ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence 101 7e-19
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 101 7e-19
3gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare str... 101 7e-19
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-19
5gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome... 101 7e-19
6dbj|AK111568.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 7e-19
7dbj|AK098994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 7e-19
8gb|AY108955.1| Zea mays PCO083425 mRNA sequence 62 6e-07
9dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 42 0.58
10dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 0.58
11gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 40 2.3
12gb|AC087327.7| Trypanosoma brucei chromosome 4 clone RPCI93-3I12... 40 2.3
13ref|XM_587477.2| PREDICTED: Bos taurus similar to SET binding fa... 40 2.3
14gb|AC087214.4| Papio anubis clone RP41-150K7, complete sequence 40 2.3
15ref|XM_821307.1| Trypanosoma brucei TREU927 clone RPCI93-3I12 hy... 40 2.3
16gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 2.3
17ref|NM_169253.1| Drosophila melanogaster CG11984-RC, transcript ... 40 2.3
18ref|NM_169252.1| Drosophila melanogaster CG11984-RA, transcript ... 40 2.3
19ref|NM_141604.2| Drosophila melanogaster CG11984-RB, transcript ... 40 2.3
20gb|AY061066.1| Drosophila melanogaster LD03515 full length cDNA 40 2.3
21gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 2.3
22gb|AC009258.3|AC009258 Drosophila melanogaster, chromosome 3R, r... 40 2.3
23gb|AC008254.7|AC008254 Drosophila melanogaster, chromosome 3R, r... 40 2.3
24gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosom... 40 2.3
25gb|AC130184.4| Macaca mulatta clone CH250-513J21, complete sequence 40 2.3
26gb|BT024222.1| Drosophila melanogaster LP17815 full insert cDNA 40 2.3
27gb|M86372.1|RATTREL08 Rattus norvegicus tropoelastin (tropoelast... 40 2.3
28gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19... 40 2.3
29dbj|AP001731.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 2.3
30gb|BT001502.1| Drosophila melanogaster LD34776 full insert cDNA 40 2.3
31gb|BT001483.1| Drosophila melanogaster LD22379 full insert cDNA 40 2.3
32gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 2.3
33dbj|AP000163.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 2.3
34dbj|AP000021.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 2.3
35dbj|AP001422.1| Homo sapiens genomic DNA, chromosome 21q22.2, cl... 40 2.3
36gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete... 38 9.0
37gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 38 9.0
38ref|XM_960523.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.0
39ref|XM_955712.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.0
40ref|XM_330121.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.0
41ref|XM_331329.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.0
42ref|XM_753714.1| Ustilago maydis 521 hypothetical protein (UM026... 38 9.0
43ref|XM_385244.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 38 9.0
44emb|BX063853.1|CNS09LFL Single read from an extremity of a full-... 38 9.0
45emb|BX060118.1|CNS09IJU Single read from an extremity of a full-... 38 9.0
46emb|BX054899.1|CNS09EIV Single read from an extremity of a full-... 38 9.0
47emb|BX046530.1|CNS0982E Single read from an extremity of a full-... 38 9.0
48emb|BX043323.1|CNS095LB Single read from an extremity of a full-... 38 9.0
49emb|BX030841.1|CNS08VYL Single read from an extremity of a full-... 38 9.0
50emb|BX030840.1|CNS08VYK Single read from an extremity of a full-... 38 9.0
51emb|BX024837.1|CNS08RBT Single read from an extremity of a full-... 38 9.0
52emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cos... 38 9.0
53emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella ty... 38 9.0
54ref|NM_165673.1| Drosophila melanogaster CG1968-RA, transcript v... 38 9.0
55ref|NM_136632.2| Drosophila melanogaster CG1968-RB, transcript v... 38 9.0
56gb|AY061082.1| Drosophila melanogaster LD06894 full length cDNA 38 9.0
57ref|NM_001037154.1| Rattus norvegicus protocadherin gamma A3 (Pc... 38 9.0
58gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome... 38 9.0
59gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 9.0
60dbj|AK089399.1| Mus musculus B6-derived CD11 +ve dendritic cells... 38 9.0
61dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
62gb|AY574014.1| Rattus norvegicus protocadherin gamma a3 (Pcdhga3... 38 9.0
63gb|AY787771.1| Propionibacterium acnes isolate SG2 cAMP factor 3... 38 9.0
64gb|AY787766.1| Propionibacterium acnes strain NCTC 10390 cAMP fa... 38 9.0
65gb|AY726657.1| Propionibacterium acnes Camp3 gene, complete cds 38 9.0
66ref|XM_574131.1| PREDICTED: Rattus norvegicus similar to protoca... 38 9.0
67dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
68dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
69ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 ... 38 9.0
70gb|AY648560.1| Klebsiella pneumoniae strain M5a1 Orf1 gene, part... 38 9.0
71gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 38 9.0
72gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 38 9.0
73gb|AC140282.3| Mus musculus BAC clone RP24-501L1 from 1, complet... 38 9.0
74gb|U39514.1|ESU39514 Echinometra sp. clone A-G2 bindin gene, par... 38 9.0
75gb|U39513.1|ESU39513 Echinometra sp. clone A-G1 bindin gene, par... 38 9.0
76emb|AL627122.18| Mouse DNA sequence from clone RP23-132E8 on chr... 38 9.0 
>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence
          Length = 23480

