No.
Definition
Score (bits)
E Value
1 ref|XM_482080.1| Oryza sativa (japonica cultivar-group), mRNA
337
2e-89
2 dbj|AK069663.1| Oryza sativa (japonica cultivar-group) cDNA clon...
321
1e-84
3 dbj|AK101135.1| Oryza sativa (japonica cultivar-group) cDNA clon...
198
1e-47
4 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
159
1e-35
5 dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic D...
159
1e-35
6 dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic D...
159
1e-35
7 dbj|AK120761.1| Oryza sativa (japonica cultivar-group) cDNA clon...
159
1e-35
8 ref|XM_476134.1| Oryza sativa (japonica cultivar-group), predic...
78
3e-11
9 dbj|AK064744.1| Oryza sativa (japonica cultivar-group) cDNA clon...
78
3e-11
10 gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome...
66
1e-07
11 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
66
1e-07
12 ref|XM_637640.1| Dictyostelium discoideum hypothetical protein (...
42
1.7
13 gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173...
42
1.7
14 gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
42
1.7
15 emb|BX649484.12| Zebrafish DNA sequence from clone CH211-197H24 ...
42
1.7
16 emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 i...
42
1.7
17 emb|CR812466.18| Zebrafish DNA sequence from clone CH211-269M1 i...
42
1.7
18 ref|XM_516904.1| PREDICTED: Pan troglodytes similar to ATP-bindi...
40
6.5
19 ref|NM_005688.2| Homo sapiens ATP-binding cassette, sub-family C...
40
6.5
20 gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB...
40
6.5
21 gb|AC148137.3| Callicebus moloch clone LB5-202I8, complete sequence
40
6.5
22 ref|XM_822876.1| Trypanosoma brucei TREU927 sarcoplasmic reticul...
40
6.5
23 gb|AY117972.1| Anopheles arabiensis isolate A_14153 tryptophan o...
40
6.5
24 gb|AY117965.1| Anopheles arabiensis isolate A_1551 tryptophan ox...
40
6.5
25 gb|AY117963.1| Anopheles arabiensis isolate A_1536 tryptophan ox...
40
6.5
26 gb|AY117961.1| Anopheles arabiensis isolate A_K1_2 tryptophan ox...
40
6.5
27 gb|AY117917.1| Anopheles gambiae isolate G_14817 tryptophan oxyg...
40
6.5
28 gb|AC069256.15| Homo sapiens 3 BAC RP11-445G6 (Roswell Park Canc...
40
6.5
29 gb|AC092944.14| Homo sapiens 3 BAC RP11-550I24 (Roswell Park Can...
40
6.5
30 gb|DQ399710.1| Sphingomonas sp. BHC-A maleylacetate reductase (l...
40
6.5
31 gb|AC010856.12| Homo sapiens chromosome 8, clone RP11-138J2, com...
40
6.5
32 dbj|AB177985.1| Sphingobium japonicum genes for putative glutath...
40
6.5
33 gb|AY196484.1| Homo sapiens ATP-binding cassette C5 splicing var...
40
6.5
34 gb|AF151429.1|AF151429 Juniperus virginiana pollen major allerge...
40
6.5
35 gb|AF151427.1|AF151427 Juniperus virginiana pollen major allerge...
40
6.5
36 gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, compl...
40
6.5
37 gb|AE004899.1| Pseudomonas aeruginosa PAO1, section 460 of 529 o...
40
6.5
38 gb|U83661.2|HSU83661 Homo sapiens multidrug resistance protein 5...
40
6.5
39 emb|AL929584.22| Zebrafish DNA sequence from clone CH211-147H21 ...
40
6.5
40 emb|BX647245.1|HSM807389 Homo sapiens mRNA; cDNA DKFZp686C1782 (...
40
6.5
41 gb|AF106663.1|AF106663 Juniperus ashei pollen major allergen 1-2...
40
6.5
42 gb|AF106662.1|AF106662 Juniperus ashei pollen major allergen 1-1...
40
6.5
43 gb|AF146074.1|AF146074 Homo sapiens ABC protein mRNA, complete cds
40
6.5
44 gb|AF104942.1|AF104942 Homo sapiens ABC transporter MOAT-C (MOAT...
40
6.5
45 gb|AC118735.8| Mus musculus chromosome 7, clone RP24-170M16, com...
40
6.5
46 dbj|AB209454.1| Homo sapiens mRNA for Multidrug resistance-assoc...
