Clone Name | bart58h10 |
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Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 72.0 bits (175), Expect = 7e-13 Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 7/100 (7%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNHPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353 P + FGDS+ D GNNN L + N+ YG+D+P GVATGRF+NGR DY++ G+ Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKL-KCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182 Query: 354 -------XXXXXXXXXXXXXXXXXXGVNFASGGAGILNET 452 GV+FASGGAG L +T Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQT 222
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 65.1 bits (157), Expect = 8e-11 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNHPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353 P + FGDS+ D GNNN + + +SN+ YG+D+ VATGRF+NG DY+A G+ Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKI-KSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 354 XXXX-XXXXXXXXXXXXXXGVNFASGGAG 437 GV+FASGGAG Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGAG 290
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 33.5 bits (75), Expect = 0.26 Identities = 26/84 (30%), Positives = 34/84 (40%) Frame = +3 Query: 183 YVFGDSMSDVGNNNYFQLSLARSNHPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGIXXX 362 YVFGDS+SD GNN Y +D NG T + D++A + GI Sbjct: 29 YVFGDSLSDGGNNGR------------YTVDGING------TESKLYNDFIAQQLGI--- 67 Query: 363 XXXXXXXXXXXXXXXGVNFASGGA 434 G N+A+GGA Sbjct: 68 -------ELVNSKKGGTNYAAGGA 84
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 32.7 bits (73), Expect = 0.45 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNH-PWYGIDYPNGVATGRFTNGRTIGDYMAAKFG 350 P + FGDS SD G LS A P +G + G GR+ +GR + D++A G Sbjct: 29 PAIFNFGDSNSDTGG-----LSAAFGQAGPPHGSSF-FGSPAGRYCDGRLVIDFIAESLG 82 Query: 351 IXXXXXXXXXXXXXXXXXXGVNFASGGAGI--LNET 452 + G NFA+ G+ I LN T Sbjct: 83 L--PYLSAFLDSVGSNFSHGANFATAGSPIRALNST 116
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 32.3 bits (72), Expect = 0.58 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNHPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353 P + FGDS SD G L +P YG + + +TGR+++GR I D++A F + Sbjct: 33 PAIFNFGDSNSDTGGKAAAFYPL----NPPYGETFFHR-STGRYSDGRLIIDFIAESFNL 87
>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68) Length = 443 Score = 32.0 bits (71), Expect = 0.76 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = -2 Query: 433 APPDAKLTPARKXSSASDRERNGGGGGMPNLAAM*SPMVLPLVNLPVATP 284 A P +LTP+R S R R GGGG P A SP P LP +TP Sbjct: 26 AHPSVRLTPSRP-SPLPHRPRGGGGG--PRGGARASPATQPPPLLPPSTP 72
>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 367 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = -2 Query: 454 PVSFRMPAPPDAKLTPARKXSSASDRERNGGGGGMPNLAAM*SPMVLPLVNLPVATP 284 P ++PA PD KL+ A SS + G G+P +P P + TP Sbjct: 192 PEPVQLPAVPDGKLSAASSASSLASAGSAEGASGIPQSKGQVAPATPPPPPVAPVTP 248
>C4BP_RAT (Q63514) C4b-binding protein alpha chain precursor (C4bp)| Length = 558 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Frame = +3 Query: 180 TYVFGDSMSDVGNNNYFQLSLARSNHPWY--------GIDYPNGVATGRFT 308 TY FGD +S N+ + +S+ W+ D+P +A GR+T Sbjct: 352 TYFFGDEVSYTCQNDIMLTATCKSDGTWHPRTPSCHQSCDFPPAIAHGRYT 402
>YJGB_BACSU (O34960) Hypothetical protein yjgB precursor| Length = 191 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = +3 Query: 165 TKGPVTYVFGDSMSDVGNNNYFQLSLARSNHPWYGIDY 278 TKG V FG+ VG +N F L P YG Y Sbjct: 76 TKGDVHAAFGEPERPVGGDNRFDLYHWNMGQPGYGFSY 113
>PURL_STAAR (Q6GI15) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 729 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +3 Query: 171 GPVTYVFGDSMSDVGNNNYFQLSLARSNHPWYGIDYPNGVATG 299 G YV GD+ D G + +L + NH + ID + V G Sbjct: 571 GDKLYVIGDTKDDFGGSQLEKLIYGKVNHEFESIDLSSEVKKG 613 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,078,383 Number of Sequences: 219361 Number of extensions: 568774 Number of successful extensions: 1914 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1897 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)