ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58h08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016439.1| Zea mays clone Contig272 mRNA sequence Length = 1566 Score = 392 bits (198), Expect = e-106 Identities = 362/417 (86%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||||||| |||||||||| || |||||| ||||||| |||||||||||||| |||||| Sbjct: 257 tacaataatttgataaactatctgcttcagcaaggcatgactccttacatcaacctttac 316 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 ||||| ||||| |||||||| ||||||||||| |||||||| ||||||| || |||| | Sbjct: 317 cactatgatcttcctcttgcgcttgagaagaaatatggagggtggttaagcgcgaagatg 376 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || | ||| |||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 377 gcggacttgtttacagactatgctgacttctgttttaagacctacggcgatcgcgtaaag 436 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||| Sbjct: 437 cactggtttacattcaatgagccaaggatagtagcgctacttggctatgacacagggtca 496 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||||| ||||||| || |||| |||| |||||||| |||||||| ||||||||| Sbjct: 497 aatcctcctcaaaggtgcaccagatgcgctgctggtgggaattcagcaaccgaaccttac 556 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 || |||||||| ||||||||||| ||||| | | ||||||||||||||||||||| || Sbjct: 557 atagttgctcataattttctcttggcacatgctactgcagttgcaagataccggacgaaa 616 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggtacgag 417 |||||||| ||||||||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 617 tatcaggctgctcagaagggtaaggtcggaatagtcctggacttcaactggtacgag 673
>gb|AY109400.1| Zea mays CL1052_1 mRNA sequence Length = 2031 Score = 385 bits (194), Expect = e-104 Identities = 361/417 (86%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||||||| |||||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 254 tacaataatttgataaactatctgcttcagaaaggcatgactccttacatcaacctttac 313 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 ||||| ||||| |||||||| ||||||||||| |||||||| ||||||| || |||| | Sbjct: 314 cactatgatcttcctcttgcgcttgagaagaaatatggagggtggttaagcgcgaagatg 373 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || | ||| |||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 374 gcggacttgtttacagactatgctgacttctgttttaagacctacggcgatcgcgtaaag 433 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||| Sbjct: 434 cactggtttacattcaatgagccaaggatagtagcgctacttggctatgacacagggtca 493 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||||| ||||||| || ||| |||| |||||||| |||||||| |||||||| Sbjct: 494 aatcctcctcaaaggtgcaccagatgtgctgctggtgggaattcagcaacggaaccttat 553 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 ||||||||||| ||||||||||| ||||| | | |||||||||||||||||| || || Sbjct: 554 attgttgctcataattttctcttggcacatgctactgcagttgcaagataccgtacaaaa 613 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggtacgag 417 |||||||| ||||||||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 614 tatcaggctgctcagaagggtaaggtcggaatagtcctggacttcaactggtacgag 670
>ref|XM_469436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1849 Score = 361 bits (182), Expect = 1e-96 Identities = 355/413 (85%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 504 tacaacaatcttataaactaccttctgcagaaaggtatcactccttatgtcaatctttac 563 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | | Sbjct: 564 cactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatg 623 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || ||||| | || || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct: 624 gcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaag 683 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||| ||||| ||||||||||| || ||||||||||| ||| ||| | Sbjct: 684 cactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaaca 743 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||||| ||| Sbjct: 744 aatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatac 803 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 ||||||||||| |||||||||||| |||| | | || ||||||||||||||||| ||| Sbjct: 804 attgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaag 863 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 864 tatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 916
>gb|U28047.2|OSU28047 Oryza sativa beta-glucosidase mRNA, complete cds Length = 1909 Score = 361 bits (182), Expect = 1e-96 Identities = 355/413 (85%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 515 tacaacaatcttataaactaccttctgcagaaaggtatcactccttatgtcaatctttac 574 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | | Sbjct: 575 cactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatg 634 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || ||||| | || || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct: 635 gcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaag 694 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||| ||||| ||||||||||| || ||||||||||| ||| ||| | Sbjct: 695 cactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaaca 754 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||||| ||| Sbjct: 755 aatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatac 814 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 ||||||||||| |||||||||||| |||| | | || ||||||||||||||||| ||| Sbjct: 815 attgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaag 874 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 875 tatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 927
