ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59d02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene) Length = 915 Score = 517 bits (261), Expect = e-144 Identities = 348/380 (91%) Strand = Plus / Plus Query: 42 atggcgccgctcccaccctggaggccagcgtgcctcctacccctcctctccgtcgtcgct 101 |||||||||||| || || |||||||||| |||||||| ||||||||||||||| ||| Sbjct: 1 atggcgccgctcgcagcccggaggccagcctgcctcctggccctcctctccgtcgccgcg 60 Query: 102 gccttattcctaaccccgccggccttggcggcnnnnnnnaagaccggccaggtgacggtg 161 ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 61 gccttattcctgaccccgacggccttggcggcggggggaaagaccggccaggtgacggtg 120 Query: 162 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 221 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 121 ttctggggacggaacaaggccgagggctccctgcgtgaggcctgcgactccggtatgtac 180 Query: 222 accatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctcgac 281 |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| Sbjct: 181 accatggtcaccatgtccttgctcgacgtcttcggcgccaacggcaagtaccacctcgac 240 Query: 282 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 341 ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 241 ctctccggccatgacctctcctccgtcggcgccgacatcaagcactgccagtccaagggc 300 Query: 342 gtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccnaccga 401 ||||| ||||||||||||||||||||||||||||||||||||||||| || ||| |||| Sbjct: 301 gtccctgtctccctctccatcggcggctacggcaccggctactcgctgccgtccaaccgc 360 Query: 402 tcggcgctcgacctcttcga 421 || ||||||||||||||||| Sbjct: 361 tccgcgctcgacctcttcga 380
>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III, complete cds Length = 934 Score = 444 bits (224), Expect = e-121 Identities = 351/394 (89%), Gaps = 6/394 (1%) Strand = Plus / Plus Query: 31 agaaaccaaaaatggcgccgctcccaccctggaggccagcg---tgcctcctacccctcc 87 ||||||||| ||||||||||||| ||||| |||||||||| |||||||| |||| | Sbjct: 4 agaaaccaacaatggcgccgctcgcacccgggaggccagcagcctgcctcctggcccttc 63 Query: 88 tctccgtcgtcgctgccttattcctaaccccgccggccttggcggcnnnnnnnaagaccg 147 ||||||||||| | || ||| ||| | |||||| ||||||||| ||||||| Sbjct: 64 tctccgtcgtcacggcgctatccctggcggcgccgggcttggcggcgggg---aagaccg 120 Query: 148 gccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcg 207 |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 121 gccaggtgacggtgttctggggccggaacaaggccgaggggtccctgcgcgaggcctgcg 180 Query: 208 actccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgccnacggca 267 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || | Sbjct: 181 actccggcatgtacaccatggtcaccatgtctttcctcgacgtctttggcgccaaaggaa 240 Query: 268 agtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcact 327 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 241 agtaccacctcgacctctccggccacgacctctccgccgtcggcgccgacatcaagcact 300 Query: 328 gccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgc 387 |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 301 gccagtccaagggcgtccccgtctccctctccgttggcggctacggcaccggctactcgc 360 Query: 388 tcccatccnaccgatcggcgctcgacctcttcga 421 |||| ||| |||| || ||||||||||||||||| Sbjct: 361 tcccgtccaaccgctccgcgctcgacctcttcga 394
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 200 bits (101), Expect = 3e-48 Identities = 236/281 (83%), Gaps = 3/281 (1%) Strand = Plus / Minus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 14490753 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 14490694 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgcc 260 |||||||||||||| | ||||||||||||| ||||||||||||| |||| | || Sbjct: 14490693 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgtgtacgga--- 14490637 Query: 261 nacggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatc 320 ||||||||||| ||||||||||||| || ||| | | || | |||||| ||||||| Sbjct: 14490636 cacggcaagtacaacctcgacctctcgggacaccccatagccggcatcggcgacgacatc 14490577 Query: 321 aagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggc 380 |||||||||||||||| |||||||| || || |||||||||||||||| ||||| |||| Sbjct: 14490576 aagcactgccagttcatcggcgtcccggtgtcgctctccatcggcggcttcggcaacggc 14490517 Query: 381 tactcgctcccatccnaccgatcggcgctcgacctcttcga 421 |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 14490516 tactcgctgccgtccaaccgatcggcgctcgagctcttcga 14490476 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| || || |||||||||||||||||||||||||||||| | Sbjct: 11388319 ctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtcc 11388378 Query: 336 aagggcgtccccgtctccctctccatcggcggc 368 | |||| || |||| ||| |||||||||||| Sbjct: 11388379 aggggcatcaccgtgctcctgtccatcggcggc 11388411 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cccctcctctccgtcgtcgctgcc 104 ||||||||||||||||||| |||| Sbjct: 15503978 cccctcctctccgtcgtcgttgcc 15503955
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 200 bits (101), Expect = 3e-48 Identities = 236/281 (83%), Gaps = 3/281 (1%) Strand = Plus / Minus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 83927 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 83868 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgcc 260 |||||||||||||| | ||||||||||||| ||||||||||||| |||| | || Sbjct: 83867 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgtgtacgga--- 83811 Query: 261 nacggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatc 320 ||||||||||| ||||||||||||| || ||| | | || | |||||| ||||||| Sbjct: 83810 cacggcaagtacaacctcgacctctcgggacaccccatagccggcatcggcgacgacatc 83751 Query: 321 aagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggc 380 |||||||||||||||| |||||||| || || |||||||||||||||| ||||| |||| Sbjct: 83750 aagcactgccagttcatcggcgtcccggtgtcgctctccatcggcggcttcggcaacggc 83691 Query: 381 tactcgctcccatccnaccgatcggcgctcgacctcttcga 421 |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 83690 tactcgctgccgtccaaccgatcggcgctcgagctcttcga 83650
>ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 145 bits (73), Expect = 1e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 150 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 209 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 115 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 174 Query: 210 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---cnacggc 266 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 175 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 234 Query: 267 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 326 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 235 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 294 Query: 327 tgccagttcaagggcgtccccgtctccctctccatcggcggc 368 |||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 295 tgccagcgcaagggcgtcctcgtctccctcgccatcggcggc 336
