ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59d04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 321 bits (162), Expect = 9e-85 Identities = 216/234 (92%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 8140236 atgatggagacggcggcggcggcgatgctggaggccggggtggggaggttccgggggccg 8140295 Query: 162 agcctcgcggcgctgctggcggagatgtgggcgccgctggccgtggcgctggcggcgctc 221 ||| | |||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 8140296 agcgtggcggcgctgctggcggagatgtgggcgccgctggccgtcgcgctcgcggcgctg 8140355 Query: 222 gcgacgctgcccagcctgctcggcaggctgcaggtgctcatcctccgcctccgctcccgc 281 ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| ||| Sbjct: 8140356 gcgacgctgcccagccttctccggcggctgcaggtgctcatcctccgcctccgctcacgc 8140415 Query: 282 gggaaggaggtcatctcctcgcacatctccacctactactcctccggggacgac 335 || ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 8140416 ggcaaggaggtcatctcctcccacatctccacctactactcctccggcgacgac 8140469
>dbj|AP005687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0019B22 Length = 137457 Score = 321 bits (162), Expect = 9e-85 Identities = 216/234 (92%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 63661 atgatggagacggcggcggcggcgatgctggaggccggggtggggaggttccgggggccg 63720 Query: 162 agcctcgcggcgctgctggcggagatgtgggcgccgctggccgtggcgctggcggcgctc 221 ||| | |||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 63721 agcgtggcggcgctgctggcggagatgtgggcgccgctggccgtcgcgctcgcggcgctg 63780 Query: 222 gcgacgctgcccagcctgctcggcaggctgcaggtgctcatcctccgcctccgctcccgc 281 ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| ||| Sbjct: 63781 gcgacgctgcccagccttctccggcggctgcaggtgctcatcctccgcctccgctcacgc 63840 Query: 282 gggaaggaggtcatctcctcgcacatctccacctactactcctccggggacgac 335 || ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 63841 ggcaaggaggtcatctcctcccacatctccacctactactcctccggcgacgac 63894
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 9e-17 Identities = 69/76 (90%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctccgcctccgctcccgcgggaaggaggtcatctcctcgcacat 307 ||||| ||||||||||||||||||||| |||||| | |||||||||||||||| || || Sbjct: 4145060 gctgctggtgctcatcctccgcctccgatcccgcagcgaggaggtcatctcctcccaaat 4145001 Query: 308 ctccacctactactcc 323 |||||||||||||||| Sbjct: 4145000 ctccacctactactcc 4144985 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 124 cgatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctgg 180 ||||| ||||| ||||||| ||| |||||| |||||||||| | ||||||||||||| Sbjct: 4145109 cgatggtggagaccggggtagggaggttccaggggccgagcatggcggcgctgctgg 4145053 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 cctctcttcgtcttcctcctccc 40 ||||||||||||||||||||||| Sbjct: 27082767 cctctcttcgtcttcctcctccc 27082789 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgtcttcctcctcccattctcgc 48 ||||||||||||||||| |||||| Sbjct: 13188142 tcgtcttcctcctcccactctcgc 13188165
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 95.6 bits (48), Expect = 9e-17 Identities = 69/76 (90%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctccgcctccgctcccgcgggaaggaggtcatctcctcgcacat 307 ||||| ||||||||||||||||||||| |||||| | |||||||||||||||| || || Sbjct: 78319 gctgctggtgctcatcctccgcctccgatcccgcagcgaggaggtcatctcctcccaaat 78260 Query: 308 ctccacctactactcc 323 |||||||||||||||| Sbjct: 78259 ctccacctactactcc 78244 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 124 cgatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctgg 180 ||||| ||||| ||||||| ||| |||||| |||||||||| | ||||||||||||| Sbjct: 78368 cgatggtggagaccggggtagggaggttccaggggccgagcatggcggcgctgctgg 78312
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 125 gatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctggcgga 184 |||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||| | ||| Sbjct: 129113 gatgatggagaccggggtggggaggttccgggggccgagcatggcggcgctgcttgtgga 129172 Query: 185 gatgtgg 191 ||||||| Sbjct: 129173 gatgtgg 129179
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 125 gatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctggcgga 184 |||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||| | ||| Sbjct: 25000065 gatgatggagaccggggtggggaggttccgggggccgagcatggcggcgctgcttgtgga 25000124 Query: 185 gatgtgg 191 ||||||| Sbjct: 25000125 gatgtgg 25000131 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 1610954 acgaggccgactccgacggcgacggc 1610929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 125 gatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctggcgga 184 |||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||| | ||| Sbjct: 25311655 gatgatggagaccggggtggggaggttccgggggccgagcatggcggcgctgcttgtgga 25311714 Query: 185 gatgtgg 191 ||||||| Sbjct: 25311715 gatgtgg 25311721 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 1608675 acgaggccgactccgacggcgacggc 1608650