>dbj|AK105026.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H02, full insert sequence Length = 1846 Score = 361 bits (182), Expect = 1e-96 Identities = 355/413 (85%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 507 tacaacaatcttataaactaccttctgcagaaaggtatcactccttatgtcaatctttac 566 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | | Sbjct: 567 cactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatg 626 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || ||||| | || || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct: 627 gcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaag 686 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||| ||||| ||||||||||| || ||||||||||| ||| ||| | Sbjct: 687 cactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaaca 746 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||||| ||| Sbjct: 747 aatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatac 806 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 ||||||||||| |||||||||||| |||| | | || ||||||||||||||||| ||| Sbjct: 807 attgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaag 866 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 867 tatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 919
>dbj|AK100165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021K07, full insert sequence Length = 1894 Score = 361 bits (182), Expect = 1e-96 Identities = 355/413 (85%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 510 tacaacaatcttataaactaccttctgcagaaaggtatcactccttatgtcaatctttac 569 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | | Sbjct: 570 cactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatg 629 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || ||||| | || || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct: 630 gcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaag 689 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||| ||||| ||||||||||| || ||||||||||| ||| ||| | Sbjct: 690 cactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaaca 749 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||||| ||| Sbjct: 750 aatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatac 809 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 ||||||||||| |||||||||||| |||| | | || ||||||||||||||||| ||| Sbjct: 810 attgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaag 869 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 870 tatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 922
>dbj|AK103027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C01, full insert sequence Length = 1857 Score = 353 bits (178), Expect = 3e-94 Identities = 354/413 (85%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||| ||||| |||||||||||||| |||| ||| || |||||||| ||||||||||| Sbjct: 506 tacaacaatcttataaactaccttctgcagagaggtatcactccttatgtcaatctttac 565 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | | Sbjct: 566 cactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatg 625 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || ||||| | || || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct: 626 gcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaag 685 Query: 181 cactggtttacattcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcg 240 |||||||||||||| ||||| ||||||||||| || ||||||||||| ||| ||| | Sbjct: 686 cactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaaca 745 Query: 241 aatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttac 300 ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||||| ||| Sbjct: 746 aatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatac 805 Query: 301 attgttgctcacaattttctcttagcacacggttatgcagttgcaagataccggaccaag 360 ||||||||||| |||||||||||| |||| | | || ||||||||||||||||| ||| Sbjct: 806 attgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaag 865 Query: 361 tatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 866 tatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 918