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 145 bits (73), Expect = 1e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 150 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 209 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 26161676 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 26161735 Query: 210 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---cnacggc 266 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 26161736 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 26161795 Query: 267 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 326 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 26161796 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 26161855 Query: 327 tgccagttcaagggcgtccccgtctccctctccatcggcggc 368 |||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 26161856 tgccagcgcaagggcgtcctcgtctccctcgccatcggcggc 26161897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 454178 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 454119 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 454118 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 454063 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 ||||||||||||||||||||||| |||| Sbjct: 7138586 cgtcggcgccgacatcaagcactaccag 7138559 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 319 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggc 368 ||||| |||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 13416986 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcggc 13417035 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 cgtgcctcctacccctcctctccg 93 |||||||||||| ||||||||||| Sbjct: 16993856 cgtgcctcctactcctcctctccg 16993833
>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full insert sequence Length = 1165 Score = 145 bits (73), Expect = 1e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 150 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 209 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 163 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 222 Query: 210 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---cnacggc 266 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 223 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 282 Query: 267 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 326 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 283 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 342 Query: 327 tgccagttcaagggcgtccccgtctccctctccatcggcggc 368 |||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 343 tgccagcgcaagggcgtcctcgtctccctcgccatcggcggc 384
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 145 bits (73), Expect = 1e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 150 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 209 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 53534 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 53593 Query: 210 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---cnacggc 266 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 53594 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 53653 Query: 267 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 326 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 53654 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 53713 Query: 327 tgccagttcaagggcgtccccgtctccctctccatcggcggc 368 |||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 53714 tgccagcgcaagggcgtcctcgtctccctcgccatcggcggc 53755
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 137 bits (69), Expect = 3e-29 Identities = 175/210 (83%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 159 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 218 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 60784 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 60843 Query: 219 tacaccatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctc 278 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 60844 tacacctccgtcatcatctccttcctcgccgtcttcggc---cacggccgctactccctc 60900 Query: 279 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 338 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 60901 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 60960 Query: 339 ggcgtccccgtctccctctccatcggcggc 368 | ||||||| |||||||||||||||| Sbjct: 60961 tacatccccgtgctcctctccatcggcggc 60990 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 75794 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 75853 Query: 364 gcggctacggcaccggctactcgctccc 391 ||||| | ||| ||| ||||||||||| Sbjct: 75854 gcggccagggcggcgggtactcgctccc 75881 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 67353 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 67412 Query: 364 gcggc 368 ||||| Sbjct: 67413 gcggc 67417 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 81639 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 81698 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 81699 gaacatcttcgtcttcctctccatcggcggc 81729 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 87194 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 87135 Query: 338 gggcgtccccgtctccctctccatcggcggctacggc 374 | | |||||||| ||||||| |||||||| ||||| Sbjct: 87134 gaacatccccgtcctcctctccgtcggcggcgacggc 87098 Score = 73.8 bits (37), Expect = 4e-10 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand = Plus / Minus Query: 162 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 221 ||||||||||| || ||||||||||| || || || | |||||||| ||||| ||| Sbjct: 56066 ttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactac 56007 Query: 222 accatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctcgac 281 | ||| |||| ||| ||||||||| |||||| ||| | ||||||||| |||||| Sbjct: 56006 aacatcgtcatcatctccttcctcagcgtcttcggc---catggcaagtactggctcgac 55950 Query: 282 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 341 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 55949 ctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggc 55890 Query: 342 gtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 ||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 55889 gtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 55840 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 51253 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 51194 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 51193 aagggcgtctacatgctcctctccatcggcggcgacggc 51155 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 63722 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 63781 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 63782 caagggcatcgtcgtgctcctctccatcggcggc 63815 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 57862 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 57921 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 || |||| || |||| |||||| ||||||||| Sbjct: 57922 caggggcatcaccgtgctcctctcaatcggcggc 57955 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 84428 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 84369 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 245 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 84368 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 84324 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 |||||||||||||||||||||||||||| Sbjct: 84267 cgtcggcgccgacatcaagcactgccag 84240 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgcca 331 ||||||||||||| ||||||||||||| Sbjct: 88736 cgtcggcgccgacgtcaagcactgcca 88710