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 22946452 atgatggagacggcggcggcggcgatgctggagaccggggtgggaaggttccgggggccg 22946511 Query: 162 agcc 165 |||| Sbjct: 22946512 agcc 22946515 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 1559858 acgaggccgactccgacggcgacggc 1559833
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 22874643 atgatggagacggcggcggcggcgatgctggagaccggggtgggaaggttccgggggccg 22874702 Query: 162 agcc 165 |||| Sbjct: 22874703 agcc 22874706 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 1559858 acgaggccgactccgacggcgacggc 1559833
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 55729 atgatggagacggcggcggcggcgatgctggagaccggggtgggaaggttccgggggccg 55788 Query: 162 agcc 165 |||| Sbjct: 55789 agcc 55792
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 10393 atgatggagacggcggcggcggcgatgctggagaccggggtgggaaggttccgggggccg 10334 Query: 162 agcc 165 |||| Sbjct: 10333 agcc 10330
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 69.9 bits (35), Expect = 5e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 124 cgatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctggcgg 183 ||||||| ||| || |||||||| |||| |||||||||||| | |||||||| |||| || Sbjct: 54786 cgatgctagagaccagggtggggaggtttcgggggccgagcatggcggcgctactggtgg 54845 Query: 184 agatgtgggcgccgctggc 202 ||||||||| ||| ||||| Sbjct: 54846 agatgtgggagccactggc 54864
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 5e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 124 cgatgctggaggccggggtggggcggttccgggggccgagcctcgcggcgctgctggcgg 183 ||||||| ||| || |||||||| |||| |||||||||||| | |||||||| |||| || Sbjct: 8333742 cgatgctagagaccagggtggggaggtttcgggggccgagcatggcggcgctactggtgg 8333801 Query: 184 agatgtgggcgccgctggc 202 ||||||||| ||| ||||| Sbjct: 8333802 agatgtgggagccactggc 8333820 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ccgactccgacggcgacggc 359 |||||||||||||||||||| Sbjct: 18262809 ccgactccgacggcgacggc 18262790
>ref|XM_469898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 162 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 16 atgatggagacggcggcggcggcgatgctggagaccggggtggagaggttccgggggccg 75 Query: 162 ag 163 || Sbjct: 76 ag 77
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 31412106 atgatggagacggcggcggcggcgatgctggagaccggggtggagaggttccgggggccg 31412165 Query: 162 ag 163 || Sbjct: 31412166 ag 31412167 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||||||||||||||||||||| Sbjct: 30712252 tctccctctcttcgtcttcctcctccca 30712225 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 gcggccgcggcgacgatgctgg 132 |||||||||||||||||||||| Sbjct: 15974335 gcggccgcggcgacgatgctgg 15974356
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 83694 atgatggagacggcggcggcggcgatgctggagaccggggtggagaggttccgggggccg 83635 Query: 162 ag 163 || Sbjct: 83634 ag 83633
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 102 atgatggatgcggccgcggcgacgatgctggaggccggggtggggcggttccgggggccg 161 |||||||| |||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 31502622 atgatggagacggcggcggcggcgatgctggagaccggggtggagaggttccgggggccg 31502681 Query: 162 ag 163 || Sbjct: 31502682 ag 31502683 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||||||||||||||||||||| Sbjct: 30803676 tctccctctcttcgtcttcctcctccca 30803649 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 gcggccgcggcgacgatgctgg 132 |||||||||||||||||||||| Sbjct: 15968869 gcggccgcggcgacgatgctgg 15968890
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||||||||||||||||||||| Sbjct: 91531 tctccctctcttcgtcttcctcctccca 91558
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||||||||||||||||||||| Sbjct: 50138 tctccctctcttcgtcttcctcctccca 50165
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||||||||||||||||||||| Sbjct: 20953 tctccctctcttcgtcttcctcctccca 20926
>gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, complete cds Length = 6755 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||||||||||||||||||||| Sbjct: 737 tctccctctcttcgtcttcctcctccca 710
>gb|AY046056.1| Mus musculus zonadhesin (Zan) gene, complete cds Length = 104241 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtcttcctcctcc 39 |||||||||||||||||| |||||||||||| Sbjct: 44464 cttcttctccctctcttcttcttcctcctcc 44494
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 9 cttcttctccctctcttcgtcttcctcctcc 39 |||||||||||||||||| |||||||||||| Sbjct: 154936 cttcttctccctctcttcttcttcctcctcc 154906
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 9 cttcttctccctctcttcgtcttcctcctcc 39 |||||||||||||||||| |||||||||||| Sbjct: 163114 cttcttctccctctcttcttcttcctcctcc 163084
