Clone Name | bart59a07 |
---|---|
Clone Library Name | barley_pub |
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 936 bits (472), Expect = 0.0 Identities = 484/488 (99%) Strand = Plus / Plus Query: 1 acaaccatcctcattcggaagaacggagagaggtcttctagctacatactgtagccgtcg 60 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 1 acaaccatcctcattcggaaaaacggaaagaggtcttctagctacatactgtagccgtcg 60 Query: 61 atccagcgaaaatgtgtggcatactggcagtgctgggctgcgccgatgacacccagggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atccagcgaaaatgtgtggcatactggcagtgctgggctgcgccgatgacacccagggga 120 Query: 121 agagagtgcgcgtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agagagtgcgcgtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtg 180 Query: 181 gcatgcaccaggtcggtgactgctacctctcccaccagcgcctcgccatcatcgaccctg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatgcaccaggtcggtgactgctacctctcccaccagcgcctcgccatcatcgaccctg 240 Query: 241 cctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtcactgtgaatggag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtcactgtgaatggag 300 Query: 301 agatctacaaccatgaacagctccgggcgcagctctcctcccacacattcaggacaggca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agatctacaaccatgaacagctccgggcgcagctctcctcccacacattcaggacaggca 360 Query: 361 gcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgc 420 Query: 421 tggatggtgtcttctccttcgtcttgctcgacacacgcgaacacagcttcattgctgccc 480 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 421 tggatggtgtcttctccttcgtcttgctcgacacacgcgacaacagcttcattgctgccc 480 Query: 481 gtgatgcc 488 |||||||| Sbjct: 481 gtgatgcc 488
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 751 bits (379), Expect = 0.0 Identities = 443/463 (95%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 26 gagagaggtcttctagctacatactgtagccgtcgatccagcgaaaatgtgtggcatact 85 ||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 11 gagagagatcttctagctacatactgttgccgtcgatccag-gaaaatgtgcggcatact 69 Query: 86 ggcagtgctgggctgcgccgatgacacccaggggaagagagtgcgcgtgctcgagctctc 145 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 ggcggtgctgggctgcgctgatgacacccaggggaagagagtgcgcgtgctcgagctctc 129 Query: 146 gcgcaggctcaagcaccgcggccccgactggagtggcatgcaccaggtcggtgactgcta 205 ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 130 gcgcaggctcaagcaccgcggccccgactggagcggcatgcaccaggttggcgactgcta 189 Query: 206 cctctcccaccagcgcctcgccatcatcgaccctgcctcaggcgaccagccactttacaa 265 |||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 190 cctctcccaccagcgcctcgccattatcgaccctgcctctggcgaccagccgctctacaa 249 Query: 266 cgaggacaagtccatcgtcgtcactgtgaatggagagatctacaaccatgaacagctccg 325 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 250 cgaggacaagtccatcgtcgtcacagtgaatggagagatctacaaccatgaacagctccg 309 Query: 326 ggcgcagctctcctcccacacattcaggacaggcagcgactgcgaggtcatcgcacacct 385 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggcgcagctctcctcccacacgttcaggacaggcagcgactgcgaggtcatcgcacacct 369 Query: 386 gtacgaggagcatggggagaatttcatcgacatgctggatggtgtcttctccttcgtctt 445 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 370 gtacgaggagcatggggagaacttcatcgacatgctggatggtgtcttctccttcgtctt 429 Query: 446 gctcgacacacgcgaacacagcttcattgctgcccgtgatgcc 488 |||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 430 gctcgatacacgcgacaacagcttcattgctgcacgtgatgcc 472
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 704 bits (355), Expect = 0.0 Identities = 416/435 (95%), Gaps = 1/435 (0%) Strand = Plus / Plus Query: 54 gccgtcgatccagcgaaaatgtgtggcatactggcagtgctgggctgcgccgatgacacc 113 ||||||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 5 gccgtcgatccag-gaaaatgtgcggcatactggcggtgctgggctgcgctgatgacacc 63 Query: 114 caggggaagagagtgcgcgtgctcgagctctcgcgcaggctcaagcaccgcggccccgac 173 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64 caagggaagagagtgcgcgtgcttgagctctcgcgcaggctcaagcaccgcggccccgac 123 Query: 174 tggagtggcatgcaccaggtcggtgactgctacctctcccaccagcgcctcgccatcatc 233 ||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 124 tggagcggcatgcaccaggttggcgactgctacctctcccaccagcgcctcgccatcatc 183 Query: 234 gaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtcactgtg 293 ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 184 gaccctgcctctggcgaccagccgctctacaacgaggacaagtccatcgtcgtcacagtg 243 Query: 294 