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 137 bits (69), Expect = 3e-29 Identities = 175/210 (83%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 159 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 218 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28101517 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28101576 Query: 219 tacaccatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctc 278 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 28101577 tacacctccgtcatcatctccttcctcgccgtcttcggc---cacggccgctactccctc 28101633 Query: 279 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 338 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 28101634 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 28101693 Query: 339 ggcgtccccgtctccctctccatcggcggc 368 | ||||||| |||||||||||||||| Sbjct: 28101694 tacatccccgtgctcctctccatcggcggc 28101723 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28117239 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28117298 Query: 364 gcggctacggcaccggctactcgctccc 391 ||||| | ||| ||| ||||||||||| Sbjct: 28117299 gcggccagggcggcgggtactcgctccc 28117326 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28108798 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28108857 Query: 364 gcggc 368 ||||| Sbjct: 28108858 gcggc 28108862 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 28123084 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 28123143 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 28123144 gaacatcttcgtcttcctctccatcggcggc 28123174 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 28128639 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 28128580 Query: 338 gggcgtccccgtctccctctccatcggcggctacggc 374 | | |||||||| ||||||| |||||||| ||||| Sbjct: 28128579 gaacatccccgtcctcctctccgtcggcggcgacggc 28128543 Score = 73.8 bits (37), Expect = 4e-10 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand = Plus / Minus Query: 162 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 221 ||||||||||| || ||||||||||| || || || | |||||||| ||||| ||| Sbjct: 28096799 ttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactac 28096740 Query: 222 accatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctcgac 281 | ||| |||| ||| ||||||||| |||||| ||| | ||||||||| |||||| Sbjct: 28096739 aacatcgtcatcatctccttcctcagcgtcttcggc---catggcaagtactggctcgac 28096683 Query: 282 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 341 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 28096682 ctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggc 28096623 Query: 342 gtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 ||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 28096622 gtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 28096573 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 28091986 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 28091927 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 28091926 aagggcgtctacatgctcctctccatcggcggcgacggc 28091888 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 28105167 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28105226 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 28105227 caagggcatcgtcgtgctcctctccatcggcggc 28105260 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 28098595 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 28098654 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 || |||| || |||| |||||| ||||||||| Sbjct: 28098655 caggggcatcaccgtgctcctctcaatcggcggc 28098688 Score = 61.9 bits (31), Expect = 2e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||||||||||| |||||||| | ||||||| ||||||||||||||||||| Sbjct: 28104455 cctcgacctctccggncacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28104514 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 28104515 caagggcatcgtcgtgctcctctccatcggcggc 28104548 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28125873 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28125814 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 245 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28125813 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28125769 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 |||||||||||||||||||||||||||| Sbjct: 28125712 cgtcggcgccgacatcaagcactgccag 28125685 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgcca 331 ||||||||||||| ||||||||||||| Sbjct: 28130181 cgtcggcgccgacgtcaagcactgcca 28130155
>dbj|AK073800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D20, full insert sequence Length = 1106 Score = 137 bits (69), Expect = 3e-29 Identities = 175/210 (83%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 159 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 218 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 193 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 252 Query: 219 tacaccatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctc 278 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 253 tacacctccgtcatcatctccttcctcgccgtcttcggc---cacggccgctactccctc 309 Query: 279 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 338 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 310 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 369 Query: 339 ggcgtccccgtctccctctccatcggcggc 368 | ||||||| |||||||||||||||| Sbjct: 370 tacatccccgtgctcctctccatcggcggc 399
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 137 bits (69), Expect = 3e-29 Identities = 175/210 (83%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 159 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 218 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28086395 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28086454 Query: 219 tacaccatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctc 278 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 28086455 tacacctccgtcatcatctccttcctcgccgtcttcggc---cacggccgctactccctc 28086511 Query: 279 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 338 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 28086512 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 28086571 Query: 339 ggcgtccccgtctccctctccatcggcggc 368 | ||||||| |||||||||||||||| Sbjct: 28086572 tacatccccgtgctcctctccatcggcggc 28086601 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28102117 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28102176 Query: 364 gcggctacggcaccggctactcgctccc 391 ||||| | ||| ||| ||||||||||| Sbjct: 28102177 gcggccagggcggcgggtactcgctccc 28102204 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28093676 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28093735 Query: 364 gcggc 368 ||||| Sbjct: 28093736 gcggc 28093740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 28107962 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 28108021 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 28108022 gaacatcttcgtcttcctctccatcggcggc 28108052 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 28113517 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 28113458 Query: 338 gggcgtccccgtctccctctccatcggcggctacggc 374 | | |||||||| ||||||| |||||||| ||||| Sbjct: 28113457 gaacatccccgtcctcctctccgtcggcggcgacggc 28113421 Score = 73.8 bits (37), Expect = 4e-10 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand = Plus / Minus Query: 162 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 221 ||||||||||| || ||||||||||| || || || | |||||||| ||||| ||| Sbjct: 28081677 ttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactac 28081618 Query: 222 accatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctcgac 281 | ||| |||| ||| ||||||||| |||||| ||| | ||||||||| |||||| Sbjct: 28081617 aacatcgtcatcatctccttcctcagcgtcttcggc---catggcaagtactggctcgac 28081561 Query: 282 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 341 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 28081560 ctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggc 28081501 Query: 342 gtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 ||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 28081500 gtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 28081451 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 28076864 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 28076805 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 28076804 aagggcgtctacatgctcctctccatcggcggcgacggc 28076766 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 28090045 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28090104 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 28090105 caagggcatcgtcgtgctcctctccatcggcggc 28090138 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 28083473 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 28083532 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 || |||| || |||| |||||| ||||||||| Sbjct: 28083533 caggggcatcaccgtgctcctctcaatcggcggc 28083566 Score = 63.9 bits (32), Expect = 4e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||||||||||| |||||||| | ||||||| ||||||||||||||||||| Sbjct: 28089333 cctcgacctctccggscacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28089392 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 28089393 caagggcatcgtcgtgctcctctccatcggcggc 28089426 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28110751 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28110692 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 245 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28110691 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28110647 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 |||||||||||||||||||||||||||| Sbjct: 28110590 cgtcggcgccgacatcaagcactgccag 28110563 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgcca 331 ||||||||||||| ||||||||||||| Sbjct: 28115059 cgtcggcgccgacgtcaagcactgcca 28115033
>dbj|D55708.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1049 Score = 137 bits (69), Expect = 3e-29 Identities = 175/210 (83%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 159 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 218 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 135 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 194 Query: 219 tacaccatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctc 278 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 195 tacacctccgtcatcatctccttcctcgccgtcttcggc---cacggccgctactccctc 251 Query: 279 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 338 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 252 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 311 Query: 339 ggcgtccccgtctccctctccatcggcggc 368 | ||||||| |||||||||||||||| Sbjct: 312 tacatccccgtgctcctctccatcggcggc 341
>dbj|AB027426.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-g), partial cds, clone:C63579 Length = 383 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 245 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 304 Query: 364 gcggctacggcaccggctactcgctccc 391 ||||| | ||| ||| ||||||||||| Sbjct: 305 gcggccagggcggcgggtactcgctccc 332
>dbj|AK058882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B10, full insert sequence Length = 1019 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 290 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 349 Query: 364 gcggc 368 ||||| Sbjct: 350 gcggc 354
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 217 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 59972 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 60031 Query: 218 gtacaccatggtcaccatgtccttcctc 245 |||| || |||| ||| ||||||||| Sbjct: 60032 ctacaacaccgtcatcatctccttcctc 60059 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 283 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 342 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 15063 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 15004 Query: 343 tccccgtctccctctccatcggcggc 368 ||| |||| |||| ||||||||||| Sbjct: 15003 tcctcgtcctcctcgccatcggcggc 14978 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| | Sbjct: 71250 ctcgacatctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtcc 71309 Query: 336 aaggg 340 ||||| Sbjct: 71310 aaggg 71314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 182 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 241 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 15167 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 15108 Query: 242 cctc 245 |||| Sbjct: 15107 cctc 15104 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 165 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 224 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 93520 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 93579 Query: 225 atggtcaccatgtccttcctc 245 | |||| ||| ||||||||| Sbjct: 93580 accgtcatcatttccttcctc 93600 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggc 341 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 93662 ccgtcggccccgacatcaagtactgccaatccaagggc 93699 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 215 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 71134 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 71186
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 217 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 8848047 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 8848106 Query: 218 gtacaccatggtcaccatgtccttcctc 245 |||| || |||| ||| ||||||||| Sbjct: 8848107 ctacaacaccgtcatcatctccttcctc 8848134 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 283 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 342 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 8803138 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 8803079 Query: 343 tccccgtctccctctccatcggcggc 368 ||| |||| |||| ||||||||||| Sbjct: 8803078 tcctcgtcctcctcgccatcggcggc 8803053 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| | Sbjct: 8859325 ctcgacatctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtcc 8859384 Query: 336 aaggg 340 ||||| Sbjct: 8859385 aaggg 8859389 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 182 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 241 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 8803242 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 8803183 Query: 242 cctc 245 |||| Sbjct: 8803182 cctc 8803179 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 165 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 224 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 8881595 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 8881654 Query: 225 atggtcaccatgtccttcctc 245 | |||| ||| ||||||||| Sbjct: 8881655 accgtcatcatttccttcctc 8881675 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggc 341 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 8881737 ccgtcggccccgacatcaagtactgccaatccaagggc 8881774 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 215 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 8859209 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 8859261