>gb|AC148018.3| Mus musculus BAC clone RP23-45G4 from 5, complete sequence Length = 234240 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 9 cttcttctccctctcttcgtcttcctcctcc 39 |||||||||||||||||| |||||||||||| Sbjct: 67273 cttcttctccctctcttcttcttcctcctcc 67243
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gctggccgtggcgctggcggcgct 220 |||||||||||||||||||||||| Sbjct: 8582519 gctggccgtggcgctggcggcgct 8582496
>gb|AC115871.8| Mus musculus chromosome 5, clone RP24-343A12, complete sequence Length = 175928 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Plus Query: 14 tctccctctcttcgtcttcctcctccc 40 ||||||||||||| ||||||||||||| Sbjct: 34055 tctccctctcttcctcttcctcctccc 34081
>gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosome 13, complete sequence Length = 200093 Score = 46.1 bits (23), Expect = 0.077 Identities = 29/31 (93%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtcttcctcctcc 39 |||||||||| ||||||| |||||||||||| Sbjct: 349 cttcttctccttctcttcctcttcctcctcc 379
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 cctctcttcgtcttcctcctccc 40 ||||||||||||||||||||||| Sbjct: 51577 cctctcttcgtcttcctcctccc 51599
>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence Length = 248953 Score = 46.1 bits (23), Expect = 0.077 Identities = 29/31 (93%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtcttcctcctcc 39 |||||||||| ||||||| |||||||||||| Sbjct: 191787 cttcttctccttctcttcctcttcctcctcc 191817
>dbj|AK069711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033B12, full insert sequence Length = 1575 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 cctctcttcgtcttcctcctccc 40 ||||||||||||||||||||||| Sbjct: 56 cctctcttcgtcttcctcctccc 78
>gb|AY484493.1| Vigna unguiculata chloroplast stromal ascorbate peroxidase mRNA, complete cds; nuclear gene for chloroplast product Length = 1505 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtcttcctcctc 38 |||||||||||||||||| ||||| ||||| Sbjct: 129 cttcttctccctctcttcctcttcttcctc 158
>gb|AY484492.1| Vigna unguiculata chloroplast thylakoid-bound ascorbate peroxidase mRNA, complete cds; nuclear gene for chloroplast product Length = 1354 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtcttcctcctc 38 |||||||||||||||||| ||||| ||||| Sbjct: 129 cttcttctccctctcttcctcttcttcctc 158
>ref|XM_470885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 843 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 gcggccgcggcgacgatgctgg 132 |||||||||||||||||||||| Sbjct: 25 gcggccgcggcgacgatgctgg 46
>gb|AC166646.4| Mus musculus chromosome 3, clone RP24-400P18, complete sequence Length = 176864 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 tctccctctcttcgtcttcctcctcc 39 ||||||||||||| |||||||||||| Sbjct: 66933 tctccctctcttcttcttcctcctcc 66958
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 gcggccgcggcgacgatgctgg 132 |||||||||||||||||||||| Sbjct: 76082 gcggccgcggcgacgatgctgg 76061
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 125490 acgaggccgactccgacggcgacggc 125465
>gb|AC162872.9| Mus musculus chromosome 3, clone RP24-346J6, complete sequence Length = 147221 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 tctccctctcttcgtcttcctcctcc 39 ||||||||||||| |||||||||||| Sbjct: 131204 tctccctctcttcttcttcctcctcc 131179
>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence Length = 162574 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ctccctctcttcgtcttcctcc 36 |||||||||||||||||||||| Sbjct: 141848 ctccctctcttcgtcttcctcc 141869
>gb|AC107613.15| Homo sapiens X BAC RP11-501H19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132501 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 tctcttcgtcttcctcctcccattct 45 ||||||||||||||||||||| |||| Sbjct: 75001 tctcttcgtcttcctcctccctttct 75026
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 gcctcgcggcgctgctggcggagatg 188 ||||||||||||||||| |||||||| Sbjct: 4260040 gcctcgcggcgctgctgtcggagatg 4260065
>dbj|AK119956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C10, full insert sequence Length = 993 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 628 acgaggccgactccgacggcgacggc 653
>dbj|AK111834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133G18, full insert sequence Length = 1384 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 630 acgaggccgactccgacggcgacggc 655
>emb|CT737142.2| CH251-5K7, complete sequence Length = 178798 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 tctcttcgtcttcctcctcccattct 45 ||||||||||||||||||||| |||| Sbjct: 143731 tctcttcgtcttcctcctccctttct 143756
>emb|CT033850.3| RP43-011K05, complete sequence Length = 158402 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 tctcttcgtcttcctcctcccattct 45 ||||||||||||||||||||| |||| Sbjct: 143389 tctcttcgtcttcctcctccctttct 143414
