ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470487.1| Oryza sativa (japonica cultivar-group), mRNA 64 4e-07
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 4e-07
3gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 64 4e-07
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
5dbj|AK100733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
6dbj|AK061073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
7emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 50 0.006
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
9dbj|AK068009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
10ref|XM_470485.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.098
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
12dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
13dbj|AK072880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.098
14emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 44 0.39
15gb|BC068367.1| Danio rerio nucleoporin like 1, mRNA (cDNA clone ... 42 1.5
16gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 42 1.5
17ref|XM_473963.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
18gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.5
19gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.5
20emb|CR383672.6| Zebrafish DNA sequence from clone DKEY-11P10 in ... 42 1.5
21emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.5
22emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.5
23emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
24emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
25ref|NM_213229.1| Danio rerio nucleoporin like 1 (nupl1), mRNA 42 1.5
26gb|BC098882.1| Danio rerio nucleoporin like 1, mRNA (cDNA clone ... 42 1.5
27gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.5
28dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.5
29gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC... 42 1.5
30ref|XM_523193.1| PREDICTED: Pan troglodytes similar to eukaryoti... 40 6.1
31ref|XM_471008.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
32gb|AC144709.2| Danio rerio clone CH211-204P11, complete sequence 40 6.1
33ref|XM_813502.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.1
34emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in ... 40 6.1
35ref|XM_538474.2| PREDICTED: Canis familiaris similar to pleckstr... 40 6.1
36gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.1
37gb|AY225409.1| Streptomyces sp. CH7 ABC-type sugar transport sys... 40 6.1
38emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 6.1
39emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
40emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
41emb|AL132792.2|DMBR19J1 Drosophila melanogaster BAC clone BACR19J1 40 6.1
42gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell ... 40 6.1
43ref|NM_130498.1| Drosophila melanogaster CG13362-RA (CG13362), mRNA 40 6.1
44gb|AY089641.1| Drosophila melanogaster RE65335 full insert cDNA 40 6.1
45ref|XM_691670.1| PREDICTED: Danio rerio similar to CG11210-PA (L... 40 6.1
46emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 ... 40 6.1
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
48dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
49gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.1
50dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
51emb|AL953899.7| Zebrafish DNA sequence from clone CH211-233N24, ... 40 6.1
52dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
53dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
54emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in... 40 6.1
55emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.1
56gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o... 40 6.1
57emb|CR812957.13| Zebrafish DNA sequence from clone DKEY-41L5 in ... 40 6.1
58emb|BX927093.8| Zebrafish DNA sequence from clone DKEY-53P2 in l... 40 6.1 
>ref|XM_470487.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 801

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 234 tgggacggcgtggtgccgcgggagtgcgccccgtcgccgcgcacgctccgcctctcgccg 293
           ||||||||||||||||||| ||||||||||||||| || ||||  |||||  | || || 
Sbjct: 154 tgggacggcgtggtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccct 213

                                                                       
Query: 294 tccctccgctgggaggaggcccgggagccgctgcacgagggcatcgacgtcggcnacgtg 353
              ||||| |||||||| || |||||||| || ||||  ||||||||||||  | |||||
Sbjct: 214 gagctccggtgggaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtg 273

                                              
Query: 354 ctgggggtcggccccggcatgccgttcgcgcacgc 388
           || || || ||||| || ||| | ||||| |||||
Sbjct: 274 ctcggcgtgggcccggggatgtccttcgcccacgc 308



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 421 ccgtcgtcggcctcgtcccctgcgcccaggg 451
           ||||| |||||||||||||||||||||||||
Sbjct: 335 ccgtcatcggcctcgtcccctgcgcccaggg 365
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                            
Query: 234      tgggacggcgtggtgccgcgggagtgcgccccgtcgccgcgcacgctccgcctctcgccg 293
                ||||||||||||||||||| ||||||||||||||| || ||||  |||||  | || || 
Sbjct: 35885676 tgggacggcgtggtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccct 35885735

                                                                            
Query: 294      tccctccgctgggaggaggcccgggagccgctgcacgagggcatcgacgtcggcnacgtg 353
                   ||||| |||||||| || |||||||| || ||||  ||||||||||||  | |||||
Sbjct: 35885736 gagctccggtgggaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtg 35885795

