ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 1e-22
2gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 115 1e-22
3gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 115 1e-22
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
5gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 115 1e-22
6dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
7gb|AY106116.1| Zea mays PCO091367 mRNA sequence 74 4e-10
8dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
9dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
10gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid tran... 54 4e-04
11dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
12ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
14dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
15dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
16dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
17dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
18dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
19ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative... 48 0.025
20emb|CR722992.2|CNS0GKT2 Tetraodon nigroviridis full-length cDNA 48 0.025
21emb|CR722982.2|CNS0GKSS Tetraodon nigroviridis full-length cDNA 48 0.025
22emb|CR714375.2|CNS0GE5V Tetraodon nigroviridis full-length cDNA 48 0.025
23emb|CR713600.2|CNS0GDKC Tetraodon nigroviridis full-length cDNA 48 0.025
24emb|CR705446.2|CNS0G79U Tetraodon nigroviridis full-length cDNA 48 0.025
25emb|CR704705.2|CNS0G6P9 Tetraodon nigroviridis full-length cDNA 48 0.025
26emb|CR699498.2|CNS0G2OM Tetraodon nigroviridis full-length cDNA 48 0.025
27emb|CR689042.2|CNS0FUM6 Tetraodon nigroviridis full-length cDNA 48 0.025
28emb|CR685219.2|CNS0FRNZ Tetraodon nigroviridis full-length cDNA 48 0.025
29emb|CR679206.2|CNS0FN0Y Tetraodon nigroviridis full-length cDNA 48 0.025
30emb|CR668108.2|CNS0FEHE Tetraodon nigroviridis full-length cDNA 48 0.025
31emb|CR652978.2|CNS0F2T4 Tetraodon nigroviridis full-length cDNA 48 0.025
32emb|CR650750.2|CNS0F138 Tetraodon nigroviridis full-length cDNA 48 0.025
33gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 geno... 48 0.025
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
35gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
36gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) ge... 48 0.025
37gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, comple... 48 0.025
38ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
39ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative... 44 0.39
40ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predic... 44 0.39
41ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predic... 44 0.39
42gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid tran... 44 0.39
43emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4,... 44 0.39
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
46dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
47dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
48dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
49dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
50gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, comple... 44 0.39
51gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of t... 42 1.5
52gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence 42 1.5
53emb|X60432.1|ZMPRP Z.mays PRP gene 42 1.5
54gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.5
55gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.5
56gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.5
57gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, co... 42 1.5
58gb|AY105001.1| Zea mays PCO123892 mRNA sequence 42 1.5
59ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative... 40 6.1
60ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative... 40 6.1
61ref|NM_185799.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
62gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.1
63gb|AC167702.2| Reniera sp. JGI-2005 clone JGIBAYC-9C21, complete... 40 6.1
64gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.1
65ref|XM_416189.1| PREDICTED: Gallus gallus similar to Histone H1.... 40 6.1
66ref|XM_590970.2| PREDICTED: Bos taurus similar to ryanodine rece... 40 6.1
67gb|AY548452.1| Fremyella diplosiphon clone 3106E11 putative two ... 40 6.1
68gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.1
69gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
70gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.1
71gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
72ref|XM_984882.1| PREDICTED: Mus musculus RIKEN cDNA 2900002G04 g... 40 6.1
73ref|XM_136135.5| PREDICTED: Mus musculus RIKEN cDNA 2900002G04 g... 40 6.1
74ref|XM_816339.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 6.1
75gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome... 40 6.1
76gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.1
77gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.1
78emb|AL136362.10| Human DNA sequence from clone RP13-136L2 on chr... 40 6.1
79emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.1
80emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 6.1
81gb|AC087341.4| Homo sapiens chromosome 8, clone RP11-381I15, com... 40 6.1
82gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
83dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.1
84gb|AE012321.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.1
85dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
86dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
87gb|AC010685.3|AC010685 Homo sapiens BAC clone RP11-465A8 from Y,... 40 6.1
88dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
89dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
90dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
91gb|AY108363.1| Zea mays PCO069442 mRNA sequence 40 6.1
92gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.1
93dbj|AP005887.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 6.1
94gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.1
95gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.1
96gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
97emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1
98emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chro... 40 6.1
99gb|M17018.1|CHKH1LH Chicken H1 histone gene lambda-H1.10 (.10 H1... 40 6.1
100gb|M81772.1|ERWBGPA Erwinia chrysanthemi putative antiterminator... 40 6.1
101dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, comple... 40 6.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 98     catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 157
              |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 198413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 198472

