Clone Name | bart58h09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_187658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtct 94 |||||| |||||||||||| |||| ||| | ||||||||||||||| Sbjct: 100 gactactgcctctactgccacaacgtccccatcctcctcctcgtct 145
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtct 94 |||||| |||||||||||| |||| ||| | ||||||||||||||| Sbjct: 479975 gactactgcctctactgccacaacgtccccatcctcctcctcgtct 479930 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||| |||||||||||||||||| Sbjct: 10624093 cctcaagatcctcttcctcctcctc 10624069 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 34310526 tcctcttcctcctcctcgtc 34310507 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 35735606 catcctcttcctcctcctc 35735624 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 cctcttcctcctcctcgtc 93 ||||||||||||||||||| Sbjct: 22233640 cctcttcctcctcctcgtc 22233622 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 21837638 catcctcttcctcctcctc 21837620 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 7437492 catcctcttcctcctcctc 7437510 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 caacatcctcttcctcctc 87 ||||||||||||||||||| Sbjct: 3841990 caacatcctcttcctcctc 3841972
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtct 94 |||||| |||||||||||| |||| ||| | ||||||||||||||| Sbjct: 479973 gactactgcctctactgccacaacgtccccatcctcctcctcgtct 479928 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||| |||||||||||||||||| Sbjct: 10622194 cctcaagatcctcttcctcctcctc 10622170 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 34400998 tcctcttcctcctcctcgtc 34400979 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 35825679 catcctcttcctcctcctc 35825697 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 cctcttcctcctcctcgtc 93 ||||||||||||||||||| Sbjct: 22226669 cctcttcctcctcctcgtc 22226651 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 21830667 catcctcttcctcctcctc 21830649 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 7435327 catcctcttcctcctcctc 7435345 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 caacatcctcttcctcctc 87 ||||||||||||||||||| Sbjct: 3842101 caacatcctcttcctcctc 3842083
>dbj|AK108704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-A02, full insert sequence Length = 1276 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtct 94 |||||| |||||||||||| |||| ||| | ||||||||||||||| Sbjct: 228 gactactgcctctactgccacaacgtccccatcctcctcctcgtct 273
>gb|AY107971.1| Zea mays PCO148268 mRNA sequence Length = 1323 Score = 52.0 bits (26), Expect = 3e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 2 tgacgcccgcggaggctctctggttctggtggaccgccgggactcccgactacggcctct 61 |||||||||| ||||| || |||||| ||| ||||| ||| |||||||| ||||| Sbjct: 220 tgacgcccgccgaggcgctgtggttccggtacaccgcgggggtgtccgactaccacctct 279 Query: 62 actgcctcaacatcctcttcctcctcctcgtctt 95 ||||| |||||||||||||||| || ||||||| Sbjct: 280 actgctgcaacatcctcttcctcttcgtcgtctt 313
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtct 94 |||||| |||||||||||| |||| ||| | ||||||||||||||| Sbjct: 78435 gactactgcctctactgccacaacgtccccatcctcctcctcgtct 78390
>ref|NM_118404.2| Arabidopsis thaliana SMO1-2 (STEROL C4-METHYL OXIDASE); catalytic AT4G22756 (SMO1-2) mRNA, complete cds Length = 1298 Score = 46.1 bits (23), Expect = 0.017 Identities = 35/39 (89%) Strand = Plus / Plus Query: 57 cctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||||||| |||||| ||||||||| ||||| |||| Sbjct: 226 cctctactgccacaacattctcttcctcttcctcatctt 264
>ref|XM_635271.1| Dictyostelium discoideum hypothetical protein (DDB0205143), partial mRNA Length = 726 Score = 46.1 bits (23), Expect = 0.017 Identities = 23/23 (100%) Strand = Plus / Minus Query: 68 tcaacatcctcttcctcctcctc 90 ||||||||||||||||||||||| Sbjct: 590 tcaacatcctcttcctcctcctc 568
>ref|NM_197610.1| Oryza sativa (japonica cultivar-group) putative C-4 sterol methyl oxidase (OSJNBa0001O14.3), mRNA Length = 1219 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 182 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 228
>gb|AC102627.8| Mus musculus chromosome 14, clone RP23-466M3, complete sequence Length = 193228 Score = 46.1 bits (23), Expect = 0.017 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 tcaacatcctcttcctcctcctc 90 ||||||||||||||||||||||| Sbjct: 182167 tcaacatcctcttcctcctcctc 182189
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 46.1 bits (23), Expect = 0.017 Identities = 35/39 (89%) Strand = Plus / Minus Query: 57 cctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||||||| |||||| ||||||||| ||||| |||| Sbjct: 193295 cctctactgccacaacattctcttcctcttcctcatctt 193257
>emb|AL021635.1|ATT12H17 Arabidopsis thaliana DNA chromosome 4, BAC clone T12H17 (ESSAII project) Length = 89350 Score = 46.1 bits (23), Expect = 0.017 Identities = 35/39 (89%) Strand = Plus / Minus Query: 57 cctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||||||| |||||| ||||||||| ||||| |||| Sbjct: 49626 cctctactgccacaacattctcttcctcttcctcatctt 49588
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 51897 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 51943
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 20789498 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 20789544 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 20709824 tcctcttcctcctcctcgtc 20709843 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcg 91 |||||||||||||||||||| Sbjct: 9574348 catcctcttcctcctcctcg 9574367 Score = 38.2 bits (19), Expect = 4.1 Identities = 25/27 (92%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctcgt 92 ||||||| ||||| ||||||||||||| Sbjct: 11526436 cctcaacctcctcctcctcctcctcgt 11526410
>gb|AY087876.1| Arabidopsis thaliana clone 39135 mRNA, complete sequence Length = 1299 Score = 46.1 bits (23), Expect = 0.017 Identities = 35/39 (89%) Strand = Plus / Plus Query: 57 cctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||||||| |||||| ||||||||| ||||| |||| Sbjct: 227 cctctactgccacaacattctcttcctcttcctcatctt 265
>dbj|AK121804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097K13, full insert sequence Length = 1239 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 222 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 268
>dbj|AK098884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I03, full insert sequence Length = 1175 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 158 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 204
>gb|AY035393.1| Arabidopsis thaliana putative sterol 4-alpha-methyl-oxidase mRNA, complete cds Length = 900 Score = 46.1 bits (23), Expect = 0.017 Identities = 35/39 (89%) Strand = Plus / Plus Query: 57 cctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||||||| |||||| ||||||||| ||||| |||| Sbjct: 108 cctctactgccacaacattctcttcctcttcctcatctt 146
>dbj|AK061779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D10, full insert sequence Length = 1198 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 152 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 198
