ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart59a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476017.1| Oryza sativa (japonica cultivar-group), predic... 84 4e-13
2gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
4emb|CR938707.1| Single read from an extremity of a full-length c... 46 0.091
5gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.36
6gb|AE005957.1| Caulobacter crescentus CB15 section 283 of 359 of... 44 0.36
7gb|AE012308.1| Xanthomonas campestris pv. campestris str. ATCC 3... 44 0.36
8gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 44 0.36
9gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosom... 42 1.4
10gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 1.4
11gb|U23139.1| Caenorhabditis elegans cosmid F13H8, complete sequence 42 1.4
12gb|AC121954.2| Mus musculus BAC clone RP24-218I17 from 6, comple... 42 1.4
13emb|AL022328.21|HS402G11 Human DNA sequence from clone RP3-402G1... 42 1.4
14gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.4
15emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 42 1.4
16dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynth... 42 1.4
17dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.4
18ref|NM_062850.2| Caenorhabditis elegans F13H8.5 (F13H8.5) mRNA, ... 42 1.4
19gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.4
20ref|XM_508964.1| PREDICTED: Pan troglodytes similar to COP9 comp... 40 5.6
21ref|NM_191913.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
22gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, co... 40 5.6
23gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
24gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.6
25ref|NM_016319.1| Homo sapiens COP9 constitutive photomorphogenic... 40 5.6
26gb|BC011789.2| Homo sapiens COP9 constitutive photomorphogenic h... 40 5.6
27emb|AL672043.15| Human DNA sequence from clone RP11-322N21 on ch... 40 5.6
28gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, com... 40 5.6
29emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segmen... 40 5.6
30gb|BC093015.1| Homo sapiens COP9 constitutive photomorphogenic h... 40 5.6
31emb|CR859228.1| Pongo pygmaeus mRNA; cDNA DKFZp459L118 (from clo... 40 5.6
32emb|CR860256.1| Pongo pygmaeus mRNA; cDNA DKFZp468G2128 (from cl... 40 5.6
33gb|BC108128.1| Bos taurus cDNA clone IMAGE:7989656 40 5.6
34gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 5.6
35emb|CR605258.1| full-length cDNA clone CS0DL004YB13 of B cells (... 40 5.6
36emb|CR623628.1| full-length cDNA clone CS0DC001YO04 of Neuroblas... 40 5.6
37emb|CR622122.1| full-length cDNA clone CS0DI057YB15 of Placenta ... 40 5.6
38emb|CR621364.1| full-length cDNA clone CS0DI031YM03 of Placenta ... 40 5.6
39emb|CR620296.1| full-length cDNA clone CS0DI078YI08 of Placenta ... 40 5.6
40emb|CR620180.1| full-length cDNA clone CS0DI055YM09 of Placenta ... 40 5.6
41emb|CR619642.1| full-length cDNA clone CS0DA003YN12 of Neuroblas... 40 5.6
42emb|CR613057.1| full-length cDNA clone CS0DB004YN01 of Neuroblas... 40 5.6
43emb|CR605450.1| full-length cDNA clone CS0DI065YC02 of Placenta ... 40 5.6
44emb|CR605577.1| full-length cDNA clone CS0DA002YH18 of Neuroblas... 40 5.6
45emb|CR603520.1| full-length cDNA clone CS0DK008YP13 of HeLa cell... 40 5.6
46emb|CR599521.1| full-length cDNA clone CS0DE008YL16 of Placenta ... 40 5.6
47emb|CR596731.1| full-length cDNA clone CS0DF004YH16 of Fetal bra... 40 5.6
48emb|CR594015.1| full-length cDNA clone CS0DD001YP20 of Neuroblas... 40 5.6
49emb|CR592980.1| full-length cDNA clone CS0DI073YP06 of Placenta ... 40 5.6
50emb|CR592602.1| full-length cDNA clone CS0DF037YF09 of Fetal bra... 40 5.6
51emb|CR591390.1| full-length cDNA clone CS0DI031YB16 of Placenta ... 40 5.6
52dbj|AK001318.1| Homo sapiens cDNA FLJ10456 fis, clone NT2RP1001395 40 5.6
53dbj|AK022488.1| Homo sapiens cDNA FLJ12426 fis, clone MAMMA10031... 40 5.6
54dbj|AK021721.1| Homo sapiens cDNA FLJ11659 fis, clone HEMBA10046... 40 5.6
55dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
56dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
57gb|AC125494.2| Homo sapiens 12 PAC RP4-761J14 (Roswell Park Canc... 40 5.6
58ref|NM_174357.2| Bos taurus interleukin 1 receptor antagonist (I... 40 5.6
59gb|BC007843.1| Homo sapiens, clone IMAGE:4128465, mRNA 40 5.6
60dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
61dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.6
62gb|AF210052.1|AF210052 Homo sapiens COP9 complex subunit 7a mRNA... 40 5.6
63gb|AF193844.1|AF193844 Homo sapiens COP9 complex subunit 7a mRNA... 40 5.6
64gb|AF144047.1|AF144047 Streptomyces cinnamonensis macrolide type... 40 5.6
65dbj|AB006206.3| Streptomyces griseus AmfR, AmfA, AmfB, AmfS and ... 40 5.6
66gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
67emb|AJ243267.1|HSA243267 Homo sapiens GGT gene for gamma-glutamy... 40 5.6
68dbj|AP000356.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 5.6
69dbj|AB033603.1| Homo sapiens COPS7a mRNA for cop9 complex subuni... 40 5.6
70dbj|AB005148.1| Bos taurus mRNA for IL-1 receptor antagonist, co... 40 5.6
71dbj|AB014764.1| Homo sapiens mRNA for DERP10 (dermal papilla der... 40 5.6 
>ref|XM_476017.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 304 tccacaaggtcttccagctgccctccgccgccagcctcgacgacatcgccggccgcttcg 363
           ||||||||||||||||||||||||||  ||| | | ||||||||||| ||||||||||||
Sbjct: 242 tccacaaggtcttccagctgccctccaacgctaacatcgacgacatcaccggccgcttcg 301

