>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6|
          Length = 880

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 77  GDADXGNASTTPRPAARVHGRDRERGEDAD 166
           G  D G  S TP P A  H R+RER  + +
Sbjct: 529 GMPDAGGHSATPSPTAAYHKRERERERERE 558

>HSP7C_TRYBB (P20030) Heat shock cognate HSP70 protein|
          Length = 676

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 116 PAARVHGRDRERGEDADAGVHPGGPVQHGRPWRGH 220
           PA +   R+  RG+   + VHP   V +G  W+ H
Sbjct: 348 PAVQAQLRELFRGKQLCSSVHPDEAVAYGAAWQAH 382

>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2|
          Length = 959

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 83  ADXGNASTTPRPAARVHGRDRERGEDADAGVHPGGPVQHGRPWRGHPQ 226
           A+   A   P+P AR      ER +DA    +   P Q GRP  G PQ
Sbjct: 219 AEEEAAKRMPQPEAR-----SERRDDARPAPYGARPQQAGRPQGGRPQ 261

>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2|
          Length = 959

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 83  ADXGNASTTPRPAARVHGRDRERGEDADAGVHPGGPVQHGRPWRGHPQ 226
           A+   A   P+P AR      ER +DA    +   P Q GRP  G PQ
Sbjct: 219 AEEEAAKRMPQPEAR-----SERRDDARPAPYGARPQQAGRPQGGRPQ 261

>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2|
          Length = 959

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 83  ADXGNASTTPRPAARVHGRDRERGEDADAGVHPGGPVQHGRPWRGHPQ 226
           A+   A   P+P AR      ER +DA    +   P Q GRP  G PQ
Sbjct: 219 AEEEAAKRMPQPEAR-----SERRDDARPAPYGARPQQAGRPQGGRPQ 261

>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2|
          Length = 959

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 83  ADXGNASTTPRPAARVHGRDRERGEDADAGVHPGGPVQHGRPWRGHPQ 226
           A+   A   P+P AR      ER +DA    +   P Q GRP  G PQ
Sbjct: 219 AEEEAAKRMPQPEAR-----SERRDDARPAPYGARPQQAGRPQGGRPQ 261

>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor|
          Length = 688

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 113 RPAARVHGRDRERGEDADAGVHPGGPVQHGRPWRGHP 223
           RP   ++G+D +RG        PG P + GRP R  P
Sbjct: 627 RPGQAINGKDGDRGS-------PGAPGEAGRPGRPGP 656


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,385,636
Number of Sequences: 219361
Number of extensions: 534274
Number of successful extensions: 2750
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2742
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)