ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59d02 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 212 bits (540), Expect = 3e-55 Identities = 106/126 (84%), Positives = 106/126 (84%) Frame = +3 Query: 42 MAPLPPWRPACLLPLLSVVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDSGMY 221 MAPL RPACLL LLSV GGKTGQVTVFWGRNKAEGSLREACDSGMY Sbjct: 1 MAPLAARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMY 60 Query: 222 TMVTMSFLDVFGAXGKYHLDLSGHDLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSXR 401 TMVTMSFLDVFGA GKYHLDLSGHDLSSVGADIKHCQ KGVPVSLSIGGYGTGYSLPS R Sbjct: 61 TMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIGGYGTGYSLPSNR 120 Query: 402 SALDLF 419 SALDLF Sbjct: 121 SALDLF 126
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 129 bits (325), Expect = 2e-30 Identities = 65/118 (55%), Positives = 80/118 (67%) Frame = +3 Query: 63 RPACLLPLLSVVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSF 242 R + L+PL V+ GKTGQ+TVFWGRNK EG+L+E CD+G+YT V +SF Sbjct: 6 RRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISF 65 Query: 243 LDVFGAXGKYHLDLSGHDLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSALDL 416 VFG G+Y DLSGHDL +GADIKHCQ K + V LSIGG G YSLP+ +SA D+ Sbjct: 66 YSVFG-HGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADV 122
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 113 bits (282), Expect = 2e-25 Identities = 53/88 (60%), Positives = 68/88 (77%) Frame = +3 Query: 153 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGHDLSSVGADIKHCQ 332 + V+WGR+K EGSLREACD+G YT V ++F + FG G+Y LD+SGH L++VGADIKHCQ Sbjct: 32 LAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFG-HGRYSLDISGHPLAAVGADIKHCQ 90 Query: 333 FKGVPVSLSIGGYGTGYSLPSXRSALDL 416 +G+ V LSIGG G YSLP+ SA D+ Sbjct: 91 SRGITVLLSIGGQGGAYSLPTNASAADV 118
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 74.3 bits (181), Expect = 1e-13 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%) Frame = +3 Query: 150 QVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGH-----DLSSVGA 314 Q+ ++WG+N EGSL + C+SG Y V ++F+ FG L+L+GH + +S+ + Sbjct: 27 QIVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPATNCNSLSS 86 Query: 315 DIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 DIK CQ G+ V LSIGG GYSL S A Sbjct: 87 DIKTCQQAGIKVLLSIGGGAGGYSLSSTDDA 117
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 71.6 bits (174), Expect = 7e-13 Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 6/131 (4%) Frame = +3 Query: 33 KPKMAPLPPWRPACLLPLLSVVXXXXXXXXXXXXGGKTGQVTVFWGRNKAEGSLREACDS 212 KP MA L A LLPLL + G ++V+WG+N EGSL +AC++ Sbjct: 2 KPNMACLKQVS-ALLLPLLFI---------SFFKPSHAGGISVYWGQNGNEGSLADACNT 51 Query: 213 GMYTMVTMSFLDVFGAXGKYHLDLSGHDLSSV------GADIKHCQFKGVPVSLSIGGYG 374 G Y V ++FL FG L+L+GH S+ IK CQ K + V LS+GG Sbjct: 52 GNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGAS 111 Query: 375 TGYSLPSXRSA 407 YSL S A Sbjct: 112 GSYSLTSADDA 122
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 71.6 bits (174), Expect = 7e-13 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 6/93 (6%) Frame = +3 Query: 147 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGH------DLSSV 308 G + ++WG+N EG+L + C++G Y+ V ++FL+ FG ++L+GH +SV Sbjct: 26 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSV 85 Query: 309 GADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 I++CQ +G+ V LSIGG YSL S A Sbjct: 86 STGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDA 118
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 70.5 bits (171), Expect = 2e-12 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%) Frame = +3 Query: 141 KTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGHDLSSVGA-- 314 K G + V+WG++ EG L + C+SG+Y +V ++FL FG L+L+GH S G Sbjct: 23 KAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQ 82 Query: 315 ----DIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 I+HCQ G+ + LSIGG Y+L S A Sbjct: 83 QLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDA 117
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 69.3 bits (168), Expect = 3e-12 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 6/94 (6%) Frame = +3 Query: 153 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGH-DLSSVGA----- 314 + V+WG+N EGSL++AC++ Y V ++FL FG ++L+GH D S+ G Sbjct: 26 IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSP 85 Query: 315 DIKHCQFKGVPVSLSIGGYGTGYSLPSXRSALDL 416 +I+ CQ KG+ V LS+GG YSL S A L Sbjct: 86 EIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTL 119
