ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.094
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.094
3dbj|AK110901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.094
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.094
5gb|AE009245.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.5
6gb|AE008368.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.5
7gb|AF445424.1| Mycobacterium avium subsp. paratuberculosis clone... 42 1.5
8gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
9gb|AY116644.1| Streptomyces viridifaciens amino acid aminotransf... 42 1.5
10gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
11dbj|AK107024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
12gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.5
13gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, compl... 40 5.8
14ref|NM_001030942.1| Gallus gallus E2F transcription factor 5, p1... 40 5.8
15gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.8
16ref|XM_749152.1| Aspergillus fumigatus Af293 cation transporting... 40 5.8
17emb|CR725899.2|CNS0GN1T Tetraodon nigroviridis full-length cDNA 40 5.8
18emb|CR700566.2|CNS0G3IA Tetraodon nigroviridis full-length cDNA 40 5.8
19emb|CR686065.2|CNS0FSBH Tetraodon nigroviridis full-length cDNA 40 5.8
20emb|CR681956.2|CNS0FP5C Tetraodon nigroviridis full-length cDNA 40 5.8
21emb|AL592503.5| Human DNA sequence from clone RP11-267A5 on chro... 40 5.8
22emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.8
23emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 40 5.8
24emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 5.8
25emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.8
26emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4,... 40 5.8
27emb|AJ720953.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.8
28gb|AE006028.1| Caulobacter crescentus CB15 section 354 of 359 of... 40 5.8
29gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.8
30gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.8
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
33gb|AF218415.1|AF218415 Bradyrhizobium sp. ORS278 geranylgeranyl ... 40 5.8
34dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
35gb|AC158468.2| Postia placenta clone JGIACWS-5B5, complete sequence 40 5.8
36emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.8
37emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.8
38gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.8
39emb|X51734.1|LMDHFR45 Leishmania major DNA for divergent RNA reg... 40 5.8
40dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene clust... 40 5.8 
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0099J16, complete sequence
          Length = 133198

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 284   aaggccgccctcgacgacgcgctggacctcgtcgagtcc 322
             |||| ||||||||||||||||||  | ||||||||||||
Sbjct: 40702 aaggacgccctcgacgacgcgctcaagctcgtcgagtcc 40740
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 284      aaggccgccctcgacgacgcgctggacctcgtcgagtcc 322
                |||| ||||||||||||||||||  | ||||||||||||
Sbjct: 25964264 aaggacgccctcgacgacgcgctcaagctcgtcgagtcc 25964226



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 96       tggcgctgaagatcgccaaggcggtggagacggcccgcgagaacaaggcgatgtgcctgg 155
                ||||| |||||||||||| || || | ||| ||| ||| ||||| || | | ||||||||
Sbjct: 25713808 tggcgatgaagatcgccacggtggcgaagaaggctcgccagaaccagaccaagtgcctgg 25713749

                                 
Query: 156      acctcgccgaccgcgcg 172
                | ||| |||||||||||
Sbjct: 25713748 agctctccgaccgcgcg 25713732
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>dbj|AK110901.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-B02, full
           insert sequence
          Length = 1665

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 284 aaggccgccctcgacgacgcgctggacctcgtcgagtcc 322
           |||| ||||||||||||||||||  | ||||||||||||
Sbjct: 644 aaggacgccctcgacgacgcgctcaagctcgtcgagtcc 682
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 284      aaggccgccctcgacgacgcgctggacctcgtcgagtcc 322
                |||| ||||||||||||||||||  | ||||||||||||
Sbjct: 26282962 aaggacgccctcgacgacgcgctcaagctcgtcgagtcc 26282924



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 96       tggcgctgaagatcgccaaggcggtggagacggcccgcgagaacaaggcgatgtgcctgg 155
                ||||| |||||||||||| || || | ||| ||| ||| ||||| || | | ||||||||
Sbjct: 26032478 tggcgatgaagatcgccacggtggcgaagaaggctcgccagaaccagaccaagtgcctgg 26032419

                                 
Query: 156      acctcgccgaccgcgcg 172
                | ||| |||||||||||
Sbjct: 26032418 agctctccgaccgcgcg 26032402
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>gb|AE009245.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 15 of
            187 of the complete sequence
          Length = 12796

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  gaaggccgccctcgacgacgc 303
            |||||||||||||||||||||
Sbjct: 5299 gaaggccgccctcgacgacgc 5279
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>gb|AE008368.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 172 of
            187 of the complete sequence
          Length = 13928

