>DNAE2_COREF (Q8FRX6) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1073

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +3

Query: 306 GISHHRGAFSGPGEVRDHPAFDVVPTELARGE 401
           G   H G  SG   + D P  DVVPTE AR E
Sbjct: 525 GQPRHLGIHSGGMVICDRPIADVVPTEWARME 556

>ZN446_HUMAN (Q9NWS9) Zinc finger protein 446|
          Length = 450

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 32/127 (25%), Positives = 41/127 (32%), Gaps = 17/127 (13%)
 Frame = +3

Query: 99  CRVLETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHRRP---- 266
           CR L + ++ +GPP             AA   L    TPA  V  G   +P+   P    
Sbjct: 262 CRSLRSGNESEGPPGCPEAQPPQGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETR 321

Query: 267 ------------CXXXXXXXXXXXXGISHHRGAFSGPGEVRDHPAFDVVPTELARGEE-E 407
                       C             + HHR   SGPG         V    LA GE  E
Sbjct: 322 LEPAATPRKPYTCEQCGRGFDWKSVFVIHHRTHTSGPG---------VQSPGLATGESTE 372

Query: 408 EPRDAEL 428
           +P   E+
Sbjct: 373 KPPQGEV 379

>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 190 TSAAASD*SSWVRRTALGGPWSSEVVSRTR 101
           T+AA  + ++ VRRTA G   +S+VVS TR
Sbjct: 386 TAAALDELTATVRRTAAGARQASDVVSTTR 415

>SYS_HUMAN (P49591) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 513

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 111 ETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHR 260
           E   DD+  P  VL   D  +DA A + +  +    + +DE +L+  + R
Sbjct: 71  EPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAER 120

>AGPA_RHIME (Q9X4Y1) Periplasmic alpha-galactoside-binding protein precursor|
          Length = 693

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -2

Query: 413 GLFLFPAGKLGGHDVE 366
           G   FPAGKLGG DVE
Sbjct: 479 GFVNFPAGKLGGRDVE 494

>QUEF_XANOR (Q5GV34) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 271

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +3

Query: 96  SCRVLETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALL 209
           S   L+ + DD GPPNA  LT   Q     EV   ALL
Sbjct: 137 SIDALDVSIDDYGPPNAAYLTAQAQ-PVVEEVLTSALL 173

>PROB_THIDA (Q3SJS7) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 374

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 117 TSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHRRP 266
           T+D +G  +A L    +Q  A AE     +L  + A+ EG+ RL   +RP
Sbjct: 22  TADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAEGIARLGWKKRP 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,801,693
Number of Sequences: 219361
Number of extensions: 524540
Number of successful extensions: 1621
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)