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 67.0 bits (162), Expect = 2e-11 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 6/95 (6%) Frame = +3 Query: 141 KTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGHDLSSVGA-- 314 + G + ++WG+N EGSL + C + Y +V ++FL VFG L+L+GH + GA Sbjct: 21 EAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACT 80 Query: 315 ----DIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 DI+ CQ +G+ V LS+GG Y L S A Sbjct: 81 GLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDA 115
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 63.9 bits (154), Expect = 1e-10 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%) Frame = +3 Query: 147 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGH------DLSSV 308 G + ++WG+N EG+L C +G Y V ++FL FG L+L+GH + Sbjct: 30 GGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHF 89 Query: 309 GADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 G+ +K CQ +G+ V LS+GG YS+ S A Sbjct: 90 GSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDA 122
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 61.2 bits (147), Expect = 9e-10 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 6/93 (6%) Frame = +3 Query: 147 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGHDLSSVGA---- 314 G + ++WG+N EG+L + C + Y+ V ++FL+ FG ++L+GH + G Sbjct: 27 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 86 Query: 315 --DIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 I+ CQ +G+ V LS+GG Y+L S A Sbjct: 87 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADA 119
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 59.7 bits (143), Expect = 3e-09 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 6/91 (6%) Frame = +3 Query: 153 VTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGH------DLSSVGA 314 + ++WG+N EGSL C +G Y V ++FL FG+ L+L+GH + + Sbjct: 28 IAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSD 87 Query: 315 DIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 +I C+ + V V LSIGG YSL S A Sbjct: 88 EINSCKSQNVKVLLSIGGGAGSYSLSSADDA 118
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 58.2 bits (139), Expect = 8e-09 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 17/98 (17%) Frame = +3 Query: 153 VTVFWGRNKAEGSLREA-----CDSGMYTMVTMSFLDVFGAXGKYHLDLSGH-------- 293 V +WG+N A GS +A C+SG V +SFL VF G ++LS Sbjct: 31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPN 90 Query: 294 ----DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPS 395 +VGADIK CQ KGV V LS+GG Y S Sbjct: 91 TQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTS 128
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 57.4 bits (137), Expect = 1e-08 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 17/98 (17%) Frame = +3 Query: 153 VTVFWGRNKAEGSLREA-----CDSGMYTMVTMSFLDVFGAXGKYHLDLSGH-------- 293 V +WG+N A GS +A C+SG V +SFL VF G ++LS Sbjct: 31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPN 90 Query: 294 ----DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPS 395 +VGADIK CQ KGV V LS+GG Y S Sbjct: 91 TQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTS 128
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 55.1 bits (131), Expect = 7e-08 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 8/97 (8%) Frame = +3 Query: 150 QVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGAX-GKYHLDLSGHDLSSVG----- 311 ++ V+WG+ + +G LR+ C + Y +V +SFLD FG K L+L G SVG Sbjct: 31 EIAVYWGQRE-DGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSF 89 Query: 312 --ADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSALDL 416 + IK CQ GV V L++GG YS S A DL Sbjct: 90 LESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDL 126
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 52.4 bits (124), Expect = 4e-07 Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 17/98 (17%) Frame = +3 Query: 153 VTVFWGRNKA-----EGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGH-------- 293 V +WG+N A +GSL C SG ++ +SFL+ F G ++L+ Sbjct: 29 VMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFFPN 88 Query: 294 ----DLSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPS 395 +VG+DIK CQ GV V LS+GG Y S Sbjct: 89 TNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGSYGFSS 126
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 43.9 bits (102), Expect = 2e-04 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 11/97 (11%) Frame = +3 Query: 153 VTVFWGRNKA--EGSLREACDSGMYTMVTMSFLDVFG---------AXGKYHLDLSGHDL 299 + +WG+N + +L + C S +++ +SFLD F G + L+ Sbjct: 20 IAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPNLSLNFANQCSGTFSSGLA--HC 77 Query: 300 SSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSAL 410 S +G+DIK CQ +G + LS+GG Y S A+ Sbjct: 78 SQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAV 114