                                                        
Query: 158    cttcgccgacgcctgcggctgccactgcgggtcctgccctag 199
              |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 198473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 198514



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                             
Query: 422    gtgcccgatcgacgcgctgaagctgggcgtg 452
              |||||||||||||||||||||||||||||||
Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtg 189722



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 422    gtgcccgatcgacgcgctgaagctgggcgtg 452
              ||||||||||||||||||||||||| |||||
Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtg 187018



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 423    tgcccgatcgacgcgctgaagctggg 448
              |||||||||||| |||||||||||||
Sbjct: 198711 tgcccgatcgacacgctgaagctggg 198736
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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 98    catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 157
             |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 35480 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 35539

                                                       
Query: 158   cttcgccgacgcctgcggctgccactgcgggtcctgccctag 199
             |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 35540 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 35581



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 422   gtgcccgatcgacgcgctgaagctgggcgtg 452
             |||||||||||||||||||||||||||||||
Sbjct: 26759 gtgcccgatcgacgcgctgaagctgggcgtg 26789



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 422   gtgcccgatcgacgcgctgaagctgggcgtg 452
             ||||||||||||||||||||||||| |||||
Sbjct: 24055 gtgcccgatcgacgcgctgaagctgagcgtg 24085



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 423   tgcccgatcgacgcgctgaagctggg 448
             |||||||||||| |||||||||||||
Sbjct: 35778 tgcccgatcgacacgctgaagctggg 35803
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 98     catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 157
              |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 132413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 132472

                                                        
Query: 158    cttcgccgacgcctgcggctgccactgcgggtcctgccctag 199
              |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 132473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 132514



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                             
Query: 422    gtgcccgatcgacgcgctgaagctgggcgtg 452
              |||||||||||||||||||||||||||||||
Sbjct: 123692 gtgcccgatcgacgcgctgaagctgggcgtg 123722



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 422    gtgcccgatcgacgcgctgaagctgggcgtg 452
              ||||||||||||||||||||||||| |||||
Sbjct: 120988 gtgcccgatcgacgcgctgaagctgagcgtg 121018



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 423    tgcccgatcgacgcgctgaagctggg 448
              |||||||||||| |||||||||||||
Sbjct: 132711 tgcccgatcgacacgctgaagctggg 132736
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 98     catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 157
              |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 198413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 198472

                                                        
Query: 158    cttcgccgacgcctgcggctgccactgcgggtcctgccctag 199
              |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 198473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 198514



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                             
Query: 422    gtgcccgatcgacgcgctgaagctgggcgtg 452
              |||||||||||||||||||||||||||||||
Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtg 189722



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 422    gtgcccgatcgacgcgctgaagctgggcgtg 452
              ||||||||||||||||||||||||| |||||
Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtg 187018



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 423    tgcccgatcgacgcgctgaagctggg 448
              |||||||||||| |||||||||||||
Sbjct: 198711 tgcccgatcgacacgctgaagctggg 198736
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                         
Query: 98    catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 157
             |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 64243 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 64184

                                                       
Query: 158   cttcgccgacgcctgcggctgccactgcgggtcctgccctag 199
             |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 64183 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 64142



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                            
Query: 422   gtgcccgatcgacgcgctgaagctgggcgtg 452
             |||||||||||||||||||||||||||||||
Sbjct: 72962 gtgcccgatcgacgcgctgaagctgggcgtg 72932



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 422   gtgcccgatcgacgcgctgaagctgggcgtg 452
             ||||||||||||||||||||||||| |||||
Sbjct: 75666 gtgcccgatcgacgcgctgaagctgagcgtg 75636



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 423   tgcccgatcgacgcgctgaagctggg 448
             |||||||||||| |||||||||||||
Sbjct: 63945 tgcccgatcgacacgctgaagctggg 63920
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>dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H06, full
           insert sequence
          Length = 745

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 98  catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 157
           |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 88  catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 147

