ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106217.1| Zea mays PCO093522 mRNA sequence 337 2e-89
2dbj|AK103977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 5e-87
3dbj|AK068862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 5e-87
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
5dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
6dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
7gb|BT018941.1| Zea mays clone Contig87.F mRNA sequence 92 2e-15
8gb|DQ324854.1| Azospirillum brasilense putative anti-sigma E gen... 44 0.40
9gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.6
10emb|BX055800.1|CNS09F7W Single read from an extremity of a full-... 42 1.6
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
13emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.6
14emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
15dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.6
16ref|NM_111903.1| Arabidopsis thaliana ATNAP7 AT3G10670 (ATNAP7) ... 40 6.3
17gb|DQ022656.1| Azospirillum brasilense OxyR (oxyR), AhpC (ahpC),... 40 6.3
18gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 6.3
19ref|XM_751823.1| Ustilago maydis 521 hypothetical protein (UM007... 40 6.3
20ref|XM_382977.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 6.3
21gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC... 40 6.3
22gb|AY035125.1| Arabidopsis thaliana putative ABC transporter ATP... 40 6.3
23gb|AC175207.2| Sporobolomyces roseus clone JGIBAIF-9L20, complet... 40 6.3
24gb|AE005984.1| Caulobacter crescentus CB15 section 310 of 359 of... 40 6.3
25emb|BX822291.1|CNS0A774 Arabidopsis thaliana Full-length cDNA Co... 40 6.3
26emb|BX824893.1|CNS0A6YG Arabidopsis thaliana Full-length cDNA Co... 40 6.3
27emb|BX824371.1|CNS0A6WF Arabidopsis thaliana Full-length cDNA Co... 40 6.3
28emb|BX823288.1|CNS0A6IN Arabidopsis thaliana Full-length cDNA Co... 40 6.3
29gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13... 40 6.3
30gb|AY085010.1| Arabidopsis thaliana clone 124334 mRNA, complete ... 40 6.3
31dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.3
32dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.3
33dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 6.3 
>gb|AY106217.1| Zea mays PCO093522 mRNA sequence
          Length = 679

 Score =  337 bits (170), Expect = 2e-89
 Identities = 313/361 (86%), Gaps = 6/361 (1%)
 Strand = Plus / Plus

                                                                       
Query: 111 gatgaccatcatcatcgaccagactcagttcgatgcggcggcggagaggaaggtcgcc-- 168
           |||||| |||| ||| || ||| | ||| ||||||||| |||||||||||| ||| ||  
Sbjct: 115 gatgacgatcaccattgaacagccccagctcgatgcggtggcggagaggaaagtccccgg 174

                                                                       
Query: 169 ----ggggacccgggggagctcgtgctcgacggcggcttcaccgtgccggattccaacgc 224
               || ||||| | |||||| |||||||||| |||||||  |||||||||  |||||||
Sbjct: 175 cggaggtgaccccgcggagctggtgctcgacgccggcttcgtcgtgccggacgccaacgc 234

                                                                       
Query: 225 cttcggccacaccttcagggactacgacgcggagtcggagcggaagaagacggtggagga 284
           ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 235 cttcggcaataccttcagggactacgacgcggagtcggagcggaagcagacggtagagga 294

                                                                       
Query: 285 gttctaccgcgtgaaccacatcagccagacgtacgagttcgtgcggcggatgcgggacgc 344
           ||||||||| ||||||||| | || |||||| |||||||||||  |||||||||||  | 
Sbjct: 295 gttctaccgggtgaaccacgtgaggcagacgcacgagttcgtggcgcggatgcgggcgga 354

                                                                       
Query: 345 gtacgcgcggctggacaggacggagatgagcatctgggagtgcatcgagctgctcaacga 404
           ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 355 gtacgggcggctggacaagacggagatgggcatctgggagtgcatcgagctgctgaacga 414

                                                                       
Query: 405 gttcatcgacgacagcgaccccgacctcgacatgccgcagatcgagcacctcctccagac 464
           ||||||||||||||||||||| ||||| |||||||| |||||||||||||| || |||||
Sbjct: 415 gttcatcgacgacagcgacccggacctggacatgccccagatcgagcacctgctgcagac 474

            
Query: 465 c 465
           |
Sbjct: 475 c 475
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>dbj|AK103977.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G02, full
           insert sequence
          Length = 1288

 Score =  329 bits (166), Expect = 5e-87
 Identities = 256/286 (89%)
 Strand = Plus / Plus