                                             
Query: 364 aggccggtgtgctcacgctcaccatgcccaagcg 397
           ||||| | || |||||  ||||| | ||||||||
Sbjct: 302 aggccagcgtcctcaccatcaccgtccccaagcg 335
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                         
Query: 304   tccacaaggtcttccagctgccctccgccgccagcctcgacgacatcgccggccgcttcg 363
             ||||||||||||||||||||||||||  ||| | | ||||||||||| ||||||||||||
Sbjct: 53333 tccacaaggtcttccagctgccctccaacgctaacatcgacgacatcaccggccgcttcg 53392

                                               
Query: 364   aggccggtgtgctcacgctcaccatgcccaagcg 397
             ||||| | || |||||  ||||| | ||||||||
Sbjct: 53393 aggccagcgtcctcaccatcaccgtccccaagcg 53426
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                            
Query: 304      tccacaaggtcttccagctgccctccgccgccagcctcgacgacatcgccggccgcttcg 363
                ||||||||||||||||||||||||||  ||| | | ||||||||||| ||||||||||||
Sbjct: 29274676 tccacaaggtcttccagctgccctccaacgctaacatcgacgacatcaccggccgcttcg 29274735

                                                  
Query: 364      aggccggtgtgctcacgctcaccatgcccaagcg 397
                ||||| | || |||||  ||||| | ||||||||
Sbjct: 29274736 aggccagcgtcctcaccatcaccgtccccaagcg 29274769
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>emb|CR938707.1| Single read from an extremity of a full-length cDNA clone made from
           Aedes aegypti total adult females. 5-prime end of clone
           KW0AAA1YA03AAM1 from strain Liverpool of Aedes aegypti
           (yellow fever mosquito)
          Length = 388