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gactacggcctctactgcctcaacatcctcttcctcctcctcgtctt 95 ||||||| ||||| ||| | |||||||||||||||| || ||||||| Sbjct: 20800762 gactacgtcctcttctggcacaacatcctcttcctcttcgtcgtctt 20800808 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 20721096 tcctcttcctcctcctcgtc 20721115 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcg 91 |||||||||||||||||||| Sbjct: 9580387 catcctcttcctcctcctcg 9580406 Score = 38.2 bits (19), Expect = 4.1 Identities = 25/27 (92%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctcgt 92 ||||||| ||||| ||||||||||||| Sbjct: 11532876 cctcaacctcctcctcctcctcctcgt 11532850
>gb|BC109014.1| Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 4, mRNA (cDNA clone MGC:124445 IMAGE:40048830), complete cds Length = 3901 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 758 tcctcttcctcctcctcgtctt 737
>gb|BC077534.1| Xenopus laevis translocation protein 1, mRNA (cDNA clone MGC:83323 IMAGE:6864297), complete cds Length = 3159 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 aacatcctcttcctcctcctcg 91 |||||||||||||||||||||| Sbjct: 1234 aacatcctcttcctcctcctcg 1213
>gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, complete sequence Length = 162379 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 128883 tcctcttcctcctcctcgtctt 128904
>gb|BC099952.1| Mus musculus cDNA sequence BC003993, mRNA (cDNA clone IMAGE:30021838), complete cds Length = 3390 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1420 tcctcttcctcctcctcgtctt 1399
>ref|XM_423729.1| PREDICTED: Gallus gallus similar to KIAA0802 protein (LOC426050), partial mRNA Length = 4104 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 caacatcctcttcctcctcctc 90 |||||||||||||||||||||| Sbjct: 386 caacatcctcttcctcctcctc 365
>gb|BC019405.1| Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 4, mRNA (cDNA clone MGC:30422 IMAGE:5066665), complete cds Length = 1261 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 427 tcctcttcctcctcctcgtctt 406
>ref|NM_133928.1| Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 4 (Chchd4), mRNA Length = 1261 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 427 tcctcttcctcctcctcgtctt 406
>ref|XM_752700.1| Ustilago maydis 521 hypothetical protein (UM01646.1) partial mRNA Length = 3063 Score = 44.1 bits (22), Expect = 0.067 Identities = 25/26 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctcg 91 ||||||||||||| |||||||||||| Sbjct: 1657 cctcaacatcctcatcctcctcctcg 1632
>gb|AC123798.5| Mus musculus BAC clone RP24-334O8 from chromosome 3, complete sequence Length = 168467 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 93210 tcctcttcctcctcctcgtctt 93189
>gb|AC125104.3| Mus musculus BAC clone RP24-219E4 from chromosome 18, complete sequence Length = 144661 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 13833 tcctcttcctcctcctcgtctt 13812
>gb|AC122039.4| Mus musculus BAC clone RP24-432H3 from chromosome 6, complete sequence Length = 169274 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 57829 tcctcttcctcctcctcgtctt 57850
>gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-314O1, complete sequence Length = 232462 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 161055 tcctcttcctcctcctcgtctt 161076
>ref|XM_541539.2| PREDICTED: Canis familiaris similar to neuronal PAS domain protein 1 (LOC484424), mRNA Length = 1806 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 646 tcctcttcctcctcctcgtctt 667
>gb|AC161456.3| Mus musculus BAC clone RP23-190H11 from chromosome 6, complete sequence Length = 208350 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 70918 tcctcttcctcctcctcgtctt 70897
>gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosome 13, complete sequence Length = 151819 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 50428 tcctcttcctcctcctcgtctt 50407
>ref|XM_500913.1| Yarrowia lipolytica CLIB122, YALI0B15081g predicted mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 aacatcctcttcctcctcctcg 91 |||||||||||||||||||||| Sbjct: 453 aacatcctcttcctcctcctcg 432
>gb|BT009981.1| Drosophila melanogaster RE54443 full insert cDNA Length = 6903 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 1697 catcctcttcctcctcctcgtc 1676
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 27954 tcctcttcctcctcctcgtctt 27975
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 221396 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 14522 catcctcttcctcctcctcgtc 14501 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 26524 catcctcttcctcctcctc 26506
>gb|AC129146.3| Rattus norvegicus 2 BAC CH230-266D19 (Children's Hospital Oakland Research Institute) complete sequence Length = 180291 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 7830 tcctcttcctcctcctcgtctt 7809 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 7719 tcctcttcctcctcctcgt 7701
>gb|AC127971.3| Rattus norvegicus 2 BAC CH230-320E2 (Children's Hospital Oakland Research Institute) complete sequence Length = 141084 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 80718 tcctcttcctcctcctcgtctt 80739 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 81066 tcctcttcctcctcctcgt 81084 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 81012 tcctcttcctcctcctcgt 81030 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 80931 tcctcttcctcctcctcgt 80949 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 80829 tcctcttcctcctcctcgt 80847
>gb|U03723.1|MMKCNA4S2 Mus musculus AKR voltage-gated potassium-channel (KCNA4) gene, complete cds Length = 4053 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1297 tcctcttcctcctcctcgtctt 1276
>gb|AC025477.6| Homo sapiens chromosome 5 clone RP11-432A10, complete sequence Length = 154272 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 23567 tcctcttcctcctcctcgtctt 23588
>gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163090 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 151048 catcctcttcctcctcctcgtc 151027
>gb|AC023686.4| Drosophila melanogaster X BAC RP98-30C1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170626 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 144281 catcctcttcctcctcctcgtc 144302
>ref|NM_206628.1| Drosophila melanogaster CG32767-RB, transcript variant B (CG32767), mRNA Length = 7540 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 1990 catcctcttcctcctcctcgtc 1969
>gb|AC116364.2| Homo sapiens chromosome 5 clone RP11-767I1, complete sequence Length = 188887 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 9430 tcctcttcctcctcctcgtctt 9409
>ref|NM_131975.3| Drosophila melanogaster CG32767-RA, transcript variant A (CG32767), mRNA Length = 7670 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 2120 catcctcttcctcctcctcgtc 2099
>gb|AC156988.6| Mus musculus chromosome 1, clone RP23-362H15, complete sequence Length = 148819 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 98931 tcctcttcctcctcctcgtctt 98910
>dbj|AK010479.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410012P20 product:HYPOTHETICAL 15.5 KDA PROTEIN homolog [Mus musculus], full insert sequence Length = 1216 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 398 tcctcttcctcctcctcgtctt 377