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 acgagtccgactccgacggcgacggc 359 ||||| |||||||||||||||||||| Sbjct: 65874 acgaggccgactccgacggcgacggc 65899
>ref|XM_511427.1| PREDICTED: Pan troglodytes similar to apoptosis antagonizing transcription factor (LOC454601), mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 887 ctctcttcgtcttcctcctcc 867
>ref|XM_523901.1| PREDICTED: Pan troglodytes UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 6 (LOC468512), mRNA Length = 1305 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 216 cttcttctccctctcttcgtc 236
>ref|NM_012138.3| Homo sapiens apoptosis antagonizing transcription factor (AATF), mRNA Length = 2172 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 784 ctctcttcgtcttcctcctcc 764
>gb|BC069620.1| Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6, mRNA (cDNA clone MGC:97155 IMAGE:7262397), complete cds Length = 1239 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 138 cttcttctccctctcttcgtc 158
>gb|BC074884.2| Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6, mRNA (cDNA clone MGC:104029 IMAGE:30915473), complete cds Length = 1198 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 78 cttcttctccctctcttcgtc 98
>gb|BC074835.2| Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6, mRNA (cDNA clone MGC:103934 IMAGE:30915327), complete cds Length = 1198 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 78 cttcttctccctctcttcgtc 98
>gb|BC000591.2| Homo sapiens apoptosis antagonizing transcription factor, mRNA (cDNA clone MGC:815 IMAGE:3346769), complete cds Length = 2052 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 664 ctctcttcgtcttcctcctcc 644
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 tcgcggcgctgctggcggaga 186 ||||||||||||||||||||| Sbjct: 3512819 tcgcggcgctgctggcggaga 3512799
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 acttcttctccctctcttcgtcttcctcc 36 ||||||||||| ||||||| ||||||||| Sbjct: 21726 acttcttctccatctcttcctcttcctcc 21754
>gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome 19, complete sequence Length = 202236 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ttctccctctcttcgtcttcctcct 37 |||||||||||||| |||||||||| Sbjct: 112408 ttctccctctcttcttcttcctcct 112432
>emb|CR954192.2| Medicago truncatula chromosome 5 clone mth2-15h3, COMPLETE SEQUENCE Length = 118151 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ctcttcgtcttcctcctcccattct 45 |||||||||||||||| |||||||| Sbjct: 63032 ctcttcgtcttcctccacccattct 63056
>emb|AL365180.13| Human DNA sequence from clone RP13-212J24 on chromosome 10, complete sequence Length = 49768 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 tcttctccctctcttcgtcttcctcctcc 39 ||||||||||||| || |||||||||||| Sbjct: 15516 tcttctccctctcctcctcttcctcctcc 15488
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ggccgtggcgctggcggcgct 220 ||||||||||||||||||||| Sbjct: 304645 ggccgtggcgctggcggcgct 304665
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ggccgtggcgctggcggcgct 220 ||||||||||||||||||||| Sbjct: 212489 ggccgtggcgctggcggcgct 212509
>emb|AL671969.39| Mouse DNA sequence from clone RP23-339O7 on chromosome 11 Contains part of a novel gene and the Nmu2r gene for neuromedin U receptor 2, complete sequence Length = 118473 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ctccctctcttcgtcttcctcctcc 39 |||||||||||| |||||||||||| Sbjct: 109379 ctccctctcttcatcttcctcctcc 109355
>emb|AL590626.9| Mouse DNA sequence from clone RP23-143O13 on chromosome 13 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 179282 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 tcttctccctctcttcgtcttcctcctcc 39 |||||||| ||||||| |||||||||||| Sbjct: 129500 tcttctccttctcttcctcttcctcctcc 129528
>emb|CR616929.1| full-length cDNA clone CS0DK006YO03 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 2028 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 698 ctctcttcgtcttcctcctcc 678
>dbj|AK057229.1| Homo sapiens cDNA FLJ32667 fis, clone TESTI1000101, highly similar to Homo sapiens mRNA for Ded protein (ded gene) Length = 2140 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 784 ctctcttcgtcttcctcctcc 764
>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence Length = 135692 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 81861 ctctcttcgtcttcctcctcc 81881
>gb|AC017100.4| Homo sapiens BAC clone RP11-549B18 from 18, complete sequence Length = 202950 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 51161 cttcttctccctctcttcgtc 51181
>gb|AC154629.2| Mus musculus BAC clone RP23-313M15 from chromosome 16, complete sequence Length = 147288 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctccctctcttcgtcttcctcctcc 39 |||||||||||| |||||||||||| Sbjct: 114686 ctccctctcttcttcttcctcctcc 114710