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                         
Query: 3     gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
             |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 16839 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 16780

                                                                         
Query: 63    aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
             || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 16779 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 16720

                        
Query: 123   tccgtcaagca 133
             ||||| |||||
Sbjct: 16719 tccgtgaagca 16709
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                           
Query: 3       gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
               |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 7472758 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 7472699

                                                                           
Query: 63      aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
               || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 7472698 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 7472639

                          
Query: 123     tccgtcaagca 133
               ||||| |||||
Sbjct: 7472638 tccgtgaagca 7472628
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>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0071C04, from chromosome 3, complete sequence
          Length = 126078

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                          
Query: 3      gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
              |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 111313 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 111254

                                                                          
Query: 63     aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
              || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 111253 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 111194

                         
Query: 123    tccgtcaagca 133
              ||||| |||||
Sbjct: 111193 tccgtgaagca 111183
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                           
Query: 3       gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
               |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 7470593 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 7470534

                                                                           
Query: 63      aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
               || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 7470533 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 7470474

                          
Query: 123     tccgtcaagca 133
               ||||| |||||
Sbjct: 7470473 tccgtgaagca 7470463
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>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0042A11, complete sequence
          Length = 113049

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                        
Query: 3    gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
            |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 1654 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 1595

                                                                        
Query: 63   aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
            || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 1594 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 1535

                       
Query: 123  tccgtcaagca 133
            ||||| |||||
Sbjct: 1534 tccgtgaagca 1524
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>dbj|AK111568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L11, full
           insert sequence
          Length = 1785

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
           |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 609 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 668

                                                                       
Query: 63  aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
           || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 669 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 728

                      
Query: 123 tccgtcaagca 133
           ||||| |||||
Sbjct: 729 tccgtgaagca 739
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>dbj|AK098994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096B20, full
           insert sequence
          Length = 1758

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaggcggagacggacgcggaccgggagacggcgctgagctacggcctcacggtcgccggg 62
           |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| | 
Sbjct: 609 gaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagc 668

                                                                       
Query: 63  aaagggcaggagcaggtgccggaggagctggacagggtcctgaaggagtacacaaccttc 122
           || |||||||||  |||   ||   ||||||||| ||| ||| |||||||||| ||||||
Sbjct: 669 aaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttc 728

                      
Query: 123 tccgtcaagca 133
           ||||| |||||
Sbjct: 729 tccgtgaagca 739
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>gb|AY108955.1| Zea mays PCO083425 mRNA sequence
          Length = 1107

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 86  ggagctggacagggtcctgaaggagtacacaaccttctccgtcaagcaggt 136
           ||||||||||||||||||  |||||||||| |||||||| || ||||||||
Sbjct: 10  ggagctggacagggtcctcgaggagtacaccaccttctcggtgaagcaggt 60
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 66      gggcaggagcaggtgccggag 86
               |||||||||||||||||||||
Sbjct: 1276663 gggcaggagcaggtgccggag 1276683
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 3       gaggcggagacggacgcggac 23
               |||||||||||||||||||||
Sbjct: 7273193 gaggcggagacggacgcggac 7273213