aatggagagatctacaaccatgaacagctccgggcgcagctctcctcccacacattcagg 353 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 244 aatggagagatctacaaccatgaacagctccgggcgcagctctcctcccacacgttcagg 303 Query: 354 acaggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaatttcatc 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 304 acaggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaacttcatc 363 Query: 414 gacatgctggatggtgtcttctccttcgtcttgctcgacacacgcgaacacagcttcatt 473 |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 364 gacatgctggatggtgtcttctccttcgtcttgctcgatacacgcgacaacagcttcatt 423 Query: 474 gctgcccgtgatgcc 488 ||||| ||||||||| Sbjct: 424 gctgcacgtgatgcc 438
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 343 bits (173), Expect = 3e-91 Identities = 356/417 (85%) Strand = Plus / Plus Query: 72 atgtgtggcatactggcagtgctgggctgcgccgatgacacccaggggaagagagtgcgc 131 |||||||||||||||||||||||||| |||| ||| || | ||||||||||| |||| Sbjct: 1 atgtgtggcatactggcagtgctggggtgcggcgacgagtcgcaggggaagagggtgcat 60 Query: 132 gtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtggcatgcaccag 191 |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 61 gtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcaccag 120 Query: 192 gtcggtgactgctacctctcccaccagcgcctcgccatcatcgaccctgcctcaggcgac 251 |||| ||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 121 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 180 Query: 252 cagccactttacaacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaac 311 ||||| || |||||||||||||||||| | | || | || || || |||||||||||| Sbjct: 181 cagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaac 240 Query: 312 catgaacagctccgggcgcagctctcctcccacacattcaggacaggcagcgactgcgag 371 ||||| ||||||||| | ||||||| ||||| ||| |||| ||||| ||||||||| Sbjct: 241 catgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcgag 300 Query: 372 gtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtc 431 |||||||| || ||||| ||||| ||||| || | ||||| |||||| |||||||||| Sbjct: 301 gtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgtt 360 Query: 432 ttctccttcgtcttgctcgacacacgcgaacacagcttcattgctgcccgtgatgcc 488 ||||| ||||| ||||| ||| |||| || ||||||||||||||||| ||||||||| Sbjct: 361 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgcc 417
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 287 bits (145), Expect = 2e-74 Identities = 349/417 (83%) Strand = Plus / Plus Query: 72 atgtgtggcatactggcagtgctgggctgcgccgatgacacccaggggaagagagtgcgc 131 ||||| |||||||| || |||||||| |||| ||| || | ||||||||||| || | | Sbjct: 70 atgtgcggcatactagcggtgctggggtgcggcgacgagtcgcaggggaagagggtccac 129 Query: 132 gtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtggcatgcaccag 191 ||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||||||| Sbjct: 130 gtgctagagctctcgcgcaggctcaagcaccggggcccggactggagcggcctgcaccag 189 Query: 192 gtcggtgactgctacctctcccaccagcgcctcgccatcatcgaccctgcctcaggcgac 251 |||| ||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 190 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 249 Query: 252 cagccactttacaacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaac 311 ||||| || |||||||||||||||||||||| ||| | || || || ||| |||||||| Sbjct: 250 cagccgctctacaacgaggacaagtccatcgccgttgccgtcaacggggaggtctacaac 309 Query: 312 catgaacagctccgggcgcagctctcctcccacacattcaggacaggcagcgactgcgag 371 ||||| |||| ||||| | ||||||| |||| ||| |||| ||||| ||||||||| Sbjct: 310 catgaggagcttcgggcacggctctccggacacaggttccggaccggcagtgactgcgag 369 Query: 372 gtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtc 431 |||||||| || ||||| ||||| | || || | ||||| |||||| |||||||||| Sbjct: 370 gtcatcgcccatctgtatgaggaatacggagaaagcttcattgacatgttggatggtgtt 429 Query: 432 ttctccttcgtcttgctcgacacacgcgaacacagcttcattgctgcccgtgatgcc 488 ||||||||||| || || ||| |||| || |||||||||||||||| ||||||||| Sbjct: 430 ttctccttcgtgttacttgacgcacgagataacagcttcattgctgctcgtgatgcc 486
>gb|AF195231.1|AF195231 Pyrus pyrifolia strain Whangkeumbae asparagine synthetase (AS) mRNA, complete cds Length = 423 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 225 gccatcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtc 284 |||||||| |||||||| || || || ||||| || ||||||||||||||||| || || Sbjct: 39 gccatcattgaccctgcttctggtgatcagcctctctacaacgaggacaagtcaattgtt 98 Query: 285 gtcactgtgaatggagagatctacaaccatgaacagct 322 ||||| |||||||||||||| |||||||||||| |||| Sbjct: 99 gtcacggtgaatggagagatttacaaccatgaagagct 136
>emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase Length = 2085 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 372 gtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtc 431 ||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| || Sbjct: 333 gtcatagctcacctgtacgaggagcatggtgagaattttgtggacatgttggatggaatc 392 Query: 432 ttctccttcgtcttgctcgacaca 455 |||||||| || ||||| |||||| Sbjct: 393 ttctcctttgtgttgctggacaca 416 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 264 aacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaaccatga 316 ||||||||||||||||| || ||||| ||||| |||||||| || |||||||| Sbjct: 225 aacgaggacaagtccattgttgtcacggtgaacggagagatttataaccatga 277
>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase Length = 1978 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 261 tacaacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaaccatgaacag 320 ||||||||||||||||||||||| ||||| || || |||||||| |||||||| ||| || Sbjct: 245 tacaacgaggacaagtccatcgttgtcacggtaaacggagagatttacaaccacgaagag 304 Query: 321 ct 322 || Sbjct: 305 ct 306 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 72 atgtgtggcatactggcagtgctgggctgcgccgatgacacccaggggaagagagtgcgc 131 |||||||| ||||| |||||||| || ||| |||||||| | |||| |||||| || || Sbjct: 56 atgtgtgggatacttgcagtgctcggttgctccgatgactctcaggcgaagagggttcga 115 Query: 132 gtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggag 178 || ||||||||||| |||||| | |||||| | ||||| || ||||| Sbjct: 116 gttctcgagctctctcgcaggttgaagcacaggggcccagattggag 162
>dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthetase, complete cds Length = 2088 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 264 aacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaaccatga 316 ||||||||||||||||| || ||||| |||||||||||||| || |||||||| Sbjct: 245 aacgaggacaagtccattgttgtcacggtgaatggagagatttataaccatga 297 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 372 gtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtc 431 ||||| || |||||||||||||||||||| |||||||| | || ||| ||||||| || Sbjct: 353 gtcattgctcacctgtacgaggagcatggtgagaattttgtggatatgttggatggaatc 412 Query: 432 ttctccttcgtcttgctcgacaca 455 |||||||| || ||||| |||||| Sbjct: 413 ttctcctttgtgttgctagacaca 436
>emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synthetase Length = 3812 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 72 atgtgtggcatactggcagtgctgggctgcgccgatgacacccaggggaagagagtgcgc 131 |||||||| ||||| |||||||| || ||| |||||||| | |||| |||||| || || Sbjct: 1 atgtgtgggatacttgcagtgctcggttgctccgatgactctcaggcgaagagggttcga 60 Query: 132 gtgctcgagctctcgcgcaggc 153 || ||||||||||| ||||||| Sbjct: 61 gttctcgagctctctcgcaggc 82 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 261 tacaacgaggacaagtccatcgtcgtcac 289 ||||||||||||||||||||||| ||||| Sbjct: 1177 tacaacgaggacaagtccatcgttgtcac 1205
>ref|NM_180941.1| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.1 mRNA, complete cds Length = 2068 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 225 gccatcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtc 284 |||||||| |||||| | ||||| ||||| || || || ||||| |||||| || ||| Sbjct: 188 gccatcattgaccctacttcaggagaccaacctctctataacgaagacaagaccgtcgct 247 Query: 285 gtcactgtgaatggagagatctacaacca 313 |||||||| ||||||||||| |||||||| Sbjct: 248 gtcactgtaaatggagagatatacaacca 276
>ref|NM_125900.2| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.2 mRNA, complete cds Length = 2071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 225 gccatcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtc 284 |||||||| |||||| | ||||| ||||| || || || ||||| |||||| || ||| Sbjct: 188 gccatcattgaccctacttcaggagaccaacctctctataacgaagacaagaccgtcgct 247 Query: 285 gtcactgtgaatggagagatctacaacca 313 |||||||| ||||||||||| |||||||| Sbjct: 248 gtcactgtaaatggagagatatacaacca 276
>gb|AY124866.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 1737 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 225 gccatcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtc 284 |||||||| |||||| | ||||| ||||| || || || ||||| |||||| || ||| Sbjct: 154 gccatcattgaccctacttcaggagaccaacctctctataacgaagacaagaccgtcgct 213 Query: 285 gtcactgtgaatggagagatctacaacca 313 |||||||| ||||||||||| |||||||| Sbjct: 214 gtcactgtaaatggagagatatacaacca 242