                                                   
Query: 354      ctgggggtcggccccggcatgccgttcgcgcacgc 388
                || || || ||||| || ||| | ||||| |||||
Sbjct: 35885796 ctcggcgtgggcccggggatgtccttcgcccacgc 35885830



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 421      ccgtcgtcggcctcgtcccctgcgcccaggg 451
                ||||| |||||||||||||||||||||||||
Sbjct: 35885857 ccgtcatcggcctcgtcccctgcgcccaggg 35885887



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 279      ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
                ||||||||||| |||   ||||| |||||||||||||  |||||||| ||| | ||||||
Sbjct: 35882284 ctccgcctctccccgcagctccgatgggaggaggcccacgagccgctccacaacggcatc 35882225

                   
Query: 339      gac 341
                |||
Sbjct: 35882224 gac 35882222



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 427      tcggcctcgtcccctgcgcc 446
                ||||||||||||||||||||
Sbjct: 35882145 tcggcctcgtcccctgcgcc 35882126
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 124/155 (80%)
 Strand = Plus / Minus

                                                                         
Query: 234   tgggacggcgtggtgccgcgggagtgcgccccgtcgccgcgcacgctccgcctctcgccg 293
             ||||||||||||||||||| ||||||||||||||| || ||||  |||||  | || || 
Sbjct: 75449 tgggacggcgtggtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccct 75390

                                                                         
Query: 294   tccctccgctgggaggaggcccgggagccgctgcacgagggcatcgacgtcggcnacgtg 353
                ||||| |||||||| || |||||||| || ||||  ||||||||||||  | |||||
Sbjct: 75389 gagctccggtgggaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtg 75330

                                                
Query: 354   ctgggggtcggccccggcatgccgttcgcgcacgc 388
             || || || ||||| || ||| | ||||| |||||
Sbjct: 75329 ctcggcgtgggcccggggatgtccttcgcccacgc 75295



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 421   ccgtcgtcggcctcgtcccctgcgcccaggg 451
             ||||| |||||||||||||||||||||||||
Sbjct: 75268 ccgtcatcggcctcgtcccctgcgcccaggg 75238



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 279   ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
             ||||||||||| |||   ||||| |||||||||||||  |||||||| ||| | ||||||
Sbjct: 78841 ctccgcctctccccgcagctccgatgggaggaggcccacgagccgctccacaacggcatc 78900

                
Query: 339   gac 341
             |||
Sbjct: 78901 gac 78903



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   tcggcctcgtcccctgcgcc 446
             ||||||||||||||||||||
Sbjct: 78980 tcggcctcgtcccctgcgcc 78999
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                            
Query: 234      tgggacggcgtggtgccgcgggagtgcgccccgtcgccgcgcacgctccgcctctcgccg 293
                ||||||||||||||||||| ||||||||||||||| || ||||  |||||  | || || 
Sbjct: 35975806 tgggacggcgtggtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccct 35975865

                                                                            
Query: 294      tccctccgctgggaggaggcccgggagccgctgcacgagggcatcgacgtcggcnacgtg 353
                   ||||| |||||||| || |||||||| || ||||  ||||||||||||  | |||||
Sbjct: 35975866 gagctccggtgggaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtg 35975925

                                                   
Query: 354      ctgggggtcggccccggcatgccgttcgcgcacgc 388
                || || || ||||| || ||| | ||||| |||||
Sbjct: 35975926 ctcggcgtgggcccggggatgtccttcgcccacgc 35975960



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 421      ccgtcgtcggcctcgtcccctgcgcccaggg 451
                ||||| |||||||||||||||||||||||||
Sbjct: 35975987 ccgtcatcggcctcgtcccctgcgcccaggg 35976017



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 279      ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
                ||||||||||| |||   ||||| |||||||||||||  |||||||| ||| | ||||||
Sbjct: 35972414 ctccgcctctccccgcagctccgatgggaggaggcccacgagccgctccacaacggcatc 35972355

                   
Query: 339      gac 341
                |||
Sbjct: 35972354 gac 35972352



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 427      tcggcctcgtcccctgcgcc 446
                ||||||||||||||||||||
Sbjct: 35972275 tcggcctcgtcccctgcgcc 35972256
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>dbj|AK100733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117O12, full
           insert sequence
          Length = 1119