>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full insert sequence Length = 1176 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 334 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 393 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 394 gaacatcttcgtcttcctctccatcggcggc 424
>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full insert sequence Length = 1234 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 335 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 394 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 395 gaacatcttcgtcttcctctccatcggcggc 425
>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1220 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 309 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 368 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 369 gaacatcttcgtcttcctctccatcggcggc 399
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C60571 Length = 1220 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 321 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 380 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 381 gaacatcttcgtcttcctctccatcggcggc 411
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C11701 Length = 1171 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 279 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 338 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 339 gaacatcttcgtcttcctctccatcggcggc 369
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C12269 Length = 1214 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 319 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 378 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 379 gaacatcttcgtcttcctctccatcggcggc 409
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C3540 Length = 1229 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 318 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 377 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 378 gaacatcttcgtcttcctctccatcggcggc 408
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds,clone:C10295 Length = 1199 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 300 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 359 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 360 gaacatcttcgtcttcctctccatcggcggc 390
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase homologue (OsChib3H-a)H-, complete cds, clone:C60129 Length = 1187 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 303 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 362 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | | || ||||| |||||||||||||||| Sbjct: 363 gaacatcttcgtcttcctctccatcggcggc 393
>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full insert sequence Length = 1317 Score = 73.8 bits (37), Expect = 4e-10 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 162 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 221 ||||||||||| || ||||||||||| || || || | |||||||| ||||| ||| Sbjct: 207 ttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactac 266 Query: 222 accatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctcgac 281 | ||| |||| ||| ||||||||| |||||| ||| | ||||||||| |||||| Sbjct: 267 aacatcgtcatcatctccttcctcagcgtcttcggc---catggcaagtactggctcgac 323 Query: 282 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 341 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 324 ctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggc 383 Query: 342 gtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 ||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 384 gtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 433
>dbj|AK102505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E15, full insert sequence Length = 1166 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 259 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 318 Query: 338 gggcgtccccgtctccctctccatcggcggctacggc 374 | | |||||||| ||||||| |||||||| ||||| Sbjct: 319 gaacatccccgtcctcctctccgtcggcggcgacggc 355
>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c), complete cds, clone:C12024 Length = 1148 Score = 73.8 bits (37), Expect = 4e-10 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 162 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 221 ||||||||||| || ||||||||||| || || || | |||||||| ||||| ||| Sbjct: 159 ttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactac 218 Query: 222 accatggtcaccatgtccttcctcgacgtctttggcgccnacggcaagtaccacctcgac 281 | ||| |||| ||| ||||||||| |||||| ||| | ||||||||| |||||| Sbjct: 219 aacatcgtcatcatctccttcctcagcgtcttcggc---catggcaagtactggctcgac 275 Query: 282 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 341 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 276 ctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggc 335 Query: 342 gtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 ||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 336 gtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 385
>ref|XM_476387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 169 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 228 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 229 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 284
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 56342 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 56283 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 56282 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 56227
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 8090 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 8031 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 391 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 8030 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 7975
>ref|XM_483351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 288 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 347 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 348 ggccgtctacgtcctcctctccatcggcggc 378
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 25755501 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 25755560 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 25755561 ggccgtctacgtcctcctctccatcggcggc 25755591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | |||||||||||| |||||||||||| | ||| Sbjct: 25771901 cgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaa 25771842 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | || |||||| |||||||||||||||| Sbjct: 25771841 acacatctccgtcttcctctccatcggcggc 25771811 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 263 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 322 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 25752413 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 25752354 Query: 323 gcactgccag 332 ||||||||| Sbjct: 25752353 ccactgccag 25752344 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Minus Query: 353 cctctccatcggcggctacggcaccggctactcgctccc 391 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 25752320 cctcgccatcggcggctacggcggcggatactcgctccc 25752282