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 130     agcaggtcgacgaaggggcgggcg 153
               ||||||||| ||||||||||||||
Sbjct: 4421361 agcaggtcggcgaaggggcgggcg 4421384
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 46      gcctcacggtcgccgggaaa 65
               ||||||||||||||||||||
Sbjct: 1307756 gcctcacggtcgccgggaaa 1307775
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>gb|AC087327.7| Trypanosoma brucei chromosome 4 clone RPCI93-3I12, complete sequence
          Length = 158030

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gcctcacggtcgccgggaaa 65
             ||||||||||||||||||||
Sbjct: 16259 gcctcacggtcgccgggaaa 16240
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>ref|XM_587477.2| PREDICTED: Bos taurus similar to SET binding factor 1 isoform a
            (LOC510349), mRNA
          Length = 5442

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   ctggacagggtcctgaagga 109
            ||||||||||||||||||||
Sbjct: 3152 ctggacagggtcctgaagga 3133
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>gb|AC087214.4| Papio anubis clone RP41-150K7, complete sequence
          Length = 141415

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caggtgccggaggagctgga 94
             ||||||||||||||||||||
Sbjct: 58786 caggtgccggaggagctgga 58767
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>ref|XM_821307.1| Trypanosoma brucei TREU927 clone RPCI93-3I12 hypothetical protein
            (Tb927.4.4760) partial mRNA
          Length = 2862

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   gcctcacggtcgccgggaaa 65
            ||||||||||||||||||||
Sbjct: 1994 gcctcacggtcgccgggaaa 1975
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>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete
             sequence
          Length = 119664

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caggtgccggaggagctgga 94
             ||||||||||||||||||||
Sbjct: 50830 caggtgccggaggagctgga 50811
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>ref|NM_169253.1| Drosophila melanogaster CG11984-RC, transcript variant C (CG11984),
            mRNA
          Length = 2561

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1460 gccggaggagctggacaggg 1479
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>ref|NM_169252.1| Drosophila melanogaster CG11984-RA, transcript variant A (CG11984),
            mRNA
          Length = 2559

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1458 gccggaggagctggacaggg 1477
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>ref|NM_141604.2| Drosophila melanogaster CG11984-RB, transcript variant B (CG11984),
            mRNA
          Length = 2662

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1561 gccggaggagctggacaggg 1580
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>gb|AY061066.1| Drosophila melanogaster LD03515 full length cDNA
          Length = 2563

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1444 gccggaggagctggacaggg 1463
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     caggtgccggaggagctgga 94
              ||||||||||||||||||||
Sbjct: 612689 caggtgccggaggagctgga 612670
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>gb|AC009258.3|AC009258 Drosophila melanogaster, chromosome 3R, region 85C-85C, BAC clone
             BACR09F04, complete sequence
          Length = 176036

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gccggaggagctggacaggg 99
             ||||||||||||||||||||
Sbjct: 74008 gccggaggagctggacaggg 73989
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>gb|AC008254.7|AC008254 Drosophila melanogaster, chromosome 3R, region 85C-85C, BAC clone
              BACR02G22, complete sequence
          Length = 164982

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     gccggaggagctggacaggg 99
              ||||||||||||||||||||
Sbjct: 152846 gccggaggagctggacaggg 152827
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>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete
             sequence
          Length = 203726

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    gggcaggagcaggtgccggaggag 89
             ||||||||||||||| ||||||||
Sbjct: 14479 gggcaggagcaggtgtcggaggag 14502
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>gb|AC130184.4| Macaca mulatta clone CH250-513J21, complete sequence
          Length = 160850

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caggtgccggaggagctgga 94
             ||||||||||||||||||||
Sbjct: 12344 caggtgccggaggagctgga 12325
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>gb|BT024222.1| Drosophila melanogaster LP17815 full insert cDNA
          Length = 2398