>gb|AF488726.1| Securigera parviflora asparagine synthetase (As2) mRNA, partial cds Length = 1367 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 351 aggacaggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaatttc 410 |||||||| || ||||| || || || ||||||||||| ||||||||||| || || ||| Sbjct: 280 aggacaggaagtgactgtgatgttattgcacacctgtatgaggagcatggagaaaacttc 339 Query: 411 atcgacatgctggatgg 427 |||||||| ||||||| Sbjct: 340 gtcgacatgttggatgg 356
>gb|AF367340.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 2028 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 225 gccatcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtc 284 |||||||| |||||| | ||||| ||||| || || || ||||| |||||| || ||| Sbjct: 187 gccatcattgaccctacttcaggagaccaacctctctataacgaagacaagaccgtcgct 246 Query: 285 gtcactgtgaatggagagatctacaacca 313 |||||||| ||||||||||| |||||||| Sbjct: 247 gtcactgtaaatggagagatatacaacca 275
>gb|AF095453.1|AF095453 Arabidopsis thaliana asparagine synthetase (ASN2) mRNA, complete cds Length = 1960 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 225 gccatcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtc 284 |||||||| |||||| | ||||| ||||| || || || ||||| |||||| || ||| Sbjct: 154 gccatcattgaccctacttcaggagaccaacctctctataacgaagacaagaccgtcgct 213 Query: 285 gtcactgtgaatggagagatctacaacca 313 |||||||| ||||||||||| |||||||| Sbjct: 214 gtcactgtaaatggagagatatacaacca 242
>ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.1 mRNA, complete cds Length = 2206 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 357 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 416 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 417 cggtgaacggagagatttataaccatga 444
>ref|NM_180332.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.2 mRNA, complete cds Length = 2299 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 357 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 416 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 417 cggtgaacggagagatttataaccatga 444
>ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.3 mRNA, complete cds Length = 2380 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 357 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 416 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 417 cggtgaacggagagatttataaccatga 444
>gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 1786 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 158 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 217 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 218 cggtgaacggagagatttataaccatga 245
>gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 2183 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 359 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 418 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 419 cggtgaacggagagatttataaccatga 446
>gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 mRNA, complete cds Length = 2123 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 354 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 413 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 414 cggtgaacggagagatttataaccatga 441
>emb|BX824817.1|CNS0A4VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2052 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 336 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 395 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 396 cggtgaacggagagatttataaccatga 423
>gb|U89923.1|MSU89923 Medicago sativa asparagine synthetase mRNA, complete cds Length = 2184 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 378 gcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtctt 433 |||||||||||||||||| |||| || ||||| | ||||||||||||||| |||| Sbjct: 490 gcacacctgtacgaggagtatggagaaaattttgtggacatgctggatggtatctt 545 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 285 gtcactgtgaatggagagatctacaaccatgaa 317 ||||| |||||||||||||||||||| |||||| Sbjct: 397 gtcacggtgaatggagagatctacaatcatgaa 429
>gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) glutamine-dependent asparagine synthetase mRNA, complete cds Length = 1755 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 229 tcatcgaccctgcctcaggcgaccagccactttacaacgaggacaagtccatcgtcgtca 288 ||||||| ||||| || || || || || |||| ||||||||||||| |||| || |||| Sbjct: 158 tcatcgatcctgcttccggtgatcaacctcttttcaacgaggacaagaccattgttgtca 217 Query: 289 ctgtgaatggagagatctacaaccatga 316 | ||||| |||||||| || |||||||| Sbjct: 218 cggtgaacggagagatttataaccatga 245