                                                                       
Query: 180 ggagctcgtgctcgacggcggcttcaccgtgccggattccaacgccttcggccacacctt 239
           |||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||
Sbjct: 266 ggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgcctt 325

                                                                       
Query: 240 cagggactacgacgcggagtcggagcggaagaagacggtggaggagttctaccgcgtgaa 299
           |||| | || || || ||||| ||| ||||| |||||||||||||||||||||| || ||
Sbjct: 326 caggaattatgaggccgagtctgagaggaaggagacggtggaggagttctaccgggtcaa 385

                                                                       
Query: 300 ccacatcagccagacgtacgagttcgtgcggcggatgcgggacgcgtacgcgcggctgga 359
           |||||||| |||||| || || |||||| ||||||||||||| | |||||   || ||||
Sbjct: 386 ccacatcaaccagacatatgatttcgtgaggcggatgcgggaggagtacggtagggtgga 445

                                                                       
Query: 360 caggacggagatgagcatctgggagtgcatcgagctgctcaacgagttcatcgacgacag 419
           || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 caagacggagatggggatctgggagtgcatcgagctgctcaacgagttcatcgacgacag 505

                                                         
Query: 420 cgaccccgacctcgacatgccgcagatcgagcacctcctccagacc 465
           |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cgacccggacctcgacatgccgcagatcgagcacctcctccagacc 551
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>dbj|AK068862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169F14, full
           insert sequence
          Length = 1289

 Score =  329 bits (166), Expect = 5e-87
 Identities = 256/286 (89%)
 Strand = Plus / Plus

                                                                       
Query: 180 ggagctcgtgctcgacggcggcttcaccgtgccggattccaacgccttcggccacacctt 239
           |||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||
Sbjct: 267 ggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgcctt 326

                                                                       
Query: 240 cagggactacgacgcggagtcggagcggaagaagacggtggaggagttctaccgcgtgaa 299
           |||| | || || || ||||| ||| ||||| |||||||||||||||||||||| || ||
Sbjct: 327 caggaattatgaggccgagtctgagaggaaggagacggtggaggagttctaccgggtcaa 386

                                                                       
Query: 300 ccacatcagccagacgtacgagttcgtgcggcggatgcgggacgcgtacgcgcggctgga 359
           |||||||| |||||| || || |||||| ||||||||||||| | |||||   || ||||
Sbjct: 387 ccacatcaaccagacatatgatttcgtgaggcggatgcgggaggagtacggtagggtgga 446

                                                                       
Query: 360 caggacggagatgagcatctgggagtgcatcgagctgctcaacgagttcatcgacgacag 419
           || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 caagacggagatggggatctgggagtgcatcgagctgctcaacgagttcatcgacgacag 506

                                                         
Query: 420 cgaccccgacctcgacatgccgcagatcgagcacctcctccagacc 465
           |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cgacccggacctcgacatgccgcagatcgagcacctcctccagacc 552
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  192 bits (97), Expect = 7e-46
 Identities = 127/137 (92%)
 Strand = Plus / Plus

                                                                            
Query: 329      ggcggatgcgggacgcgtacgcgcggctggacaggacggagatgagcatctgggagtgca 388
                ||||||||||||| | |||||   || |||||| |||||||||| | |||||||||||||
Sbjct: 21132448 ggcggatgcgggaggagtacggtagggtggacaagacggagatggggatctgggagtgca 21132507

                                                                            
Query: 389      tcgagctgctcaacgagttcatcgacgacagcgaccccgacctcgacatgccgcagatcg 448
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 21132508 tcgagctgctcaacgagttcatcgacgacagcgacccggacctcgacatgccgcagatcg 21132567

                                 
Query: 449      agcacctcctccagacc 465
                |||||||||||||||||
Sbjct: 21132568 agcacctcctccagacc 21132584



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                            
Query: 180      ggagctcgtgctcgacggcggcttcaccgtgccggattccaacgccttcggccacacctt 239
                |||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||
Sbjct: 21131065 ggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgcctt 21131124

                    
Query: 240      cagg 243
                ||||
Sbjct: 21131125 cagg 21131128



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 256      gagtcggagcggaagaagacggtggaggagttctaccgcgtgaaccacatcagccagac 314
                ||||| ||| ||||| |||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 21132241 gagtctgagaggaaggagacggtggaggagttctaccgggtcaaccacatcaaccagac 21132299
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>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0456F09
          Length = 141336