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1278 gccggaggagctggacaggg 1297
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>gb|M86372.1|RATTREL08 Rattus norvegicus tropoelastin (tropoelastin) gene, exons 21, 22,
           and partial cds
          Length = 1105

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  caggtgccggaggagctgga 94
           ||||||||||||||||||||
Sbjct: 572 caggtgccggaggagctgga 591
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>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the
             complete sequence
          Length = 306650

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gccggaggagctggacaggg 99
             ||||||||||||||||||||
Sbjct: 80237 gccggaggagctggacaggg 80218
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>dbj|AP001731.1| Homo sapiens genomic DNA, chromosome 21q, section 75/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     caggagcaggtgccggaggagctg 92
              |||||||||| |||||||||||||
Sbjct: 242725 caggagcaggagccggaggagctg 242702
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>gb|BT001502.1| Drosophila melanogaster LD34776 full insert cDNA
          Length = 2402

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1328 gccggaggagctggacaggg 1347
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>gb|BT001483.1| Drosophila melanogaster LD22379 full insert cDNA
          Length = 2451

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccggaggagctggacaggg 99
            ||||||||||||||||||||
Sbjct: 1328 gccggaggagctggacaggg 1347
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      cggaccgggagacggcgctg 38
               ||||||||||||||||||||
Sbjct: 2827218 cggaccgggagacggcgctg 2827237
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>dbj|AP000163.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 15/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    caggagcaggtgccggaggagctg 92
             |||||||||| |||||||||||||
Sbjct: 29142 caggagcaggagccggaggagctg 29119
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>dbj|AP000021.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 12/13
          Length = 100000

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    caggagcaggtgccggaggagctg 92
             |||||||||| |||||||||||||
Sbjct: 63538 caggagcaggagccggaggagctg 63515
to top
>dbj|AP001422.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:S166, LB7T-ERG
             region, complete sequence
          Length = 83533

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    caggagcaggtgccggaggagctg 92
             |||||||||| |||||||||||||
Sbjct: 80558 caggagcaggagccggaggagctg 80535
to top
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence
          Length = 171235

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 81    ccggaggagctggacagggtcctgaag 107
             |||||||||||||||||| ||| ||||
Sbjct: 34494 ccggaggagctggacaggatccagaag 34520
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 124     ccgtcaagcaggtcgacga 142
               |||||||||||||||||||
Sbjct: 2283423 ccgtcaagcaggtcgacga 2283441
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>ref|XM_960523.1| Neurospora crassa OR74A hypothetical protein (NCU02934.1) partial
            mRNA
          Length = 2826

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                               
Query: 5    ggcggagacggacgcggaccgggagacggcgctga 39
            ||||||| ||| | ||||||||||||||| |||||
Sbjct: 2686 ggcggagccggccacggaccgggagacggagctga 2720
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>ref|XM_955712.1| Neurospora crassa OR74A hypothetical protein (NCU08938.1) partial
          mRNA
          Length = 1227

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 71 ggagcaggtgccggaggag 89
          |||||||||||||||||||
Sbjct: 95 ggagcaggtgccggaggag 77
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>ref|XM_330121.1| Neurospora crassa OR74A hypothetical protein (NCU02934.1) partial
            mRNA
          Length = 2826

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                               
Query: 5    ggcggagacggacgcggaccgggagacggcgctga 39
            ||||||| ||| | ||||||||||||||| |||||
Sbjct: 2686 ggcggagccggccacggaccgggagacggagctga 2720
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>ref|XM_331329.1| Neurospora crassa OR74A hypothetical protein (NCU08938.1) partial
          mRNA
          Length = 1227

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 71 ggagcaggtgccggaggag 89
          |||||||||||||||||||
Sbjct: 95 ggagcaggtgccggaggag 77
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>ref|XM_753714.1| Ustilago maydis 521 hypothetical protein (UM02660.1) partial mRNA
          Length = 2667

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 79   tgccggaggagctggacagggtc 101
            ||||||||||||||||| |||||
Sbjct: 1474 tgccggaggagctggacggggtc 1452
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>ref|XM_385244.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05068.1)
            partial mRNA
          Length = 2091