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 27712 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 27771 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 27772 ggccgtctacgtcctcctctccatcggcggc 27802 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | |||||||||||| |||||||||||| | ||| Sbjct: 44112 cgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaa 44053 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 | || |||||| |||||||||||||||| Sbjct: 44052 acacatctccgtcttcctctccatcggcggc 44022 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 263 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 322 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 24624 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 24565 Query: 323 gcactgccag 332 ||||||||| Sbjct: 24564 ccactgccag 24555 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Minus Query: 353 cctctccatcggcggctacggcaccggctactcgctccc 391 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 24531 cctcgccatcggcggctacggcggcggatactcgctccc 24493
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 133249 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 133308 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 133309 ggccgtctacgtcctcctctccatcggcggc 133339 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 263 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 322 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 130161 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 130102 Query: 323 gcactgccag 332 ||||||||| Sbjct: 130101 ccactgccag 130092 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Minus Query: 353 cctctccatcggcggctacggcaccggctactcgctccc 391 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 130068 cctcgccatcggcggctacggcggcggatactcgctccc 130030
>dbj|AK122053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G24, full insert sequence Length = 2161 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 1139 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 1198 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 1199 aagggcgtctacatgctcctctccatcggcggcgacggc 1237
>dbj|AK073757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O15, full insert sequence Length = 1281 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 259 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 318 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 319 aagggcgtctacatgctcctctccatcggcggcgacggc 357
>dbj|AK073267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L23, full insert sequence Length = 1368 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 288 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 347 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 348 ggccgtctacgtcctcctctccatcggcggc 378
>dbj|D55714.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1167 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 239 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 298 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 299 aagggcgtctacatgctcctctccatcggcggcgacggc 337
>dbj|D55709.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1191 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 267 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 326 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 327 ggccgtctacgtcctcctctccatcggcggc 357
>dbj|AB027425.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-d), complete cds, clone:C12856 Length = 1284 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 278 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 337 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 288 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 347 Query: 338 gggcgtccccgtctccctctccatcggcggc 368 || |||| |||| |||||||||||||||| Sbjct: 348 ggccgtctacgtcctcctctccatcggcggc 378
>dbj|AB027423.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), partial cds, clone:C62532 Length = 989 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 221 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 280 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 281 aagggcgtctacatgctcctctccatcggcggcgacggc 319
>dbj|AB027422.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C62515 Length = 996 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 225 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 284 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 285 aagggcgtctacatgctcctctccatcggcggcgacggc 323
>dbj|AB027421.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C60416 Length = 1416 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 235 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 294 Query: 336 aagggcgtccccgtctccctctccatcggcggctacggc 374 ||||||||| | | |||||||||||||||| ||||| Sbjct: 295 aagggcgtctacatgctcctctccatcggcggcgacggc 333
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 283 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 342 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 135580 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 135521 Query: 343 tccccgtctccctctccatcggcggc 368 ||| |||| |||| ||||||||||| Sbjct: 135520 tcctcgtcctcctcgccatcggcggc 135495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 182 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 241 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 135684 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 135625 Query: 242 cctc 245 |||| Sbjct: 135624 cctc 135621
>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full insert sequence Length = 1076 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 289 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 348 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 349 caagggcatcgtcgtgctcctctccatcggcggc 382
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full insert sequence Length = 1008 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 197 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 256 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 || |||| || |||| |||||| ||||||||| Sbjct: 257 caggggcatcaccgtgctcctctcaatcggcggc 290
>dbj|AK065866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045O11, full insert sequence Length = 1198 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 283 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 342 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 288 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 347 Query: 343 tccccgtctccctctccatcggcggc 368 ||| |||| |||| ||||||||||| Sbjct: 348 tcctcgtcctcctcgccatcggcggc 373 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 182 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 241 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 184 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 243 Query: 242 cctc 245 |||| Sbjct: 244 cctc 247
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full insert sequence Length = 1150 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 244 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 303 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 || |||| || |||| |||||| ||||||||| Sbjct: 304 caggggcatcaccgtgctcctctcaatcggcggc 337
