097.1|YSCPRB1 Yeast (S.cerevisiae) protease B (PRB1) gene, complete cds
          Length = 4662

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 290 atcacggcgtcgcacaaccccgtcggcgacaacggcgtcaagatcgtgga 339
           ||||||||||||||||||||   |   |||||||| ||||||||||||||
Sbjct: 454 atcacggcgtcgcacaacccataccaggacaacggggtcaagatcgtgga 405
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>ref|NM_188790.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 756

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 217 cgcggtgtgccgcgccgggatcgtg 241
           |||||||| ||||||||||||||||
Sbjct: 405 cgcggtgtaccgcgccgggatcgtg 429
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>gb|BC005064.1| Homo sapiens hypothetical protein MGC12972, mRNA (cDNA clone
           MGC:12972 IMAGE:3345778), complete cds
          Length = 1293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 123 gacgagcagcgcgcggccctg 103
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 112     gcgcgcggccctgatcgccgcggcg 136
               ||||||||||||| |||||||||||
Sbjct: 2760756 gcgcgcggccctgctcgccgcggcg 2760780
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 217    cgcggtgtgccgcgccgggatcgtg 241
              |||||||| ||||||||||||||||
Sbjct: 159683 cgcggtgtaccgcgccgggatcgtg 159659
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>gb|BC028146.1| Homo sapiens hypothetical protein MGC12972, mRNA (cDNA clone
           IMAGE:5217853), with apparent retained intron
          Length = 2028

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 113 gacgagcagcgcgcggccctg 93
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>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete
             sequence
          Length = 168712

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 113   cgcgcggccctgatcgccgcggcgt 137
             ||||||||| |||||||||||||||
Sbjct: 27306 cgcgcggccatgatcgccgcggcgt 27282
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>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the
              gene for DAN15 protein, a H3 histone, family 3A (H3F3A)
              (H3F3, H3.3A) pseudogene, the 5' end of the gene for
              BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG
              islands, complete sequence
          Length = 169218

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 113    cgcgcggccctgatcgccgcggcgt 137
              ||||||||| |||||||||||||||
Sbjct: 152569 cgcgcggccatgatcgccgcggcgt 152545
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>emb|X68285.1|HSRNAGLK H.sapiens mRNA for glycerol kinase
          Length = 1330

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 77   gcccctgccgccatggccgacccag 101
            |||||||||||||| ||||||||||
Sbjct: 1183 gcccctgccgccatagccgacccag 1159
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>gb|AE008721.1| Salmonella typhimurium LT2, section 29 of 220 of the complete genome
          Length = 19985

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 151  gccggacggcgcgaccttctc 171
            |||||||||||||||||||||
Sbjct: 5507 gccggacggcgcgaccttctc 5527
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   gctgggcggcgccgccgtcgg 282
             |||||||||||||||||||||
Sbjct: 47621 gctgggcggcgccgccgtcgg 47601
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 112    gcgcgcggccctgatcgccgcggcg 136
              ||||||||||||| |||||||||||
Sbjct: 941263 gcgcgcggccctgctcgccgcggcg 941287
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>gb|BC093008.1| Homo sapiens hypothetical protein MGC12972, mRNA (cDNA clone
           MGC:110861 IMAGE:30335716), complete cds
          Length = 1372

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 133 gacgagcagcgcgcggccctg 113
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>emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 3/20
          Length = 240050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   gccggacggcgcgaccttctc 171
             |||||||||||||||||||||
Sbjct: 77487 gccggacggcgcgaccttctc 77507
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>dbj|AK094091.1| Homo sapiens cDNA FLJ36772 fis, clone ADRGL2000064
          Length = 1633

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 92  gacgagcagcgcgcggccctg 72
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>gb|AF320622.1|AF320622 Homo sapiens FKSG24 (FKSG24) mRNA, complete cds
          Length = 1007

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 111 gacgagcagcgcgcggccctg 91
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>gb|AF416712.1|AF416712 Homo sapiens clone 1 unknown mRNA
          Length = 644

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 104 gacgagcagcgcgcggccctg 84
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>gb|S76043.1| fimA=SEF21 type 1 structural fimbrin [Salmonella enteritidis,
           27655-3b, Genomic, 558 nt]
          Length = 558

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 411 gccggacggcgcgaccttctc 431
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>gb|AC068499.1|AC068499 Homo sapiens chromosome 19, cosmid R26574 (LLNL-R_225F10), complete
             sequence
          Length = 36431

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   gacgagcagcgcgcggccctg 124
             |||||||||||||||||||||
Sbjct: 18180 gacgagcagcgcgcggccctg 18160
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 112     gcgcgcggccctgatcgccgcggcg 136
               ||||||||||||| |||||||||||
Sbjct: 1188064 gcgcgcggccctgctcgccgcggcg 1188040
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 217     cgcggtgtgccgcgccgggatcgtg 241
               |||||||| ||||||||||||||||
Sbjct: 8195562 cgcggtgtaccgcgccgggatcgtg 8195538