>emb|CR391198.1| Gallus gallus finished cDNA, clone ChEST209l18 Length = 968 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 caacatcctcttcctcctcctc 90 |||||||||||||||||||||| Sbjct: 448 caacatcctcttcctcctcctc 427
>dbj|AK036112.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630036K17 product:potassium voltage-gated channel, shaker-related subfamily, member 4, full insert sequence Length = 4780 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1596 tcctcttcctcctcctcgtctt 1575
>dbj|AK012745.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810014D17 product:HYPOTHETICAL 15.5 KDA PROTEIN, full insert sequence Length = 802 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 536 tcctcttcctcctcctcgtctt 515
>dbj|AK089988.1| Mus musculus RCB-0545 OHTA cDNA, RIKEN full-length enriched library, clone:G430046D16 product:CDNA: FLJ21982 FIS, CLONE HEP06188 homolog [Homo sapiens], full insert sequence Length = 2623 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1432 tcctcttcctcctcctcgtctt 1411
>gb|BT022159.1| Drosophila melanogaster IP01381 full insert cDNA Length = 5378 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 1646 catcctcttcctcctcctcgtc 1625
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 3302128 tcctcttcctcctcctcgtctt 3302107 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 17861193 tcctcttcctcctcctcgtc 17861212 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 6009676 catcctcttcctcctcctc 6009658 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 1266630 catcctcttcctcctcctc 1266612
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 89491 tcctcttcctcctcctcgtctt 89470
>gb|BC089523.1| Mus musculus cDNA sequence BC003993, mRNA (cDNA clone IMAGE:30504576), complete cds Length = 3299 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1447 tcctcttcctcctcctcgtctt 1426
>dbj|AK129404.1| Mus musculus mRNA for mKIAA1604 protein Length = 4555 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1410 tcctcttcctcctcctcgtctt 1389
>emb|BX465868.6| Zebrafish DNA sequence from clone DKEY-42I9 in linkage group 22, complete sequence Length = 222195 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 78279 catcctcttcctcctcctcgtc 78300
>emb|X16002.1|RNRCK4 Rat mRNA for putative potassium channel subunit protein (RCK4) Length = 3507 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 892 tcctcttcctcctcctcgtctt 871
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtc 93 |||||||||||||||||||||| Sbjct: 60601 catcctcttcctcctcctcgtc 60622
>gb|BC091407.1| Rattus norvegicus coiled-coil-helix-coiled-coil-helix domain containing 4, mRNA (cDNA clone MGC:109542 IMAGE:7324948), complete cds Length = 1367 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 515 tcctcttcctcctcctcgtctt 494
>emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chromosome 2, complete sequence Length = 192154 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 104535 tcctcttcctcctcctcgtctt 104556
>emb|BX293548.5| Mouse DNA sequence from clone RP23-417K1 on chromosome 2, complete sequence Length = 195079 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 120748 tcctcttcctcctcctcgtctt 120769
>emb|AL671299.18| Mouse DNA sequence from clone RP23-281K21 on chromosome X, complete sequence Length = 214997 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 57522 tcctcttcctcctcctcgtctt 57501
>ref|NM_001013431.1| Rattus norvegicus coiled-coil-helix-coiled-coil-helix domain containing 4 (Chchd4), mRNA Length = 1367 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 515 tcctcttcctcctcctcgtctt 494
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 aacatcctcttcctcctcctcg 91 |||||||||||||||||||||| Sbjct: 2010930 aacatcctcttcctcctcctcg 2010909
>ref|NM_021275.2| Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 4 (Kcna4), mRNA Length = 4780 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 1596 tcctcttcctcctcctcgtctt 1575
>ref|NM_012971.1| Rattus norvegicus potassium voltage-gated channel, shaker-related subfamily, member 4 (Kcna4), mRNA Length = 3201 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 478 tcctcttcctcctcctcgtctt 457
>gb|M32867.1|RATKCHAN Rat potassium channel protein (RHK1) mRNA, complete cds Length = 3201 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 478 tcctcttcctcctcctcgtctt 457
>emb|AL663077.8| Mouse DNA sequence from clone RP23-22K4 on chromosome 2, complete sequence Length = 96128 Score = 44.1 bits (22), Expect = 0.067 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtctt 95 |||||||||||||||||||||| Sbjct: 41122 tcctcttcctcctcctcgtctt 41143
>gb|U53154.1| Caenorhabditis elegans cosmid C33G8, complete sequence Length = 39103 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 atcctcttcctcctcctcgtc 93 ||||||||||||||||||||| Sbjct: 28146 atcctcttcctcctcctcgtc 28126
>gb|BC058052.1| Danio rerio zgc:63484, mRNA (cDNA clone MGC:63484 IMAGE:2601726), complete cds Length = 2672 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 ||||| ||||||||||||||||||| Sbjct: 1712 cctcatcatcctcttcctcctcctc 1688
>gb|AC117740.12| Mus musculus chromosome 8, clone RP24-134P12, complete sequence Length = 186401 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 26528 tcctcttcctcctcctcgtct 26508
>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence Length = 235095 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cctcaacatcctcttcctcctcctc 90 ||||||| ||||||||||||||||| Sbjct: 224376 cctcaacctcctcttcctcctcctc 224400
>gb|AC127358.3| Mus musculus BAC clone RP23-109B9 from chromosome 18, complete sequence Length = 162003 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cctcttcctcctcctcgtctt 95 ||||||||||||||||||||| Sbjct: 149714 cctcttcctcctcctcgtctt 149694 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cctcttcctcctcctcgtctt 95 ||||||||||||||||||||| Sbjct: 149615 cctcttcctcctcctcgtctt 149595
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cctcttcctcctcctcgtctt 95 ||||||||||||||||||||| Sbjct: 144427 cctcttcctcctcctcgtctt 144447 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cctcttcctcctcctcgtctt 95 ||||||||||||||||||||| Sbjct: 144328 cctcttcctcctcctcgtctt 144348
>gb|AC129206.3| Mus musculus BAC clone RP24-269P22 from chromosome 8, complete sequence Length = 181214 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 20050 tcctcttcctcctcctcgtct 20070
>gb|AC122454.4| Mus musculus BAC clone RP24-263I14 from chromosome 17, complete sequence Length = 198341 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||||||||||| |||||||||| Sbjct: 149642 cctcaacatcctctccctcctcctc 149666
>gb|AY373377.1| Aedes aegypti vitellogenin-C (Vg-C) gene, complete cds Length = 9101 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 acatcctcttcctcctcctcgtctt 95 |||||||||||||||||||| |||| Sbjct: 2423 acatcctcttcctcctcctcatctt 2447
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||| |||||||||||||||||| Sbjct: 41007 cctcaagatcctcttcctcctcctc 40983