                                                     
Query: 158 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 199
           |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 148 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 189
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>gb|AY106116.1| Zea mays PCO091367 mRNA sequence
          Length = 842

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 123 gccacgctgctggccctgaacctcctcttcttcaccttcgccgacgcctgcggctgc 179
           ||||| ||||||||||| ||||||||||||||  ||||||||||||| |||||||||
Sbjct: 8   gccactctgctggccctcaacctcctcttctttgccttcgccgacgcatgcggctgc 64



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 432 gacgcgctgaagctgggcgtg 452
           |||||||||||||||||||||
Sbjct: 326 gacgcgctgaagctgggcgtg 346
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>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full
           insert sequence
          Length = 498

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 422 gtgcccgatcgacgcgctgaagctgggcgtg 452
           |||||||||||||||||||||||||||||||
Sbjct: 116 gtgcccgatcgacgcgctgaagctgggcgtg 146
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>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full
           insert sequence
          Length = 736

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 422 gtgcccgatcgacgcgctgaagctgggcgtg 452
           |||||||||||||||||||||||||||||||
Sbjct: 264 gtgcccgatcgacgcgctgaagctgggcgtg 294
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>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like
           protein (LTP1) mRNA, complete cds
          Length = 772

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 422 gtgcccgatcgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||||| |||||
Sbjct: 282 gtgcccgatcgacgcgctgaagctgagcgtg 312
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>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full
           insert sequence
          Length = 780

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 422 gtgcccgatcgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||||| |||||
Sbjct: 303 gtgcccgatcgacgcgctgaagctgagcgtg 333
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>ref|XM_550375.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 992

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           |||||||||||||||||||||||||
Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 422     gtgcccgatcgacgcgctgaagctg 446
               |||||||||||||||||||||||||
Sbjct: 3455297 gtgcccgatcgacgcgctgaagctg 3455273



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 167     cgcctgcggctgccactgcg 186
               ||||||||||||||||||||
Sbjct: 9355989 cgcctgcggctgccactgcg 9355970
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 422   gtgcccgatcgacgcgctgaagctg 446
             |||||||||||||||||||||||||
Sbjct: 72001 gtgcccgatcgacgcgctgaagctg 71977
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 422    gtgcccgatcgacgcgctgaagctg 446
              |||||||||||||||||||||||||
Sbjct: 146851 gtgcccgatcgacgcgctgaagctg 146827
to top
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
           insert sequence
          Length = 1013

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           |||||||||||||||||||||||||
Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
to top
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
           insert sequence
          Length = 992

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           |||||||||||||||||||||||||
Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
to top
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
           insert sequence
          Length = 1384

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           |||||||||||||||||||||||||
Sbjct: 925 gtgcccgatcgacgcgctgaagctg 949
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>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
           protein (OSJNBa0015J15.16), mRNA
          Length = 441

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 423 tgcccgatcgacgcgctgaagctg 446
           ||||||||||||||||||||||||
Sbjct: 193 tgcccgatcgacgcgctgaagctg 216
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>emb|CR722992.2|CNS0GKT2 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR722982.2|CNS0GKSS Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR714375.2|CNS0GE5V Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR713600.2|CNS0GDKC Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR705446.2|CNS0G79U Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR704705.2|CNS0G6P9 Tetraodon nigroviridis full-length cDNA
          Length = 496

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR699498.2|CNS0G2OM Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR689042.2|CNS0FUM6 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR685219.2|CNS0FRNZ Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR679206.2|CNS0FN0Y Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR668108.2|CNS0FEHE Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR652978.2|CNS0F2T4 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
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>emb|CR650750.2|CNS0F138 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  aggaagaaggaagccatggcgaag 107
           ||||||||||||||||||||||||
Sbjct: 45  aggaagaaggaagccatggcgaag 22
to top
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
             sequence
          Length = 144798

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 423   tgcccgatcgacgcgctgaagctg 446
             ||||||||||||||||||||||||
Sbjct: 66285 tgcccgatcgacgcgctgaagctg 66308



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 422   gtgcccgatcgacgcgctgaagctgg 447
             ||||||| ||||||||||||||||||
Sbjct: 68897 gtgcccgttcgacgcgctgaagctgg 68922