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 90   ctggacagggtcctgaagg 108
            |||||||||||||||||||
Sbjct: 1656 ctggacagggtcctgaagg 1638
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>emb|BX063853.1|CNS09LFL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC45DF07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1001

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 142 ggagacggacgcggaccgg 160
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>emb|BX060118.1|CNS09IJU Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC40BE03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1047

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 885 ggagacggacgcggaccgg 903
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>emb|BX054899.1|CNS09EIV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC33BB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 941

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 461 ggagacggacgcggaccgg 479
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>emb|BX046530.1|CNS0982E Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC20AH06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 947

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 807 ggagacggacgcggaccgg 789
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>emb|BX043323.1|CNS095LB Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC15DE01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1007

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 957 ggagacggacgcggaccgg 975
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>emb|BX030841.1|CNS08VYL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA46AC02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 976

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 804 ggagacggacgcggaccgg 786
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>emb|BX030840.1|CNS08VYK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA46AC02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1001

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 694 ggagacggacgcggaccgg 712
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>emb|BX024837.1|CNS08RBT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA38AC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 862

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 8   ggagacggacgcggaccgg 26
           |||||||||||||||||||
Sbjct: 812 ggagacggacgcggaccgg 794
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>emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cosmid contig 20H10
          Length = 96283

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    ggagcaggtgccggaggag 89
             |||||||||||||||||||
Sbjct: 48584 ggagcaggtgccggaggag 48602
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>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 12/20
          Length = 274050

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    gccggaggagctggacagg 98
             |||||||||||||||||||
Sbjct: 17346 gccggaggagctggacagg 17328
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>ref|NM_165673.1| Drosophila melanogaster CG1968-RA, transcript variant A (CG1968),
           mRNA
          Length = 2018

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 81  ccggaggagctggacagggtcctgaag 107
           |||||||||||||||||| ||| ||||
Sbjct: 34  ccggaggagctggacaggatccagaag 60
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>ref|NM_136632.2| Drosophila melanogaster CG1968-RB, transcript variant B (CG1968),
           mRNA
          Length = 2086

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 81  ccggaggagctggacagggtcctgaag 107
           |||||||||||||||||| ||| ||||
Sbjct: 34  ccggaggagctggacaggatccagaag 60
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>gb|AY061082.1| Drosophila melanogaster LD06894 full length cDNA
          Length = 2091

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 81  ccggaggagctggacagggtcctgaag 107
           |||||||||||||||||| ||| ||||
Sbjct: 28  ccggaggagctggacaggatccagaag 54
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>ref|NM_001037154.1| Rattus norvegicus protocadherin gamma A3 (Pcdhga3), mRNA
          Length = 4712

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 78  gtgccggaggagctggaca 96
           |||||||||||||||||||
Sbjct: 264 gtgccggaggagctggaca 282
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>gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome 7, complete sequence
          Length = 213292

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 60     gggaaagggcaggagcaggtgcc 82
              ||||||||| |||||||||||||
Sbjct: 183797 gggaaaggggaggagcaggtgcc 183775
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 32      ggcgctgagctacggcctc 50
               |||||||||||||||||||
Sbjct: 4128559 ggcgctgagctacggcctc 4128541
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>dbj|AK089399.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730022L22
            product:unclassifiable, full insert sequence
          Length = 2334

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   aaagggcaggagcaggtgc 81
            |||||||||||||||||||
Sbjct: 1771 aaagggcaggagcaggtgc 1789
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 5        ggcggagacggacgcggac 23
                |||||||||||||||||||
Sbjct: 26188407 ggcggagacggacgcggac 26188389



 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 19       cggaccgggagacggcgct 37
                |||||||||||||||||||
Sbjct: 22014632 cggaccgggagacggcgct 22014650
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>gb|AY574014.1| Rattus norvegicus protocadherin gamma a3 (Pcdhga3) mRNA, complete
           cds
          Length = 4712

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 78  gtgccggaggagctggaca 96
           |||||||||||||||||||
Sbjct: 264 gtgccggaggagctggaca 282
to top
>gb|AY787771.1| Propionibacterium acnes isolate SG2 cAMP factor 3 gene, complete
           cds
          Length = 816