>gb|U52112.2| Homo sapiens chromosome X clone QLL-D9139, Qc-7G12, Qc-7C1, Qc-12B2, Qc-12D5, QLL-A074, Qc-9D3 map q28, complete sequence Length = 181343 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 ||||||||||||| ||||||||||| Sbjct: 157632 cctcaacatcctcctcctcctcctc 157608
>ref|NM_200670.1| Danio rerio zgc:63484 (zgc:63484), mRNA Length = 2672 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 ||||| ||||||||||||||||||| Sbjct: 1712 cctcatcatcctcttcctcctcctc 1688
>gb|AC011530.6| Homo sapiens chromosome 19 clone LLNLR-227G9, complete sequence Length = 45572 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||||||||||||||| |||||| Sbjct: 17756 cctcaacatcctcttccttctcctc 17780
>dbj|AK132337.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022422P04 product:unclassifiable, full insert sequence Length = 3470 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 1421 tcctcttcctcctcctcgtct 1401
>ref|NM_072373.1| Caenorhabditis elegans C33G8.3 (C33G8.3) mRNA, complete cds Length = 429 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 atcctcttcctcctcctcgtc 93 ||||||||||||||||||||| Sbjct: 285 atcctcttcctcctcctcgtc 265
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 6621243 tcctcttcctcctcctcgtct 6621263 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ctcttcctcctcctcgtctt 95 |||||||||||||||||||| Sbjct: 27655747 ctcttcctcctcctcgtctt 27655766
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 33210588 tcctcttcctcctcctcgtct 33210568 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 42941800 tcctcttcctcctcctcgtc 42941819 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 43062398 tcctcttcctcctcctcgt 43062380 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgt 92 ||||||||||||||||||| Sbjct: 1837628 tcctcttcctcctcctcgt 1837646
>emb|AL772256.15| Mouse DNA sequence from clone RP23-141N19 on chromosome 2, complete sequence Length = 191321 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cctcttcctcctcctcgtctt 95 ||||||||||||||||||||| Sbjct: 9122 cctcttcctcctcctcgtctt 9142
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 147498 tcctcttcctcctcctcgtct 147478
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 3835 tcctcttcctcctcctcgtct 3815
>dbj|AP005719.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1130E10 Length = 151606 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 14242 tcctcttcctcctcctcgtct 14262
>emb|BX649293.4| Mouse DNA sequence from clone RP23-360N18 on chromosome 2, complete sequence Length = 126043 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cctcttcctcctcctcgtctt 95 ||||||||||||||||||||| Sbjct: 49215 cctcttcctcctcctcgtctt 49235
>emb|AJ301662.2|LSE301662 Lucilia sericata hb gene for Hunchback protein Length = 2373 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 atcctcttcctcctcctcgtc 93 ||||||||||||||||||||| Sbjct: 1719 atcctcttcctcctcctcgtc 1699
>dbj|AK120853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023P20, full insert sequence Length = 3397 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||| |||||||||||||||||| Sbjct: 911 cctcaagatcctcttcctcctcctc 887
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtct 94 ||||||||||||||||||||| Sbjct: 133337 tcctcttcctcctcctcgtct 133357
>emb|CR855299.12| Zebrafish DNA sequence from clone CH211-199C22 in linkage group 16, complete sequence Length = 116933 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cctcaacatcctcttcctcctcctc 90 ||||| ||||||||||||||||||| Sbjct: 97189 cctcatcatcctcttcctcctcctc 97213 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctc 90 ||||||||||||||||||| Sbjct: 9105 catcctcttcctcctcctc 9123
>gb|AC131323.10| Mus musculus chromosome 17, clone RP23-421I23, complete sequence Length = 239215 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cctcaacatcctcttcctcctcctc 90 |||||||||||||| |||||||||| Sbjct: 36361 cctcaacatcctctccctcctcctc 36385
>gb|AC126445.5| Mus musculus BAC clone RP23-307P24 from 8, complete sequence Length = 167770 Score = 42.1 bits (21), Expect = 0.27 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cctcaacatcctcttcctcctcctc 90 ||||||| ||||||||||||||||| Sbjct: 157949 cctcaacctcctcttcctcctcctc 157925
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 96179 tcctcttcctcctcctcgtc 96160
>ref|XM_523601.1| PREDICTED: Pan troglodytes hypothetical protein XP_523601 (LOC468210), mRNA Length = 2181 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2084 tcctcttcctcctcctcgtc 2065
>gb|BC076996.1| Xenopus tropicalis v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian), mRNA (cDNA clone MGC:89626 IMAGE:6995572), complete cds Length = 1782 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 1084 catcctcttcctcctcctcttctt 1061
>gb|AC154789.2| Mus musculus BAC clone RP24-479C22 from chromosome 17, complete sequence Length = 163182 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 146558 catcctcttcctcctcctcctctt 146581
>gb|AC154842.2| Mus musculus BAC clone RP23-55C11 from chromosome 17, complete sequence Length = 252431 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 29616 catcctcttcctcctcctcctctt 29639
>ref|XM_474370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 847 tcctcttcctcctcctcgtc 866
>ref|XM_519398.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC5242 (LOC463748), mRNA Length = 758 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 655 acatcctcttcctcctcctc 636
>ref|NM_001002937.1| Canis familiaris high-mobility group box 1 (HMGB1), mRNA Length = 2236 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||| ||||||||||||| Sbjct: 678 catcctcttcatcctcctcgtctt 655
>ref|NM_197601.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015I11.19), mRNA Length = 999 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 226 tcctcttcctcctcctcgtc 245
>ref|NM_195864.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0035F15.9), mRNA Length = 2742 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcg 91 |||||||||||||||||||| Sbjct: 84 catcctcttcctcctcctcg 103
>ref|NM_189474.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1587 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 146 tcctcttcctcctcctcgtc 165
>ref|XM_479405.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ctcttcctcctcctcgtctt 95 |||||||||||||||||||| Sbjct: 610 ctcttcctcctcctcgtctt 591
>ref|XM_479404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1646 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ctcttcctcctcctcgtctt 95 |||||||||||||||||||| Sbjct: 388 ctcttcctcctcctcgtctt 369
>ref|NM_012951.1| Rattus norvegicus fibroblast growth factor 10 (Fgf10), mRNA Length = 648 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 163 tcctcttcctcctcctcgtc 182
>gb|AY431859.1| Aedes aegypti ASAP ID: 35851 conserved unknown mRNA sequence Length = 705 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 435 tcctcttcctcctcctcgtc 416
>gb|AC161181.3| Mus musculus chromosome 3, clone RP23-10I23, complete sequence Length = 218083 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 128410 catcctcttcctcctcctcctctt 128387