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 87  atggcggctgccaccggaaccaa 109
           |||||||||||||||||||||||
Sbjct: 304 atggcggctgccaccggaaccaa 282
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 104    aaccaagaaggagcagcagcat 125
              ||||||||||||||||||||||
Sbjct: 503166 aaccaagaaggagcagcagcat 503145
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>gb|AE005957.1| Caulobacter crescentus CB15 section 283 of 359 of the complete genome
          Length = 10364

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 236  cgacttccgggtgcaggtcgacggcg 261
            |||| |||||||||||||||||||||
Sbjct: 7628 cgacatccgggtgcaggtcgacggcg 7653
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>gb|AE012308.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 216
            of 460 of the complete genome
          Length = 11019

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 256  acggcgccggcaggctcaccctgcgcggca 285
            ||||||||||||| ||||||||| ||||||
Sbjct: 1601 acggcgccggcagactcaccctgagcggca 1572
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 256     acggcgccggcaggctcaccctgcgcggca 285
               ||||||||||||| ||||||||| ||||||
Sbjct: 2591308 acggcgccggcagactcaccctgagcggca 2591337
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>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence
          Length = 215980

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    aaggagcagcagcatccacac 131
              |||||||||||||||||||||
Sbjct: 143680 aaggagcagcagcatccacac 143700
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 339   ctcgacgacatcgccggccgc 359
             |||||||||||||||||||||
Sbjct: 34040 ctcgacgacatcgccggccgc 34060
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>gb|U23139.1| Caenorhabditis elegans cosmid F13H8, complete sequence
          Length = 37794

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 117  cagcagcatccacacccagctccaccacc 145
            |||||||| ||||| ||||||||||||||
Sbjct: 2365 cagcagcaaccacaaccagctccaccacc 2337
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>gb|AC121954.2| Mus musculus BAC clone RP24-218I17 from 6, complete sequence
          Length = 182855

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    agcagcagcatccacacccag 135
              |||||||||||||||||||||
Sbjct: 107548 agcagcagcatccacacccag 107568
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>emb|AL022328.21|HS402G11 Human DNA sequence from clone RP3-402G11 on chromosome 22q13.31-13.33
              Contains the MAPK12 gene for mitogen activated protein
              kinase 12 (SAPK3), the MAPK11 gene for mitogen activated
              protein kinase 11 (PRKM11), gene KIAA0315, the gene for a
              novel protein similar to KIAA0901 and mouse histone
              deacetylase MHDA2, the gene for a novel protein similar to
              Xenopus gamma-tubulin interacting protein (yeast SPC98
              homolog), the gene for a novel protein similar to yeast and
              bacterial predicted proteins, the gene for a novel protein
              similar to C. elegans F38A5.2, the gene for a novel protein
              similar to MRS1 and the gene for a novel protein similar to
              mouse MOV10 (GB110) and yeast and plant predicted proteins.
              Contains ESTs, GSSs and fifteen putative CpG islands,
              complete sequence
          Length = 177241

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 117    cagcagcatccacacccagctccac 141
              ||||||||||||||||||| |||||
Sbjct: 135062 cagcagcatccacacccaggtccac 135086



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 117    cagcagcatccacacccagctccac 141
              ||||||||||||||||||| |||||
Sbjct: 134667 cagcagcatccacacccagttccac 134691



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 117    cagcagcatccacacccagctccac 141
              ||||||||||||||||||| |||||
Sbjct: 134511 cagcagcatccacacccaggtccac 134535



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    gcagcatccacacccagctccacc 142
              ||||||||||||||||| ||||||
Sbjct: 135115 gcagcatccacacccaggtccacc 135138
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 204    ctccgcctcaccctccagggc 224
              |||||||||||||||||||||
Sbjct: 168352 ctccgcctcaccctccagggc 168332
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 263    cggcaggctcaccctgcgcggcagcaggc 291
              |||| |||||||||||| |||||||||||
Sbjct: 183123 cggccggctcaccctgctcggcagcaggc 183095
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>dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynthetic gene cluster,
             complete cds
          Length = 27448