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 423   tgcccgatcgacgcgctgaagctg 446
             |||||||||||||| |||||||||
Sbjct: 49761 tgcccgatcgacgccctgaagctg 49784
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 423      tgcccgatcgacgcgctgaagctg 446
                ||||||||||||||||||||||||
Sbjct: 21139421 tgcccgatcgacgcgctgaagctg 21139398



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 422      gtgcccgatcgacgcgctgaagctgg 447
                ||||||| ||||||||||||||||||
Sbjct: 21136809 gtgcccgttcgacgcgctgaagctgg 21136784



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 423      tgcccgatcgacgcgctgaagctg 446
                |||||||||||||| |||||||||
Sbjct: 21155945 tgcccgatcgacgccctgaagctg 21155922



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 423      tgcccgatcgacgcgctgaagctg 446
                |||||||||||||| |||||||||
Sbjct: 10072477 tgcccgatcgacgccctgaagctg 10072454
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 423      tgcccgatcgacgcgctgaagctg 446
                ||||||||||||||||||||||||
Sbjct: 21150685 tgcccgatcgacgcgctgaagctg 21150662



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 422      gtgcccgatcgacgcgctgaagctgg 447
                ||||||| ||||||||||||||||||
Sbjct: 21148073 gtgcccgttcgacgcgctgaagctgg 21148048



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 423      tgcccgatcgacgcgctgaagctg 446
                |||||||||||||| |||||||||
Sbjct: 21167209 tgcccgatcgacgccctgaagctg 21167186



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 423      tgcccgatcgacgcgctgaagctg 446
                |||||||||||||| |||||||||
Sbjct: 10078516 tgcccgatcgacgccctgaagctg 10078493
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>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds
          Length = 2252

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 423  tgcccgatcgacgcgctgaagctg 446
            ||||||||||||||||||||||||
Sbjct: 1849 tgcccgatcgacgcgctgaagctg 1872
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>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds
          Length = 654

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 423 tgcccgatcgacgcgctgaagctg 446
           ||||||||||||||||||||||||
Sbjct: 237 tgcccgatcgacgcgctgaagctg 260
to top
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 cgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||
Sbjct: 261 cgacgcgctgaagctgggcgtg 282
to top
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
           protein (OSJNBa0015J15.17), mRNA
          Length = 489

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 422 gtgcccgatcgacgcgctgaagctgg 447
           ||||||| ||||||||||||||||||
Sbjct: 189 gtgcccgttcgacgcgctgaagctgg 214
to top
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 396

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 cgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||
Sbjct: 153 cgacgcgctgaagctgggcgtg 174
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>ref|XM_473448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 393

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 cgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||
Sbjct: 153 cgacgcgctgaagctgggcgtg 174
to top
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like
           protein (LTP2) mRNA, complete cds
          Length = 758

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 cgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||
Sbjct: 228 cgacgcgctgaagctgggcgtg 249
to top
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
              complete sequence
          Length = 173522

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 431    cgacgcgctgaagctgggcgtg 452
              ||||||||||||||||||||||
Sbjct: 147400 cgacgcgctgaagctgggcgtg 147421



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 431    cgacgcgctgaagctgggcgtg 452
              ||||||||||||||||||||||
Sbjct: 144200 cgacgcgctgaagctgggcgtg 144221
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 431      cgacgcgctgaagctgggcgtg 452
                ||||||||||||||||||||||
Sbjct: 27716774 cgacgcgctgaagctgggcgtg 27716795



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 431      cgacgcgctgaagctgggcgtg 452
                ||||||||||||||||||||||
Sbjct: 27713574 cgacgcgctgaagctgggcgtg 27713595
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 431      cgacgcgctgaagctgggcgtg 452
                ||||||||||||||||||||||
Sbjct: 26823741 cgacgcgctgaagctgggcgtg 26823762
to top
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1001_D02
          Length = 129081

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  cgacgcgctgaagctgggcgtg 452
            ||||||||||||||||||||||
Sbjct: 2284 cgacgcgctgaagctgggcgtg 2305
to top
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516F12
          Length = 146364

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 431   cgacgcgctgaagctgggcgtg 452
             ||||||||||||||||||||||
Sbjct: 89794 cgacgcgctgaagctgggcgtg 89815
to top
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full
           insert sequence
          Length = 833