>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II Length = 2044 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 263 caacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaaccatgaa 317 |||||||||||| ||| || | ||||| || ||||||||||| |||||||||||| Sbjct: 211 caacgaggacaaatccgtcattgtcacggtaaatggagagatttacaaccatgaa 265
>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds Length = 2109 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 285 gtcactgtgaatggagagatctacaaccatgaacagctc 323 ||||| |||||||||||||| |||||||||||| ||||| Sbjct: 361 gtcacggtgaatggagagatttacaaccatgaagagctc 399
>gb|AF014055.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 2052 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 94 tgggctgcgccgatgacacccaggggaagagagtgcgcgtgctcgagctctcgcgcaggc 153 |||| ||| |||||||| | |||| ||| || || ||||| || |||||||| ||||| Sbjct: 23 tgggttgctccgatgactctcaggcgaaaagggttcgcgttcttgagctctctcgcagat 82 Query: 154 tcaagcaccgcggccccgactggagtggcat 184 | |||||||| || ||||||||||||||||| Sbjct: 83 tgaagcaccgtgggcccgactggagtggcat 113
>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2) Length = 2187 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 363 gactgcgaggtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgctg 422 ||||| || ||||| ||||||||||| ||||||||||| || || || | ||||||||| Sbjct: 436 gactgtgatgtcattgcacacctgtatgaggagcatggagaaaactttgtggacatgctg 495 Query: 423 gatggt 428 |||||| Sbjct: 496 gatggt 501
>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1) Length = 2053 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 283 tcgtcactgtgaatggagagatctacaaccatgaacagctc 323 ||||||| || ||||||||||| |||||||||||| ||||| Sbjct: 310 tcgtcacggtaaatggagagatttacaaccatgaagagctc 350 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 378 gcacacctgtacgaggagcatggggagaatttcatcgacatgctggatgg 427 ||||||||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 405 gcacacctgtatgaggaacatggagaaaactttatggacatgctggatgg 454
>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds Length = 2143 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 129 cgcgtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtgg 181 |||||||| |||||||| ||||| | |||||||| ||||| ||||||||||| Sbjct: 212 cgcgtgcttgagctctctcgcagattgaagcaccgtggccctgactggagtgg 264 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 264 aacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaaccatgaacagctc 323 ||||||||||| ||| || | || || || ||||||||||| |||||||||||| ||||| Sbjct: 347 aacgaggacaaatccgtcattgttacggtaaatggagagatttacaaccatgaagagctc 406 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 378 gcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtcttctc 436 ||||||||||||||||| ||||| || | || | ||||||||||||||| ||||||| Sbjct: 461 gcacacctgtacgaggaacatggagaagactttgtggacatgctggatggtatcttctc 519
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 342 cacacattcaggacaggcagcgactgcgaggtcatc 377 ||||| ||||| || ||||||||||||||||||||| Sbjct: 10095372 cacacgttcagcaccggcagcgactgcgaggtcatc 10095337
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 342 cacacattcaggacaggcagcgactgcgaggtcatc 377 ||||| ||||| || ||||||||||||||||||||| Sbjct: 40993 cacacgttcagcaccggcagcgactgcgaggtcatc 40958
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 342 cacacattcaggacaggcagcgactgcgaggtcatc 377 ||||| ||||| || ||||||||||||||||||||| Sbjct: 10093493 cacacgttcagcaccggcagcgactgcgaggtcatc 10093458
>gb|DQ227307.1| Glycine max asparagine synthetase mRNA, complete cds Length = 1752 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 |||||||||||||||||||| |||||| Sbjct: 227 gtgaatggagagatctacaatcatgaa 253
>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase Length = 2154 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 285 gtcactgtgaatggagagatctacaaccatgaacagctc 323 ||||| ||||||||||| |||||||| |||||| ||||| Sbjct: 331 gtcacggtgaatggagaaatctacaatcatgaagagctc 369
>emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (EC 6.3.5.4) Length = 2200 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 285 gtcactgtgaatggagagatctacaaccatgaacagctc 323 ||||| ||||||||||| |||||||| |||||| ||||| Sbjct: 307 gtcacggtgaatggagaaatctacaatcatgaagagctc 345 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gcacacctgtacgaggagcatggggagaattt 409 ||||||||||||||||| ||||| || ||||| Sbjct: 400 gcacacctgtacgaggaacatggagaaaattt 431
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 291 gtgaatggagagatctacaaccatgaa 317 ||||||||||||||||| ||||||||| Sbjct: 8774687 gtgaatggagagatctataaccatgaa 8774661
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 291 gtgaatggagagatctacaaccatgaa 317 ||||||||||||||||| ||||||||| Sbjct: 45008 gtgaatggagagatctataaccatgaa 44982
>dbj|AK101821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G13, full insert sequence Length = 2879 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 ||||||||||||||||| ||||||||| Sbjct: 366 gtgaatggagagatctataaccatgaa 392
>dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058E10, full insert sequence Length = 2265 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 ||||||||||||||||| ||||||||| Sbjct: 342 gtgaatggagagatctataaccatgaa 368
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 357 ggcagcgactgcgaggtcatcgcacacctgtacgaggag 395 ||||||||| |||| ||||||| ||||||||||||||| Sbjct: 4281139 ggcagcgacggcgaagtcatcgtccacctgtacgaggag 4281101
>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds Length = 2108 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 |||||||||||||||||||| |||||| Sbjct: 370 gtgaatggagagatctacaatcatgaa 396
>gb|U55874.1|GMU55874 Glycine max asparagine synthetase mRNA, complete cds Length = 2211 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 |||||||||||||||||||| |||||| Sbjct: 393 gtgaatggagagatctacaatcatgaa 419
>gb|L40327.1|ALFASPSYN Medicago sativa asparagine synthetase gene, exons 1-13 and complete cds Length = 7969 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 |||||||||||||||||||| |||||| Sbjct: 4096 gtgaatggagagatctacaatcatgaa 4122 Score = 40.1 bits (20), Expect = 6.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 386 gtacgaggagcatggggagaatttcatcgacatgctggatggtgtctt 433 |||||||||| |||| || ||||| | ||||||||||||||| |||| Sbjct: 4304 gtacgaggagtatggagaaaattttgtggacatgctggatggtatctt 4351
>gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, complete cds Length = 2172 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 ||||||||||||||||| ||||||||| Sbjct: 353 gtgaatggagagatctataaccatgaa 379
>dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA for asparagine synthetase, complete cds Length = 2141 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaa 317 ||||||||||||||||| ||||||||| Sbjct: 353 gtgaatggagagatctataaccatgaa 379
>gb|AC151412.2| Mus musculus BAC clone RP23-229E19 from 7, complete sequence Length = 228343 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 335 ctcctcccacacattcaggaca 356 |||||||||||||||||||||| Sbjct: 147531 ctcctcccacacattcaggaca 147552
>gb|AF014057.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 1906 Score = 44.1 bits (22), Expect = 0.42 Identities = 67/82 (81%) Strand = Plus / Plus Query: 103 ccgatgacacccaggggaagagagtgcgcgtgctcgagctctcgcgcaggctcaagcacc 162 |||||||| | |||| ||| || || ||||| || |||||||| ||||| | ||||| | Sbjct: 32 ccgatgactctcaggcgaaaagggttcgcgttcttgagctctctcgcagattgaagcatc 91 Query: 163 gcggccccgactggagtggcat 184 | || ||||||||||||||||| Sbjct: 92 gtgggcccgactggagtggcat 113
>gb|AF014056.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 2055 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 135 ctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtggcat 184 ||||||||||| ||||| | ||||| || || ||||||||||||||||| Sbjct: 64 ctcgagctctctcgcagattgaagcatcgtgggcccgactggagtggcat 113
>gb|BT013473.1| Lycopersicon esculentum clone 132134R, mRNA sequence Length = 1923 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 aatggagagatctacaaccat 314 ||||||||||||||||||||| Sbjct: 289 aatggagagatctacaaccat 309
>emb|Y13321.1|PSASPSYN1 Pisum sativum gene encoding asparagine synthetase 1, promoter sequence and exon 1-3 Length = 3258 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 291 gtgaatggagagatctacaaccatgaacagctc 323 ||||||||||| |||||||| |||||| ||||| Sbjct: 3226 gtgaatggagaaatctacaatcatgaagagctc 3258
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 ctggatggtgtcttctccttc 440 ||||||||||||||||||||| Sbjct: 4946787 ctggatggtgtcttctccttc 4946767