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcg 91 |||||||||||||||||||| Sbjct: 55309 catcctcttcctcctcctcg 55290
>ref|XM_883416.1| PREDICTED: Bos taurus hypothetical protein LOC619148 (LOC619148), partial mRNA Length = 236 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 148 tcctcttcctcctcctcgtc 129
>ref|XM_613342.2| PREDICTED: Bos taurus similar to TGF-beta induced apotosis protein 2 (LOC540832), mRNA Length = 1704 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 994 catcctcttcctcctcctcctctt 971
>ref|XM_613602.2| PREDICTED: Bos taurus similar to serine/arginine repetitive matrix 2 (LOC534002), mRNA Length = 1111 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 133 tcctcttcctcctcctcgtc 152
>ref|XM_427018.1| PREDICTED: Gallus gallus similar to PAP-1 binding protein (LOC429462), partial mRNA Length = 577 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 291 tcctcttcctcctcctcgtc 272
>ref|XM_363322.1| Magnaporthe grisea 70-15 hypothetical protein (MG01248.4) partial mRNA Length = 1266 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1118 tcctcttcctcctcctcgtc 1099
>ref|XM_960739.1| Neurospora crassa OR74A hypothetical protein (NCU00692.1) partial mRNA Length = 1716 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1538 tcctcttcctcctcctcgtc 1519
>ref|XM_960365.1| Neurospora crassa OR74A hypothetical protein (NCU02685.1) partial mRNA Length = 6630 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 6623 tcctcttcctcctcctcgtc 6604
>gb|BC072816.1| Xenopus laevis similar to heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A), mRNA (cDNA clone MGC:80160 IMAGE:4970321), complete cds Length = 2856 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||||| ||||||||||| Sbjct: 539 catcctcttccttctcctcgtctt 516
>gb|BC042708.1| Mus musculus SDA1 domain containing 1, mRNA (cDNA clone MGC:51387 IMAGE:5024980), complete cds Length = 2259 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcaacatcctcttcctcctcctc 90 |||| ||||||||||||||||||| Sbjct: 1626 ctcaccatcctcttcctcctcctc 1603
>gb|BC053148.1| Danio rerio zgc:63922, mRNA (cDNA clone MGC:63922 IMAGE:6790764), complete cds Length = 1278 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 791 tcctcttcctcctcctcgtc 772
>ref|XM_323048.1| Neurospora crassa OR74A hypothetical protein ( (AL513443) hypothetical protein [Neurospora crassa OR74A] ) (NCU03747.1) partial mRNA Length = 1122 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1115 tcctcttcctcctcctcgtc 1096
>ref|XM_951173.1| Neurospora crassa OR74A hypothetical protein ( (AL390189) related to transport protein USO1 [Neurospora crassa OR74A] ) (NCU01644.1) partial mRNA Length = 3516 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 3484 catcctcctcctcctcctcgtctt 3461
>gb|BC000168.2| Homo sapiens hypothetical protein MGC5242, mRNA (cDNA clone MGC:5242 IMAGE:2900206), complete cds Length = 1498 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 622 acatcctcttcctcctcctc 603
>ref|XM_956001.1| Neurospora crassa OR74A hypothetical protein ( (AL513443) hypothetical protein [Neurospora crassa OR74A] ) (NCU03747.1) partial mRNA Length = 1122 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1115 tcctcttcctcctcctcgtc 1096
>ref|XM_959504.1| Neurospora crassa OR74A hypothetical protein (NCU02070.1) partial mRNA Length = 1920 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||||||||||| ||||| Sbjct: 1762 catcctcttcctcctcctggtctt 1739
>ref|XM_959887.1| Neurospora crassa OR74A hypothetical protein (NCU03121.1) partial mRNA Length = 2727 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2161 tcctcttcctcctcctcgtc 2180
>ref|XM_324871.1| Neurospora crassa OR74A hypothetical protein (NCU00692.1) partial mRNA Length = 1716 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1538 tcctcttcctcctcctcgtc 1519
>gb|BC073449.1| Xenopus laevis cDNA clone MGC:80952 IMAGE:5516344, complete cds Length = 1193 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||||||||| ||||||| Sbjct: 702 catcctcttcctcctcttcgtctt 679
>ref|XM_328082.1| Neurospora crassa OR74A hypothetical protein ( (AL390189) related to transport protein USO1 [Neurospora crassa OR74A] ) (NCU01644.1) partial mRNA Length = 3516 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 3484 catcctcctcctcctcctcgtctt 3461
>ref|XM_329259.1| Neurospora crassa OR74A hypothetical protein (NCU02070.1) partial mRNA Length = 1920 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||||||||||| ||||| Sbjct: 1762 catcctcttcctcctcctggtctt 1739
>ref|XM_330556.1| Neurospora crassa OR74A hypothetical protein (NCU03121.1) partial mRNA Length = 2727 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2161 tcctcttcctcctcctcgtc 2180
>ref|XM_331883.1| Neurospora crassa OR74A hypothetical protein (NCU02685.1) partial mRNA Length = 6630 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 6623 tcctcttcctcctcctcgtc 6604
>gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145666 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 92126 tcctcttcctcctcctcgtc 92145
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 5584 catcctcttcctcctcctcctctt 5607
>ref|NM_018749.1| Mus musculus eukaryotic translation initiation factor 3, subunit 7 (zeta) (Eif3s7), mRNA Length = 1849 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1715 tcctcttcctcctcctcgtc 1696
>gb|AC090972.5| Canis familiaris clone RP81-391L22, complete sequence Length = 197944 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atcctcttcctcctcctcgt 92 |||||||||||||||||||| Sbjct: 99017 atcctcttcctcctcctcgt 99036
>gb|BC005751.1| Mus musculus SDA1 domain containing 1, mRNA (cDNA clone IMAGE:3600976), partial cds Length = 692 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcaacatcctcttcctcctcctc 90 |||| ||||||||||||||||||| Sbjct: 64 ctcaccatcctcttcctcctcctc 41
>gb|AC103649.8| Mus musculus chromosome 3, clone RP24-359A15, complete sequence Length = 184404 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 152368 catcctcttcctcctcctcctctt 152345
>gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196622 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 41094 tcctcttcctcctcctcgtc 41113
>gb|BC067350.1| Homo sapiens hypothetical protein MGC5242, mRNA (cDNA clone MGC:78506 IMAGE:6568468), complete cds Length = 1541 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 659 acatcctcttcctcctcctc 640
>gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, complete sequence Length = 220452 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 ctcaacatcctcttcctcctcctc 90 |||||||||||| ||||||||||| Sbjct: 10511 ctcaacatcctcctcctcctcctc 10534
>ref|XM_001002784.1| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein (Parc), mRNA Length = 7833 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 7597 acatcctcttcctcctcctc 7578
>ref|XM_924078.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 12 (Parc), mRNA Length = 8462 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 8226 acatcctcttcctcctcctc 8207