>dbj|AK062114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C02, full insert sequence Length = 1199 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 283 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 342 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 287 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 346 Query: 343 tccccgtctccctctccatcggcggc 368 ||| |||| |||| ||||||||||| Sbjct: 347 tcctcgtcctcctcgccatcggcggc 372 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 182 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 241 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 183 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 242 Query: 242 cctc 245 |||| Sbjct: 243 cctc 246
>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1145 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 267 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 326 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 ||||||| || ||| |||||||||||||||| Sbjct: 327 caagggcatcgtcgtgctcctctccatcggcggc 360
>dbj|AB027427.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-h), partial cds, clone:S2321 Length = 500 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 275 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 334 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 271 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 330 Query: 335 caagggcgtccccgtctccctctccatcggcggc 368 || |||| || |||| |||||| ||||||||| Sbjct: 331 caggggcatcaccgtgctcctctcaatcggcggc 364
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| || || |||||||||||||||||||||||||||||| | Sbjct: 76028 ctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtcc 76087 Query: 336 aagggcgtccccgtctccctctccatcggcggc 368 | |||| || |||| ||| |||||||||||| Sbjct: 76088 aggggcatcaccgtgctcctgtccatcggcggc 76120
>ref|XM_483350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 894 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 263 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 322 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 225 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 284 Query: 323 gcactgccag 332 ||||||||| Sbjct: 285 ccactgccag 294 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Plus Query: 353 cctctccatcggcggctacggcaccggctactcgctccc 391 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 318 cctcgccatcggcggctacggcggcggatactcgctccc 356
>dbj|AK106678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A12, full insert sequence Length = 938 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 762 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 703 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 245 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 702 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 658 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 |||||||||||||||||||||||||||| Sbjct: 601 cgtcggcgccgacatcaagcactgccag 574
>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full insert sequence Length = 1152 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 335 |||||| ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| | Sbjct: 276 ctcgacatctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtcc 335 Query: 336 aaggg 340 ||||| Sbjct: 336 aaggg 340 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 215 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 160 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 212
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full insert sequence Length = 1161 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 141 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 200 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 175 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 234 Query: 201 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 245 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 235 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 279 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 305 cgtcggcgccgacatcaagcactgccag 332 |||||||||||||||||||||||||||| Sbjct: 336 cgtcggcgccgacatcaagcactgccag 363
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840850 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840791 Query: 364 gcggctacggcaccggctactcgctcc 390 || || | ||| ||||||||| |||| Sbjct: 10840790 gcagccagggcggcggctactccctcc 10840764 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tcctacccctcctctccgtcgtcg 99 |||| ||||||||||||||||||| Sbjct: 3257666 tcctccccctcctctccgtcgtcg 3257643
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840549 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840490 Query: 364 gcggctacggcaccggctactcgctcc 390 || || | ||| ||||||||| |||| Sbjct: 10840489 gcagccagggcggcggctactccctcc 10840463 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tcctacccctcctctccgtcgtcg 99 |||| ||||||||||||||||||| Sbjct: 3257611 tcctccccctcctctccgtcgtcg 3257588
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 304 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 363 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 107199 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 107140 Query: 364 gcggctacggcaccggctactcgctcc 390 || || | ||| ||||||||| |||| Sbjct: 107139 gcagccagggcggcggctactccctcc 107113
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 318 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcacc 377 |||||||||||||||| || |||| || |||| |||||||||||||||| | ||| | Sbjct: 7513706 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcggccagggcggc 7513765 Query: 378 ggctactcgctccc 391 |||||||| ||||| Sbjct: 7513766 ggctactccctccc 7513779
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 318 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcacc 377 |||||||||||||||| || |||| || |||| |||||||||||||||| | ||| | Sbjct: 107412 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcggccagggcggc 107471 Query: 378 ggctactcgctccc 391 |||||||| ||||| Sbjct: 107472 ggctactccctccc 107485
>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase inhibitor protein Length = 2143 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 305 cgtcggcgccgacatcaagcactgccagt 333 |||||| |||||||||||||||||||||| Sbjct: 1266 cgtcggtgccgacatcaagcactgccagt 1294
>ref|NM_186678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 897 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 ||||||||||||||||||||||| |||| Sbjct: 778 cgtcggcgccgacatcaagcactaccag 751
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 cgtcggcgccgacatcaagcactgccag 332 ||||||||||||||||||||||| |||| Sbjct: 165275 cgtcggcgccgacatcaagcactaccag 165248
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full insert sequence Length = 1162 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 cgtcggcgccgacatcaagcactgcca 331 ||||||||||||| ||||||||||||| Sbjct: 312 cgtcggcgccgacgtcaagcactgcca 338
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full insert sequence Length = 1193 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 cgtcggcgccgacatcaagcactgcca 331 ||||||||||||| ||||||||||||| Sbjct: 316 cgtcggcgccgacgtcaagcactgcca 342