40
6.5
47 dbj|AB209103.1| Homo sapiens mRNA for ATP-binding cassette C5 sp...
40
6.5
48 gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
40
6.5
49 gb|AC068644.15| Homo sapiens 3 BAC RP11-315J22 (Roswell Park Can...
40
6.5
50 dbj|AB019002.1| Homo sapiens MRP5 mRNA, complete cds
40
6.5
51 dbj|AB005659.1| Homo sapiens SMRP mRNA, complete cds
40
6.5
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 159 bits (80), Expect = 1e-35
Identities = 125/140 (89%)
Strand = Plus / Plus
Query: 270 ggggaggttgcattgcccggaggaaaggcagatgagggcgatgctgatgatgcagcaaca 329
||||||||| | ||||| ||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 17628964 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 17629023
Query: 330 gcattaagggaggcaaaggaggagattgggcttgatccatccttggtcactgtcgtttcc 389
||||||||||||||||||||||||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 17629024 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 17629083
Query: 390 tcgcttgagcacttcttgtc 409
|| |||||||||||||||||
Sbjct: 17629084 tctcttgagcacttcttgtc 17629103
Score = 137 bits (69), Expect = 4e-29
Identities = 120/137 (87%)
Strand = Plus / Plus
Query: 273 gaggttgcattgcccggaggaaaggcagatgagggcgatgctgatgatgcagcaacagca 332
|||||||||||||| ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 17638138 gaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagca 17638197
Query: 333 ttaagggaggcaaaggaggagattgggcttgatccatccttggtcactgtcgtttcctcg 392
| || ||||||||||||||||||||||||||||| || ||||||||||| ||| ||||
Sbjct: 17638198 ctgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctct 17638257
Query: 393 cttgagcacttcttgtc 409
| ||||| ||||||||
Sbjct: 17638258 ttagagcatttcttgtc 17638274
Score = 97.6 bits (49), Expect = 3e-17
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 171 cctcggagagccgccgtgctggtctgcctcttccaggacgctgccggcgagctgcgtgtc 230
|||||||| |||||||||||| |||||||||||| | ||| ||||||||||| ||||||
Sbjct: 17627740 cctcggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtc 17627799
Query: 231 ctcctcaccaagcgcgcttcctccctctccacccactccgg 271
||||||||||||||| | ||| |||||| ||||||||||
Sbjct: 17627800 ctcctcaccaagcgctcctccaaactctcctcccactccgg 17627840
Score = 89.7 bits (45), Expect = 8e-15
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 412 agcatcttctggtagttgttcctgttgttggtatactctcagatatacacgcattcaaac 471
||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 17630016 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 17630075
Query: 472 ctatccttaatgt 484
|| | ||||||||
Sbjct: 17630076 ctgttcttaatgt 17630088
Score = 65.9 bits (33), Expect = 1e-07
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 412 agcatcttctggtagttgttcctgttgttggtatactctcagatatacacgcattcaaac 471
||||||||||||| ||||||||| ||||||| || |||||||||||| | ||||| || |
Sbjct: 17638429 agcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagc 17638488
Query: 472 ctatccttaatgt 484
|| | ||||||||
Sbjct: 17638489 ctgttcttaatgt 17638501
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 215 cggcgagctgcgtgtcctcctcaccaagcgcgcttcctccctctccacccactccgg 271
||||||||| || ||| ||||||||||||| | |||||||||||||||||||||||
Sbjct: 17636538 cggcgagctccgcgtcatcctcaccaagcgatcctcctccctctccacccactccgg 17636594
Score = 54.0 bits (27), Expect = 4e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 174 cggagagccgccgtgctggtctgcctcttcc 204
||||| |||||||||||||||||||||||||
Sbjct: 17636491 cggagggccgccgtgctggtctgcctcttcc 17636521
Score = 48.1 bits (24), Expect = 0.027
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 gcatcgaggctctcatccgacggcttaggctccaccagccgcctccctcccc 115
|||||||||| ||| |||| || || ||||| |||||||||||||||||||
Sbjct: 17636384 gcatcgaggcgctcgtccgccgcctcaggctgtaccagccgcctccctcccc 17636435
>dbj|AP004397.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0436B06
Length = 148947
Score = 159 bits (80), Expect = 1e-35
Identities = 125/140 (89%)
Strand = Plus / Plus
Query: 270 ggggaggttgcattgcccggaggaaaggcagatgagggcgatgctgatgatgcagcaaca 329
||||||||| | ||||| ||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 105614 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 105673