>dbj|AK059920.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G08, full insert sequence Length = 1302 Score = 317 bits (160), Expect = 2e-83 Identities = 312/363 (85%) Strand = Plus / Plus Query: 51 caatctttaccactacgatctccctcttgcacttgagaagaagtatggaggctggttaaa 110 |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 1 caatctttaccactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaa 60 Query: 111 tgcaaagacggtgggactatttgcagactatgctgacttttgttttaagacctttggcga 170 |||||| | || || ||||| | || || || ||||| ||||| |||||||||||| | Sbjct: 61 tgcaaaaatggcggatctattcacggagtacgcggacttctgtttcaagacctttggcaa 120 Query: 171 tcgtgtaaagcactggtttacattcaatgaaccaaggatagttgcgcttcttggttacga 230 |||||| ||||||||||||||||| ||||| ||||||||||| || ||||||||||| || Sbjct: 121 tcgtgtcaagcactggtttacatttaatgagccaaggatagtagcacttcttggttatga 180 Query: 231 cgtagggtcgaatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaac 290 | ||| | ||||||||| | ||||||| |||||| |||| ||||||||||||||||| Sbjct: 181 ccaaggaacaaatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaac 240 Query: 291 agaaccttacattgttgctcacaattttctcttagcacacggttatgcagttgcaagata 350 |||||| |||||||||||||| |||||||||||| |||| | | || ||||||||||| Sbjct: 241 agaaccatacattgttgctcataattttctcttatcacatgctgcagctgttgcaagata 300 Query: 351 ccggaccaagtatcaggcagctcagaaggggaaggttggtatagttctggatttcaactg 410 |||||| |||||||||||||||||| | || || ||||| ||||||||||| ||||| || Sbjct: 301 ccggactaagtatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattg 360 Query: 411 gta 413 ||| Sbjct: 361 gta 363
>gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA sequence Length = 1023 Score = 293 bits (148), Expect = 2e-76 Identities = 174/183 (95%) Strand = Plus / Plus Query: 235 gggtcgaatcctcctcanaggtgcagcaaatgcactgccggtgggaactcagcaacagaa 294 ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| Sbjct: 8 gggtcgaatcctcctcagaggtgcagcaaatgcgctgccggtggcaactcagcaacagag 67 Query: 295 ccttacattgttgctcacaattttctcttagcacacggttatgcagttgcaagataccgg 354 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 68 ccttacatcgttgctcacaattttctcttagcacatggttatgcagttgcaagataccgg 127 Query: 355 accaagtatcaggcagctcagaaggggaaggttggtatagttctggatttcaactggtac 414 || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 128 actaagtatcaggcagctcagaaggggaaggttggaatagttctggacttcaactggtac 187 Query: 415 gag 417 ||| Sbjct: 188 gag 190
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 206 bits (104), Expect = 4e-50 Identities = 193/223 (86%) Strand = Plus / Minus Query: 145 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 204 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 83139 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 83080 Query: 205 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcanaggtgcagcaaa 264 |||||||| || ||||||||||| ||| ||| | ||||||||| | ||||||| ||| Sbjct: 83079 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 83020 Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 324 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 83019 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 82960 Query: 325 gcacacggttatgcagttgcaagataccggaccaagtatcagg 367 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 82959 tcacatgctgcagctgttgcaagataccggactaagtatcagg 82917 Score = 113 bits (57), Expect = 5e-22 Identities = 72/77 (93%) Strand = Plus / Minus Query: 40 actccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatgga 99 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 83615 actccttatgtcaatctttaccactacgatctccctcttgcgcttgagaagaagtacgga 83556 Query: 100 ggctggttaaatgcaaa 116 |||||||| |||||||| Sbjct: 83555 ggctggttgaatgcaaa 83539 Score = 79.8 bits (40), Expect = 6e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 42 tccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatggagg 101 ||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||||| ||| Sbjct: 92907 tccttacgtcaatctgaaccactacgatctcccacttgcacttcagaaaaagtatgaagg 92848 Query: 102 ctggttaa 109 |||||||| Sbjct: 92847 ctggttaa 92840 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 136 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 195 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 92391 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 92332 Query: 196 aatgaaccaaggatagt 212 ||||| ||||||||||| Sbjct: 92331 aatgagccaaggatagt 92315 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 92258 ctgccggtgggaactcagcaacagagccatatattgttgctca 92216 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1 tacaataatctgataaactaccttcttcagaaagg 35 ||||| ||||| |||||||||||||| |||||||| Sbjct: 83773 tacaacaatcttataaactaccttctgcagaaagg 83739 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 365 aggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 82666 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 82618
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 206 bits (104), Expect = 4e-50 Identities = 193/223 (86%) Strand = Plus / Minus Query: 145 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 204 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 27947411 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 27947352 Query: 205 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcanaggtgcagcaaa 264 |||||||| || ||||||||||| ||| ||| | ||||||||| | ||||||| ||| Sbjct: 27947351 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 27947292 Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 324 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 27947291 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 27947232 Query: 325 gcacacggttatgcagttgcaagataccggaccaagtatcagg 367 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 