 Score =  192 bits (97), Expect = 7e-46
 Identities = 127/137 (92%)
 Strand = Plus / Plus

                                                                         
Query: 329   ggcggatgcgggacgcgtacgcgcggctggacaggacggagatgagcatctgggagtgca 388
             ||||||||||||| | |||||   || |||||| |||||||||| | |||||||||||||
Sbjct: 31109 ggcggatgcgggaggagtacggtagggtggacaagacggagatggggatctgggagtgca 31168

                                                                         
Query: 389   tcgagctgctcaacgagttcatcgacgacagcgaccccgacctcgacatgccgcagatcg 448
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 31169 tcgagctgctcaacgagttcatcgacgacagcgacccggacctcgacatgccgcagatcg 31228

                              
Query: 449   agcacctcctccagacc 465
             |||||||||||||||||
Sbjct: 31229 agcacctcctccagacc 31245



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                         
Query: 180   ggagctcgtgctcgacggcggcttcaccgtgccggattccaacgccttcggccacacctt 239
             |||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||
Sbjct: 29726 ggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgcctt 29785

                 
Query: 240   cagg 243
             ||||
Sbjct: 29786 cagg 29789



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 256   gagtcggagcggaagaagacggtggaggagttctaccgcgtgaaccacatcagccagac 314
             ||||| ||| ||||| |||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 30902 gagtctgagaggaaggagacggtggaggagttctaccgggtcaaccacatcaaccagac 30960
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>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0528E12
          Length = 139750

 Score =  192 bits (97), Expect = 7e-46
 Identities = 127/137 (92%)
 Strand = Plus / Plus

                                                                          
Query: 329    ggcggatgcgggacgcgtacgcgcggctggacaggacggagatgagcatctgggagtgca 388
              ||||||||||||| | |||||   || |||||| |||||||||| | |||||||||||||
Sbjct: 129449 ggcggatgcgggaggagtacggtagggtggacaagacggagatggggatctgggagtgca 129508

                                                                          
Query: 389    tcgagctgctcaacgagttcatcgacgacagcgaccccgacctcgacatgccgcagatcg 448
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 129509 tcgagctgctcaacgagttcatcgacgacagcgacccggacctcgacatgccgcagatcg 129568

                               
Query: 449    agcacctcctccagacc 465
              |||||||||||||||||
Sbjct: 129569 agcacctcctccagacc 129585



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                          
Query: 180    ggagctcgtgctcgacggcggcttcaccgtgccggattccaacgccttcggccacacctt 239
              |||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||
Sbjct: 128066 ggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgcctt 128125

                  
Query: 240    cagg 243
              ||||
Sbjct: 128126 cagg 128129



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                         
Query: 256    gagtcggagcggaagaagacggtggaggagttctaccgcgtgaaccacatcagccagac 314
              ||||| ||| ||||| |||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 129242 gagtctgagaggaaggagacggtggaggagttctaccgggtcaaccacatcaaccagac 129300
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>gb|BT018941.1| Zea mays clone Contig87.F mRNA sequence
          Length = 783

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                       
Query: 400 aacgagttcatcgacgacagcgaccccgacctcgacatgccgcagatcgagcacctcctc 459
           |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| || 
Sbjct: 775 aacgagttcatcgacgacagcgacccggacctggacatgccccagatcgagcacctgctg 716

                 
Query: 460 cagacc 465
           ||||||
Sbjct: 715 cagacc 710
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>gb|DQ324854.1| Azospirillum brasilense putative anti-sigma E gene, complete cds
          Length = 696

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 187 gtgctcgacggcggcttcaccg 208
           ||||||||||||||||||||||
Sbjct: 508 gtgctcgacggcggcttcaccg 529
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 180     ggagctcgtgctcgacggcggcttcaccg 208
               |||||||||| ||||||||||||| ||||
Sbjct: 1658588 ggagctcgtgatcgacggcggctttaccg 1658616
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>emb|BX055800.1|CNS09F7W Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC34CC07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 641

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 117 catcatcatcgaccagactcagttc 141
           ||||||||||||||||| |||||||
Sbjct: 414 catcatcatcgaccagaatcagttc 438
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 55       ctccgccgctctcgctgccgcgaga 79
                |||||||||||| ||||||||||||
Sbjct: 10056850 ctccgccgctcttgctgccgcgaga 10056826
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 55       ctccgccgctctcgctgccgcgaga 79
                |||||||||||| ||||||||||||
Sbjct: 10056735 ctccgccgctcttgctgccgcgaga 10056711
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>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145890