>ref|XM_924081.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 13 (Parc), mRNA Length = 3075 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 2839 acatcctcttcctcctcctc 2820
>ref|XM_924087.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 14 (Parc), mRNA Length = 4357 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 4121 acatcctcttcctcctcctc 4102
>ref|XM_924075.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 11 (Parc), mRNA Length = 6840 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 6604 acatcctcttcctcctcctc 6585
>ref|XM_916032.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 9 (Parc), mRNA Length = 7818 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 7582 acatcctcttcctcctcctc 7563
>ref|XM_355017.5| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 1 (Parc), mRNA Length = 8462 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 8226 acatcctcttcctcctcctc 8207
>ref|XM_902441.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 7 (Parc), mRNA Length = 3075 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 2839 acatcctcttcctcctcctc 2820
>ref|XM_902442.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 8 (Parc), mRNA Length = 4357 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 4121 acatcctcttcctcctcctc 4102
>ref|XM_902440.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 6 (Parc), mRNA Length = 6840 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 6604 acatcctcttcctcctcctc 6585
>ref|XM_895029.2| PREDICTED: Mus musculus p53-associated parkin-like cytoplasmic protein, transcript variant 3 (Parc), mRNA Length = 7818 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 7582 acatcctcttcctcctcctc 7563
>gb|AY135521.1|AY135520S2 Canis familiaris high mobility group B1 protein (HMGB1) gene, exons 2 through 5 and complete cds Length = 3959 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||| ||||||||||||| Sbjct: 2401 catcctcttcatcctcctcgtctt 2378
>gb|AY135519.1| Canis familiaris high mobility group protein B1 mRNA, complete cds Length = 2236 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||| ||||||||||||| Sbjct: 678 catcctcttcatcctcctcgtctt 655
>gb|BC046700.1| Xenopus laevis similar to heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A), mRNA (cDNA clone IMAGE:5542936), partial cds Length = 2021 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 |||||||||||| ||||||||||| Sbjct: 594 catcctcttccttctcctcgtctt 571
>gb|AF549604.1| Sympetrum sanguineum internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 738 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggtggaccgccgggactccc 48 |||||||||||||||||||| Sbjct: 472 ggtggaccgccgggactccc 453
>ref|XM_822950.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.0580) partial mRNA Length = 10383 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 6338 tcctcttcctcctcctcgtc 6319
>ref|XM_747328.1| Aspergillus fumigatus Af293 CBF/NF-Y family transcription factor (Afu1g10550) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 673 catcctcatcctcctcctcgtctt 650
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 149345 acatcctcttcctcctcctc 149326
>gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome 1, complete sequence Length = 197978 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 27341 tcctcttcctcctcctcgtc 27322
>ref|XM_802721.1| Trypanosoma cruzi strain CL Brener PIF1 helicase-like protein (Tc00.1047053509553.50) partial mRNA Length = 2904 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 1898 acatcctcttcctcctcctc 1879
>gb|AC122365.4| Mus musculus BAC clone RP23-447A7 from chromosome 5, complete sequence Length = 195492 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 ctcaacatcctcttcctcctcctc 90 |||| ||||||||||||||||||| Sbjct: 38374 ctcaccatcctcttcctcctcctc 38397
>ref|XM_805113.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504071.60) partial mRNA Length = 993 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 359 tcctcttcctcctcctcgtc 340
>ref|XM_859533.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 6 (LCR-F1), mRNA Length = 2894 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2007 tcctcttcctcctcctcgtc 2026
>ref|XM_859516.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 5 (LCR-F1), mRNA Length = 2861 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1974 tcctcttcctcctcctcgtc 1993
>ref|XM_537663.2| PREDICTED: Canis familiaris bZIP protein, transcript variant 1 (LCR-F1), mRNA Length = 2658 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1771 tcctcttcctcctcctcgtc 1790
>ref|XM_859481.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 4 (LCR-F1), mRNA Length = 2696 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1809 tcctcttcctcctcctcgtc 1828
>ref|XM_846772.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 3 (LCR-F1), mRNA Length = 2984 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2097 tcctcttcctcctcctcgtc 2116
>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence Length = 196285 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 102905 catcctcttcctcctcctcttctt 102882
>gb|AC122906.4| Mus musculus BAC clone RP23-47D11 from 10, complete sequence Length = 191190 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 130952 tcctcttcctcctcctcgtc 130933
>gb|AC098734.3| Mus musculus BAC clone RP23-121L4 from 14, complete sequence Length = 196797 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 154454 acatcctcttcctcctcctc 154473
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 182945 catcctcttcctcctcctcatctt 182922
>ref|XM_546221.2| PREDICTED: Canis familiaris similar to ADP-ribosylation factor-like 10 (LOC489105), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ctcttcctcctcctcgtctt 95 |||||||||||||||||||| Sbjct: 798 ctcttcctcctcctcgtctt 779
>emb|CR694640.2|CNS0FYXO Tetraodon nigroviridis full-length cDNA Length = 1015 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 317 tcctcttcctcctcctcgtc 298
>emb|CR694647.1|CNS0FYXV Tetraodon nigroviridis full-length cDNA Length = 1011 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 317 tcctcttcctcctcctcgtc 298
>emb|CR691027.2|CNS0FW5B Tetraodon nigroviridis full-length cDNA Length = 1013 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 319 tcctcttcctcctcctcgtc 300
>emb|CR686152.2|CNS0FSDW Tetraodon nigroviridis full-length cDNA Length = 1005 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 311 tcctcttcctcctcctcgtc 292
>emb|CR685794.2|CNS0FS3Y Tetraodon nigroviridis full-length cDNA Length = 981 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 318 tcctcttcctcctcctcgtc 299
>emb|CR685578.2|CNS0FRXY Tetraodon nigroviridis full-length cDNA Length = 1001 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 307 tcctcttcctcctcctcgtc 288
>gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, complete sequence Length = 191928 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 9954 tcctcttcctcctcctcgtc 9973
>emb|CR678930.2|CNS0FMTA Tetraodon nigroviridis full-length cDNA Length = 1247 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 443 tcctcttcctcctcctcgtc 424