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 107      gagcagcgcgcggccctgatcgccgcggcgtc 138
                ||||||||||||| || | |||||||||||||
Sbjct: 31463304 gagcagcgcgcggaccagctcgccgcggcgtc 31463273
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>gb|L19338.1|STYFIMCLUS Salmonella typhimurium fimbrial gene cluster, complete sequence
          Length = 12168

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 151  gccggacggcgcgaccttctc 171
            |||||||||||||||||||||
Sbjct: 1473 gccggacggcgcgaccttctc 1493
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>ref|NM_032683.1| Homo sapiens hypothetical protein MGC12972 (FKSG24), mRNA
          Length = 1293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gacgagcagcgcgcggccctg 124
           |||||||||||||||||||||
Sbjct: 123 gacgagcagcgcgcggccctg 103
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 252     gctccgtgaagctgggcggcgccgccgtc 280
               ||||||||||||||| | |||||||||||
Sbjct: 6018477 gctccgtgaagctggccagcgccgccgtc 6018449
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C11
          Length = 139399

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 217    cgcggtgtgccgcgccgggatcgtg 241
              |||||||| ||||||||||||||||
Sbjct: 113280 cgcggtgtaccgcgccgggatcgtg 113256
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>emb|X65168.1|STFIMAG S.typhi fimA gene for fimbrin type 1
          Length = 802

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 525 gccggacggcgcgaccttctc 545
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>dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G12, full
           insert sequence
          Length = 893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 217 cgcggtgtgccgcgccgggatcgtg 241
           |||||||| ||||||||||||||||
Sbjct: 414 cgcggtgtaccgcgccgggatcgtg 438
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 151     gccggacggcgcgaccttctc 171
               |||||||||||||||||||||
Sbjct: 2384614 gccggacggcgcgaccttctc 2384594
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>gb|AF083912.1|AF083912 Salmonella enterica VI strain RKS2995 major pilin protein FimA
           (fimA) and fimbrin-like protein FimI (fimI) genes,
           partial cds
          Length = 674

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 339 gccggacggcgcgaccttctc 359
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>gb|AF083911.1|AF083911 Salmonella enterica II strain RKS2985 major pilin protein FimA
           (fimA) and fimbrin-like protein FimI (fimI) genes,
           partial cds
          Length = 673

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 339 gccggacggcgcgaccttctc 359
to top
>gb|AF083905.1|AF083905 Salmonella enterica VI strain RKS3057 major pilin protein FimA
           (fimA) and fimbrin-like protein FimI (fimI) genes,
           partial cds
          Length = 674

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 339 gccggacggcgcgaccttctc 359
to top
>gb|AF083900.1|AF083900 Salmonella enterica serovar Typhimurium major pilin protein FimA
           (fimA) and fimbrin-like protein FimI (fimI) genes,
           partial cds
          Length = 675

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 339 gccggacggcgcgaccttctc 359
to top
>gb|AF083899.1|AF083899 Salmonella enterica serovar Typhi major pilin protein FimA (fimA)
           and fimbrin-like protein FimI (fimI) genes, partial cds
          Length = 671

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 339 gccggacggcgcgaccttctc 359
to top
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    gccggacggcgcgaccttctc 171
              |||||||||||||||||||||
Sbjct: 648874 gccggacggcgcgaccttctc 648894
to top
>emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate E7
          Length = 6170

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 113  cgcgcggccctgatcgccgcggcgt 137
            ||||||||| |||||||||||||||
Sbjct: 3270 cgcgcggccatgatcgccgcggcgt 3294
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>gb|M18283.1|STYFIMB S.typhimurium fimbrial subunit type 1 gene, complete cds
          Length = 1013

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 gccggacggcgcgaccttctc 171
           |||||||||||||||||||||
Sbjct: 765 gccggacggcgcgaccttctc 785
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>ref|XM_469952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1293

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 391 cgccaatgcccccacccccgacgccctc 418
           ||||||||||||| |||||| |||||||
Sbjct: 37  cgccaatgcccccgcccccggcgccctc 10
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>ref|XM_472283.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5409

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 107  gagcagcgcgcggccctgatcgccgcggcgtc 138
            ||||||||||||| || | |||||||||||||
Sbjct: 1978 gagcagcgcgcggaccagctcgccgcggcgtc 2009
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>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16,
              complete sequence
          Length = 139615

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    cgccgggatcgtggcggcgc 248
              ||||||||||||||||||||
Sbjct: 101351 cgccgggatcgtggcggcgc 101370
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>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006B22, complete sequence
          Length = 166052