>CHLY_PARTH (P23473) Bifunctional chitinase/lysozyme [Includes: Chitinase (EC| 3.2.1.14); Lysozyme (EC 3.2.1.17)] (Fragment) Length = 47 Score = 43.1 bits (100), Expect = 3e-04 Identities = 15/37 (40%), Positives = 27/37 (72%) Frame = +3 Query: 147 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFG 257 G + ++WG+N EG+L + C++G Y+ V ++FL+ FG Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFG 37
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 42.7 bits (99), Expect = 3e-04 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 10/98 (10%) Frame = +3 Query: 144 TGQVTVFWGRNKAEGSLREA--CDSGMYTMVTMSFLDVF-GAXGKYHLDLSGHDLSS--- 305 + QV ++WG+N A G R A C +V +SFL++F + G+ S Sbjct: 22 SNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLNVNFANQCGNTFESGLL 81 Query: 306 ----VGADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 +GADIK CQ G V LS+GG Y SA Sbjct: 82 HCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASA 119
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 40.0 bits (92), Expect = 0.002 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 12/97 (12%) Frame = +3 Query: 153 VTVFWGRNKAEGSLREA--CDSGMYTMVTMSFLDVF----------GAXGKYHLDLSGHD 296 V V+WG+N R + CDS +V +SF+ F G Y + Sbjct: 25 VAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFMHQFPSPIQLNFANACEGTYTAN-GILQ 83 Query: 297 LSSVGADIKHCQFKGVPVSLSIGGYGTGYSLPSXRSA 407 ++ DIK+CQ KG + LS+GG Y +A Sbjct: 84 CQTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATA 120
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 38.9 bits (89), Expect = 0.005 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%) Frame = +3 Query: 153 VTVFWGRNKA--EGSLREACDSGMYTMVTMSFLDVFGAXGKYHLDLSGHDLSS------- 305 + V+WG+N A + SL C+S + +SFL+ F G + S Sbjct: 29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFPTLGLNFANACSDTFSDGLLHCTQ 88 Query: 306 VGADIKHCQFKGVPVSLSIGGYGTGY 383 + DI+ CQ G V LS+GG Y Sbjct: 89 IAEDIETCQSLGKKVLLSLGGASGSY 114
>RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 981 Score = 31.2 bits (69), Expect = 1.0 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Frame = -1 Query: 310 PTEDRSWPERSRWYLPXAPKTSRKDMVTMVYMPESQASRRD--PSALFRPQNTVTWPVFP 137 PT DRS P R+R LP +R + E A+ RD P P +V+ V P Sbjct: 896 PTGDRSAPRRARTALPGVDGHTRCTRRSDRGPGERDANVRDKRPRRSMPPSRSVS-SVPP 954 Query: 136 PAAKAGGV---RNKAATTERRGRR 74 P++ GG R + A RR RR Sbjct: 955 PSSSGGGADGDRVEGAARPRRQRR 978
>TGT_THET8 (Q5SLI7) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 385 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 220 YMPESQASRRDPSALFRPQNTVTWPVFPPAAKAGGVR 110 + E++A R LF P V P+F P AG V+ Sbjct: 6 FQVEARAGRARVGRLFTPHGAVETPLFMPVGTAGSVK 42
>TGT_THET2 (Q72H19) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 385 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 220 YMPESQASRRDPSALFRPQNTVTWPVFPPAAKAGGVR 110 + E++A R LF P V P+F P AG V+ Sbjct: 6 FQVEARAGRARVGRLFTPHGAVETPLFMPVGTAGSVK 42
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -1 Query: 148 PVFPPAAKAGGVRNKAATTERRGRRHAGLQGGSG 47 P PPA +G + TER G+ AG GG G Sbjct: 638 PGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQG 671
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -1 Query: 148 PVFPPAAKAGGVRNKAATTERRGRRHAGLQGGSG 47 P PPA +G + TER G+ AG GG G Sbjct: 646 PGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQG 679
>JIL1_DROME (Q9V3I5) Chromosomal serine/threonine-protein kinase JIL-1 (EC| 2.7.11.1) Length = 1207 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 Query: 289 PERSRWYLPXAPKTSRKDMVTMVYMPESQASRRDPSALFRPQNTVTW 149 PE R Y+P P + T P ++ RR S L +P + T+ Sbjct: 1012 PEEDRQYIPPPPALIPVEPETTFRRPRTRQQRRTESQLVQPVSVATY 1058
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -1 Query: 190 DPSALFRPQNTVTWPVFPPAAKAGG--VRNKAATTERRGRRHAGLQ 59 D S P TVT PPA+ GG + TER RH+GLQ Sbjct: 365 DNSPQQAPTPTVTTTGNPPASNTGGTDASPRLNWTERGETRHSGLQ 410
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -1 Query: 190 DPSALFRPQNTVTWPVFPPAAKAGG--VRNKAATTERRGRRHAGLQ 59 D S P TVT PPA+ GG + TER RH+GLQ Sbjct: 365 DNSPQQAPTPTVTTTGNPPASNTGGTDASPRLNWTERGETRHSGLQ 410
>E1BL_ADECT (P14266) E1B protein, large T-antigen (Early E1B 55 kDa protein)| Length = 444 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 Query: 312 ADIKHCQFKGVPVSLSIGGYGT 377 A I HC FK S+ +GG GT Sbjct: 265 ASISHCMFKDCTCSIMLGGQGT 286 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,581,301 Number of Sequences: 219361 Number of extensions: 706819 Number of successful extensions: 3003 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2982 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