>gb|AF083208.1|AF083208 Homo sapiens Che-1 mRNA, complete cds Length = 2023 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 701 ctctcttcgtcttcctcctcc 681
>gb|AC128708.8| Homo sapiens 12 BAC RP11-714L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102748 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 tcttctccctctcttcgtcttcctcctcc 39 |||||||| ||||||| |||||||||||| Sbjct: 7156 tcttctccttctcttcctcttcctcctcc 7128
>gb|AC174480.1| Mus musculus BAC clone RP23-154N2 from chromosome 1, complete sequence Length = 207205 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 tcttctccctctcttcgtcttcctcctcc 39 |||||||| ||||||| |||||||||||| Sbjct: 29629 tcttctccttctcttcatcttcctcctcc 29657
>dbj|AK026173.1| Homo sapiens cDNA: FLJ22520 fis, clone HRC12241, highly similar to HSA249940 Homo sapiens mRNA for Ded protein (ded gene) Length = 1588 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 210 ctctcttcgtcttcctcctcc 190
>dbj|AK108908.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-G05, full insert sequence Length = 925 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 cgctggccgtggcgctggcgg 216 ||||||||||||||||||||| Sbjct: 266 cgctggccgtggcgctggcgg 286
>gb|AF097159.1|AF097159 Homo sapiens UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase mRNA, complete cds Length = 3931 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 357 cttcttctccctctcttcgtc 377
>emb|AJ249940.2|HSA249940 Homo sapiens mRNA for Ded protein (ded gene) Length = 2008 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctcc 39 ||||||||||||||||||||| Sbjct: 639 ctctcttcgtcttcctcctcc 619
>gb|BC069642.1| Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6, mRNA (cDNA clone MGC:97220 IMAGE:7262468), complete cds Length = 1355 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 137 cttcttctccctctcttcgtc 157
>gb|AC005878.3|AC005878 citb_255_f_20, complete sequence Length = 148852 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 tcttctccctctcttcgtcttcctcctcc 39 ||||||||||||| || |||||||||||| Sbjct: 36233 tcttctccctctcctcctcttcctcctcc 36261
>gb|AC126797.4| Mus musculus BAC clone RP23-443F6 from 1, complete sequence Length = 192663 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 tcttctccctctcttcgtcttcctcctcc 39 |||||||| ||||||| |||||||||||| Sbjct: 149397 tcttctccttctcttcatcttcctcctcc 149425
>emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 in linkage group 11, complete sequence Length = 138432 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 tctccctctcttcgtcttcct 34 ||||||||||||||||||||| Sbjct: 49939 tctccctctcttcgtcttcct 49959
>gb|AC106833.10| Mus musculus chromosome 19, clone RP24-503K22, complete sequence Length = 180887 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctccctctcttcgtcttcctcctcc 39 |||||||||||| |||||||||||| Sbjct: 104639 ctccctctcttcctcttcctcctcc 104663
>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete sequence Length = 255261 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 ttcttctccctctcttcgtcttcctcctc 38 ||||||| ||||||||| ||||||||||| Sbjct: 170307 ttcttcttcctctcttcctcttcctcctc 170279
>dbj|AB024742.2| Homo sapiens mRNA for beta-1,4-galactosyl transferase VI, complete cds Length = 1177 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cttcttctccctctcttcgtc 29 ||||||||||||||||||||| Sbjct: 66 cttcttctccctctcttcgtc 86
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cgctggccgtggcgctggcg 215 |||||||||||||||||||| Sbjct: 69991 cgctggccgtggcgctggcg 70010
>gb|AY639386.1| Streptomyces nodosus oxidoreductase, regulatory protein, hypothetical protein, methyltransferase, transcriptional regulator, AmphRI, AmphRII, AmphRIII, AmphRIV, LysR-type transcriptional regulator, 3-ketoacyl CoA thiolase, CoA transferase subunit A, and CoA transferase subunit B genes, complete cds Length = 20832 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcctcgcggcgctgctggcg 182 |||||||||||||||||||| Sbjct: 19560 gcctcgcggcgctgctggcg 19579
>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete sequence Length = 136974 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 ttctccctctcttcgtcttcctcctccc 40 ||||||||||| || ||||||||||||| Sbjct: 38660 ttctccctctcctcttcttcctcctccc 38687
>ref|XM_475168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 606 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgactccgacggcgacggc 359 |||||||||||||||||||| Sbjct: 296 ccgactccgacggcgacggc 315
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cggcgctcgcgacgctgcccagcctgct 241 ||||||||||||||||| || ||||||| Sbjct: 1980223 cggcgctcgcgacgctggccggcctgct 1980250
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 40.1 bits (20), Expect = 4.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 9 cttcttctccctct-cttcgtcttcctcctcc 39 |||||||||||||| |||| |||||||||||| Sbjct: 43134 cttcttctccctcttcttcctcttcctcctcc 43165