27947231 tcacatgctgcagctgttgcaagataccggactaagtatcagg 27947189 Score = 113 bits (57), Expect = 5e-22 Identities = 72/77 (93%) Strand = Plus / Minus Query: 40 actccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatgga 99 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 27947887 actccttatgtcaatctttaccactacgatctccctcttgcgcttgagaagaagtacgga 27947828 Query: 100 ggctggttaaatgcaaa 116 |||||||| |||||||| Sbjct: 27947827 ggctggttgaatgcaaa 27947811 Score = 79.8 bits (40), Expect = 6e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 42 tccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatggagg 101 ||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||||| ||| Sbjct: 27957179 tccttacgtcaatctgaaccactacgatctcccacttgcacttcagaaaaagtatgaagg 27957120 Query: 102 ctggttaa 109 |||||||| Sbjct: 27957119 ctggttaa 27957112 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 136 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 195 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 27956663 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 27956604 Query: 196 aatgaaccaaggatagt 212 ||||| ||||||||||| Sbjct: 27956603 aatgagccaaggatagt 27956587 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 27956530 ctgccggtgggaactcagcaacagagccatatattgttgctca 27956488 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1 tacaataatctgataaactaccttcttcagaaagg 35 ||||| ||||| |||||||||||||| |||||||| Sbjct: 27948045 tacaacaatcttataaactaccttctgcagaaagg 27948011 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 365 aggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 27946938 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 27946890
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 206 bits (104), Expect = 4e-50 Identities = 193/223 (86%) Strand = Plus / Plus Query: 145 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 204 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 77615 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 77674 Query: 205 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcanaggtgcagcaaa 264 |||||||| || ||||||||||| ||| ||| | ||||||||| | ||||||| ||| Sbjct: 77675 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 77734 Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 324 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 77735 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 77794 Query: 325 gcacacggttatgcagttgcaagataccggaccaagtatcagg 367 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 77795 tcacatgctgcagctgttgcaagataccggactaagtatcagg 77837 Score = 113 bits (57), Expect = 5e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 40 actccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatgga 99 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 77139 actccttatgtcaatctttaccactacgatctccctcttgcgcttgagaagaagtacgga 77198 Query: 100 ggctggttaaatgcaaa 116 |||||||| |||||||| Sbjct: 77199 ggctggttgaatgcaaa 77215 Score = 79.8 bits (40), Expect = 6e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 42 tccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatggagg 101 ||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||||| ||| Sbjct: 67847 tccttacgtcaatctgaaccactacgatctcccacttgcacttcagaaaaagtatgaagg 67906 Query: 102 ctggttaa 109 |||||||| Sbjct: 67907 ctggttaa 67914 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 136 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 195 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 68363 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 68422 Query: 196 aatgaaccaaggatagt 212 ||||| ||||||||||| Sbjct: 68423 aatgagccaaggatagt 68439 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 68496 ctgccggtgggaactcagcaacagagccatatattgttgctca 68538 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaagg 35 ||||| ||||| |||||||||||||| |||||||| Sbjct: 76981 tacaacaatcttataaactaccttctgcagaaagg 77015 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 365 aggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 78088 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 78136
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 206 bits (104), Expect = 4e-50 Identities = 193/223 (86%) Strand = Plus / Minus Query: 145 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 204 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 28038735 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 28038676 Query: 205 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcanaggtgcagcaaa 264 |||||||| || ||||||||||| ||| ||| | ||||||||| | ||||||| ||| Sbjct: 28038675 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 28038616 Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 324 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 28038615 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 28038556 Query: 325 gcacacggttatgcagttgcaagataccggaccaagtatcagg 367 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 28038555 tcacatgctgcagctgttgcaagataccggactaagtatcagg 28038513 Score = 113 bits (57), Expect = 5e-22 Identities = 72/77 (93%) Strand = Plus / Minus Query: 40 actccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatgga 99 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 28039211 actccttatgtcaatctttaccactacgatctccctcttgcgcttgagaagaagtacgga 28039152 Query: 100 ggctggttaaatgcaaa 116 |||||||| |||||||| Sbjct: 28039151 ggctggttgaatgcaaa 28039135 Score = 79.8 bits (40), Expect = 6e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 42 tccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatggagg 101 ||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||||| ||| Sbjct: 28048503 tccttacgtcaatctgaaccactacgatctcccacttgcacttcagaaaaagtatgaagg 28048444 Query: 102 ctggttaa 109 |||||||| Sbjct: 28048443 ctggttaa 28048436 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 136 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 195 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 28047987 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 28047928 Query: 196 aatgaaccaaggatagt 212 ||||| ||||||||||| Sbjct: 28047927 aatgagccaaggatagt 28047911 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 28047854 ctgccggtgggaactcagcaacagagccatatattgttgctca 28047812 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1 tacaataatctgataaactaccttcttcagaaagg 35 ||||| ||||| |||||||||||||| |||||||| Sbjct: 28039369 tacaacaatcttataaactaccttctgcagaaagg 28039335 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 365 aggcagctcagaaggggaaggttggtatagttctggatttcaactggta 413 ||||||||||| | || || ||||| ||||||||||| ||||| ||||| Sbjct: 28038262 aggcagctcagcaaggcaaagttggaatagttctggacttcaattggta 28038214
>ref|XM_469437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 806 Score = 188 bits (95), Expect = 1e-44 Identities = 173/199 (86%) Strand = Plus / Plus Query: 1 tacaataatctgataaactaccttcttcagaaaggcattactccttacatcaatctttac 60 ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 608 tacaacaatcttataaactaccttctgcagaaaggtatcactccttatgtcaatctttac 667 Query: 61 cactacgatctccctcttgcacttgagaagaagtatggaggctggttaaatgcaaagacg 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | | Sbjct: 668 cactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatg 727 Query: 121 gtgggactatttgcagactatgctgacttttgttttaagacctttggcgatcgtgtaaag 180 | || ||||| | || || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct: 728 gcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaag 787 Query: 181 cactggtttacattcaatg 199 |||||||||||||| |||| Sbjct: 788 cactggtttacatttaatg 806
>ref|XM_469438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2080 Score = 117 bits (59), Expect = 3e-23 Identities = 143/171 (83%) Strand = Plus / Plus Query: 42 tccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatggagg 101 ||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||||| ||| Sbjct: 560 tccttacgtcaatctgaaccactacgatctcccacttgcacttcagaaaaagtatgaagg 619 Query: 102 ctggttaaatgcaaagacggtgggactatttgcagactatgctgacttttgttttaagac 161 |||||||| |||| | || || ||||| | ||||||||||| |||||||| ||||| Sbjct: 620 ctggttaagcccaaaaattgttggtgtattttcggactatgctgagttttgtttcaagac 679 Query: 162 ctttggcgatcgtgtaaagcactggtttacattcaatgaaccaaggatagt 212 | ||||||||| || ||| |||||||||| || ||||| ||||||||||| Sbjct: 680 atatggcgatcgagtcaagaactggtttacgtttaatgagccaaggatagt 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 787 ctgccggtgggaactcagcaacagagccatatattgttgctca 829
>dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011K21, full insert sequence Length = 2082 Score = 117 bits (59), Expect = 3e-23 Identities = 143/171 (83%) Strand = Plus / Plus Query: 42 tccttacatcaatctttaccactacgatctccctcttgcacttgagaagaagtatggagg 101 ||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||||| ||| Sbjct: 562 tccttacgtcaatctgaaccactacgatctcccacttgcacttcagaaaaagtatgaagg 621 Query: 102 ctggttaaatgcaaagacggtgggactatttgcagactatgctgacttttgttttaagac 161 |||||||| |||| | || || ||||| | ||||||||||| |||||||| ||||| Sbjct: 622 ctggttaagcccaaaaattgttggtgtattttcggactatgctgagttttgtttcaagac 681 Query: 162 ctttggcgatcgtgtaaagcactggtttacattcaatgaaccaaggatagt 212 | ||||||||| || ||| |||||||||| || ||||| ||||||||||| Sbjct: 682 atatggcgatcgagtcaagaactggtttacgtttaatgagccaaggatagt 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 789 ctgccggtgggaactcagcaacagagccatatattgttgctca 831
>dbj|AK105850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G08, full insert sequence Length = 1387 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 136 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 195 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 39 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 98 Query: 196 aatgaaccaaggatagt 212 ||||| ||||||||||| Sbjct: 99 aatgagccaaggatagt 115 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctca 311 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 172 ctgccggtgggaactcagcaacagagccatatattgttgctca 214