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   cgccgggatcgtggcggcgc 248
             ||||||||||||||||||||
Sbjct: 20511 cgccgggatcgtggcggcgc 20530
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>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 391   cgccaatgcccccacccccgacgccctc 418
             ||||||||||||| |||||| |||||||
Sbjct: 88002 cgccaatgcccccgcccccggcgccctc 88029
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 322     cggcgtcaagatcgtggacgccgacggcggca 353
               ||||||| ||||||||| || |||||||||||
Sbjct: 3591968 cggcgtcgagatcgtggtcgtcgacggcggca 3591937



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 361     gcaggcctgggagcccttctccga 384
               ||||||||||| ||||||||||||
Sbjct: 2221477 gcaggcctgggtgcccttctccga 2221500
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 391      cgccaatgcccccacccccgacgccctc 418
                ||||||||||||| |||||| |||||||
Sbjct: 32655905 cgccaatgcccccgcccccggcgccctc 32655878
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>ref|XM_799829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503499.20) partial mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cgtcggcgacaacggcgtca 329
           ||||||||||||||||||||
Sbjct: 410 cgtcggcgacaacggcgtca 429
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>ref|XM_801423.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506979.40) partial mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cgtcggcgacaacggcgtca 329
           ||||||||||||||||||||
Sbjct: 410 cgtcggcgacaacggcgtca 429
to top
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12
          Length = 329100

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    gacgagcagcgcgcggccct 123
              ||||||||||||||||||||
Sbjct: 311595 gacgagcagcgcgcggccct 311576
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     tggcggcgctgcgctccgtg 259
               ||||||||||||||||||||
Sbjct: 4109884 tggcggcgctgcgctccgtg 4109865
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>emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chromosome 1p36.23-36.33
              Contains the 3' end of the PRDM16 gene for PR domain
              containing 16 and two CpG islands, complete sequence
          Length = 140572

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     gctgccccgtcgcatccctg 54
              ||||||||||||||||||||
Sbjct: 128697 gctgccccgtcgcatccctg 128678
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>emb|AL031123.14|HS80N2 Human DNA sequence from clone RP1-80N2 on chromosome 6p24.1-25.3 Contains
              the gene for MD-1,RP105-associated, part of a putative
              novel gene and three putative CpG islands, complete
              sequence
          Length = 193731

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cttcagtttgcaaaggatga 450
              ||||||||||||||||||||
Sbjct: 130064 cttcagtttgcaaaggatga 130083
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    gccggacggcgcgaccttct 170
              ||||||||||||||||||||
Sbjct: 301138 gccggacggcgcgaccttct 301157
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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   gccggacggcgcgaccttct 170
             ||||||||||||||||||||
Sbjct: 60437 gccggacggcgcgaccttct 60456
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    gccggacggcgcgaccttct 170
              ||||||||||||||||||||
Sbjct: 138542 gccggacggcgcgaccttct 138561
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>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19,
              complete sequence
          Length = 188317

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 107    gagcagcgcgcggccctgatcgccgcggcgtc 138
              ||||||||||||| || | |||||||||||||
Sbjct: 178152 gagcagcgcgcggaccagctcgccgcggcgtc 178121
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>dbj|AK094178.1| Homo sapiens cDNA FLJ36859 fis, clone ASTRO2015214
          Length = 2500

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gctgccccgtcgcatccctg 54
           ||||||||||||||||||||
Sbjct: 674 gctgccccgtcgcatccctg 655
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>dbj|AK093853.1| Homo sapiens cDNA FLJ36534 fis, clone TRACH2004499
          Length = 2057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gctgccccgtcgcatccctg 54
           ||||||||||||||||||||
Sbjct: 233 gctgccccgtcgcatccctg 214
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cgcggccctgatcgccgcgg 134
              ||||||||||||||||||||
Sbjct: 477040 cgcggccctgatcgccgcgg 477059
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>ref|NM_022114.2| Homo sapiens PR domain containing 16 (PRDM16), transcript variant 1,
            mRNA
          Length = 8726

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gctgccccgtcgcatccctg 54
            ||||||||||||||||||||
Sbjct: 6890 gctgccccgtcgcatccctg 6871
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>ref|NM_199454.1| Homo sapiens PR domain containing 16 (PRDM16), transcript variant 2,
            mRNA
          Length = 8669