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 234 tgggacggcgtggtgccgcgggagtgcgccccgtcgccgcgcacgctccgcctctcgccg 293
           ||||||||||||||||||| ||||||||||||||| || ||||  |||||  | || || 
Sbjct: 303 tgggacggcgtggtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccct 362

                                                                       
Query: 294 tccctccgctgggaggaggcccgggagccgctgcacgagggcatcgacgtcggcnacgtg 353
              ||||| |||||||| || |||||||| || ||||  ||||||||||||  | |||||
Sbjct: 363 gagctccggtgggaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtg 422

                                              
Query: 354 ctgggggtcggccccggcatgccgttcgcgcacgc 388
           || || || ||||| || ||| | ||||| |||||
Sbjct: 423 ctcggcgtgggcccggggatgtccttcgcccacgc 457



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 421 ccgtcgtcggcctcgtcccctgcgcccaggg 451
           ||||| |||||||||||||||||||||||||
Sbjct: 484 ccgtcatcggcctcgtcccctgcgcccaggg 514
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>dbj|AK061073.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D05, full
           insert sequence
          Length = 1106

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 234 tgggacggcgtggtgccgcgggagtgcgccccgtcgccgcgcacgctccgcctctcgccg 293
           ||||||||||||||||||| ||||||||||||||| || ||||  |||||  | || || 
Sbjct: 304 tgggacggcgtggtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccct 363

                                                                       
Query: 294 tccctccgctgggaggaggcccgggagccgctgcacgagggcatcgacgtcggcnacgtg 353
              ||||| |||||||| || |||||||| || ||||  ||||||||||||  | |||||
Sbjct: 364 gagctccggtgggaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtg 423

                                              
Query: 354 ctgggggtcggccccggcatgccgttcgcgcacgc 388
           || || || ||||| || ||| | ||||| |||||
Sbjct: 424 ctcggcgtgggcccggggatgtccttcgcccacgc 458



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 421 ccgtcgtcggcctcgtcccctgcgcccaggg 451
           ||||| |||||||||||||||||||||||||
Sbjct: 485 ccgtcatcggcctcgtcccctgcgcccaggg 515
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>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 231   cgctgggacggcgtggtgccgcgggagtgcgccccgt 267
             |||||||||||||| ||||||| ||||||||| ||||
Sbjct: 59849 cgctgggacggcgtcgtgccgccggagtgcgcgccgt 59813



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 425   cgtcggcctcgtcccctgcgcc 446
             ||||||||||||||||||||||
Sbjct: 59658 cgtcggcctcgtcccctgcgcc 59637
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 231      cgctgggacggcgtggtgccgcgggagtgcgccccgt 267
                |||||||||||||| ||||||| ||||||||| ||||
Sbjct: 11738393 cgctgggacggcgtcgtgccgccggagtgcgcgccgt 11738357



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 425      cgtcggcctcgtcccctgcgcc 446
                ||||||||||||||||||||||
Sbjct: 11738202 cgtcggcctcgtcccctgcgcc 11738181



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      gctgcacgagggcatcgacgt 343
                |||||||||||||||||||||
Sbjct: 31852411 gctgcacgagggcatcgacgt 31852431



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     cgctccgcctctcgccgtcc 296
               ||||||||||||||||||||
Sbjct: 7068818 cgctccgcctctcgccgtcc 7068799



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 186    ggccagtccaacatgggcggccgtggcg 213
              |||||||||||||||| |||||| ||||
Sbjct: 600879 ggccagtccaacatggccggccgcggcg 600906
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>dbj|AK068009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H13, full
           insert sequence
          Length = 1112

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 231 cgctgggacggcgtggtgccgcgggagtgcgccccgt 267
           |||||||||||||| ||||||| ||||||||| ||||
Sbjct: 115 cgctgggacggcgtcgtgccgccggagtgcgcgccgt 151



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 425 cgtcggcctcgtcccctgcgcc 446
           ||||||||||||||||||||||
Sbjct: 306 cgtcggcctcgtcccctgcgcc 327
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>ref|XM_470485.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 903