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gctggccgtggcgctggcgg 216 |||||||||||||||||||| Sbjct: 4330083 gctggccgtggcgctggcgg 4330102
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ggcgctggcggcgctcgcga 225 |||||||||||||||||||| Sbjct: 2507529 ggcgctggcggcgctcgcga 2507548
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 gctggccgtggcgctggcggcgctcgcg 224 |||||||| |||| |||||||||||||| Sbjct: 1800568 gctggccgcggcggtggcggcgctcgcg 1800595
>ref|NM_009623.1| Mus musculus adenylate cyclase 8 (Adcy8), mRNA Length = 4901 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 2243 gctgcaggtgctcatcctcc 2224
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 205 tggcgctggcggcgctcgcgacgctgcc 232 |||| ||| ||||||||||||||||||| Sbjct: 1117433 tggccctgccggcgctcgcgacgctgcc 1117406
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcgctggcggcgctcgcga 225 |||||||||||||||||||| Sbjct: 3677147 ggcgctggcggcgctcgcga 3677128
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ccgactccgacggcgacggc 359 |||||||||||||||||||| Sbjct: 56021 ccgactccgacggcgacggc 56002
>gb|BC094231.1| Mus musculus adenylate cyclase 8, mRNA (cDNA clone IMAGE:30535346) Length = 4502 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 1821 gctgcaggtgctcatcctcc 1802
>gb|AC122501.3| Mus musculus BAC clone RP24-410D23 from chromosome 18, complete sequence Length = 153867 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gtcttcctcctcccattctc 46 |||||||||||||||||||| Sbjct: 119461 gtcttcctcctcccattctc 119480
>ref|XM_803117.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504009.60) partial mRNA Length = 3405 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctc 38 |||||||||||||||||||| Sbjct: 1919 ctctcttcgtcttcctcctc 1900
>gb|AC132455.3| Mus musculus BAC clone RP23-129K10 from chromosome 17, complete sequence Length = 210538 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 cttctccctctcttcgtcttcctcctcc 39 |||||| |||||||| |||||||||||| Sbjct: 209718 cttctctctctcttcctcttcctcctcc 209745
>ref|XM_811341.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507049.179) partial mRNA Length = 3402 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ctctcttcgtcttcctcctc 38 |||||||||||||||||||| Sbjct: 1916 ctctcttcgtcttcctcctc 1897
>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence Length = 229669 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 113710 gctgcaggtgctcatcctcc 113729
>ref|XM_537000.2| PREDICTED: Canis familiaris similar to 3-phosphoinositide dependent protein kinase-1 (hPDK1) (LOC479875), mRNA Length = 1683 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcttcgtcttcctcctccca 41 |||||||||||||||||||| Sbjct: 1177 tcttcgtcttcctcctccca 1196
>gb|M64552.3|STMXLNB Streptomyces lividans acetyl-xylan esterase (axeA) and xylanase B (xlnB) genes, complete cds and ribonuclease P RNA component (rnpB) gene, complete sequence Length = 4398 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 ggccgtggcgctggcggcgctcgc 223 |||||| ||||||||||||||||| Sbjct: 2250 ggccgtcgcgctggcggcgctcgc 2273
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctccctctcttcgtcttcctcctc 38 |||||||||||| ||||||||||| Sbjct: 174361 ctccctctcttcttcttcctcctc 174338
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ctggccgtggcgctggcggc 217 |||||||||||||||||||| Sbjct: 4807596 ctggccgtggcgctggcggc 4807577
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 cgtggcgctggcggcgctcgcgacgctg 230 |||||||||||||||||| | ||||||| Sbjct: 1606730 cgtggcgctggcggcgctggagacgctg 1606703
>emb|AL136532.22| Human DNA sequence from clone RP11-379F14 on chromosome 20 Contains the MRPS16P gene for mitochondrial ribosomal protein S16 pseudogene, complete sequence Length = 94387 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 9 cttcttctccctctcttcgtcttcctcctccc 40 |||||||||| || |||| ||||||||||||| Sbjct: 33423 cttcttctccttcccttcctcttcctcctccc 33392
>ref|XM_794811.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC576490 (LOC576490), mRNA Length = 858 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctccctctcttcgtcttcctcctc 38 |||||| ||||||||||||||||| Sbjct: 405 ctccctatcttcgtcttcctcctc 382
>gb|AC161447.6| Mus musculus BAC clone RP24-333C14 from chromosome 17, complete sequence Length = 182569 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tacttcttctccctctcttc 26 |||||||||||||||||||| Sbjct: 149451 tacttcttctccctctcttc 149432
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 gctggccgtggcgctggcggcgctcgcg 224 |||||||| |||| |||||||||||||| Sbjct: 78404 gctggccgcggcggtggcggcgctcgcg 78431
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcgctggcggcgctcgcga 225 |||||||||||||||||||| Sbjct: 3418237 ggcgctggcggcgctcgcga 3418218