>emb|CR669557.2|CNS0FFLN Tetraodon nigroviridis full-length cDNA Length = 1222 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 429 tcctcttcctcctcctcgtc 410
>gb|AC090530.3| Homo sapiens chromosome 1 clone RP11-416G1, complete sequence Length = 200562 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 165325 catcctcttcctcctcctcatctt 165348
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 10065 acatcctcttcctcctcctc 10046
>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence Length = 211181 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 197562 tcctcttcctcctcctcgtc 197543
>emb|BX936390.7| Zebrafish DNA sequence from clone DKEY-6E2 in linkage group 6, complete sequence Length = 168226 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 53650 tcctcttcctcctcctcgtc 53669
>gb|AY353563.1| Anopheles gambiae relish mRNA, complete cds Length = 3753 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 3082 tcctcttcctcctcctcgtc 3063
>gb|BC098333.1| Mus musculus EF-hand calcium binding domain 4A, mRNA (cDNA clone MGC:107094 IMAGE:5256663), complete cds Length = 1687 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcaacatcctcttcctcctcctc 90 |||||||||||| ||||||||||| Sbjct: 471 ctcaacatcctcctcctcctcctc 448
>gb|BC048916.1| Mus musculus EF-hand calcium binding domain 4A, mRNA (cDNA clone IMAGE:6307316), partial cds Length = 1726 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcaacatcctcttcctcctcctc 90 |||||||||||| ||||||||||| Sbjct: 510 ctcaacatcctcctcctcctcctc 487
>gb|BC026645.1| Mus musculus EF-hand calcium binding domain 4A, mRNA (cDNA clone IMAGE:4986761), partial cds Length = 1289 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcaacatcctcttcctcctcctc 90 |||||||||||| ||||||||||| Sbjct: 84 ctcaacatcctcctcctcctcctc 61
>gb|BC020591.1| Homo sapiens transmembrane protein 132E, mRNA (cDNA clone IMAGE:4421249), partial cds Length = 3336 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2111 tcctcttcctcctcctcgtc 2092
>emb|Z98748.1|HS381E2 Human DNA sequence from clone RP3-381E2 on chromosome 6p12, complete sequence Length = 111398 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 69699 tcctcttcctcctcctcgtc 69718
>gb|BC018318.1| Homo sapiens transmembrane protein 132E, mRNA (cDNA clone IMAGE:4154275), partial cds Length = 2115 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 882 tcctcttcctcctcctcgtc 863
>ref|NM_001025103.1| Mus musculus EF-hand calcium binding domain 4A (Efcab4a), mRNA Length = 1687 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcaacatcctcttcctcctcctc 90 |||||||||||| ||||||||||| Sbjct: 471 ctcaacatcctcctcctcctcctc 448
>emb|AL445438.27| Human DNA sequence from clone RP11-427B20 on chromosome 1 Contains two CpG islands, complete sequence Length = 108271 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 52276 tcctcttcctcctcctcgtc 52257
>ref|XM_783179.1| PREDICTED: Strongylocentrotus purpuratus similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (LOC583259), mRNA Length = 1494 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 335 catcctcctcctcctcctcgtctt 358
>ref|XM_505583.1| Yarrowia lipolytica CLIB122, YALI0F18546g predicted mRNA Length = 2985 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2745 tcctcttcctcctcctcgtc 2726
>emb|AL360294.11| Human DNA sequence from clone RP11-400F1 on chromosome 1, complete sequence Length = 111990 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 53220 tcctcttcctcctcctcgtc 53239
>ref|XM_789748.1| PREDICTED: Strongylocentrotus purpuratus similar to Caspase recruitment domain protein 4 (LOC590131), mRNA Length = 3001 Score = 40.1 bits (20), Expect = 1.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 tcaacatcctcttcctcctcctcgtctt 95 ||||| ||||||||||||||||| |||| Sbjct: 536 tcaacttcctcttcctcctcctcttctt 509
>emb|AL390755.5| Human DNA sequence from clone RP11-472K17 on chromosome 13 Contains a novel gene, the 3' end of the COL4A1 gene for collagen type IV alpha 1 and a CpG island, complete sequence Length = 186120 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 151548 tcctcttcctcctcctcgtc 151529
>emb|AL359205.15| Human DNA sequence from clone RP11-345N16 on chromosome 1 Contains a novel gene and the 3' end of a variant of novel gene (MGC22773), complete sequence Length = 169434 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 61088 catcctcttcctcctcctcatctt 61111
>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence Length = 270695 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ctcttcctcctcctcgtctt 95 |||||||||||||||||||| Sbjct: 124358 ctcttcctcctcctcgtctt 124377
>gb|AC114559.8| Mus musculus, clone RP23-50G21, complete sequence Length = 173404 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 60688 acatcctcttcctcctcctc 60707
>emb|AL121983.13|HSA160H22 Human DNA sequence from clone RP11-160H22 on chromosome 1q23.2-24.3 Contains three novel genes, a ribosomal protein L30 (RPL30) pseudogene, the 3' end of a novel gene, the 5' end of a novel gene (KIAA2025) and a CpG island, complete sequence Length = 165436 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 35608 tcctcttcctcctcctcgtc 35627
>emb|AL031291.3|HS796F18 Human DNA sequence from clone RP4-796F18 on chromosome 1p36.11-36.33 Contains the gene for transitional epithelia response protein (TERE1) and a ubiquitin-conjugating enzyme E2 variant 2 (UBE2V2) pseudogene, complete sequence Length = 118968 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 71843 tcctcttcctcctcctcgtc 71862
>emb|AL021920.1|HS163M9 Human DNA sequence from clone RP1-163M9 on chromosome 1p35.1-36.21 Contains a novel pseudogene, a eukaryotic translation initiation factor 1A pseudogene 1 (EIF1AP1), part of a novel gene (LOC284729), a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and five CpG islands, complete sequence Length = 118067 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 110665 tcctcttcctcctcctcgtc 110646
>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5, complete sequence Length = 162086 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 92830 catcctcttcctcctcctcttctt 92807
>ref|XM_967398.1| PREDICTED: Tribolium castaneum similar to 39 kDa FK506-binding nuclear protein (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (LOC661223), mRNA Length = 1134 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 562 catcctcctcctcctcctcgtctt 539
>emb|BX023738.1|CNS08QHA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA36BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 223 tcctcttcctcctcctcgtc 204
>emb|BX015642.1|CNS08K8E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CA04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 975 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 288 tcctcttcctcctcctcgtc 269
>emb|CR457367.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0521D for gene IPO4, importin 4; complete cds, incl. stopcodon Length = 2274 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 1487 tcctcttcctcctcctcgtc 1468