Query: 330 gcattaagggaggcaaaggaggagattgggcttgatccatccttggtcactgtcgtttcc 389
||||||||||||||||||||||||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 105674 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 105733
Query: 390 tcgcttgagcacttcttgtc 409
|| |||||||||||||||||
Sbjct: 105734 tctcttgagcacttcttgtc 105753
Score = 137 bits (69), Expect = 4e-29
Identities = 120/137 (87%)
Strand = Plus / Plus
Query: 273 gaggttgcattgcccggaggaaaggcagatgagggcgatgctgatgatgcagcaacagca 332
|||||||||||||| ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 114788 gaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagca 114847
Query: 333 ttaagggaggcaaaggaggagattgggcttgatccatccttggtcactgtcgtttcctcg 392
| || ||||||||||||||||||||||||||||| || ||||||||||| ||| ||||
Sbjct: 114848 ctgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctct 114907
Query: 393 cttgagcacttcttgtc 409
| ||||| ||||||||
Sbjct: 114908 ttagagcatttcttgtc 114924
Score = 97.6 bits (49), Expect = 3e-17
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 171 cctcggagagccgccgtgctggtctgcctcttccaggacgctgccggcgagctgcgtgtc 230
|||||||| |||||||||||| |||||||||||| | ||| ||||||||||| ||||||
Sbjct: 104390 cctcggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtc 104449
Query: 231 ctcctcaccaagcgcgcttcctccctctccacccactccgg 271
||||||||||||||| | ||| |||||| ||||||||||
Sbjct: 104450 ctcctcaccaagcgctcctccaaactctcctcccactccgg 104490
Score = 89.7 bits (45), Expect = 8e-15
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 412 agcatcttctggtagttgttcctgttgttggtatactctcagatatacacgcattcaaac 471
||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 106666 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 106725
Query: 472 ctatccttaatgt 484
|| | ||||||||
Sbjct: 106726 ctgttcttaatgt 106738
Score = 65.9 bits (33), Expect = 1e-07
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 412 agcatcttctggtagttgttcctgttgttggtatactctcagatatacacgcattcaaac 471
||||||||||||| ||||||||| ||||||| || |||||||||||| | ||||| || |
Sbjct: 115079 agcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagc 115138
Query: 472 ctatccttaatgt 484
|| | ||||||||
Sbjct: 115139 ctgttcttaatgt 115151
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 215 cggcgagctgcgtgtcctcctcaccaagcgcgcttcctccctctccacccactccgg 271
||||||||| || ||| ||||||||||||| | |||||||||||||||||||||||
Sbjct: 113188 cggcgagctccgcgtcatcctcaccaagcgatcctcctccctctccacccactccgg 113244
Score = 54.0 bits (27), Expect = 4e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 174 cggagagccgccgtgctggtctgcctcttcc 204
||||| |||||||||||||||||||||||||
Sbjct: 113141 cggagggccgccgtgctggtctgcctcttcc 113171
Score = 48.1 bits (24), Expect = 0.027
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 gcatcgaggctctcatccgacggcttaggctccaccagccgcctccctcccc 115
|||||||||| ||| |||| || || ||||| |||||||||||||||||||
Sbjct: 113034 gcatcgaggcgctcgtccgccgcctcaggctgtaccagccgcctccctcccc 113085
>dbj|AP003962.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1705_C03
Length = 118339
Score = 159 bits (80), Expect = 1e-35
Identities = 125/140 (89%)
Strand = Plus / Plus
Query: 270 ggggaggttgcattgcccggaggaaaggcagatgagggcgatgctgatgatgcagcaaca 329
||||||||| | ||||| ||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 14353 ggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaaca 14412
Query: 330 gcattaagggaggcaaaggaggagattgggcttgatccatccttggtcactgtcgtttcc 389
||||||||||||||||||||||||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 14413 gcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcc 14472
Query: 390 tcgcttgagcacttcttgtc 409
|| |||||||||||||||||
Sbjct: 14473 tctcttgagcacttcttgtc 14492
Score = 137 bits (69), Expect = 4e-29
Identities = 120/137 (87%)
Strand = Plus / Plus
Query: 273 gaggttgcattgcccggaggaaaggcagatgagggcgatgctgatgatgcagcaacagca 332
|||||||||||||| ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 23527 gaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagca 23586
Query: 333 ttaagggaggcaaaggaggagattgggcttgatccatccttggtcactgtcgtttcctcg 392
| || ||||||||||||||||||||||||||||| || ||||||||||| ||| ||||