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 cgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||
Sbjct: 261 cgacgcgctgaagctgggcgtg 282
to top
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full
           insert sequence
          Length = 764

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 422 gtgcccgatcgacgcgctgaagctgg 447
           ||||||| ||||||||||||||||||
Sbjct: 268 gtgcccgttcgacgcgctgaagctgg 293
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>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds
          Length = 715

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 cgacgcgctgaagctgggcgtg 452
           ||||||||||||||||||||||
Sbjct: 186 cgacgcgctgaagctgggcgtg 207
to top
>gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of the complete genome
          Length = 11173

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 423  tgcccgatcgacgcgctgaag 443
            |||||||||||||||||||||
Sbjct: 2279 tgcccgatcgacgcgctgaag 2299
to top
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence
          Length = 1282

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           ||||||||||||| |||||||||||
Sbjct: 636 gtgcccgatcgacacgctgaagctg 660
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>emb|X60432.1|ZMPRP Z.mays PRP gene
          Length = 1402

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           ||||||||||||| |||||||||||
Sbjct: 762 gtgcccgatcgacacgctgaagctg 786
to top
>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 328
            of 460 of the complete genome
          Length = 13708

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 111  gcggcggtgatcgccacgctg 131
            |||||||||||||||||||||
Sbjct: 4736 gcggcggtgatcgccacgctg 4716
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 399    ggcggatcaggcgggctcgcg 419
              |||||||||||||||||||||
Sbjct: 441672 ggcggatcaggcgggctcgcg 441652
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 111     gcggcggtgatcgccacgctg 131
               |||||||||||||||||||||
Sbjct: 1332296 gcggcggtgatcgccacgctg 1332316



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 170     ctgcggctgccactgcgggt 189
               ||||||||||||||||||||
Sbjct: 2379043 ctgcggctgccactgcgggt 2379024
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>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence
          Length = 29585

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 388   gcggtggcggtggcggatcaggcgg 412
             ||||||||||||||||||| |||||
Sbjct: 16501 gcggtggcggtggcggatccggcgg 16477
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>gb|AY105001.1| Zea mays PCO123892 mRNA sequence
          Length = 1144

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 422 gtgcccgatcgacgcgctgaagctg 446
           ||||||||||||| |||||||||||
Sbjct: 423 gtgcccgatcgacacgctgaagctg 447
to top
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
           protein (OSJNBa0015J15.11), mRNA
          Length = 411

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 423 tgcccgatcgacgcgctgaagctg 446
           |||||||||||||| |||||||||
Sbjct: 163 tgcccgatcgacgccctgaagctg 186
to top
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer
           protein (OSJNAb0078C13.15), mRNA
          Length = 381

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 423 tgcccgatcgacgcgctgaagctg 446
           |||||||||||||| |||||||||
Sbjct: 130 tgcccgatcgacgccctgaagctg 153
to top
>ref|NM_185799.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 375

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cgcctgcggctgccactgcg 186
           ||||||||||||||||||||
Sbjct: 366 cgcctgcggctgccactgcg 347
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gcggcggtgatcgccacgct 130
              ||||||||||||||||||||
Sbjct: 929082 gcggcggtgatcgccacgct 929063
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>gb|AC167702.2| Reniera sp. JGI-2005 clone JGIBAYC-9C21, complete sequence
          Length = 38590

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  ctcctcttcttcaccttcgc 163
            ||||||||||||||||||||
Sbjct: 4961 ctcctcttcttcaccttcgc 4980
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 101     ggcgaagaaggcggcggtgatcgc 124
               ||||||||||||||||| ||||||
Sbjct: 3344404 ggcgaagaaggcggcggcgatcgc 3344381
to top
>ref|XM_416189.1| PREDICTED: Gallus gallus similar to Histone H1.10 (Methylated DNA
           binding protein-2-H1) (MDBP-2-H1) (LOC417948), mRNA
          Length = 697

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 90  aaggaagccatggcgaagaaggcggcgg 117
           |||| ||||| |||||||||||||||||
Sbjct: 659 aaggcagccaaggcgaagaaggcggcgg 686
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>ref|XM_590970.2| PREDICTED: Bos taurus similar to ryanodine receptor 1 (skeletal)
            (LOC513307), partial mRNA
          Length = 6741