>dbj|AK059517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C01, full insert sequence Length = 1336 Score = 65.9 bits (33), Expect = 1e-07 Identities = 117/145 (80%) Strand = Plus / Plus Query: 269 ctgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctcttagcac 328 ||||||||||||||||||||||||| || || ||||||||||| ||| | ||||| | | Sbjct: 43 ctgccggtgggaactcagcaacagagccatatattgttgctcataatatcatcttatctc 102 Query: 329 acggttatgcagttgcaagataccggaccaagtatcaggcagctcagaaggggaaggttg 388 | | | |||||||| |||||||| | ||||| |||||| |||||| || ||||| | Sbjct: 103 atgctactgcagttgatagataccgtaacaagttccaggcaagtcagaaaggcaaggtcg 162 Query: 389 gtatagttctggatttcaactggta 413 | |||||||| ||||| || ||||| Sbjct: 163 gaatagttctcgattttaattggta 187
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 277 gggaactcagcaacagaaccttacattgttgctcacaat 315 ||||||||||| || |||||||||||||||||||||||| Sbjct: 135726 gggaactcagctactgaaccttacattgttgctcacaat 135764
>gb|DQ289594.1| Oncidium Gower Ramsey beta-mannosidase 2 mRNA, complete cds Length = 1669 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 324 |||||||| ||||| ||||| | |||||||||||||||||||| |||||| || ||||| Sbjct: 678 tgcactgcaggtggcaactcgactacagaaccttacattgttgcccacaatcttatctta 737 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 133 gcagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttaca 192 ||||| ||||| || ||||||||||| || ||||| || | || ||| ||||||||||| Sbjct: 546 gcagattatgcagaattttgttttaaaacatttggagacagggtgaagaactggtttaca 605 Query: 193 ttcaatgaaccaagg 207 || |||||||||||| Sbjct: 606 tttaatgaaccaagg 620
>gb|DQ289595.1| Oncidium Gower Ramsey beta-mannosidase 1 mRNA, complete cds Length = 1700 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaat 315 |||||||| ||||| ||||| | |||||||||||||||||||| |||||| Sbjct: 709 tgcactgctggtggcaactctactacagaaccttacattgttgcccacaat 759 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 133 gcagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttaca 192 ||||| ||||| || ||||||||||| || ||||| || | || ||| ||||||||||| Sbjct: 577 gcagattatgcagaattttgttttaaaacatttggagacagggtgaagaactggtttaca 636 Query: 193 ttcaatgaaccaagg 207 || |||||||||||| Sbjct: 637 tttaatgaaccaagg 651
>gb|DQ289593.1| Oncidium Gower Ramsey beta-mannosidase 3 mRNA, complete cds Length = 1639 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 265 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaat 315 |||||||| ||||| ||||| | |||||||||||||||||||| |||||| Sbjct: 648 tgcactgctggtggcaactctactacagaaccttacattgttgcccacaat 698 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 133 gcagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttaca 192 ||||| ||||| || ||||||||||| || ||||| || | || ||| ||||||||||| Sbjct: 516 gcagattatgcagaattttgttttaaaacatttggagacagggtgaagaactggtttaca 575 Query: 193 ttcaatgaaccaagg 207 || |||||||||||| Sbjct: 576 tttaatgaaccaagg 590
>gb|U26025.2| Prunus serotina amygdalin hydrolase isoform AH I precursor (AH1) mRNA, complete cds Length = 1915 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 135 agactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactgg 186 ||||||||| || |||||||||||| ||||||||||| ||||| |||||| Sbjct: 590 agactatgcaaacctttgttttaagaaatttggcgatcgagtaaaacactgg 641
>gb|AF414606.1|AF414606 Prunus serotina amygdalin hydrolase isoform AH I precursor (AH1) gene, partial cds Length = 3373 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 135 agactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactgg 186 ||||||||| || |||||||||||| ||||||||||| ||||| |||||| Sbjct: 1577 agactatgcaaacctttgttttaagaaatttggcgatcgagtaaaacactgg 1628
>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence Length = 213778 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 ctatgctgacttttgttttaagacctttgg 167 |||||| ||||| ||||||||||||||||| Sbjct: 32631 ctatgcggacttctgttttaagacctttgg 32660
>ref|XM_975593.1| PREDICTED: Mus musculus lactase (Lct), mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 ctatgctgacttttgttttaagacctttgg 167 |||||| ||||| ||||||||||||||||| Sbjct: 3156 ctatgcggacttctgttttaagacctttgg 3185
>ref|XM_914093.2| PREDICTED: Mus musculus lactase (Lct), mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 ctatgctgacttttgttttaagacctttgg 167 |||||| ||||| ||||||||||||||||| Sbjct: 3156 ctatgcggacttctgttttaagacctttgg 3185
>ref|XM_129479.6| PREDICTED: Mus musculus lactase (Lct), mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 ctatgctgacttttgttttaagacctttgg 167 |||||| ||||| ||||||||||||||||| Sbjct: 3156 ctatgcggacttctgttttaagacctttgg 3185
>gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome 1, complete sequence Length = 182578 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 138 ctatgctgacttttgttttaagacctttgg 167 |||||| ||||| ||||||||||||||||| Sbjct: 68194 ctatgcggacttctgttttaagacctttgg 68165
>dbj|AK158042.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930020G04 product:Rat lactase-phlorizin hydrolase (Fragment) homolog [Rattus norvegicus], full insert sequence Length = 3660 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 ctatgctgacttttgttttaagacctttgg 167 |||||| ||||| ||||||||||||||||| Sbjct: 1258 ctatgcggacttctgttttaagacctttgg 1287
>gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, complete sequence Length = 205639 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 taaactaccttcttcagaaag 34 ||||||||||||||||||||| Sbjct: 66958 taaactaccttcttcagaaag 66938
>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8, complete sequence Length = 130762 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 atctccctcttgcacttgaga 88 ||||||||||||||||||||| Sbjct: 81528 atctccctcttgcacttgaga 81508
>emb|AL772193.5| Zebrafish DNA sequence from clone CH211-194C5 in linkage group 7 Contains a novel gene similar to PPP1R14B (protein phosphatase 1, regulatory (inhibitor) subunit 14B), a novel gene similar to BRMS1 (breast cancer metastasis-suppressor 1 (BRMS1), the pc gene for pyruvate carboxylase and three putative novel retrotransposons, complete sequence Length = 192531 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 atctccctcttgcacttgaga 88 ||||||||||||||||||||| Sbjct: 88762 atctccctcttgcacttgaga 88742
>emb|BX255928.7| Zebrafish DNA sequence from clone DKEY-257P9 in linkage group 25, complete sequence Length = 132833 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 atctccctcttgcacttgaga 88 ||||||||||||||||||||| Sbjct: 8454 atctccctcttgcacttgaga 8474
>gb|AC092615.3| Homo sapiens BAC clone RP11-204D19 from 2, complete sequence Length = 180346 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gctgacttttgttttaagacc 162 ||||||||||||||||||||| Sbjct: 103121 gctgacttttgttttaagacc 103101
>gb|U95298.1|MEU95298 Manihot esculenta linamarase (pLIN-GEN) gene, complete cds Length = 2782 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 actcagcaacagaaccttacattgttgctcacaattt 317 ||||||| |||||||||||||| ||||| || ||||| Sbjct: 1281 actcagctacagaaccttacatagttgcccataattt 1317
>gb|BC043504.1| Homo sapiens IQ motif containing with AAA domain, mRNA (cDNA clone MGC:49940 IMAGE:5193742), complete cds Length = 3250 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttcttcagaaaggcattact 42 |||||||||||||||||||| Sbjct: 2699 ttcttcagaaaggcattact 2680
>ref|NM_024726.3| Homo sapiens IQ motif containing with AAA domain (IQCA), mRNA Length = 3250 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttcttcagaaaggcattact 42 |||||||||||||||||||| Sbjct: 2699 ttcttcagaaaggcattact 2680
>emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on chromosome 10 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 220225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ctggtttacattcaatgaac 202 |||||||||||||||||||| Sbjct: 27697 ctggtttacattcaatgaac 27678
>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete sequence Length = 182025 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 acttttgttttaagaccttt 165 |||||||||||||||||||| Sbjct: 147237 acttttgttttaagaccttt 147256
>gb|BC028699.1| Homo sapiens IQ motif containing with AAA domain, mRNA (cDNA clone MGC:26789 IMAGE:4839325), complete cds Length = 3421 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttcttcagaaaggcattact 42 |||||||||||||||||||| Sbjct: 2853 ttcttcagaaaggcattact 2834
>gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, complete sequence Length = 139770 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 acttttgttttaagaccttt 165 |||||||||||||||||||| Sbjct: 41202 acttttgttttaagaccttt 41183
>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence Length = 189308 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 atagttctggatttcaactg 410 |||||||||||||||||||| Sbjct: 113200 atagttctggatttcaactg 113219
>ref|XM_686254.1| PREDICTED: Danio rerio similar to LOC407679 protein (LOC562885), mRNA Length = 4161 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 accaagtatcaggcagctcagaag 378 |||||||| ||||||||||||||| Sbjct: 1567 accaagtaccaggcagctcagaag 1590
>emb|BX649325.3| Zebrafish DNA sequence from clone DKEY-81F9 in linkage group 24, complete sequence Length = 169135 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 accaagtatcaggcagctcagaag 378 |||||||| ||||||||||||||| Sbjct: 26099 accaagtaccaggcagctcagaag 26122
>gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, complete sequence Length = 131359 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttcttcagaaaggcattact 42 |||||||||||||||||||| Sbjct: 105728 ttcttcagaaaggcattact 105747
>dbj|AK026180.1| Homo sapiens cDNA: FLJ22527 fis, clone HRC12820 Length = 1608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttcttcagaaaggcattact 42 |||||||||||||||||||| Sbjct: 24 ttcttcagaaaggcattact 5
>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184984 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 acttttgttttaagaccttt 165 |||||||||||||||||||| Sbjct: 150197 acttttgttttaagaccttt 150216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,499,262 Number of Sequences: 3902068 Number of extensions: 3499262 Number of successful extensions: 59502 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59362 Number of HSP's gapped (non-prelim): 130 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