>emb|BX883048.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 7/11 Length = 349943 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 94986 tcctcttcctcctcctcgtc 94967
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8 Length = 138191 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 128163 tcctcttcctcctcctcgtc 128182
>ref|NM_001006873.1| Xenopus tropicalis v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) (mycn), mRNA Length = 1782 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 1084 catcctcttcctcctcctcttctt 1061
>emb|AL670543.1|NCB7K22 Neurospora crassa DNA linkage group II BAC clone B7K22 Length = 88306 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 63242 catcctcctcctcctcctcgtctt 63219
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 47725 tcctcttcctcctcctcgtc 47706
>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic acid oxidase, a novel gene (LOC327969), the 5' end of the Sez6 gene for seizure related gene 6 and two CpG islands, complete sequence Length = 220176 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 98301 tcctcttcctcctcctcgtc 98320
>emb|AL513443.1|NC93G11 Neurospora crassa DNA linkage group V Cosmid contig 93G11 Length = 86075 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 74601 tcctcttcctcctcctcgtc 74620
>emb|AL390189.2|NCB13I18 Neurospora crassa DNA linkage group II BAC clone B13I18 Length = 62393 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 4387 catcctcctcctcctcctcgtctt 4364
>emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chromosome 11 Contains a PDZ domain containing guanine (Pdzgef1) pseudogene, a tubulin alpha 4 (Tuba4) pseudogene , an olfactory receptor pseudogene, a novel pseudogene and the 3' end of a novel gene, complete sequence Length = 108424 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 73781 tcctcttcctcctcctcgtc 73762
>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the 3' end of the Vdac1 gene for voltage-dependent anion channel 1, a novel gene (9530068E07Rik), a ubiquinol-cytochrome c reductase subunit (Uqcr) pseudogene, a novel pseudogene, a ribosomal protein S28 (Rps28) pseudogene and a CpG island, complete sequence Length = 165536 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 100697 tcctcttcctcctcctcgtc 100678
>gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, complete sequence Length = 152689 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 92431 catcctcttcctcctcctcctctt 92408
>gb|AC119148.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0035F15, complete sequence Length = 138335 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catcctcttcctcctcctcg 91 |||||||||||||||||||| Sbjct: 62421 catcctcttcctcctcctcg 62440
>emb|AJ721114.1| Gallus gallus mRNA for hypothetical protein, clone 35i21 Length = 4793 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||||||||||||||| |||| Sbjct: 887 catcctcttcctcctcctcctctt 864
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 146295 acatcctcttcctcctcctc 146276
>gb|DQ096949.1| Xenopus laevis comp52 mRNA, complete sequence Length = 682 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ctcttcctcctcctcgtctt 95 |||||||||||||||||||| Sbjct: 111 ctcttcctcctcctcgtctt 92
>emb|CR858017.1| Pongo pygmaeus mRNA; cDNA DKFZp468O157 (from clone DKFZp468O157) Length = 1822 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 419 acatcctcttcctcctcctc 400
>gb|AE014173.1| Mus musculus piebald deletion region section 1 of 11 of the complete sequence Length = 400029 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 304393 acatcctcttcctcctcctc 304374
>gb|AF493544.1| Oryctolagus cuniculus potassium channel alpha subunit Kv1.4 mRNA, partial cds Length = 1926 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 catcctcttcctcctcctcgtctt 95 ||||||| |||||||||||||||| Sbjct: 369 catcctcgtcctcctcctcgtctt 346
>gb|AC009000.6| Homo sapiens chromosome 19 clone LLNLR-276C11, complete sequence Length = 37107 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 5966 acatcctcttcctcctcctc 5947
>ref|NM_207313.1| Homo sapiens transmembrane protein 132E (TMEM132E), mRNA Length = 4369 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 3186 tcctcttcctcctcctcgtc 3167
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2535728 tcctcttcctcctcctcgtc 2535709
>emb|CR626422.1| full-length cDNA clone CS0DI060YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 711 acatcctcttcctcctcctc 692
>emb|CR625105.1| full-length cDNA clone CS0DG001YB07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1241 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 233 tcctcttcctcctcctcgtc 214
>emb|CR623550.1| full-length cDNA clone CS0DD001YI03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1313 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 475 acatcctcttcctcctcctc 456
>ref|NM_024658.3| Homo sapiens importin 4 (IPO4), mRNA Length = 3606 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2590 tcctcttcctcctcctcgtc 2571
>emb|CR618418.1| full-length cDNA clone CS0DB009YN12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1515 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 684 acatcctcttcctcctcctc 665
>dbj|AK095306.1| Homo sapiens cDNA FLJ37987 fis, clone CTONG2011429 Length = 3441 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2438 tcctcttcctcctcctcgtc 2419
>dbj|AK094897.1| Homo sapiens cDNA FLJ37578 fis, clone BRCOC2003732 Length = 3614 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2597 tcctcttcctcctcctcgtc 2578
>dbj|AK094107.1| Homo sapiens cDNA FLJ36788 fis, clone ADRGL2004451 Length = 3441 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2438 tcctcttcctcctcctcgtc 2419
>emb|CR611158.1| full-length cDNA clone CS0DC018YK03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1579 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acatcctcttcctcctcctc 90 |||||||||||||||||||| Sbjct: 763 acatcctcttcctcctcctc 744
>dbj|AK074743.1| Homo sapiens cDNA FLJ90262 fis, clone NT2RM4000965, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 1864 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 849 tcctcttcctcctcctcgtc 830
>dbj|AK057277.1| Homo sapiens cDNA FLJ32715 fis, clone TESTI2000784, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 3497 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcttcctcctcctcgtc 93 |||||||||||||||||||| Sbjct: 2494 tcctcttcctcctcctcgtc 2475 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,537,967 Number of Sequences: 3902068 Number of extensions: 1537967 Number of successful extensions: 456641 Number of sequences better than 10.0: 887 Number of HSP's better than 10.0 without gapping: 913 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 444776 Number of HSP's gapped (non-prelim): 11696 length of query: 95 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 74 effective length of database: 17,151,101,840 effective search space: 1269181536160 effective search space used: 1269181536160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)