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 279 ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
           ||||||||||| |||   ||||| |||||||||||||  |||||||| ||| | ||||||
Sbjct: 184 ctccgcctctccccgcagctccgatgggaggaggcccacgagccgctccacaacggcatc 243

              
Query: 339 gac 341
           |||
Sbjct: 244 gac 246



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 tcggcctcgtcccctgcgcc 446
           ||||||||||||||||||||
Sbjct: 323 tcggcctcgtcccctgcgcc 342
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 279      ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
                ||||||||||| ||||  ||||| ||||||||| |||  |||||||| ||| | ||||||
Sbjct: 30584393 ctccgcctctccccgtagctccgatgggaggagccccacgagccgctccaccatggcatc 30584452

                   
Query: 339      gac 341
                |||
Sbjct: 30584453 gac 30584455



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 39       caccaccagtaccacctccc 58
                ||||||||||||||||||||
Sbjct: 25534919 caccaccagtaccacctccc 25534938
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>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0069C14
          Length = 150579

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 279   ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
             ||||||||||| ||||  ||||| ||||||||| |||  |||||||| ||| | ||||||
Sbjct: 82956 ctccgcctctccccgtagctccgatgggaggagccccacgagccgctccaccatggcatc 83015

                
Query: 339   gac 341
             |||
Sbjct: 83016 gac 83018
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>dbj|AK072880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146D23, full
           insert sequence
          Length = 898

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 279 ctccgcctctcgccgtccctccgctgggaggaggcccgggagccgctgcacgagggcatc 338
           ||||||||||| |||   ||||| |||||||||||||  |||||||| ||| | ||||||
Sbjct: 165 ctccgcctctccccgcagctccgatgggaggaggcccacgagccgctccacaacggcatc 224

              
Query: 339 gac 341
           |||
Sbjct: 225 gac 227



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 tcggcctcgtcccctgcgcc 446
           ||||||||||||||||||||
Sbjct: 304 tcggcctcgtcccctgcgcc 323
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 143    cgcgagcgcggcgaggacgccgacgc 168
              |||| |||||||||||||||||||||
Sbjct: 205947 cgcgggcgcggcgaggacgccgacgc 205972
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>gb|BC068367.1| Danio rerio nucleoporin like 1, mRNA (cDNA clone MGC:85711
           IMAGE:6965948), complete cds
          Length = 2111

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 37  gccaccaccagtaccacctcc 57
           |||||||||||||||||||||
Sbjct: 410 gccaccaccagtaccacctcc 430
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>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   gctgcacgagggcatcgacgt 343
             |||||||||||||||||||||
Sbjct: 19346 gctgcacgagggcatcgacgt 19366
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>ref|XM_473963.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 gctgcacgagggcatcgacgt 343
           |||||||||||||||||||||
Sbjct: 867 gctgcacgagggcatcgacgt 887
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    gcgcggcgaggacgccgacgc 168
              |||||||||||||||||||||
Sbjct: 635001 gcgcggcgaggacgccgacgc 634981
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 148     gcgcggcgaggacgccgacgc 168
               |||||||||||||||||||||
Sbjct: 3140293 gcgcggcgaggacgccgacgc 3140313
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>emb|CR383672.6| Zebrafish DNA sequence from clone DKEY-11P10 in linkage group 24,
              complete sequence
          Length = 231583

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     gccaccaccagtaccacctcc 57
              |||||||||||||||||||||
Sbjct: 170239 gccaccaccagtaccacctcc 170259
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>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    ccacggccgtgaccgcgagcg 150
              |||||||||||||||||||||
Sbjct: 343073 ccacggccgtgaccgcgagcg 343093
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 148     gcgcggcgaggacgccgacgc 168
               |||||||||||||||||||||
Sbjct: 2870352 gcgcggcgaggacgccgacgc 2870372
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>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
             complete sequence
          Length = 166951

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   gctgcacgagggcatcgacgt 343
             |||||||||||||||||||||
Sbjct: 25277 gctgcacgagggcatcgacgt 25297
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
              complete sequence
          Length = 187601

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    gctgcacgagggcatcgacgt 343
              |||||||||||||||||||||
Sbjct: 185681 gctgcacgagggcatcgacgt 185701
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>ref|NM_213229.1| Danio rerio nucleoporin like 1 (nupl1), mRNA
          Length = 2111