Sbjct: 23587 ctgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctct 23646
Query: 393 cttgagcacttcttgtc 409
| ||||| ||||||||
Sbjct: 23647 ttagagcatttcttgtc 23663
Score = 97.6 bits (49), Expect = 3e-17
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 171 cctcggagagccgccgtgctggtctgcctcttccaggacgctgccggcgagctgcgtgtc 230
|||||||| |||||||||||| |||||||||||| | ||| ||||||||||| ||||||
Sbjct: 13129 cctcggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtc 13188
Query: 231 ctcctcaccaagcgcgcttcctccctctccacccactccgg 271
||||||||||||||| | ||| |||||| ||||||||||
Sbjct: 13189 ctcctcaccaagcgctcctccaaactctcctcccactccgg 13229
Score = 89.7 bits (45), Expect = 8e-15
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 412 agcatcttctggtagttgttcctgttgttggtatactctcagatatacacgcattcaaac 471
||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 15405 agcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaac 15464
Query: 472 ctatccttaatgt 484
|| | ||||||||
Sbjct: 15465 ctgttcttaatgt 15477
Score = 65.9 bits (33), Expect = 1e-07
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 412 agcatcttctggtagttgttcctgttgttggtatactctcagatatacacgcattcaaac 471
||||||||||||| ||||||||| ||||||| || |||||||||||| | ||||| || |
Sbjct: 23818 agcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagc 23877
Query: 472 ctatccttaatgt 484
|| | ||||||||
Sbjct: 23878 ctgttcttaatgt 23890
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 215 cggcgagctgcgtgtcctcctcaccaagcgcgcttcctccctctccacccactccgg 271
||||||||| || ||| ||||||||||||| | |||||||||||||||||||||||
Sbjct: 21927 cggcgagctccgcgtcatcctcaccaagcgatcctcctccctctccacccactccgg 21983
Score = 54.0 bits (27), Expect = 4e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 174 cggagagccgccgtgctggtctgcctcttcc 204
||||| |||||||||||||||||||||||||
Sbjct: 21880 cggagggccgccgtgctggtctgcctcttcc 21910
Score = 48.1 bits (24), Expect = 0.027
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 64 gcatcgaggctctcatccgacggcttaggctccaccagccgcctccctcccc 115
|||||||||| ||| |||| || || ||||| |||||||||||||||||||
Sbjct: 21773 gcatcgaggcgctcgtccgccgcctcaggctgtaccagccgcctccctcccc 21824
>gb|AY331258.1 | Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
(orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
(orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
genes, complete cds; insertion sequence IS6100A, complete
sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
cds; insertion sequence IS6100B, complete sequence; LinC
(linC) gene, complete cds; insertion sequence IS6100C,
complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
(orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
(orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
(orfX), and ORFY (orfY) genes, complete cds
Length = 41034
Score = 40.1 bits (20), Expect = 6.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 203 ccaggacgctgccggcgagc 222
||||||||||||||||||||
Sbjct: 16907 ccaggacgctgccggcgagc 16926
>dbj|AB177985.1 | Sphingobium japonicum genes for putative glutathione S transferase,
hypothetical protein, maleylacetate reductase, putative
LysR-type transcriptional regulator,
2,6-Dichloro-p-hydroquinone 1,2-dioxygenase, putative Na+
H+ antiporter, putative arylsulfatase precursor, putative
glutathione transferase, complete and partial cds
Length = 9888
Score = 40.1 bits (20), Expect = 6.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 203 ccaggacgctgccggcgagc 222
||||||||||||||||||||
Sbjct: 3227 ccaggacgctgccggcgagc 3246
>dbj|AB005659.1 | Homo sapiens SMRP mRNA, complete cds
Length = 4939
Score = 40.1 bits (20), Expect = 6.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 300 gatgagggcgatgctgatga 319
||||||||||||||||||||
Sbjct: 2593 gatgagggcgatgctgatga 2574
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,321,130
Number of Sequences: 3902068
Number of extensions: 4321130
Number of successful extensions: 85442
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85249
Number of HSP's gapped (non-prelim): 192
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)