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 141  aacctcctcttcttcaccttcgcc 164
            |||||||||||||||| |||||||
Sbjct: 5703 aacctcctcttcttcagcttcgcc 5680
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>gb|AY548452.1| Fremyella diplosiphon clone 3106E11 putative two component hybrid
            sensor regulator gene, partial cds; and putative two
            component hybrid sensor kinase, TorS-like protein, and
            RsbS-like protein genes, complete cds
          Length = 5596

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  gcctgcggctgccactgcgg 187
            ||||||||||||||||||||
Sbjct: 4321 gcctgcggctgccactgcgg 4302
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 390     ggtggcggtggcggatcagg 409
               ||||||||||||||||||||
Sbjct: 1766490 ggtggcggtggcggatcagg 1766509
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>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   gcagcggtggcggtggcgga 404
             ||||||||||||||||||||
Sbjct: 11731 gcagcggtggcggtggcgga 11750
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    ggcgaagaaggcggcggtgatcgc 124
              ||||||||||||||||| ||||||
Sbjct: 642232 ggcgaagaaggcggcggcgatcgc 642255
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   gcagcggtggcggtggcgga 404
             ||||||||||||||||||||
Sbjct: 78632 gcagcggtggcggtggcgga 78651
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>ref|XM_984882.1| PREDICTED: Mus musculus RIKEN cDNA 2900002G04 gene (2900002G04Rik),
           mRNA
          Length = 3854

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 gcagcggtggcggtggcgga 404
           ||||||||||||||||||||
Sbjct: 187 gcagcggtggcggtggcgga 206
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>ref|XM_136135.5| PREDICTED: Mus musculus RIKEN cDNA 2900002G04 gene, transcript
           variant 1 (2900002G04Rik), mRNA
          Length = 3854

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 gcagcggtggcggtggcgga 404
           ||||||||||||||||||||
Sbjct: 187 gcagcggtggcggtggcgga 206
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>ref|XM_816339.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508163.70) partial mRNA
          Length = 10443

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  gcagcggtggcggtggcgga 404
            ||||||||||||||||||||
Sbjct: 4945 gcagcggtggcggtggcgga 4926
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>gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome 1, complete sequence
          Length = 182270

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tggtaggaagaaggaagcca 99
             ||||||||||||||||||||
Sbjct: 93277 tggtaggaagaaggaagcca 93258
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     ggtgatcgccacgctgctgg 135
               ||||||||||||||||||||
Sbjct: 2625787 ggtgatcgccacgctgctgg 2625806
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 100     tggcgaagaaggcggcggtg 119
               ||||||||||||||||||||
Sbjct: 4051888 tggcgaagaaggcggcggtg 4051869
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>emb|AL136362.10| Human DNA sequence from clone RP13-136L2 on chromosome X Contains a
             eukaryotic translation initiation factor 4A, isoform 1
             (EIF4A1) pseudogene, complete sequence
          Length = 135240

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    cagagtgagctctgtctaaa 36
             ||||||||||||||||||||
Sbjct: 35715 cagagtgagctctgtctaaa 35734
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    ggcgaagaaggcggcggtgatcgc 124
              ||||||||||||||||| ||||||
Sbjct: 450825 ggcgaagaaggcggcggcgatcgc 450848
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    ccttcgccgacgcctgcggc 176
              ||||||||||||||||||||
Sbjct: 290253 ccttcgccgacgcctgcggc 290234
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>gb|AC087341.4| Homo sapiens chromosome 8, clone RP11-381I15, complete sequence
          Length = 177835

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 47    gcacagcagctagtgagaggcagg 70
             |||||||||| |||||||||||||
Sbjct: 51184 gcacagcagcaagtgagaggcagg 51207
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>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0078C13, complete sequence
          Length = 146538