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 283  gaaggccgccctcgacgacgc 303
            |||||||||||||||||||||
Sbjct: 8630 gaaggccgccctcgacgacgc 8650
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>gb|AF445424.1| Mycobacterium avium subsp. paratuberculosis clone uni5 genomic
           sequence
          Length = 804

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gcagccaggccagccagataa 260
           |||||||||||||||||||||
Sbjct: 653 gcagccaggccagccagataa 673
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>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0039K08, complete sequence
          Length = 122163

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 96    tggcgctgaagatcgccaaggcggtggagacggcccgcgagaacaaggcgatgtgcctgg 155
             ||||| |||||||||||| || || | ||| ||| ||| ||||| || | | ||||||||
Sbjct: 26151 tggcgatgaagatcgccacggtggcgaagaaggctcgccagaaccagaccaagtgcctgg 26092

                              
Query: 156   acctcgccgaccgcgcg 172
             | ||| |||||||||||
Sbjct: 26091 agctctccgaccgcgcg 26075
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>gb|AY116644.1| Streptomyces viridifaciens amino acid aminotransfease gene, partial
            cds; ketol-acid reductioisomerase, acetolactate
            synthetase small subunit, acetolactate synthetase large
            subunit, complete cds; azoxy antibiotic valanimycin gene
            cluster, complete sequence; and putative transferase, and
            putative secreted protein genes, complete cds
          Length = 24613

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 78   tgaacacgatcttcgacgtgg 98
            |||||||||||||||||||||
Sbjct: 8761 tgaacacgatcttcgacgtgg 8741
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 151     cctggacctcgccgaccgcgc 171
               |||||||||||||||||||||
Sbjct: 2700404 cctggacctcgccgaccgcgc 2700424
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>dbj|AK107024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A04, full
           insert sequence
          Length = 1767

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 96  tggcgctgaagatcgccaaggcggtggagacggcccgcgagaacaaggcgatgtgcctgg 155
           ||||| |||||||||||| || || | ||| ||| ||| ||||| || | | ||||||||
Sbjct: 47  tggcgatgaagatcgccacggtggcgaagaaggctcgccagaaccagaccaagtgcctgg 106

                            
Query: 156 acctcgccgaccgcgcg 172
           | ||| |||||||||||
Sbjct: 107 agctctccgaccgcgcg 123
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 240    gcagccaggccagccagataa 260
              |||||||||||||||||||||
Sbjct: 993994 gcagccaggccagccagataa 993974
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>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence
          Length = 40624

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   gccaaggcggtggagacggc 129
             ||||||||||||||||||||
Sbjct: 24714 gccaaggcggtggagacggc 24733
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>ref|NM_001030942.1| Gallus gallus E2F transcription factor 5, p130-binding (E2F5), mRNA
          Length = 3229

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 cggctggcggcggaggcagc 244
           ||||||||||||||||||||
Sbjct: 142 cggctggcggcggaggcagc 161
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 293     ctcgacgacgcgctggacct 312
               ||||||||||||||||||||
Sbjct: 2320028 ctcgacgacgcgctggacct 2320047
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>ref|XM_749152.1| Aspergillus fumigatus Af293 cation transporting ATPase (Afu3g13790)
            partial mRNA
          Length = 3912

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  ccgcgagaacaaggcgatgt 149
            ||||||||||||||||||||
Sbjct: 3588 ccgcgagaacaaggcgatgt 3607
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>emb|CR725899.2|CNS0GN1T Tetraodon nigroviridis full-length cDNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 acatcctgcgccaggaccgc 205
           ||||||||||||||||||||
Sbjct: 414 acatcctgcgccaggaccgc 433
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>emb|CR700566.2|CNS0G3IA Tetraodon nigroviridis full-length cDNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 acatcctgcgccaggaccgc 205
           ||||||||||||||||||||
Sbjct: 428 acatcctgcgccaggaccgc 447
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>emb|CR686065.2|CNS0FSBH Tetraodon nigroviridis full-length cDNA
          Length = 1016

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 acatcctgcgccaggaccgc 205
           ||||||||||||||||||||
Sbjct: 383 acatcctgcgccaggaccgc 402
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>emb|CR681956.2|CNS0FP5C Tetraodon nigroviridis full-length cDNA
          Length = 1076

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 acatcctgcgccaggaccgc 205
           ||||||||||||||||||||
Sbjct: 429 acatcctgcgccaggaccgc 448
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>emb|AL592503.5| Human DNA sequence from clone RP11-267A5 on chromosome 13, complete
             sequence
          Length = 99970