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 gctggccgtggcgctggcggcgctcgcg 224 |||||||| |||| |||||||||||||| Sbjct: 181027 gctggccgcggcggtggcggcgctcgcg 181054
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 ggccgtggcgctggcggcgctcgc 223 |||||| ||||||||||||||||| Sbjct: 39244 ggccgtcgcgctggcggcgctcgc 39221
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcctcgcggcgctgctggcg 182 |||||||||||||||||||| Sbjct: 155432 gcctcgcggcgctgctggcg 155451
>gb|AC164162.2| Mus musculus BAC clone RP23-253E17 from chromosome 16, complete sequence Length = 174250 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tccctctcttcgtcttcctcctcc 39 ||||||||||| |||||||||||| Sbjct: 129647 tccctctcttcctcttcctcctcc 129670
>dbj|AK138244.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230044D13 product:adenylate cyclase 8, full insert sequence Length = 4574 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 2384 gctgcaggtgctcatcctcc 2365
>dbj|AK163443.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230037C23 product:adenylate cyclase 8, full insert sequence Length = 4234 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 2359 gctgcaggtgctcatcctcc 2340
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgcggcgctgctggcggaga 186 |||||||||||||||||||| Sbjct: 4784184 cgcggcgctgctggcggaga 4784203 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgcggcgctgctggcggaga 186 |||||||||||||||||||| Sbjct: 2444359 cgcggcgctgctggcggaga 2444378 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgcggcgctgctggcggaga 186 |||||||||||||||||||| Sbjct: 2439583 cgcggcgctgctggcggaga 2439564 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgcggcgctgctggcggaga 186 |||||||||||||||||||| Sbjct: 2415940 cgcggcgctgctggcggaga 2415921 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgcggcgctgctggcggaga 186 |||||||||||||||||||| Sbjct: 1027096 cgcggcgctgctggcggaga 1027077 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgcggcgctgctggcggaga 186 |||||||||||||||||||| Sbjct: 589972 cgcggcgctgctggcggaga 589953
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gaggccggggtggggcggtt 151 |||||||||||||||||||| Sbjct: 2938850 gaggccggggtggggcggtt 2938831
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gtggcgctggcggcgctcgc 223 |||||||||||||||||||| Sbjct: 4913372 gtggcgctggcggcgctcgc 4913353 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 158 gccgagcctcgcggcgctgctggcggag 185 ||||||||||||| ||||||||||||| Sbjct: 4184773 gccgagcctcgcgctgctgctggcggag 4184746
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctcttcgtcttcctcctccc 40 |||||||||||||||||||| Sbjct: 30781727 ctcttcgtcttcctcctccc 30781708
>gb|AC097314.27| Homo sapiens X BAC RP11-155F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 80501 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tggaggccggggtggggcgg 149 |||||||||||||||||||| Sbjct: 55820 tggaggccggggtggggcgg 55801
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 ctccctctcttcgtcttcctcctc 38 |||||||||||| ||||||||||| Sbjct: 87088 ctccctctcttcttcttcctcctc 87111
>gb|AC004616.1| Homo sapiens X BAC GSHB-536K7 (Genome Systems Human BAC library) complete sequence Length = 149752 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 ttctccctctcttcgtcttcctcctccc 40 |||||||||||||| | ||||||||||| Sbjct: 117702 ttctccctctcttcttattcctcctccc 117729
>gb|AC127464.3| Ornithorhynchus anatinus clone OA_Bb-383O11, complete sequence Length = 161148 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 ctccctctcttcgtcttcctcctc 38 |||||||||||| ||||||||||| Sbjct: 99387 ctccctctcttcctcttcctcctc 99410
>gb|AC010102.3|AC010102 Homo sapiens BAC clone RP11-486B15 from 2, complete sequence Length = 230827 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 9 cttcttctccctctcttcgtcttcctcctccc 40 |||||||||| || |||| ||||||||||||| Sbjct: 172555 cttcttctccttcccttcctcttcctcctccc 172524
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 ggccgtggcgctggcggcgctcgc 223 ||||| |||||||||||||||||| Sbjct: 2779291 ggccggggcgctggcggcgctcgc 2779268 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ggcgctgctggcggagatgtgggc 193 ||||||||||||||||||| |||| Sbjct: 1710334 ggcgctgctggcggagatgcgggc 1710357 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 192 gcgccgctggccgtggcgctggcggcgctcgc 223 |||||||||| || |||| ||||||||||||| Sbjct: 1447403 gcgccgctgggcgaggcggtggcggcgctcgc 1447372
>gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome 14, complete sequence Length = 236748 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 cttctccctctcttcgtcttcctcctcc 39 ||||||||||||||| || ||||||||| Sbjct: 88081 cttctccctctcttcctcctcctcctcc 88108