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 37  gccaccaccagtaccacctcc 57
           |||||||||||||||||||||
Sbjct: 410 gccaccaccagtaccacctcc 430
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>gb|BC098882.1| Danio rerio nucleoporin like 1, mRNA (cDNA clone MGC:113941
           IMAGE:2601167), complete cds
          Length = 2360

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 37  gccaccaccagtaccacctcc 57
           |||||||||||||||||||||
Sbjct: 414 gccaccaccagtaccacctcc 434
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 132     acggccgtgaccgcgagcgcg 152
               |||||||||||||||||||||
Sbjct: 1254793 acggccgtgaccgcgagcgcg 1254813
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     ccgtgaccgcgagcgcggcga 156
               |||||||||||||||||||||
Sbjct: 4850733 ccgtgaccgcgagcgcggcga 4850753
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>gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and
            pglZ) genes, complete cds's
          Length = 9461

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 145  cgagcgcggcgaggacgccgacgct 169
            |||||||||||||||||||| ||||
Sbjct: 5270 cgagcgcggcgaggacgccgccgct 5294
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>ref|XM_523193.1| PREDICTED: Pan troglodytes similar to eukaryotic translation
           initiation factor 3, subunit 1 alpha; merged
           (LOC467798), mRNA
          Length = 780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 gagcgcggcgaggacgccgacgct 169
           |||||||||| |||||||||||||
Sbjct: 162 gagcgcggcgtggacgccgacgct 185
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>ref|XM_471008.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 186 ggccagtccaacatgggcggccgtggcg 213
           |||||||||||||||| |||||| ||||
Sbjct: 163 ggccagtccaacatggccggccgcggcg 190
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>gb|AC144709.2| Danio rerio clone CH211-204P11, complete sequence
          Length = 157229

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    ccaccaccagtaccacctcccagt 61
             |||||||||| |||||||||||||
Sbjct: 48132 ccaccaccagcaccacctcccagt 48109
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>ref|XM_813502.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507681.80) partial mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  gctgggaggaggcccgggag 320
            ||||||||||||||||||||
Sbjct: 1724 gctgggaggaggcccgggag 1743
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>emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in linkage group 1, complete
              sequence
          Length = 230420

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 38     ccaccaccagtaccacctcccagt 61
              |||||||||| |||||||||||||
Sbjct: 194066 ccaccaccagcaccacctcccagt 194043
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>ref|XM_538474.2| PREDICTED: Canis familiaris similar to pleckstrin homology domain
          containing, family H (with MyTH4 domain) member 2
          (LOC481353), mRNA
          Length = 4654

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 6  gccgctcctacctcacctag 25
          ||||||||||||||||||||
Sbjct: 12 gccgctcctacctcacctag 31
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 328     acgagggcatcgacgtcggc 347
               ||||||||||||||||||||
Sbjct: 1428387 acgagggcatcgacgtcggc 1428406
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>gb|AY225409.1| Streptomyces sp. CH7 ABC-type sugar transport system permease
            component (bxl1) gene, partial cds; beta-xylosidase
            (bxl2) gene, complete cds; and oxidoreductase (bxl3)
            gene, partial cds
          Length = 3718

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 322  cgctgcacgagggcatcgacgtcg 345
            ||||||||| ||||||||||||||
Sbjct: 1510 cgctgcacgcgggcatcgacgtcg 1533
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    cgagcgcggcgaggacgccg 164
              ||||||||||||||||||||
Sbjct: 197582 cgagcgcggcgaggacgccg 197601
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>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
              complete sequence
          Length = 143730

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 186    ggccagtccaacatgggcggccgtggcg 213
              |||||||||||||||| |||||| ||||
Sbjct: 131846 ggccagtccaacatggccggccgcggcg 131873
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>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
             complete sequence
          Length = 166475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   cgctccgcctctcgccgtcc 296
             ||||||||||||||||||||
Sbjct: 90009 cgctccgcctctcgccgtcc 89990
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>emb|AL132792.2|DMBR19J1 Drosophila melanogaster BAC clone BACR19J1
          Length = 95463