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 314   cttccagctgccctccgccgccagc 338
             |||||||||||||||| ||||||||
Sbjct: 15656 cttccagctgccctccaccgccagc 15632
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 257     cggcgccggcaggctcaccctgcgcggca 285
               ||||||||||| |||||||||| ||||||
Sbjct: 2499964 cggcgccggcaagctcaccctgagcggca 2499992
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>ref|NM_062850.2| Caenorhabditis elegans F13H8.5 (F13H8.5) mRNA, complete cds
          Length = 1808

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 117 cagcagcatccacacccagctccaccacc 145
           |||||||| ||||| ||||||||||||||
Sbjct: 378 cagcagcaaccacaaccagctccaccacc 406
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 257     cggcgccggcaggctcaccctgcgcggca 285
               ||||||||||| |||||||||| ||||||
Sbjct: 2520274 cggcgccggcaagctcaccctgagcggca 2520302
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>ref|XM_508964.1| PREDICTED: Pan troglodytes similar to COP9 complex subunit 7a; COP9
           (constitutive photomorphogenic, Arabidopsis, homolog)
           subunit 7A (LOC451792), mRNA
          Length = 1408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 921 cacaaggtcttccagctgcc 902
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>ref|NM_191913.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ccgccgccagcctcgacgac 347
           ||||||||||||||||||||
Sbjct: 862 ccgccgccagcctcgacgac 843
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>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     cctcctcatggcggctgcca 99
              ||||||||||||||||||||
Sbjct: 134291 cctcctcatggcggctgcca 134310
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>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032N11
              map near 50283S, complete sequence
          Length = 139217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    gcccggcgcctccctccaca 309
              ||||||||||||||||||||
Sbjct: 101330 gcccggcgcctccctccaca 101311
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ccagcctcgacgacatcgcc 353
              ||||||||||||||||||||
Sbjct: 596336 ccagcctcgacgacatcgcc 596355
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>ref|NM_016319.1| Homo sapiens COP9 constitutive photomorphogenic homolog subunit 7A
           (Arabidopsis) (COPS7A), mRNA
          Length = 1868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 537 cacaaggtcttccagctgcc 518
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>gb|BC011789.2| Homo sapiens COP9 constitutive photomorphogenic homolog subunit 7A
           (Arabidopsis), mRNA (cDNA clone MGC:19475
           IMAGE:4025790), complete cds
          Length = 1763

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 496 cacaaggtcttccagctgcc 477
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>emb|AL672043.15| Human DNA sequence from clone RP11-322N21 on chromosome 1 Contains a
             novel gene, the gene for  tetraspan 1 (TSPAN-1), gene
             FLJ20277 (FLJ31624) and the gene for a novel protein
             (FLJ25163), complete sequence
          Length = 87234

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    cacacagaaccacggctgtcccca 50
             ||||||||||||| ||||||||||
Sbjct: 24202 cacacagaaccactgctgtcccca 24179
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>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence
          Length = 202205

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     cctcctcatggcggctgcca 99
              ||||||||||||||||||||
Sbjct: 180064 cctcctcatggcggctgcca 180045
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>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7
          Length = 349652

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    cgccagcctcgacgacatcg 351
              ||||||||||||||||||||
Sbjct: 244619 cgccagcctcgacgacatcg 244638
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>gb|BC093015.1| Homo sapiens COP9 constitutive photomorphogenic homolog subunit 7A
           (Arabidopsis), mRNA (cDNA clone MGC:110877
           IMAGE:30344094), complete cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 547 cacaaggtcttccagctgcc 528
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>emb|CR859228.1| Pongo pygmaeus mRNA; cDNA DKFZp459L118 (from clone DKFZp459L118)
          Length = 1807

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 542 cacaaggtcttccagctgcc 523
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>emb|CR860256.1| Pongo pygmaeus mRNA; cDNA DKFZp468G2128 (from clone DKFZp468G2128)
          Length = 2067