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 55     ctccgccgctctcgctgccgcgaga 79
              |||||||||||| ||||||||||||
Sbjct: 105771 ctccgccgctcttgctgccgcgaga 105795
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>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 132906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 55   ctccgccgctctcgctgccgcgaga 79
            |||||||||||| ||||||||||||
Sbjct: 1224 ctccgccgctcttgctgccgcgaga 1248
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 270     gaagacggtggaggagttcta 290
               |||||||||||||||||||||
Sbjct: 3065647 gaagacggtggaggagttcta 3065627
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>ref|NM_111903.1| Arabidopsis thaliana ATNAP7 AT3G10670 (ATNAP7) mRNA, complete cds
          Length = 1350

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 67  gcggaagaagacggtggagg 48
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>gb|DQ022656.1| Azospirillum brasilense OxyR (oxyR), AhpC (ahpC), and AhpF (ahpF)
            genes, complete cds; and oxidoreductase gene, partial cds
          Length = 4471

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 404  agttcatcgacgacagcgaccccgacct 431
            |||||||||||| ||||||| |||||||
Sbjct: 1444 agttcatcgacgtcagcgacgccgacct 1471
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   ggacgcgtacgcgcggctgg 358
             ||||||||||||||||||||
Sbjct: 33662 ggacgcgtacgcgcggctgg 33681
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>ref|XM_751823.1| Ustilago maydis 521 hypothetical protein (UM00769.1) partial mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgcatcgagctgctcaacga 404
           ||||||||||||||||||||
Sbjct: 307 tgcatcgagctgctcaacga 326
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>ref|XM_382977.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02801.1)
            partial mRNA
          Length = 2130

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  ggcggcggagaggaaggtcg 166
            ||||||||||||||||||||
Sbjct: 1629 ggcggcggagaggaaggtcg 1610
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>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
             complete sequence
          Length = 80379

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   gcggaagaagacggtggagg 283
             ||||||||||||||||||||
Sbjct: 79087 gcggaagaagacggtggagg 79068
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>gb|AY035125.1| Arabidopsis thaliana putative ABC transporter ATPase (At3g10670)
           mRNA, complete cds
          Length = 1368

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 67  gcggaagaagacggtggagg 48
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>gb|AC175207.2| Sporobolomyces roseus clone JGIBAIF-9L20, complete sequence
          Length = 36012

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ggaagaagacggtggaggag 285
             ||||||||||||||||||||
Sbjct: 29296 ggaagaagacggtggaggag 29277
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>gb|AE005984.1| Caulobacter crescentus CB15 section 310 of 359 of the complete genome
          Length = 10212

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  tcgatgcggcggcggagagg 159
            ||||||||||||||||||||
Sbjct: 5804 tcgatgcggcggcggagagg 5785
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>emb|BX822291.1|CNS0A774 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB26ZH03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1277

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 54  gcggaagaagacggtggagg 35
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>emb|BX824893.1|CNS0A6YG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH80ZD10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1303

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 52  gcggaagaagacggtggagg 33
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>emb|BX824371.1|CNS0A6WF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH44ZA08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1276

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 52  gcggaagaagacggtggagg 33
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>emb|BX823288.1|CNS0A6IN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS1ZF02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 53  gcggaagaagacggtggagg 34
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>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete
             sequence
          Length = 118107

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   gcggaagaagacggtggagg 283
             ||||||||||||||||||||
Sbjct: 10036 gcggaagaagacggtggagg 10017
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>gb|AY085010.1| Arabidopsis thaliana clone 124334 mRNA, complete sequence
          Length = 1350

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggaagaagacggtggagg 283
           ||||||||||||||||||||
Sbjct: 67  gcggaagaagacggtggagg 48
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     tcgacggcggcttcaccgtg 210
               ||||||||||||||||||||
Sbjct: 4447233 tcgacggcggcttcaccgtg 4447214
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 190     ctcgacggcggcttcaccgt 209
               ||||||||||||||||||||
Sbjct: 1339723 ctcgacggcggcttcaccgt 1339704
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     agctgctcaacgagttcatc 411
               ||||||||||||||||||||
Sbjct: 1933990 agctgctcaacgagttcatc 1933971


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,655,468
Number of Sequences: 3902068
Number of extensions: 2655468
Number of successful extensions: 60377
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59829
Number of HSP's gapped (non-prelim): 548
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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