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 ccgtcaagcaggtcgacga 142
           |||||||||||||||||||
Sbjct: 719 ccgtcaagcaggtcgacga 737
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>gb|AY787766.1| Propionibacterium acnes strain NCTC 10390 cAMP factor 3 gene,
           complete cds
          Length = 816

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 ccgtcaagcaggtcgacga 142
           |||||||||||||||||||
Sbjct: 719 ccgtcaagcaggtcgacga 737
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>gb|AY726657.1| Propionibacterium acnes Camp3 gene, complete cds
          Length = 816

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 ccgtcaagcaggtcgacga 142
           |||||||||||||||||||
Sbjct: 719 ccgtcaagcaggtcgacga 737
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>ref|XM_574131.1| PREDICTED: Rattus norvegicus similar to protocadherin gamma A3
           (LOC498847), mRNA
          Length = 2477

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 78  gtgccggaggagctggaca 96
           |||||||||||||||||||
Sbjct: 94  gtgccggaggagctggaca 112
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>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0612G07
          Length = 182548

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    cggaccgggagacggcgct 37
             |||||||||||||||||||
Sbjct: 52505 cggaccgggagacggcgct 52523
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>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0453H04
          Length = 175047

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     ggcggagacggacgcggac 23
             |||||||||||||||||||
Sbjct: 52947 ggcggagacggacgcggac 52929
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>ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 (ENSANGG00000016594),
            mRNA
          Length = 1481

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 8    ggagacggacgcggaccgg 26
            |||||||||||||||||||
Sbjct: 998  ggagacggacgcggaccgg 1016
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>gb|AY648560.1| Klebsiella pneumoniae strain M5a1 Orf1 gene, partial cds; LysR-like
            regulatory protein (mhbR), putative 3-hydroxybenzoate
            transporter (mhbT), gentisate 1,2-dioxygenase (mhbD),
            fumarylpyruvate hydrolase (mhbH), maleylpyruvate
            isomerase (mhbI), 3-hydroxybenzoate-6-hydroxylase (mhbM),
            and Orf2 genes, complete cds; and Orf3 gene, partial cds
          Length = 8216

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   ggcgctgagctacggcctc 50
            |||||||||||||||||||
Sbjct: 2261 ggcgctgagctacggcctc 2279
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 80      gccggaggagctggacagg 98
               |||||||||||||||||||
Sbjct: 2694570 gccggaggagctggacagg 2694552
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>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
              sequence
          Length = 243313

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 81     ccggaggagctggacagggtcctgaag 107
              |||||||||||||||||| ||| ||||
Sbjct: 221416 ccggaggagctggacaggatccagaag 221442
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>gb|AC140282.3| Mus musculus BAC clone RP24-501L1 from 1, complete sequence
          Length = 206690

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    gggaaagggcaggagcagg 78
             |||||||||||||||||||
Sbjct: 97784 gggaaagggcaggagcagg 97766
to top
>gb|U39514.1|ESU39514 Echinometra sp. clone A-G2 bindin gene, partial cds
          Length = 753

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 68  gcaggagcaggtgccggaggagctgga 94
           |||||||||||||| ||||||| ||||
Sbjct: 601 gcaggagcaggtgcaggaggaggtgga 627
to top
>gb|U39513.1|ESU39513 Echinometra sp. clone A-G1 bindin gene, partial cds
          Length = 756

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 68  gcaggagcaggtgccggaggagctgga 94
           |||||||||||||| ||||||| ||||
Sbjct: 598 gcaggagcaggtgcaggaggaggtgga 624
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>emb|AL627122.18| Mouse DNA sequence from clone RP23-132E8 on chromosome 4, complete
             sequence
          Length = 166814

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    aaagggcaggagcaggtgc 81
             |||||||||||||||||||
Sbjct: 39718 aaagggcaggagcaggtgc 39736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,114,534
Number of Sequences: 3902068
Number of extensions: 1114534
Number of successful extensions: 88642
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87699
Number of HSP's gapped (non-prelim): 943
length of query: 183
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 161
effective length of database: 17,147,199,772
effective search space: 2760699163292
effective search space used: 2760699163292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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