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 785 cacaaggtcttccagctgcc 766
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>gb|BC108128.1| Bos taurus cDNA clone IMAGE:7989656
          Length = 3683

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  gcctccctccacaaggtctt 316
            ||||||||||||||||||||
Sbjct: 2419 gcctccctccacaaggtctt 2438
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 237    gacttccgggtgcaggtcgacggcgccg 264
              ||||| ||||||||||||||||| ||||
Sbjct: 136750 gacttgcgggtgcaggtcgacggggccg 136777
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>emb|CR605258.1| full-length cDNA clone CS0DL004YB13 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1728

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 511 cacaaggtcttccagctgcc 492
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>emb|CR623628.1| full-length cDNA clone CS0DC001YO04 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1699

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 464 cacaaggtcttccagctgcc 445
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>emb|CR622122.1| full-length cDNA clone CS0DI057YB15 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1741

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 544 cacaaggtcttccagctgcc 525
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>emb|CR621364.1| full-length cDNA clone CS0DI031YM03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1722

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 499 cacaaggtcttccagctgcc 480
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>emb|CR620296.1| full-length cDNA clone CS0DI078YI08 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1772

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 537 cacaaggtcttccagctgcc 518
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>emb|CR620180.1| full-length cDNA clone CS0DI055YM09 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1641

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 477 cacaaggtcttccagctgcc 458
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>emb|CR619642.1| full-length cDNA clone CS0DA003YN12 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1669

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 469 cacaaggtcttccagctgcc 450
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>emb|CR613057.1| full-length cDNA clone CS0DB004YN01 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 500 cacaaggtcttccagctgcc 481
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>emb|CR605450.1| full-length cDNA clone CS0DI065YC02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1715

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 496 cacaaggtcttccagctgcc 477
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>emb|CR605577.1| full-length cDNA clone CS0DA002YH18 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1986

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 759 cacaaggtcttccagctgcc 740
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>emb|CR603520.1| full-length cDNA clone CS0DK008YP13 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1723

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 496 cacaaggtcttccagctgcc 477
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>emb|CR599521.1| full-length cDNA clone CS0DE008YL16 of Placenta of Homo sapiens
           (human)
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 420 cacaaggtcttccagctgcc 401
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>emb|CR596731.1| full-length cDNA clone CS0DF004YH16 of Fetal brain of Homo sapiens
           (human)
          Length = 1535

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 499 cacaaggtcttccagctgcc 480
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>emb|CR594015.1| full-length cDNA clone CS0DD001YP20 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1723

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 503 cacaaggtcttccagctgcc 484
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>emb|CR592980.1| full-length cDNA clone CS0DI073YP06 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 544 cacaaggtcttccagctgcc 525
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>emb|CR592602.1| full-length cDNA clone CS0DF037YF09 of Fetal brain of Homo sapiens
           (human)
          Length = 1832

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 611 cacaaggtcttccagctgcc 592
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>emb|CR591390.1| full-length cDNA clone CS0DI031YB16 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1610

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 537 cacaaggtcttccagctgcc 518
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>dbj|AK001318.1| Homo sapiens cDNA FLJ10456 fis, clone NT2RP1001395
          Length = 1787

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 520 cacaaggtcttccagctgcc 501
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>dbj|AK022488.1| Homo sapiens cDNA FLJ12426 fis, clone MAMMA1003113, highly similar
           to Mus musculus COP9 complex subunit 7a (COPS7a) mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 515 cacaaggtcttccagctgcc 496
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>dbj|AK021721.1| Homo sapiens cDNA FLJ11659 fis, clone HEMBA1004604, highly similar
           to Homo sapiens COP9 complex subunit 7a mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 573 cacaaggtcttccagctgcc 554
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 290      gcccggcgcctccctccaca 309
                ||||||||||||||||||||
Sbjct: 14486496 gcccggcgcctccctccaca 14486477
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 328      ccgccgccagcctcgacgac 347
                ||||||||||||||||||||
Sbjct: 27214435 ccgccgccagcctcgacgac 27214416
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>gb|AC125494.2| Homo sapiens 12 PAC RP4-761J14 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 143979