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 386   ttccagctcctccagacgaggatc 409
             ||||||||||| ||||||||||||
Sbjct: 86468 ttccagctccttcagacgaggatc 86445
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cctggacctcgccgaccgcg 170
             ||||||||||||||||||||
Sbjct: 29814 cctggacctcgccgaccgcg 29833
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    cctggacctcgccgaccgcg 170
              ||||||||||||||||||||
Sbjct: 142976 cctggacctcgccgaccgcg 142995
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cctggacctcgccgaccgcg 170
             ||||||||||||||||||||
Sbjct: 97120 cctggacctcgccgaccgcg 97139
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    atcatgacggctggcggcgg 237
              ||||||||||||||||||||
Sbjct: 337373 atcatgacggctggcggcgg 337354
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>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
             complete sequence
          Length = 159502

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggcggcggaggcagccaggc 249
             ||||||||||||||||||||
Sbjct: 81162 ggcggcggaggcagccaggc 81143
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>emb|AJ720953.1| Gallus gallus mRNA for hypothetical protein, clone 30p22
          Length = 3229

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 cggctggcggcggaggcagc 244
           ||||||||||||||||||||
Sbjct: 142 cggctggcggcggaggcagc 161
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>gb|AE006028.1| Caulobacter crescentus CB15 section 354 of 359 of the complete
           genome
          Length = 10598

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 agatcgccaaggcggtggag 124
           ||||||||||||||||||||
Sbjct: 683 agatcgccaaggcggtggag 702
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      ggcgctgaagatcgccaagg 116
               ||||||||||||||||||||
Sbjct: 4212770 ggcgctgaagatcgccaagg 4212789
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 159    tcgccgaccgcgcgagcaccatctgcaa 186
              |||||||||||||| |||||||| ||||
Sbjct: 224009 tcgccgaccgcgcgcgcaccatcggcaa 223982
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 230      ggcggcggaggcagccaggc 249
                ||||||||||||||||||||
Sbjct: 32311579 ggcggcggaggcagccaggc 32311560
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     ggcggcggaggcagccaggc 249
               ||||||||||||||||||||
Sbjct: 1339731 ggcggcggaggcagccaggc 1339712
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>gb|AF218415.1|AF218415 Bradyrhizobium sp. ORS278 geranylgeranyl synthase (crtE), lycopene
            cyclase (crtY), phytoene desaturase (crtI), phytoene
            synthase (crtB), and beta-carotene ketolase (crtW) genes,
            complete cds
          Length = 6635

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggcggtggagacggcccgcg 134
            ||||||||||||||||||||
Sbjct: 4881 ggcggtggagacggcccgcg 4900
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0425F02
          Length = 176979

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggcggcggaggcagccaggc 249
             ||||||||||||||||||||
Sbjct: 48270 ggcggcggaggcagccaggc 48251
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>gb|AC158468.2| Postia placenta clone JGIACWS-5B5, complete sequence
          Length = 36622

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gccgccctcgacgacgcgct 306
             ||||||||||||||||||||
Sbjct: 14444 gccgccctcgacgacgcgct 14463
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>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete
             sequence
          Length = 73187

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggcggcggaggcagccaggc 249
             ||||||||||||||||||||
Sbjct: 26515 ggcggcggaggcagccaggc 26496
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>emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0613A10, complete
             sequence
          Length = 77572

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggcggcggaggcagccaggc 249
             ||||||||||||||||||||
Sbjct: 77407 ggcggcggaggcagccaggc 77388
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 340     catcgagcgggccgtcgcct 359
               ||||||||||||||||||||
Sbjct: 5883726 catcgagcgggccgtcgcct 5883707
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>emb|X51734.1|LMDHFR45 Leishmania major DNA for divergent RNA region upstream of
            dihydrofolate reductase-thymidylate synthase
          Length = 3031

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cgacgtggcgctgaagatcg 110
            ||||||||||||||||||||
Sbjct: 1186 cgacgtggcgctgaagatcg 1205
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>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds,
             stain:IL144
          Length = 58996

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    ggcgctgaagatcgccaaggcggt 120
             ||||||| ||||||||||||||||
Sbjct: 51224 ggcgctgcagatcgccaaggcggt 51201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,662,104
Number of Sequences: 3902068
Number of extensions: 2662104
Number of successful extensions: 64365
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63508
Number of HSP's gapped (non-prelim): 857
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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