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full insert sequence Length = 1153 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 cgtcggcgccgacatcaagcactgcca 331 ||||||||||||| ||||||||||||| Sbjct: 303 cgtcggcgccgacgtcaagcactgcca 329
>dbj|AK067962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123G23, full insert sequence Length = 1308 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 276 ctcgacctctccggccacgacct 298 ||||||||||||||||||||||| Sbjct: 259 ctcgacctctccggccacgacct 281
>ref|XM_477712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 319 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggc 368 ||||| |||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 167 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcggc 216
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0684A03 Length = 64705 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 319 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggc 368 ||||| |||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 42745 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcggc 42794
>gb|AC139154.3| Mus musculus chromosome 7 clone RP24-356B8, complete sequence Length = 164774 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 atcaagcactgccagttcaag 338 ||||||||||||||||||||| Sbjct: 129440 atcaagcactgccagttcaag 129420
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 ccgtcggcgccgacatcaagc 324 ||||||||||||||||||||| Sbjct: 2649855 ccgtcggcgccgacatcaagc 2649875
>emb|Z68893.1|HLHOLLIGN H.lanatus mRNA for Hol l I protein Length = 1086 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 taccacctcgacctctccggccacg 294 |||||| |||||||||||||||||| Sbjct: 333 taccacttcgacctctccggccacg 357
>gb|AE011877.1| Xanthomonas axonopodis pv. citri str. 306, section 255 of 469 of the complete genome Length = 12615 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 catcggcggctacggcaccggctac 383 |||||||||| |||||||||||||| Sbjct: 6508 catcggcggcgacggcaccggctac 6484
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 ctctccatcggcggctacggc 374 ||||||||||||||||||||| Sbjct: 1796308 ctctccatcggcggctacggc 1796328
>emb|X78813.1|PPPHLPI P.pratense mRNA for Phl pI allergen Length = 1066 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 taccacctcgacctctccggccacg 294 |||||| |||||||||||||||||| Sbjct: 376 taccacttcgacctctccggccacg 400
>gb|AY241677.1| Dactylis glomerata group 1 allergen Dac g 1.02 precursor, mRNA, complete cds Length = 795 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 taccacctcgacctctccggccacg 294 |||||| |||||||||||||||||| Sbjct: 379 taccacttcgacctctccggccacg 403
>gb|AY241676.1| Dactylis glomerata group 1 allergen Dac g 1.01 precursor, mRNA, partial cds Length = 723 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 taccacctcgacctctccggccacg 294 |||||| |||||||||||||||||| Sbjct: 307 taccacttcgacctctccggccacg 331
>gb|AC149062.3| Mus musculus BAC clone RP23-183E20 from 7, complete sequence Length = 229956 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 atcaagcactgccagttcaag 338 ||||||||||||||||||||| Sbjct: 134029 atcaagcactgccagttcaag 134049
>gb|AY543539.1| Triticum aestivum expansin EXPB4 mRNA, complete cds Length = 825 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 taccacctcgacctctccggccacg 294 |||||| |||||||||||||||||| Sbjct: 389 taccacttcgacctctccggccacg 413
>ref|XM_478063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 cgtgcctcctacccctcctctccg 93 |||||||||||| ||||||||||| Sbjct: 322 cgtgcctcctactcctcctctccg 299
>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence Length = 203937 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aacaagagaccaaagctact 20 |||||||||||||||||||| Sbjct: 73383 aacaagagaccaaagctact 73402
>emb|CR450738.8| Zebrafish DNA sequence from clone DKEY-71L10 in linkage group 8, complete sequence Length = 101924 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ctccatcggcggctacggcaccggctac 383 ||||||| |||||||||||| ||||||| Sbjct: 23584 ctccatcagcggctacggcagcggctac 23611
>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8, complete sequence Length = 227074 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 356 ctccatcggcggctacggcaccggctac 383 ||||||| |||||||||||| ||||||| Sbjct: 59150 ctccatcagcggctacggcagcggctac 59123
>ref|NM_205481.1| Gallus gallus lysyl oxidase (LOX), mRNA Length = 1263 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cggctacggcaccggctact 384 |||||||||||||||||||| Sbjct: 612 cggctacggcaccggctact 631
>emb|BX470186.11| Zebrafish DNA sequence from clone DKEY-52I22 in linkage group 18, complete sequence Length = 131089 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agtaccacctcgacctctcc 287 |||||||||||||||||||| Sbjct: 100001 agtaccacctcgacctctcc 99982
>emb|BX248392.16| Zebrafish DNA sequence from clone CH211-220F12 in linkage group 18, complete sequence Length = 183594 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 agtaccacctcgacctctcc 287 |||||||||||||||||||| Sbjct: 53054 agtaccacctcgacctctcc 53073
>ref|XM_703987.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 2 (LOC566182), mRNA Length = 2401 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ctccatcggcggctacggcaccggctac 383 ||||||| |||||||||||| ||||||| Sbjct: 2160 ctccatcagcggctacggcagcggctac 2187
>ref|XM_683218.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 1 (LOC566182), mRNA Length = 2392 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ctccatcggcggctacggcaccggctac 383 ||||||| |||||||||||| ||||||| Sbjct: 2151 ctccatcagcggctacggcagcggctac 2178
>ref|XM_682127.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 1 (LOC564451), mRNA Length = 2371 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ctccatcggcggctacggcaccggctac 383 ||||||| |||||||||||| ||||||| Sbjct: 2130 ctccatcagcggctacggcagcggctac 2157
>ref|XM_703603.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 2 (LOC564451), mRNA Length = 2260 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 ctccatcggcggctacggcaccggctac 383 ||||||| |||||||||||| ||||||| Sbjct: 2019 ctccatcagcggctacggcagcggctac 2046
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cccctcctctccgtcgtcgctgcc 104 ||||||||||||||||||| |||| Sbjct: 171493 cccctcctctccgtcgtcgttgcc 171470
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 cgtgcctcctacccctcctctccg 93 |||||||||||| ||||||||||| Sbjct: 73267 cgtgcctcctactcctcctctccg 73244
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcgacctctccggccacgac 296 |||||||||||||||||||| Sbjct: 77566 tcgacctctccggccacgac 77585
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tcctacccctcctctccgtcgtcg 99 |||| ||||||||||||||||||| Sbjct: 48052 tcctccccctcctctccgtcgtcg 48029
>gb|M97881.1|CHKLOX Gallus gallus domesticus aortic lysyl oxidase mRNA, complete cds Length = 1263 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cggctacggcaccggctact 384 |||||||||||||||||||| Sbjct: 612 cggctacggcaccggctact 631 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,496,046 Number of Sequences: 3902068 Number of extensions: 2496046 Number of successful extensions: 50799 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49887 Number of HSP's gapped (non-prelim): 863 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