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ccaccaccagtaccacctcc 57
             ||||||||||||||||||||
Sbjct: 70032 ccaccaccagtaccacctcc 70013
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>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 182490

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ccaccaccagtaccacctcc 57
             ||||||||||||||||||||
Sbjct: 81498 ccaccaccagtaccacctcc 81479
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>ref|NM_130498.1| Drosophila melanogaster CG13362-RA (CG13362), mRNA
          Length = 1688

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  ccaccaccagtaccacctcc 57
           ||||||||||||||||||||
Sbjct: 561 ccaccaccagtaccacctcc 580
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>gb|AY089641.1| Drosophila melanogaster RE65335 full insert cDNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  ccaccaccagtaccacctcc 57
           ||||||||||||||||||||
Sbjct: 561 ccaccaccagtaccacctcc 580
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>ref|XM_691670.1| PREDICTED: Danio rerio similar to CG11210-PA (LOC568345), mRNA
          Length = 2595

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 38   ccaccaccagtaccacctcccagt 61
            |||||||||| |||||||||||||
Sbjct: 2246 ccaccaccagcaccacctcccagt 2269
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>emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 in linkage group 19,
             complete sequence
          Length = 188940

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    ccaccaccagtaccacctcccagt 61
             |||||||||| |||||||||||||
Sbjct: 76521 ccaccaccagcaccacctcccagt 76544
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 268      cgccgcgcacgctccgcctc 287
                ||||||||||||||||||||
Sbjct: 36436115 cgccgcgcacgctccgcctc 36436096
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 125    cgcgtccacggccgtgaccgcgagcgcggcga 156
              |||||||||||||||||   ||||||||||||
Sbjct: 783077 cgcgtccacggccgtgaggtcgagcgcggcga 783046
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     cgctggtgttcatcctggcg 185
               ||||||||||||||||||||
Sbjct: 4340652 cgctggtgttcatcctggcg 4340671
to top
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   cgccgcgcacgctccgcctc 287
             ||||||||||||||||||||
Sbjct: 87954 cgccgcgcacgctccgcctc 87935
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>emb|AL953899.7| Zebrafish DNA sequence from clone CH211-233N24, complete sequence
          Length = 169796

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     ccaccaccagtaccacctcccagt 61
              |||||||||| |||||||||||||
Sbjct: 103841 ccaccaccagcaccacctcccagt 103864
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>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0523F01
          Length = 146419

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    caccaccagtaccacctccc 58
             ||||||||||||||||||||
Sbjct: 53236 caccaccagtaccacctccc 53255
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>dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C21, full
           insert sequence
          Length = 3713

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 cgccgcgcacgctccgcctc 287
           ||||||||||||||||||||
Sbjct: 90  cgccgcgcacgctccgcctc 109
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>emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in linkage group 18,
             complete sequence
          Length = 173372

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   tgccgttcgcgcacgcgctg 392
             ||||||||||||||||||||
Sbjct: 85307 tgccgttcgcgcacgcgctg 85326
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>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete
             sequence
          Length = 121821

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 186   ggccagtccaacatgggcggccgtggcg 213
             |||||||||||||||| |||||| ||||
Sbjct: 76078 ggccagtccaacatggccggccgcggcg 76105
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>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
              sequence
          Length = 315092

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ccaccaccagtaccacctcc 57
              ||||||||||||||||||||
Sbjct: 219503 ccaccaccagtaccacctcc 219484
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>emb|CR812957.13| Zebrafish DNA sequence from clone DKEY-41L5 in linkage group 1, complete
              sequence
          Length = 220462

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     ccaccaccagtaccacctcccagt 61
              |||||||||| |||||||||||||
Sbjct: 110898 ccaccaccagcaccacctcccagt 110921
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>emb|BX927093.8| Zebrafish DNA sequence from clone DKEY-53P2 in linkage group 11,
             complete sequence
          Length = 68923

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   tgccgttcgcgcacgcgctg 392
             ||||||||||||||||||||
Sbjct: 10397 tgccgttcgcgcacgcgctg 10416


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,478,742
Number of Sequences: 3902068
Number of extensions: 2478742
Number of successful extensions: 60256
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57620
Number of HSP's gapped (non-prelim): 2636
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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