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctcttcgtcttcctcctccc 40 |||||||||||||||||||| Sbjct: 121874 ctcttcgtcttcctcctccc 121855
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gcgccgctggccgtggcgctggcg 215 |||| ||||||||||||||||||| Sbjct: 3479615 gcgctgctggccgtggcgctggcg 3479592
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgtcttcctcctcccattctcgc 48 ||||||||||||||||| |||||| Sbjct: 105330 tcgtcttcctcctcccactctcgc 105353
>dbj|AK099962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126K19, full insert sequence Length = 961 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgactccgacggcgacggc 359 |||||||||||||||||||| Sbjct: 396 ccgactccgacggcgacggc 415
>dbj|AK073311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029M14, full insert sequence Length = 1564 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctcttcgtcttcctcctccc 40 |||||||||||||||||||| Sbjct: 107 ctcttcgtcttcctcctccc 88
>dbj|AK067214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097O18, full insert sequence Length = 961 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgactccgacggcgacggc 359 |||||||||||||||||||| Sbjct: 396 ccgactccgacggcgacggc 415
>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence Length = 182058 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 14 tctccctctcttcgtcttcctcctccca 41 |||||||||| || |||||||||||||| Sbjct: 130567 tctccctctcctcctcttcctcctccca 130540
>gb|AC007157.6|AC007157 Homo sapiens, clone hRPK.78_A_1, complete sequence Length = 152937 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 cttctccctctcttcgtcttcctc 35 ||||||||||||||| |||||||| Sbjct: 118394 cttctccctctcttcctcttcctc 118371
>gb|AC107808.20| Mus musculus chromosome 9, clone RP23-61B14, complete sequence Length = 188589 Score = 40.1 bits (20), Expect = 4.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 9 cttcttctccctc-tcttcgtcttcctcctcc 39 ||||||||||||| ||||| |||||||||||| Sbjct: 64701 cttcttctccctcctcttcttcttcctcctcc 64732
>gb|AC110216.10| Mus musculus chromosome 18, clone RP24-502I6, complete sequence Length = 201138 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gtcttcctcctcccattctc 46 |||||||||||||||||||| Sbjct: 152152 gtcttcctcctcccattctc 152133
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gctggccgtggcgctggcgg 216 |||||||||||||||||||| Sbjct: 3651701 gctggccgtggcgctggcgg 3651720
>gb|BC059010.1| Mus musculus cDNA clone IMAGE:6844119, containing frame-shift errors Length = 4149 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 1481 gctgcaggtgctcatcctcc 1462
>gb|AC126694.4| Mus musculus BAC clone RP23-310G20 from 17, complete sequence Length = 232041 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 cttctccctctcttcgtcttcctcctcc 39 |||||| |||||||| |||||||||||| Sbjct: 199241 cttctctctctcttcctcttcctcctcc 199214
>gb|AC132611.3| Mus musculus BAC clone RP23-375I21 from 17, complete sequence Length = 96871 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttctccctctcttcgtcttcctcc 36 |||||||||||||| ||||||||| Sbjct: 94127 ttctccctctcttcctcttcctcc 94150
>emb|CT027693.11| Mouse DNA sequence from clone RP24-120H1 on chromosome 16, complete sequence Length = 186376 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tccctctcttcgtcttcctcctcc 39 ||||||||||| |||||||||||| Sbjct: 140000 tccctctcttcctcttcctcctcc 139977
>gb|AC160934.2| Mus musculus BAC clone RP23-435H22 from chromosome 15, complete sequence Length = 183147 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 25136 gctgcaggtgctcatcctcc 25117
>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence Length = 149387 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 ttctccctctcttcgtcttcctcctccc 40 ||||||||||| || ||||||||||||| Sbjct: 125596 ttctccctctcctcttcttcctcctccc 125623
>gb|U85021.1|MMU85021 Mus musculus adenylyl cyclase type 8 mRNA, complete cds Length = 4901 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgcaggtgctcatcctcc 267 |||||||||||||||||||| Sbjct: 2243 gctgcaggtgctcatcctcc 2224
>gb|AD000019.1|MSGY223 Mycobacterium tuberculosis sequence from clone y223 Length = 42061 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 gctggccgtggcgctggcggcgctcgcg 224 |||||||| |||| |||||||||||||| Sbjct: 29455 gctggccgcggcggtggcggcgctcgcg 29428 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,244,944 Number of Sequences: 3902068 Number of extensions: 3244944 Number of successful extensions: 103528 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 98988 Number of HSP's gapped (non-prelim): 4543 length of query: 359 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 337 effective length of database: 17,147,199,772 effective search space: 5778606323164 effective search space used: 5778606323164 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