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   cacaaggtcttccagctgcc 325
             ||||||||||||||||||||
Sbjct: 69100 cacaaggtcttccagctgcc 69119
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>ref|NM_174357.2| Bos taurus interleukin 1 receptor antagonist (IL1RN), mRNA
          Length = 1874

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 gcctccctccacaaggtctt 316
           ||||||||||||||||||||
Sbjct: 759 gcctccctccacaaggtctt 778
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>gb|BC007843.1| Homo sapiens, clone IMAGE:4128465, mRNA
          Length = 3689

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  cacaaggtcttccagctgcc 325
            ||||||||||||||||||||
Sbjct: 1305 cacaaggtcttccagctgcc 1324
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>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0003E08
          Length = 135014

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    ccgccgccagcctcgacgac 347
              ||||||||||||||||||||
Sbjct: 122113 ccgccgccagcctcgacgac 122094
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     ggtgcaggtcgacggcgccg 264
               ||||||||||||||||||||
Sbjct: 2505226 ggtgcaggtcgacggcgccg 2505207
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>gb|AF210052.1|AF210052 Homo sapiens COP9 complex subunit 7a mRNA, complete cds
          Length = 1868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 537 cacaaggtcttccagctgcc 518
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>gb|AF193844.1|AF193844 Homo sapiens COP9 complex subunit 7a mRNA, complete cds
          Length = 1612

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 396 cacaaggtcttccagctgcc 377
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>gb|AF144047.1|AF144047 Streptomyces cinnamonensis macrolide type polyketide synthase gene,
           partial cds
          Length = 740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 274 ccctgcgcggcagcaggcccggcg 297
           ||||||||||||||||| ||||||
Sbjct: 542 ccctgcgcggcagcaggaccggcg 565
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>dbj|AB006206.3| Streptomyces griseus AmfR, AmfA, AmfB, AmfS and AmfT genes and 4
            ORFs, complete cds
          Length = 10657

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  gccggccgcttcgaggccgg 370
            ||||||||||||||||||||
Sbjct: 7638 gccggccgcttcgaggccgg 7657
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 290      gcccggcgcctccctccaca 309
                ||||||||||||||||||||
Sbjct: 14568497 gcccggcgcctccctccaca 14568478
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>emb|AJ243267.1|HSA243267 Homo sapiens GGT gene for gamma-glutamyltransferase, 5' UTR (exon
           1)
          Length = 2225

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 gcagcatccacacccagctc 138
           ||||||||||||||||||||
Sbjct: 575 gcagcatccacacccagctc 556
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>dbj|AP000356.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1995A5
          Length = 163795

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   gcagcatccacacccagctc 138
             ||||||||||||||||||||
Sbjct: 74584 gcagcatccacacccagctc 74565
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>dbj|AB033603.1| Homo sapiens COPS7a mRNA for cop9 complex subunit 7a, complete cds
          Length = 942

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 473 cacaaggtcttccagctgcc 454
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>dbj|AB005148.1| Bos taurus mRNA for IL-1 receptor antagonist, complete cds
          Length = 1874

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 gcctccctccacaaggtctt 316
           ||||||||||||||||||||
Sbjct: 759 gcctccctccacaaggtctt 778
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>dbj|AB014764.1| Homo sapiens mRNA for DERP10 (dermal papilla derived protein 10),
           complete cds
          Length = 828

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 cacaaggtcttccagctgcc 325
           ||||||||||||||||||||
Sbjct: 396 cacaaggtcttccagctgcc 377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,214,740
Number of Sequences: 3902068
Number of extensions: 3214740
Number of successful extensions: 71499
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70580
Number of HSP's gapped (non-prelim): 919
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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