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   tgcccgatcgacgcgctgaagctg 446
             |||||||||||||| |||||||||
Sbjct: 89236 tgcccgatcgacgccctgaagctg 89213
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 427    cgatcgacgcgctgaagctgggcg 450
              |||||| |||||||||||||||||
Sbjct: 562027 cgatcgccgcgctgaagctgggcg 562004
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>gb|AE012321.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 229
            of 460 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  ctgcggctgccactgcgggt 189
            ||||||||||||||||||||
Sbjct: 5534 ctgcggctgccactgcgggt 5553
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 102      gcgaagaaggcggcggtgatcgcc 125
                |||||||||||||||| |||||||
Sbjct: 25872659 gcgaagaaggcggcggcgatcgcc 25872636
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 385     gcagcggtggcggtggcgga 404
               ||||||||||||||||||||
Sbjct: 6707470 gcagcggtggcggtggcgga 6707489
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>gb|AC010685.3|AC010685 Homo sapiens BAC clone RP11-465A8 from Y, complete sequence
          Length = 160302

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cagagtgagctctgtctaaa 36
              ||||||||||||||||||||
Sbjct: 142114 cagagtgagctctgtctaaa 142133
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>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0676F10
          Length = 142510

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    cgcctgcggctgccactgcg 186
              ||||||||||||||||||||
Sbjct: 123330 cgcctgcggctgccactgcg 123311
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>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0038C05
          Length = 152941

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   cgcctgcggctgccactgcg 186
             ||||||||||||||||||||
Sbjct: 84399 cgcctgcggctgccactgcg 84380
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>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full
           insert sequence
          Length = 662

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 423 tgcccgatcgacgcgctgaagctg 446
           |||||||||||||| |||||||||
Sbjct: 192 tgcccgatcgacgccctgaagctg 215
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>gb|AY108363.1| Zea mays PCO069442 mRNA sequence
          Length = 837

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 acgcgctgaagctgggcgtg 452
           ||||||||||||||||||||
Sbjct: 228 acgcgctgaagctgggcgtg 247
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 427    cgatcgacgcgctgaagctgggcg 450
              |||||| |||||||||||||||||
Sbjct: 574146 cgatcgccgcgctgaagctgggcg 574123
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>dbj|AP005887.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1252A6, complete
              sequence
          Length = 149431

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     gcacagcagctagtgagaggcagg 70
              |||||||||| |||||||||||||
Sbjct: 116607 gcacagcagcaagtgagaggcagg 116630
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 110    ggcggcggtgatcgccacgctgctggcc 137
              ||||||| || |||||||||||||||||
Sbjct: 227339 ggcggcgctgttcgccacgctgctggcc 227366
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 431     cgacgcgctgaagctgggcg 450
               ||||||||||||||||||||
Sbjct: 2187376 cgacgcgctgaagctgggcg 2187357
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 102      gcgaagaaggcggcggtgatcgcc 125
                |||||||||||||||| |||||||
Sbjct: 25800835 gcgaagaaggcggcggcgatcgcc 25800812
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>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   gcgaagaaggcggcggtgatcgcc 125
             |||||||||||||||| |||||||
Sbjct: 94110 gcgaagaaggcggcggcgatcgcc 94087
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>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete
             sequence
          Length = 227918

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   gcagcggtggcggtggcgga 404
             ||||||||||||||||||||
Sbjct: 11661 gcagcggtggcggtggcgga 11680
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>gb|M17018.1|CHKH1LH Chicken H1 histone gene lambda-H1.10 (.10 H1), complete cds and
           promoters
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 90  aaggaagccatggcgaagaaggcggcgg 117
           |||| ||||| |||||||||||||||||
Sbjct: 872 aaggcagccaaggcgaagaaggcggcgg 899
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>gb|M81772.1|ERWBGPA Erwinia chrysanthemi putative antiterminator (argG) gene, complete
            cds; beta-glucoside permease (arbF) gene, complete cds;
            phospho- beta-glucosidase (arbB) gene, complete cds;
            unidentified open reading frame, 5' end
          Length = 5065

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 110  ggcggcggtgatcgccacgctgctggcc 137
            |||||||||||||| ||||||| |||||
Sbjct: 2642 ggcggcggtgatcggcacgctgttggcc 2669
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>dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, complete cds
          Length = 3331

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 393  ggcggtggcggatcaggcgg 412
            ||||||||||||||||||||
Sbjct: 2156 ggcggtggcggatcaggcgg 2175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,316,268
Number of Sequences: 3902068
Number of extensions: 2316268
Number of successful extensions: 65889
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63872
Number of HSP's gapped (non-prelim): 2017
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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