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gctgccccgtcgcatccctg 54
            ||||||||||||||||||||
Sbjct: 6833 gctgccccgtcgcatccctg 6814
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>ref|XM_688270.1| PREDICTED: Danio rerio similar to SMT3 isopeptidase 1 (LOC564950),
           mRNA
          Length = 2366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 399 cccccacccccgacgccctcctgc 422
           |||||||||||| |||||||||||
Sbjct: 282 cccccacccccggcgccctcctgc 259
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 107      gagcagcgcgcggccctgatcgccgcggcgtc 138
                ||||||||||||| || | |||||||||||||
Sbjct: 19086227 gagcagcgcgcggaccagctcgccgcggcgtc 19086196
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      gggcggcgccgccgtcgggc 284
                ||||||||||||||||||||
Sbjct: 25124310 gggcggcgccgccgtcgggc 25124291
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 229      cgccgggatcgtggcggcgc 248
                ||||||||||||||||||||
Sbjct: 14685057 cgccgggatcgtggcggcgc 14685076
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 391      cgccaatgcccccacccccgacgccctc 418
                ||||||||||||| |||||| |||||||
Sbjct: 32746415 cgccaatgcccccgcccccggcgccctc 32746388
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>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0046E05
          Length = 162776

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 107   gagcagcgcgcggccctgatcgccgcggcgtc 138
             ||||||||||||| || | |||||||||||||
Sbjct: 57368 gagcagcgcgcggaccagctcgccgcggcgtc 57337
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>ref|NM_204104.1| Gallus gallus retina and anterior neural fold homeobox (RAX), mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 cggcgccgccgtcgggctgg 287
           ||||||||||||||||||||
Sbjct: 347 cggcgccgccgtcgggctgg 328
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>emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 in linkage group 5,
             complete sequence
          Length = 170241

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   cccccacccccgacgccctcctgc 422
             |||||||||||| |||||||||||
Sbjct: 90998 cccccacccccggcgccctcctgc 90975
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>dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0048L03
          Length = 142377

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   gggcggcgccgccgtcgggc 284
             ||||||||||||||||||||
Sbjct: 70496 gggcggcgccgccgtcgggc 70477
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0077F02
          Length = 172442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 107    gagcagcgcgcggccctgatcgccgcggcgtc 138
              ||||||||||||| || | |||||||||||||
Sbjct: 155502 gagcagcgcgcggaccagctcgccgcggcgtc 155533
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>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome
          Length = 161046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 266   ggcggcgccgccgtcgggctggtc 289
             ||||||||||||| ||||||||||
Sbjct: 56674 ggcggcgccgccgccgggctggtc 56651
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>gb|AF080002.1|AF080002 Heliobacillus mobilis exopolyphosphatase Ppx (ppx) gene, partial cds;
             cobyric acid synthase CobQ (cobQ), UDP-N-acetylmuramyl
             tripeptide synthetase MurC (murC), glutamyl tRNA reductase
             HemA (hemA), photosynthesis gene cluster, complete
             sequence, stage II sporulation protein E Sp2E (sp2E), cell
             cycle protein MesJ (mesJ), and ATP-dependent zinc
             metallopeptidase FtsH (ftsH) genes, complete cds; and
             nucleoside diphosphate kinase B NdkB (ndkB) gene, partial
             cds
          Length = 35618

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tcgccgcggcgtctctcttc 145
             ||||||||||||||||||||
Sbjct: 30221 tcgccgcggcgtctctcttc 30202
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 269    ggcgccgccgtcgggctggtcatc 292
              |||||||||||||||| |||||||
Sbjct: 779894 ggcgccgccgtcgggcaggtcatc 779871
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 107   gagcagcgcgcggccctgatcgccgcggcgtc 138
             ||||||||||||| || | |||||||||||||
Sbjct: 19748 gagcagcgcgcggaccagctcgccgcggcgtc 19717
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>gb|U18061.1|CGU18061 Colletotrichum gloeosporioides CAP20 (cap20) gene, complete cds
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gctcgctgccccgtcgcatc 50
            ||||||||||||||||||||
Sbjct: 1737 gctcgctgccccgtcgcatc 1718
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>gb|AF420600.1| Gallus gallus homeobox transcription factor RAX1 (RAX1) mRNA,
           complete cds
          Length = 1230

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 cggcgccgccgtcgggctgg 287
           ||||||||||||||||||||
Sbjct: 347 cggcgccgccgtcgggctgg 328
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>dbj|AB020318.1| Gallus gallus mRNA for homeobox protein cRax/Rax2/Rx2, complete cds
          Length = 1195

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 cggcgccgccgtcgggctgg 287
           ||||||||||||||||||||
Sbjct: 180 cggcgccgccgtcgggctgg 161
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>dbj|AB051462.2| Homo sapiens mRNA for KIAA1675 protein, partial cds
          Length = 8671

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gctgccccgtcgcatccctg 54
            ||||||||||||||||||||
Sbjct: 6845 gctgccccgtcgcatccctg 6826


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,287,184
Number of Sequences: 3902068
Number of extensions: 3287184
Number of successful extensions: 78169
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76130
Number of HSP's gapped (non-prelim): 2039
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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