>gb|AC084653.1|CBRG45O14 Caenorhabditis briggsae cosmid G45O14, complete sequence Length = 43983 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 aatggagagatctacaaccat 314 ||||||||||||||||||||| Sbjct: 25500 aatggagagatctacaaccat 25480
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 ccatgaacagctccgggcgca 331 ||||||||||||||||||||| Sbjct: 4799484 ccatgaacagctccgggcgca 4799504
>gb|AY103777.1| Zea mays PCO113531 mRNA sequence Length = 2209 Score = 42.1 bits (21), Expect = 1.7 Identities = 63/77 (81%) Strand = Plus / Plus Query: 348 ttcaggacaggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaat 407 ||||| || ||||| ||||||||||||||| | |||||||||| || | || ||||| Sbjct: 371 ttcagcacgggcagtgactgcgaggtcatcatgcccctgtacgagaagtacggcgagaac 430 Query: 408 ttcatcgacatgctgga 424 ||| | ||||||||||| Sbjct: 431 ttcgtggacatgctgga 447 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 aatggagagatctacaacca 313 |||||||||||||||||||| Sbjct: 314 aatggagagatctacaacca 333
>dbj|AB035248.1| Astragalus sinicus AsAS2 mRNA for asparagine synthetase, complete cds Length = 2133 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 285 gtcactgtgaatggagagatctacaaccatgaa 317 ||||| |||||||| ||||||||||| |||||| Sbjct: 300 gtcacggtgaatggtgagatctacaatcatgaa 332
>gb|BT025405.1| Bos taurus SH2 domain containing 3A (SH2D3A), NotI truncated, mRNA, incomplete 3' cds Length = 1646 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctggcagtgctgggctgcgc 103 |||||||||||||||||||| Sbjct: 1609 ctggcagtgctgggctgcgc 1628
>ref|XM_587285.2| PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript variant 1 (LOC510173), mRNA Length = 2359 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctggcagtgctgggctgcgc 103 |||||||||||||||||||| Sbjct: 1356 ctggcagtgctgggctgcgc 1375
>ref|XM_882760.1| PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript variant 2 (LOC510173), mRNA Length = 2267 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctggcagtgctgggctgcgc 103 |||||||||||||||||||| Sbjct: 1264 ctggcagtgctgggctgcgc 1283
>gb|AY458641.2| Uncultured bacterium 463 clone EBAC080-L32B05 genomic sequence Length = 111495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gacaggcagcgactgcgagg 372 |||||||||||||||||||| Sbjct: 42434 gacaggcagcgactgcgagg 42415
>emb|X72379.1|OAKRT213 O.aries gene for intermediate filament type II keratin Length = 9539 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cctcccacacattcaggaca 356 |||||||||||||||||||| Sbjct: 5909 cctcccacacattcaggaca 5890
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tgtgtggcatactggcagtg 92 |||||||||||||||||||| Sbjct: 86628 tgtgtggcatactggcagtg 86609
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tgtgtggcatactggcagtg 92 |||||||||||||||||||| Sbjct: 26549742 tgtgtggcatactggcagtg 26549723
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 catggggagaatttcatcgacatg 419 |||||||||||| ||||||||||| Sbjct: 24369554 catggggagaatatcatcgacatg 24369531
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 catggggagaatttcatcgacatg 419 |||||||||||| ||||||||||| Sbjct: 115458 catggggagaatatcatcgacatg 115435
>ref|XM_562344.1| Anopheles gambiae str. PEST ENSANGP00000017276 (ENSANGG00000022650), partial mRNA Length = 1215 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 catactgtagccgtcgatccagcg 68 |||||||| ||||||||||||||| Sbjct: 1044 catactgttgccgtcgatccagcg 1021
>ref|XM_557504.1| Anopheles gambiae str. PEST ENSANGP00000001468 (ENSANGG00000001248), partial mRNA Length = 1926 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 catactgtagccgtcgatccagcg 68 |||||||| ||||||||||||||| Sbjct: 1755 catactgttgccgtcgatccagcg 1732
>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full insert sequence Length = 2454 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tgtgtggcatactggcagtg 92 |||||||||||||||||||| Sbjct: 54 tgtgtggcatactggcagtg 35
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 aatggagagatctacaaccatgaa 317 ||||||||||| |||||||||||| Sbjct: 4554 aatggagagatttacaaccatgaa 4577 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,538,729 Number of Sequences: 3902068 Number of extensions: 3538729 Number of successful extensions: 57694 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57310 Number of HSP's gapped (non-prelim): 381 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)